RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STT3A (Homo sapiens)

Ensembl gene IDs: ENSG00000134910

Ensembl transcript IDs: ENST00000392708.9, ENST00000524639.5, ENST00000525431.1, ENST00000525652.5, ENST00000525946.5, ENST00000526213.5, ENST00000526364.1, ENST00000526726.1, ENST00000527456.1, ENST00000527606.5, ENST00000529196.5, ENST00000529886.1, ENST00000531001.1, ENST00000531491.5, ENST00000531599.1, ENST00000534472.5, ENST00000649491.1

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGCAACACATAGGCTAAGACTAAGGGAAAAAGAAGCTCACCTTTaGACAACCACAAGAGTTTTGAGTAAAGGGTCATTCCTGTGTCAT +
Preference number: 1 (lower is better)
Translates to: TATHRLRLREKEAHL*TTTRVLSKGSFLCH
Trigger: ATGACACAGGAATGACCCTTTACTCAAAACTCTTGTGGTTGTTCAAAGGTGAGCTTCTTTTTCCCTTAGTCTTAGCCTATGTGTTGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR CCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTaGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATC +
Preference number: 1 (lower is better)
Translates to: AKSHPQLKNMVYKLV*KAKCPGYTNIQQHI
Trigger: GATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR TCA 90 bp TTACATATAGTAAATCAAATCTTGAGGCTAAATCTCACCCACAGTTaGAGAACATGGTATATAAATTGGTTTGGAAGGCTAAGTGCCCTG +
Preference number: 1 (lower is better)
Translates to: LHIVNQILRLNLTHS*RTWYINWFGRLSAL
Trigger: CAGGGCACTTAGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGCCTCAAGATTTGATTTACTATATGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCTGGCCCAGCCCATACTaGCCAAGACAAAACTTCCAG +
Preference number: 2 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFWPSPY*PRQNFQ
Trigger: CTGGAAGTTTTGTCTTGGGCAGTATGGGCTGGGCCA...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTCAGGCAGGCTGGCACTaGTCTCTAGGGACCTGTTAC +
Preference number: 2 (lower is better)
Translates to: WFGRLSALAIQIYNSISLQAGWH*SLGTCY
Trigger: GTAACAGGTCCCTAGAGAGCAGTGCCAGCCTGCCTG...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTTGGCCCAGCCCATACTaGCCAAGACAAAACTTCCAG +
Preference number: 2 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKAWPSPY*PRQNFQ
Trigger: CTGGAAGTTTTGTCTTGGGCAGTATGGGCTGGGCCA...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CCA 90 bp AGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGCTGCTTATGTCCTTCTaGCAGCCTAGCATAGCTTTT +
Preference number: 2 (lower is better)
Translates to: SALAIQIYNSISLRSTTMLLMSF*QPSIAF
Trigger: AAAAGCTATGCTAGGCTGCCAGAAGGACATAAGCAG...CATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp AGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGAAAGAAGCTCACCTTTaGACAACCACAAGAGTTTTG +
Preference number: 2 (lower is better)
Translates to: SALAIQIYNSISLRSTTMKEAHL*TTTRVL
Trigger: CAAAACTCTTGTGGTTGTTCAAAGGTGAGCTTCTTT...CATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTGTCCTAAATGTGATGTaGTCAGTGCGAAGCATATCA +
Preference number: 2 (lower is better)
Translates to: WFGRLSALAIQIYNSISLVLNVM*SVRSIS
Trigger: TGATATGCTTCGCACTGAGCACATCACATTTAGGAC...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAAAAATCATTTCATTTaGCCCAGCCCATACTGCCCA +
Preference number: 2 (lower is better)
Translates to: WFGRLSALAIQIYNSISLKNHFI*PSPYCP
Trigger: TGGGCAGTATGGGCTGGGCCAAATGAAATGATTTTT...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTAGAATGGACAAGGTCTaGTTATGTCCTTCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSRMDKV*LCPSGS
Trigger: GCTGCCAGAAGGACATAAGCAGACCTTGTCCATTCT...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTTTTCACTGTTTGTCTTaGGTCTTCAAAACTGCTGAT +
Preference number: 2 (lower is better)
Translates to: WFGRLSALAIQIYNSISLFHCLS*VFKTAD
Trigger: ATCAGCAGTTTTGAAGACTCAAGACAAACAGTGAAA...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATCAACCACAAGAGTTTTaGGTAAAGGGTCATTCCTGT +
Preference number: 2 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNQPQEF*VKGHSC
Trigger: ACAGGAATGACCCTTTACTCAAAACTCTTGTGGTTG...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATGTCCTAAATGTGATGTaGTCAGTGCGAAGCATATCA +
Preference number: 2 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNVLNVM*SVRSIS
Trigger: TGATATGCTTCGCACTGAGCACATCACATTTAGGAC...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTCCTCAAGGACCACTGTaGTTCCCAGTTAAATTGTTT +
Preference number: 2 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKAPQGPL*FPVKLF
Trigger: AAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGG...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTAAAAATCATTTCATTTaGCCCAGCCCATACTGCCCA +
Preference number: 2 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKAKNHFI*PSPYCP
Trigger: TGGGCAGTATGGGCTGGGCCAAATGAAATGATTTTT...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTAGGGAGCTAAGAGAATaGACAAGGTCTGCTTATGTC +
Preference number: 2 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSRELRE*TRSAYV
Trigger: GACATAAGCAGACCTTGTCCATTCTCTTAGCTCCCT...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp TCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCTGTTCTTTCACTGTTTGTCTTaGGTCTTCAAAACTGCTGAT +
Preference number: 2 (lower is better)
Translates to: SLRSTTMTNLKVMQFLLFFHCLS*VFKTAD
Trigger: ATCAGCAGTTTTGAAGACTCAAGACAAACAGTGAAA...GAACAGGAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp TCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCTGTTCTTCAAAAACACCTACTaGCCATCAAGCTCTATATGT +
Preference number: 2 (lower is better)
Translates to: SLRSTTMTNLKVMQFLLFFKNTY*PSSSIC
Trigger: ACATATAGAGCTTGATGGTCAGTAGGTGTTTTTGAA...GAACAGGAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCAAAGAAGCTCACCTTTaGACAACCACAAGAGTTTTG +
Preference number: 2 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLKEAHL*TTTRVL
Trigger: CAAAACTCTTGTGGTTGTTCAAAGGTGAGCTTCTTT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCAATTGTACTAGGTGCTaGAATGCAAAGGGTTATGAC +
Preference number: 2 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLNCTRC*NAKGYD
Trigger: GTCATAACCCTTTGCATTGCAGCACCTAGTACAATT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR GCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTAGGAATTGTACTAGGTaGTGCAATGCAAAGGGTTAT +
Preference number: 2 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKARNCTR*CNAKGY
Trigger: ATAACCCTTTGCATTGCAGCACCTAGTACAATTCCT...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTCTGCTTATGTCCTTCTaGCAGCCTAGCATAGCTTTT +
Preference number: 2 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFLLMSF*QPSIAF
Trigger: AAAAGCTATGCTAGGCTGCCAGAAGGACATAAGCAG...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATCTTCTAGCACTCTTCTaGTCCCACATTTATTCATTC +
Preference number: 2 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNLLALF*SHIYSF
Trigger: GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAG...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCTTCAAAAACACCTACTaGCCATCAAGCTCTATATGT +
Preference number: 2 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLFKNTY*PSSSIC
Trigger: ACATATAGAGCTTGATGGTCAGTAGGTGTTTTTGAA...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR TCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTGTCATTCCTGTGTCATaGATAAGTGAGAGTACTGAA +
Preference number: 2 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSVIPVS*ISESTE
Trigger: TTCAGTACTCTCACTTATTCATGACACAGGAATGAC...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR CAA 90 bp CTTACATATAGTAAATCAAATCTTGAGGCTAAATCTCACCCACAGTaGAAGAACATGGTATATAAATTGGTTTGGAAGGCTAAGTGCCCT +
Preference number: 2 (lower is better)
Translates to: LTYSKSNLEAKSHPQ*KNMVYKLVWKAKCP
Trigger: AGGGCACTTAGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGCCTCAAGATTTGATTTACTATATGTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR-3UTR CAA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTACAACCACAAGAGTTTaGAGTAAAGGGTCATTCCTG +
Preference number: 3 (lower is better)
Translates to: WFGRLSALAIQIYNSISLTTTRV*SKGSFL
Trigger: CAGGAATGACCCTTTACTCAAAACTCTTGTGGTTGT...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR TCA 72 bp GCCCATACTGCCCAAGACAAAACTTCCAGACAATTCTaGTGCCATCCAGTTTTGTTCTTACAAACTGCATAT +
Preference number: 3 (lower is better)
Translates to: AHTAQDKTSRQF*CHPVLFLQTAY
Trigger: ATATGCAGTTTGTAAGAACAAAACTGGATGGCATCAGAATTGTCTGGAAGTTTTGTCTTGGGCAGTATGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR TCA 72 bp CATAGGCTAAGACTAAGGGAAAAAGAAGCTCACCTTTaGACAACCACAAGAGTTTTGAGTAAAGGGTCATTC +
Preference number: 3 (lower is better)
Translates to: HRLRLREKEAHL*TTTRVLSKGSF
Trigger: GAATGACCCTTTACTCAAAACTCTTGTGGTTGTTCAAAGGTGAGCTTCTTTTTCCCTTAGTCTTAGCCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR CCA 72 bp CACCCACAGTTGAAGAACATGGTATATAAATTGGTTTaGAAGGCTAAGTGCCCTGGCTATACAAATATACAA +
Preference number: 3 (lower is better)
Translates to: HPQLKNMVYKLV*KAKCPGYTNIQ
Trigger: TTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR TCA 72 bp GTAAATCAAATCTTGAGGCTAAATCTCACCCACAGTTaGAGAACATGGTATATAAATTGGTTTGGAAGGCTA +
Preference number: 3 (lower is better)
Translates to: VNQILRLNLTHS*RTWYINWFGRL
Trigger: TAGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGCCTCAAGATTTGATTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR GCA 72 bp CTTTGTCCTGATATTAAATGTCCTCAAGGACCACTGTaGTTCCCAGTTAAATTGTTTTTGTTTAGACAAGAT +
Preference number: 3 (lower is better)
Translates to: LCPDIKCPQGPL*FPVKLFLFRQD
Trigger: ATCTTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTTAATATCAGGACAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAGAGAGAAACGGCCTGTaGGCATCAGCACGAGGACGT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTERNGL*ASARGR
Trigger: ACGTCCTCGTGCTGATGCTCACAGGCCGTTTCTCTC...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGGAGAGCTCCCACGGTaGGAAGGACAAAGCCTACCA +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVGELPR*EGQSLP
Trigger: TGGTAGGCTTTGTCCTTCTCACCGTGGGAGCTCTCC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGACCAGGTTGTGGGCTaGTGCTCAGACACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDDQVVG*CSDTEA
Trigger: TGCTTCTGTGTCTGAGCATCAGCCCACAACCTGGTC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAATCCCACCAGGACATaGCCTTCGCATCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDNPTRT*PSHPLE
Trigger: CTCCAGAGGATGCGAAGGTCATGTCCTGGTGGGATT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGCAGTTGAGCAGCACTaGAGAACCTTCACGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDAVEQH*RTFTVH
Trigger: GTGGACCGTGAAGGTTCTCCAGTGCTGCTCAACTGC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGACACGGTCAAAGCCTaGAGGACGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDDTVKA*RTLGFC
Trigger: ACAGAAGCCAAGCGTCCTCCAGGCTTTGACCGTGTC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGCAACCTCCACCTCCTaGGCAATTCTCATGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDATSTS*AILMPQ
Trigger: CTGAGGCATGAGAATTGCCCAGGAGGTGGAGGTTGC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACCAGCAAACAGACGAGTaGAGAAGGCTGGCCGGCTTT +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDQQTDE*RRLAGF
Trigger: AAAGCCGGCCAGCCTTCTCCACTCGTCTGTTTGCTG...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531491.5
CDS-3UTR TCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCGAGAGAAACGGCCTGTaGGCATCAGCACGAGGACGT +
Preference number: 4 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFERNGL*ASARGR
Trigger: ACGTCCTCGTGCTGATGCTCACAGGCCGTTTCTCTC...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAGGCCAACTGGAAACATaGAGACGAGGAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTGQLET*RRGAAG
Trigger: ACCTGCAGCTCCTCGTCTTCATGTTTCCAGTTGGCC...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTAATCCCACCAGGACATaGCCTTCGCATCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRNPTRT*PSHPLE
Trigger: CTCCAGAGGATGCGAAGGTCATGTCCTGGTGGGATT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACCTCTGTGGACGCCATTaGCTGCCCTACTCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDLCGRH*LPYSRN
Trigger: ATTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAG...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGTTTGCCTGTATCTGTaGTCCCTCCAATCCGGACCA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDVCLYL*SLQSGP
Trigger: TGGTCCGGATTGGAGGGAGCACAGATACAGGCAAAC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATGAGGACCAGGTTGTaGGCTGATGCTCAGACACAG +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDMRTRL*ADAQTQ
Trigger: CTGTGTCTGAGCATCAGCCCACAACCTGGTCCTCAT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAGACACGGTCAAAGCCTaGAGGACGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTDTVKA*RTLGFC
Trigger: ACAGAAGCCAAGCGTCCTCCAGGCTTTGACCGTGTC...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGGAGAGCTCCCACGGTaGGAAGGACAAAGCCTACCA +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGGELPR*EGQSLP
Trigger: TGGTAGGCTTTGTCCTTCTCACCGTGGGAGCTCTCC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTAAGAAGCCCAGCCCCTaGATCCTTGAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRKKPSP*ILELFG
Trigger: ACCAAAGAGCTCAAGGATGCAGGGGCTGGGCTTCTT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAGGGCACACTTAGCTaGCCAACAGATGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDKGTLS*PTDGTS
Trigger: ACTGGTTCCATCTGTTGGGCAGCTAAGTGTGCCCTT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGCTCTGTGGACGCCATTaGCTGCCCTACTCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVLCGRH*LPYSRN
Trigger: ATTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAG...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAGGCAGGCTGGCACTaGTCTCTAGGGACCTGTTAC +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGQAGWH*SLGTCY
Trigger: GTAACAGGTCCCTAGAGAGCAGTGCCAGCCTGCCTG...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGCCTGGGCAATTCTCATaGCTCAGCCTCCCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: SALAIQIYNSISLRSTTMPGQFS*LSLPSS
Trigger: GCTACTGGGGAGGCTGAGGCATGAGAATTGCCCAGG...CATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR CCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGATGAGGACCAGGTTGTaGGCTGATGCTCAGACACAG +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVMRTRL*ADAQTQ
Trigger: CTGTGTCTGAGCATCAGCCCACAACCTGGTCCTCAT...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGTATGTGGACAGCACCTaGGAGACTCCAATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVYVDST*ETPMPE
Trigger: CTCTGGCATTGGAGTCTCCCAGGTGCTGTCCACATA...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAGGCTTTTTCCTCTGTaGACGCCATTGCCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTRLFPL*TPLPAL
Trigger: TAGGGCAGGCAATGGCGTCCACAGAGGAAAAAGCCT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAGCCTGGAGGACGCTTaGCTTCTGTGTAAACCTGTC +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTSLEDA*LLCKPV
Trigger: GACAGGTTTACACAGAAGCCAAGCGTCCTCCAGGCT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACTTTGCAGCTGTTTTCTaGAATGCCTGGCCGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDFAAVF*NAWPAF
Trigger: GAAAGCCGGCCAGGCATTCCAGAAAACAGCTGCAAA...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTACGAGTGGAGAAGGCTaGCCGGCTTTCCTAAACGAT +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRTSGEG*PAFLND
Trigger: ATCGTTTAGGAAAGCCGGCCAGCCTTCTCCACTCGT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531491.5
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGAGAAACGGCCTGTaGGCATCAGCACGAGGACGT +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELERNGL*ASARGR
Trigger: ACGTCCTCGTGCTGATGCTCACAGGCCGTTTCTCTC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAGCCTACCAGAGAGATaGCGCTCCGGAAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTSLPER*RSGKEL
Trigger: AAGTTCTTTTCCGGAGCGTCATCTCTCTGGTAGGCT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTAGCCTACCAGAGAGATaGCGCTCCGGAAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRSLPER*RSGKEL
Trigger: AAGTTCTTTTCCGGAGCGTCATCTCTCTGGTAGGCT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGGAGAGCTCCCACGGTaGGAAGGACAAAGCCTACCA +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELGELPR*EGQSLP
Trigger: TGGTAGGCTTTGTCCTTCTCACCGTGGGAGCTCTCC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTCAGGTCAAAATAGTATaGGGACCAGGTTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRQVKIV*GPGCGL
Trigger: CAGCCCACAACCTGGTCCTCATACTATTTTGACCTG...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACCATCGAGCTCCCTCATaGTCTCATAGGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDHRAPS*SHRLFP
Trigger: AGGAAAAAGCCTATGAGATCATGAGGGAGCTCGATG...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAAGAAGCCCAGCCCCTaGATCCTTGAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDKKPSP*ILELFG
Trigger: ACCAAAGAGCTCAAGGATGCAGGGGCTGGGCTTCTT...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGAAGGGCACACTTAGCTaGCCAACAGATGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVKGTLS*PTDGTS
Trigger: ACTGGTTCCATCTGTTGGGCAGCTAAGTGTGCCCTT...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCTCTGTGGACGCCATTaGCTGCCCTACTCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDLCGRH*LPYSRN
Trigger: ATTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAG...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTTTGCCTGTATCTGTaGTCCCTCCAATCCGGACCA +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDVCLYL*SLQSGP
Trigger: TGGTCCGGATTGGAGGGAGCACAGATACAGGCAAAC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTACAAAGGCATGGATCTaGCAGAGACCAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRTKAWI*QRPKTP
Trigger: TGGGGTCTTTGGTCTCTGCCAGATCCATGCCTTTGT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGATTCTTCATGTATGTaGACAGCACCTGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDDSSCM*TAPGRL
Trigger: GAGTCTCCCAGGTGCTGTCCACATACATGAAGAATC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAGAGTAGGCCTCACTaGTCACCCAGGTTGAATGAA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDKSRPH*SPRLNE
Trigger: TTCATTCAACCTGGGTGACCAGTGAGGCCTACTCTT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAGGGCAGATAGTACAATaGACGGAGAAGAGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTGQIVQ*TEKSRP
Trigger: AGGCCTACTCTTCTCCGTCCATTGTACTATCTGCCC...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGACCTTCGCATCCTCTaGAGTATTATGACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDDLRIL*SIMTKP
Trigger: TGGCTTCGTCATAATACTCCAGAGGATGCGAAGGTC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAGGCTTTTTCCTCTGTaGACGCCATTGCCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDRLFPL*TPLPAL
Trigger: TAGGGCAGGCAATGGCGTCCACAGAGGAAAAAGCCT...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGCAGTTGAGCAGCACTaGAGAACCTTCACGGTCCAC +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGAVEQH*RTFTVH
Trigger: GTGGACCGTGAAGGTTCTCCAGTGCTGCTCAACTGC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAGCCTGGAGGACGCTTaGCTTCTGTGTAAACCTGTC +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDSLEDA*LLCKPV
Trigger: GACAGGTTTACACAGAAGCCAAGCGTCCTCCAGGCT...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTTTCTTGCAGGCAGGCTaGCACTGCTCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLFLQAG*HCSLGT
Trigger: GGTCCCTAGAGAGCAGTGCCAGCCTGCCTGCAAGAA...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCTGGTCTTGAACTCCTaGGCTCAAGTGATCCGCATG +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDLVLNS*AQVIRM
Trigger: CATGCGGATCACTTGAGCCCAGGAGTTCAAGACCAG...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCAGGTTGGAGTGCAGTaGCATGATGTCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDQVGVQ*HDVCSL
Trigger: CAGTGAGCAGACATCATGCCACTGCACTCCAACCTG...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR TCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACTCCACATGTAGTAGGTaGGTAGCATGCAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDSTCSR*VACKRW
Trigger: CCATCTTTTGCATGCTACTCACCTACTACATGTGGA...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp TCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCTGTTCGAGAGAAACGGCCTGTaGGCATCAGCACGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SLRSTTMTNLKVMQFLLFERNGL*ASARGR
Trigger: ACGTCCTCGTGCTGATGCTCACAGGCCGTTTCTCTC...GAACAGGAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAGCCTACCAGAGAGATaGCGCTCCGGAAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDSLPER*RSGKEL
Trigger: AAGTTCTTTTCCGGAGCGTCATCTCTCTGGTAGGCT...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTGACCAGGTTGTGGGCTaGTGCTCAGACACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLDQVVG*CSDTEA
Trigger: TGCTTCTGTGTCTGAGCATCAGCCCACAACCTGGTC...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGGCCAACTGGAAACATaGAGACGAGGAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELGQLET*RRGAAG
Trigger: ACCTGCAGCTCCTCGTCTTCATGTTTCCAGTTGGCC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGGAAGTCATCAAATATaGTCCTACTGCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVGSHQI*SYCHPH
Trigger: GTGGGGATGGCAGTAGGATCATATTTGATGACTTCC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGAATCCCACCAGGACATaGCCTTCGCATCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELNPTRT*PSHPLE
Trigger: CTCCAGAGGATGCGAAGGTCATGTCCTGGTGGGATT...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACTTACCTTGTATATCCTaGCCAGCCAATGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDLPCIS*PANVLW
Trigger: CCACAGAACATTGGCTGGTCAGGATATACAAGGTAA...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAAAGAAGCCCAGCCCCTaGATCCTTGAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGKKPSP*ILELFG
Trigger: ACCAAAGAGCTCAAGGATGCAGGGGCTGGGCTTCTT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAAGGGCACACTTAGCTaGCCAACAGATGGAACCAGT +
Preference number: 4 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFKGTLS*PTDGTS
Trigger: ACTGGTTCCATCTGTTGGGCAGCTAAGTGTGCCCTT...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGTGGATTCAACTTGCTaGGCAGGTAATCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVVDSTC*AGNPQR
Trigger: CCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCAC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGTTGTGGATTCAACTTaGTGCGCAGGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDVVDST*CAGNPQ
Trigger: TTGTGGATTACCTGCGCAGCAAGTTGAATCCACAAC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAATCCTGTTGCTTCTTaGTCTTCTTGTCTGGACGAC +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDNPVAS*SSCLDD
Trigger: GTCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACTCTGTGGACGCCATTaGCTGCCCTACTCGAGAAAT +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGLCGRH*LPYSRN
Trigger: ATTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAG...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTAGCTGTTTTCTGGAATaGCTGGCCGGCTTTCCTAAA +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRSCFLE*LAGFPK
Trigger: TTTAGGAAAGCCGGCCAGGCATTCCAGAAAACAGCT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGATGAAAGGACAGGCTaGAAACCCACAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRDERTG*KPTKEI
Trigger: GATCTCCTTTGTGGGTTTCCAGCCTGTCCTTTCATC...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGTAATAGAGGCCAACTaGAAACATGAAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDVIEAN*KHEDEE
Trigger: CTCCTCGTCTTCATGTTTCCAGTTGGCCTCTATTAC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAGATTCTTCATGTATGTaGACAGCACCTGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTDSSCM*TAPGRL
Trigger: GAGTCTCCCAGGTGCTGTCCACATACATGAAGAATC...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGATTCTTCATGTATGTaGACAGCACCTGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVDSSCM*TAPGRL
Trigger: GAGTCTCCCAGGTGCTGTCCACATACATGAAGAATC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGGGCAGATAGTACAATaGACGGAGAAGAGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDGQIVQ*TEKSRP
Trigger: AGGCCTACTCTTCTCCGTCCATTGTACTATCTGCCC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAGACCTTCGCATCCTCTaGAGTATTATGACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTDLRIL*SIMTKP
Trigger: TGGCTTCGTCATAATACTCCAGAGGATGCGAAGGTC...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGCAGTTGAGCAGCACTaGAGAACCTTCACGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELAVEQH*RTFTVH
Trigger: GTGGACCGTGAAGGTTCTCCAGTGCTGCTCAACTGC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACACGGTCAAAGCCTaGAGGACGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELDTVKA*RTLGFC
Trigger: ACAGAAGCCAAGCGTCCTCCAGGCTTTGACCGTGTC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACCTGCTTATGTCCTTCTaGCAGCCTAGCATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDLLMSF*QPSIAF
Trigger: AAAAGCTATGCTAGGCTGCCAGAAGGACATAAGCAG...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACACTTGACATGAATGGGTaGCAACACACGACGATCAGT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTLDMNG*QHTTIS
Trigger: ACTGATCGTCGTGTGTTGCCACCCATTCATGTCAAG...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS-3UTR TCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGTTAGTCATCTTGACATaGATGGGTGGCAACACACGA +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVLVILT*MGGNTR
Trigger: TCGTGTGTTGCCACCCATTCATGTCAAGATGACTAA...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATTAGTCATCTTGACATaGATGGGTGGCAACACACGA +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTLVILT*MGGNTR
Trigger: TCGTGTGTTGCCACCCATTCATGTCAAGATGACTAA...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATCCACATGTAGTAGGTaGGTAGCATGCAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTSTCSR*VACKRW
Trigger: CCATCTTTTGCATGCTACTCACCTACTACATGTGGA...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTCACATAACCTCCCCATaGCGAGACCATGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRHITSP*RDHVEI
Trigger: TATTTCTACATGGTCTCGTCATGGGGAGGTTATGTG...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAAGCCTACCAGAGAGATaGCGCTCCGGAAAAGAACTT +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGSLPER*RSGKEL
Trigger: AAGTTCTTTTCCGGAGCGTCATCTCTCTGGTAGGCT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCGGAGAGCTCCCACGGTaGGAAGGACAAAGCCTACCA +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLGELPR*EGQSLP
Trigger: TGGTAGGCTTTGTCCTTCTCACCGTGGGAGCTCTCC...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGGAAGTCATCAAATATaGTCCTACTGCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDGSHQI*SYCHPH
Trigger: GTGGGGATGGCAGTAGGATCATATTTGATGACTTCC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTTTACCTTGTATATCCTaGCCAGCCAATGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRLPCIS*PANVLW
Trigger: CCACAGAACATTGGCTGGTCAGGATATACAAGGTAA...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAAGAAGCCCAGCCCCTaGATCCTTGAGCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLKKPSP*ILELFG
Trigger: ACCAAAGAGCTCAAGGATGCAGGGGCTGGGCTTCTT...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGTTGTGGATTCAACTTaGTGCGCAGGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRVVDST*CAGNPQ
Trigger: TTGTGGATTACCTGCGCAGCAAGTTGAATCCACAAC...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGTTGTGGATTCAACTTaGTGCGCAGGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVVVDST*CAGNPQ
Trigger: TTGTGGATTACCTGCGCAGCAAGTTGAATCCACAAC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGAATCCTGTTGCTTCTTaGTCTTCTTGTCTGGACGAC +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVNPVAS*SSCLDD
Trigger: GTCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATT...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTGGCCCAGCCCATACTaGCCAAGACAAAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELWPSPY*PRQNFQ
Trigger: CTGGAAGTTTTGTCTTGGGCAGTATGGGCTGGGCCA...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTCAGCAAACAGACGAGTaGAGAAGGATAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRQQTDE*RRIIQQ
Trigger: CTGCTGTATTATCCTTCTCCACTCGTCTGTTTGCTG...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTATCAGCACGAGGACGTaGAGAGGAATTAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRISTRT*RGIKLI
Trigger: GATCAACTTAATTCCTCTCCACGTCCTCGTGCTGAT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAATCAGCACGAGGACGTaGAGAGGAATTAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTISTRT*RGIKLI
Trigger: GATCAACTTAATTCCTCTCCACGTCCTCGTGCTGAT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACAAAGGCATGGATCTaGCAGAGACCAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: SALAIQIYNSISLRSTTMTKAWI*QRPKTP
Trigger: TGGGGTCTTTGGTCTCTGCCAGATCCATGCCTTTGT...CATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAACAAAGGCATGGATCTaGCAGAGACCAAAGACCCCA +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGTKAWI*QRPKTP
Trigger: TGGGGTCTTTGGTCTCTGCCAGATCCATGCCTTTGT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGTAATAGAGGCCAACTaGAAACATGAAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVVIEAN*KHEDEE
Trigger: CTCCTCGTCTTCATGTTTCCAGTTGGCCTCTATTAC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTATGTGGACAGCACCTaGGAGACTCCAATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELYVDST*ETPMPE
Trigger: CTCTGGCATTGGAGTCTCCCAGGTGCTGTCCACATA...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGACACGGTCAAAGCCTaGAGGACGCTTGGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRADTVKA*RTLGFC
Trigger: ACAGAAGCCAAGCGTCCTCCAGGCTTTGACCGTGTC...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAAAATCATTTCATTTaGCCCAGCCCATACTGCCCA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDKNHFI*PSPYCP
Trigger: TGGGCAGTATGGGCTGGGCCAAATGAAATGATTTTT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATAATCCCACCAGGACATaGCCTTCGCATCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNNPTRT*PSHPLE
Trigger: CTCCAGAGGATGCGAAGGTCATGTCCTGGTGGGATT...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCTTACCTTGTATATCCTaGCCAGCCAATGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFLPCIS*PANVLW
Trigger: CCACAGAACATTGGCTGGTCAGGATATACAAGGTAA...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACACAACCACAAGAGTTTTaGGTAAAGGGTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTQPQEF*VKGHSC
Trigger: ACAGGAATGACCCTTTACTCAAAACTCTTGTGGTTG...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCAGCCTCCCCAGTAGCTaGGATTACAGGGTGTGTACC +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLSLPSS*DYRVCT
Trigger: GGTACACACCCTGTAATCTCAGCTACTGGGGAGGCT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR GCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGTGGATTCAACTTGCTaGGCAGGTAATCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGVDSTC*AGNPQR
Trigger: CCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCAC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTTGTGGATTCAACTTaGTGCGCAGGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDVVDST*CAGNPQ
Trigger: TTGTGGATTACCTGCGCAGCAAGTTGAATCCACAAC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGTCCTAAATGTGATGTaGTCAGTGCGAAGCATATCA +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRVLNVM*SVRSIS
Trigger: TGATATGCTTCGCACTGAGCACATCACATTTAGGAC...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTACAGGCATGATCCACTaGGCCCTGCCTAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFTGMIH*ALPRVP
Trigger: TGGGACCCTAGGCAGGGCGCAGTGGATCATGCCTGT...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR GCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATATGATGTCTGCTCACTaGAACCTCCACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNMMSAH*NLHLLG
Trigger: GCCCAGGAGGTGGAGGTTGCAGTGAGCAGACATCAT...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR CCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCATCAGCACGAGGACGTaGAGAGGAATTAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFISTRT*RGIKLI
Trigger: GATCAACTTAATTCCTCTCCACGTCCTCGTGCTGAT...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTATGAGGACCAGGTTGTaGGCTGATGCTCAGACACAG +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAMRTRL*ADAQTQ
Trigger: CTGTGTCTGAGCATCAGCCCACAACCTGGTCCTCAT...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGATTCTTCATGTATGTaGACAGCACCTGGGAGACTC +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGDSSCM*TAPGRL
Trigger: GAGTCTCCCAGGTGCTGTCCACATACATGAAGAATC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGCTTGCTCTTCTTGTCTaGACGACTTATGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVLALLV*TTYVQI
Trigger: AATCTGGACATAAGTCGTCCAGACAAGAAGAGCAAG...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACACTTGCTCTTCTTGTCTaGACGACTTATGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTLALLV*TTYVQI
Trigger: AATCTGGACATAAGTCGTCCAGACAAGAAGAGCAAG...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTAGGCTTTTTCCTCTGTaGACGCCATTGCCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRARLFPL*TPLPAL
Trigger: TAGGGCAGGCAATGGCGTCCACAGAGGAAAAAGCCT...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTACGGAACTCCCCAGTTaGAGTATAATAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRTELPS*SIIVIL
Trigger: GAGAATGACTATTATACTCCAACTGGGGAGTTCCGT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAACGGAACTCCCCAGTTaGAGTATAATAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTTELPS*SIIVIL
Trigger: GAGAATGACTATTATACTCCAACTGGGGAGTTCCGT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAGGGAGCTAAGAGAATaGACAAGGTCTGCTTATGTC +
Preference number: 4 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFRELRE*TRSAYV
Trigger: GACATAAGCAGACCTTGTCCATTCTCTTAGCTCCCT...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAGGGAGCTAAGAGAATaGACAAGGTCTGCTTATGTC +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDRELRE*TRSAYV
Trigger: GACATAAGCAGACCTTGTCCATTCTCTTAGCTCCCT...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGTTTTCTGGAATGCCTaGCCGGCTTTCCTAAACGAT +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGVFWNA*PAFLND
Trigger: ATCGTTTAGGAAAGCCGGCCAGGCATTCCAGAAAAC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS-3UTR TCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTCAGGTCAAAATAGTATaGGGACCAGGTTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAQVKIV*GPGCGL
Trigger: CAGCCCACAACCTGGTCCTCATACTATTTTGACCTG...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAGGCCAACTGGAAACATaGAGACGAGGAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQGQLET*RRGAAG
Trigger: ACCTGCAGCTCCTCGTCTTCATGTTTCCAGTTGGCC...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACTCCAAAGAAACTTGTTaGTATCATCAGAGGAATACC +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDSKETC*YHQRNT
Trigger: GGTATTCCTCTGATGATATCAACAAGTTTCTTTGGA...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGCAGTATCATCCCACTTaGCACTTCATTCTTAATAGG +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVQYHPT*HFILNR
Trigger: CCTATTAAGAATGAAGTGGCAAGTGGGATGATACTG...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTGTTTGCCTGTATCTGTaGTCCCTCCAATCCGGACCA +
Preference number: 4 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKAVCLYL*SLQSGP
Trigger: TGGTCCGGATTGGAGGGAGCACAGATACAGGCAAAC...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAATTGTACTAGGTGCTaGAATGCAAAGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTNCTRC*NAKGYD
Trigger: GTCATAACCCTTTGCATTGCAGCACCTAGTACAATT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTAGGAATTGTACTAGGTaGTGCAATGCAAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRRNCTR*CNAKGY
Trigger: ATAACCCTTTGCATTGCAGCACCTAGTACAATTCCT...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCCTCAAGGACCACTGTaGTTCCCAGTTAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDPQGPL*FPVKLF
Trigger: AAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGG...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCACACGACGATCAGCTaGCCGGCTTTCCTAAACGAT +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLHTTIS*PAFLND
Trigger: ATCGTTTAGGAAAGCCGGCCAGCTGATCGTCGTGTG...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392708.9
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAATCAGCACGAGGACGTaGAGAGGAATTAAGTTGATC +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGISTRT*RGIKLI
Trigger: GATCAACTTAATTCCTCTCCACGTCCTCGTGCTGAT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGATGAAAGGACAGGCTaGAAACCCACAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELDERTG*KPTKEI
Trigger: GATCTCCTTTGTGGGTTTCCAGCCTGTCCTTTCATC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTGATGAAAGGACAGGCTaGAAACCCACAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLDERTG*KPTKEI
Trigger: GATCTCCTTTGTGGGTTTCCAGCCTGTCCTTTCATC...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAACTTCAAATTGTTGTaGATTCAACTTGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTNFKLL*IQLAAQ
Trigger: CTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGAAGAGTAGGCCTCACTaGTCACCCAGGTTGAATGAA +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELKSRPH*SPRLNE
Trigger: TTCATTCAACCTGGGTGACCAGTGAGGCCTACTCTT...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGGCAGATAGTACAATaGACGGAGAAGAGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAGQIVQ*TEKSRP
Trigger: AGGCCTACTCTTCTCCGTCCATTGTACTATCTGCCC...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTGACCTTCGCATCCTCTaGAGTATTATGACGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLDLRIL*SIMTKP
Trigger: TGGCTTCGTCATAATACTCCAGAGGATGCGAAGGTC...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCAGGCTTTTTCCTCTGTaGACGCCATTGCCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLRLFPL*TPLPAL
Trigger: TAGGGCAGGCAATGGCGTCCACAGAGGAAAAAGCCT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCAGCCTGGAGGACGCTTaGCTTCTGTGTAAACCTGTC +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLSLEDA*LLCKPV
Trigger: GACAGGTTTACACAGAAGCCAAGCGTCCTCCAGGCT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTTTCTTGCAGGCAGGCTaGCACTGCTCTCTAGGGACC +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFFLQAG*HCSLGT
Trigger: GGTCCCTAGAGAGCAGTGCCAGCCTGCCTGCAAGAA...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTATATAAATTGGTTTaGAAGGCTAAGTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDVYKLV*KAKCPG
Trigger: GCCAGGGCACTTAGCCTTCCAAACCAATTTATATAC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATCTGGTCTTGAACTCCTaGGCTCAAGTGATCCGCATG +
Preference number: 4 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNLVLNS*AQVIRM
Trigger: CATGCGGATCACTTGAGCCCAGGAGTTCAAGACCAG...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGAAATTGTTCCTCCAATaGTTCGTCCCAAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELKLFLQ*FVPKGT
Trigger: GGTACCCTTTGGGACGAATCATTGGAGGAACAATTT...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGACCAGGTTGTGGGCTaGTGCTCAGACACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFDQVVG*CSDTEA
Trigger: TGCTTCTGTGTCTGAGCATCAGCCCACAACCTGGTC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAACAGGTCAAAATAGTATaGGGACCAGGTTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKQVKIV*GPGCGL
Trigger: CAGCCCACAACCTGGTCCTCATACTATTTTGACCTG...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGGCCAACTGGAAACATaGAGACGAGGAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFGQLET*RRGAAG
Trigger: ACCTGCAGCTCCTCGTCTTCATGTTTCCAGTTGGCC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTCATCGAGCTCCCTCATaGTCTCATAGGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAHRAPS*SHRLFP
Trigger: AGGAAAAAGCCTATGAGATCATGAGGGAGCTCGATG...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATCCAAAGAAACTTGTTaGTATCATCAGAGGAATACC +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTSKETC*YHQRNT
Trigger: GGTATTCCTCTGATGATATCAACAAGTTTCTTTGGA...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAATAGTCATTCTCCTTaGTATGTTTGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTNSHSP*YVCLYL
Trigger: CAGATACAGGCAAACATATCAAGGAGAATGACTATT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGCAACCACAAGAGTTTTaGGTAAAGGGTCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SALAIQIYNSISLRSTTMQPQEF*VKGHSC
Trigger: ACAGGAATGACCCTTTACTCAAAACTCTTGTGGTTG...CATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTGGATTCAACTTGCTaGGCAGGTAATCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAVDSTC*AGNPQR
Trigger: CCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCAC...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCAGTATCATCCCACTTaGCACTTCATTCTTAATAGG +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDQYHPT*HFILNR
Trigger: CCTATTAAGAATGAAGTGGCAAGTGGGATGATACTG...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAACGAAGCCAATAATATaGTTCTCGGAAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: NVLNVMCSVRSISELDVTTKPII*FSEVIK
Trigger: TTTGATGACTTCCGAGAAGCATATTATTGGCTTCGT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAGTTTGCCTGTATCTGTaGTCCCTCCAATCCGGACCA +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQVCLYL*SLQSGP
Trigger: TGGTCCGGATTGGAGGGAGCACAGATACAGGCAAAC...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGTCCTAAATGTGATGTaGTCAGTGCGAAGCATATCA +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGVLNVM*SVRSIS
Trigger: TGATATGCTTCGCACTGAGCACATCACATTTAGGAC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTTGGCCCAGCCCATACTaGCCAAGACAAAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSWPSPY*PRQNFQ
Trigger: CTGGAAGTTTTGTCTTGGGCAGTATGGGCTGGGCCA...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTAGAATGGACAAGGTCTaGTTATGTCCTTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRARMDKV*LCPSGS
Trigger: GCTGCCAGAAGGACATAAGCAGACCTTGTCCATTCT...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACAGGAATTGTACTAGGTaGTGCAATGCAAAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: IFNVLNVMCSVRSISELDRNCTR*CNAKGY
Trigger: ATAACCCTTTGCATTGCAGCACCTAGTACAATTCCT...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAACTTGACATGAATGGGTaGCAACACACGACGATCAGC +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKLDMNG*QHTTIS
Trigger: GCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAG...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGTAATAGAGGCCAACTaGAAACATGAAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELVIEAN*KHEDEE
Trigger: CTCCTCGTCTTCATGTTTCCAGTTGGCCTCTATTAC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTTATGTGGACAGCACCTaGGAGACTCCAATGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSYVDST*ETPMPE
Trigger: CTCTGGCATTGGAGTCTCCCAGGTGCTGTCCACATA...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACTTGCTCTTCTTGTCTaGACGACTTATGTCCAGATT +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGLALLV*TTYVQI
Trigger: AATCTGGACATAAGTCGTCCAGACAAGAAGAGCAAG...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACCCTACTCGAGAAATATaGGTATTATTCCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDPTREI*VLFHVL
Trigger: TAACACATGGAATAATACCCATATTTCTCGAGTAGG...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGCAGTTGAGCAGCACTaGAGAACCTTCACGGTCCAC +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFAVEQH*RTFTVH
Trigger: GTGGACCGTGAAGGTTCTCCAGTGCTGCTCAACTGC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAAGCCTGGAGGACGCTTaGCTTCTGTGTAAACCTGTC +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQSLEDA*LLCKPV
Trigger: GACAGGTTTACACAGAAGCCAAGCGTCCTCCAGGCT...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATGGTATATAAATTaGTTTGGAAGGCTAAGTGCC +
Preference number: 4 (lower is better)
Translates to: FNVLNVMCSVRSISELDVTWYIN*FGRLSA
Trigger: GGCACTTAGCCTTCCAAACCAATTTATATACCATGT...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTCACATAACCTCCCCATaGCGAGACCATGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAHITSP*RDHVEI
Trigger: TATTTCTACATGGTCTCGTCATGGGGAGGTTATGTG...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTCAGGTCAAAATAGTATaGGGACCAGGTTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSQVKIV*GPGCGL
Trigger: CAGCCCACAACCTGGTCCTCATACTATTTTGACCTG...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTCATCGAGCTCCCTCATaGTCTCATAGGCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKAHRAPS*SHRLFP
Trigger: AGGAAAAAGCCTATGAGATCATGAGGGAGCTCGATG...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCTTCAAAAACACCTACTaGCCATCAAGCTCTATATGT +
Preference number: 4 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFFKNTY*PSSSIC
Trigger: ACATATAGAGCTTGATGGTCAGTAGGTGTTTTTGAA...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGATATCTCTCAGGGTTTaGAGCTGTTTTCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELISLRV*SCFLEC
Trigger: GCATTCCAGAAAACAGCTGCAAACCCTGAGAGATAT...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS-3UTR CCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTCAGCAAACAGACGAGTaGAGAAGGATAATACAGCAG +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAQQTDE*RRIIQQ
Trigger: CTGCTGTATTATCCTTCTCCACTCGTCTGTTTGCTG...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000649491.1
CDS-3UTR CCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATGATGAAAGGACAGGCTaGAAACCCACAAAGGAGATC +
Preference number: 4 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNDERTG*KPTKEI
Trigger: GATCTCCTTTGTGGGTTTCCAGCCTGTCCTTTCATC...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAAAAGAGTAGGCCTCACTaGTCACCCAGGTTGAATGAA +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKKSRPH*SPRLNE
Trigger: TTCATTCAACCTGGGTGACCAGTGAGGCCTACTCTT...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAGGGCAGATAGTACAATaGACGGAGAAGAGTAGGCCT +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQGQIVQ*TEKSRP
Trigger: AGGCCTACTCTTCTCCGTCCATTGTACTATCTGCCC...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTCCTACTCGAGAAATATaGGTATTATTCCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRPTREI*VLFHVL
Trigger: TAACACATGGAATAATACCCATATTTCTCGAGTAGG...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGTATATAAATTGGTTTaGAAGGCTAAGTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELVYKLV*KAKCPG
Trigger: GCCAGGGCACTTAGCCTTCCAAACCAATTTATATAC...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR CAA 72 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATaGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAG +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVK*FLFRQDFTVAQ
Trigger: CTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAATTAGTCATCTTGACATaGATGGGTGGCAACACACGA +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKLVILT*MGGNTR
Trigger: TCGTGTGTTGCCACCCATTCATGTCAAGATGACTAA...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCTCCACATGTAGTAGGTaGGTAGCATGCAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLSTCSR*VACKRW
Trigger: CCATCTTTTGCATGCTACTCACCTACTACATGTGGA...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCACATAACCTCCCCATaGCGAGACCATGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLHITSP*RDHVEI
Trigger: TATTTCTACATGGTCTCGTCATGGGGAGGTTATGTG...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAACACATAACCTCCCCATaGCGAGACCATGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKHITSP*RDHVEI
Trigger: TATTTCTACATGGTCTCGTCATGGGGAGGTTATGTG...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAAATAGTCATTCTCCTTaGTATGTTTGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGNSHSP*YVCLYL
Trigger: CAGATACAGGCAAACATATCAAGGAGAATGACTATT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGAAAGAAGCTCACCTTTaGACAACCACAAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELKEAHL*TTTRVL
Trigger: CAAAACTCTTGTGGTTGTTCAAAGGTGAGCTTCTTT...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAACGAAGCCAATAATATaGTTCTCGGAAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGTKPII*FSEVIK
Trigger: TTTGATGACTTCCGAGAAGCATATTATTGGCTTCGT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR GCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTCCTCAAGGACCACTGTaGTTCCCAGTTAAATTGTTT +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAPQGPL*FPVKLF
Trigger: AAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGG...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTAGCTCTTTGGTAAGGTaGTACGTGACGATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFSSLVR*YVTMVV
Trigger: CACCACCATCGTCACGTACCACCTTACCAAAGAGCT...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAAGTAATAGAGGCCAACTaGAAACATGAAGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKVIEAN*KHEDEE
Trigger: CTCCTCGTCTTCATGTTTCCAGTTGGCCTCTATTAC...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTACGGAACTCCCCAGTTaGAGTATAATAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRATELPS*SIIVIL
Trigger: GAGAATGACTATTATACTCCAACTGGGGAGTTCCGT...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCACTCTTCTAGCTATCTaGCCGGCTTTCCTAAACGAT +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLTLLAI*PAFLND
Trigger: ATCGTTTAGGAAAGCCGGCCAGATAGCTAGAAGAGT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649491.1
CDS-3UTR TCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGGAAGTCATCAAATATaGTCCTACTGCCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFGSHQI*SYCHPH
Trigger: GTGGGGATGGCAGTAGGATCATATTTGATGACTTCC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTAATAGTCATTCTCCTTaGTATGTTTGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLNSHSP*YVCLYL
Trigger: CAGATACAGGCAAACATATCAAGGAGAATGACTATT...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAATTACCTTGTATATCCTaGCCAGCCAATGTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQLPCIS*PANVLW
Trigger: CCACAGAACATTGGCTGGTCAGGATATACAAGGTAA...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTTTCACTGTTTGTCTTaGGTCTTCAAAACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: KIFNVLNVMCSVRSISELFHCLS*VFKTAD
Trigger: ATCAGCAGTTTTGAAGACTCAAGACAAACAGTGAAA...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGTGGATTCAACTTGCTaGGCAGGTAATCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFVDSTC*AGNPQR
Trigger: CCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCAC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCTACTCGAGAAATATaGGTATTATTCCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGPTREI*VLFHVL
Trigger: TAACACATGGAATAATACCCATATTTCTCGAGTAGG...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTCTGCTTATGTCCTTCTaGCAGCCTAGCATAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSLLMSF*QPSIAF
Trigger: AAAAGCTATGCTAGGCTGCCAGAAGGACATAAGCAG...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp TCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCTGTTCCTTCTAGCACTCTTCTaGTCCCACATTTATTCATTC +
Preference number: 4 (lower is better)
Translates to: SLRSTTMTNLKVMQFLLFLLALF*SHIYSF
Trigger: GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAG...GAACAGGAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTAAATTGTTCCTCCAATaGTTCGTCCCAAAGGGTACC +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFKLFLQ*FVPKGT
Trigger: GGTACCCTTTGGGACGAATCATTGGAGGAACAATTT...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTTCCACATGTAGTAGGTaGGTAGCATGCAAAAGATGG +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFSTCSR*VACKRW
Trigger: CCATCTTTTGCATGCTACTCACCTACTACATGTGGA...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTTCCAAAGAAACTTGTTaGTATCATCAGAGGAATACC +
Preference number: 4 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRASKETC*YHQRNT
Trigger: GGTATTCCTCTGATGATATCAACAAGTTTCTTTGGA...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR TCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCGTCATTCCTGTGTCATaGATAAGTGAGAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLVIPVS*ISESTE
Trigger: TTCAGTACTCTCACTTATTCATGACACAGGAATGAC...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAGGAACCAGTCTTTACTaGCTTGATCCACATGTAGTA +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQGTSLY*LDPHVV
Trigger: TACTACATGTGGATCAAGGCAGTAAAGACTGGTTCC...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTCAGTATCATCCCACTTaGCACTTCATTCTTAATAGG +
Preference number: 4 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKAQYHPT*HFILNR
Trigger: CCTATTAAGAATGAAGTGGCAAGTGGGATGATACTG...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCAACTTCAAATTGTTGTaGATTCAACTTGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLNFKLL*IQLAAQ
Trigger: CTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTT...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTCCTACTCGAGAAATATaGGTATTATTCCATGTGTTA +
Preference number: 4 (lower is better)
Translates to: WFGRLSALAIQIYNSISLPTREI*VLFHVL
Trigger: TAACACATGGAATAATACCCATATTTCTCGAGTAGG...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR CAA 72 bp AAATCTCACCCACAGTTGAAGAACATGGTATATAAATaGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAAT +
Preference number: 4 (lower is better)
Translates to: KSHPQLKNMVYK*VWKAKCPGYTN
Trigger: ATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp GCTAAATCTCACCCACAGTTGAAGAACATGGTATATAAATTGGTTTGGAAGGCTTCCAAAGAAACTTGTTaGTATCATCAGAGGAATACC +
Preference number: 4 (lower is better)
Translates to: AKSHPQLKNMVYKLVWKASKETC*YHQRNT
Trigger: GGTATTCCTCTGATGATATCAACAAGTTTCTTTGGA...AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAAAATAGTCATTCTCCTTaGTATGTTTGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKNSHSP*YVCLYL
Trigger: CAGATACAGGCAAACATATCAAGGAGAATGACTATT...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATTTCAAAAACACCTACTaGCCATCAAGCTCTATATGT +
Preference number: 4 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNFKNTY*PSSSIC
Trigger: ACATATAGAGCTTGATGGTCAGTAGGTGTTTTTGAA...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAAAAGAAGCTCACCTTTaGACAACCACAAGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQKEAHL*TTTRVL
Trigger: CAAAACTCTTGTGGTTGTTCAAAGGTGAGCTTCTTT...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAAACGAAGCCAATAATATaGTTCTCGGAAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKTKPII*FSEVIK
Trigger: TTTGATGACTTCCGAGAAGCATATTATTGGCTTCGT...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGTCCTAAATGTGATGTaGTCAGTGCGAAGCATATCA +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFVLNVM*SVRSIS
Trigger: TGATATGCTTCGCACTGAGCACATCACATTTAGGAC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTAATTGTACTAGGTGCTaGAATGCAAAGGGTTATGAC +
Preference number: 4 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSNCTRC*NAKGYD
Trigger: GTCATAACCCTTTGCATTGCAGCACCTAGTACAATT...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTCTTCTAGCACTCTTCTaGTCCCACATTTATTCATTC +
Preference number: 4 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSLLALF*SHIYSF
Trigger: GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAG...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CCA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATACATGGTATATAAATTaGTTTGGAAGGCTAAGTGCC +
Preference number: 4 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNTWYIN*FGRLSA
Trigger: GGCACTTAGCCTTCCAAACCAATTTATATACCATGT...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR TCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTGTCATTCCTGTGTCATaGATAAGTGAGAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFVIPVS*ISESTE
Trigger: TTCAGTACTCTCACTTATTCATGACACAGGAATGAC...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTCAGTATCATCCCACTTaGCACTTCATTCTTAATAGG +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFQYHPT*HFILNR
Trigger: CCTATTAAGAATGAAGTGGCAAGTGGGATGATACTG...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR GCA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTACGAAGCCAATAATATaGTTCTCGGAAGTCATCAAA +
Preference number: 4 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFTKPII*FSEVIK
Trigger: TTTGATGACTTCCGAGAAGCATATTATTGGCTTCGT...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
3UTR CAA 72 bp AGTAAATCAAATCTTGAGGCTAAATCTCACCCACAGTaGAAGAACATGGTATATAAATTGGTTTGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: SKSNLEAKSHPQ*KNMVYKLVWKA
Trigger: AGCCTTCCAAACCAATTTATATACCATGTTCTTCAACTGTGGGTGAGATTTAGCCTCAAGATTTGATTTACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS TCA 90 bp GTTCCAGCGGGTCCCACCTCCCTCTTCTTCCCACCCTCAAAGAACTaGCCACCTCTGATACCCCTCAGCGCGGGACACTCATCACCCCAG +
Preference number: 5 (lower is better)
Translates to: VPAGPTSLFFPPSKN*PPLIPLSAGHSSPQ
Trigger: CTGGGGTGATGAGTGTCCCGCGCTGAGGGGTATCAGAGGTGGTCAGTTCTTTGAGGGTGGGAAGAAGAGGGAGGTGGGACCCGCTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS TCA 90 bp GTCCCACCTCCCTCTTCTTCCCACCCTCAAAGAACTGACCACCTCTaGTACCCCTCAGCGCGGGACACTCATCACCCCAGCATCCTACGC +
Preference number: 5 (lower is better)
Translates to: VPPPSSSHPQRTDHL*YPSARDTHHPSILR
Trigger: GCGTAGGATGCTGGGGTGATGAGTGTCCCGCGCTGAGGGGTATCAGAGGTGGTCAGTTCTTTGAGGGTGGGAAGAAGAGGGAGGTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS TCA 90 bp CGATCAGCTTTATCCTCAGGCACTTCCACTCCCTGCGCGCCTCGGTaGGCCAAGGCTACACCAGAGAGAGTGGGAACGTCTCGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: RSALSSGTSTPCAPR*AKATPERVGTSRSS
Trigger: AGAGCTGCGAGACGTTCCCACTCTCTCTGGTGTAGCCTTGGCTCACCGAGGCGCGCAGGGAGTGGAAGTGCCTGAGGATAAAGCTGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS GCA 90 bp GCAACCTGCTCTCCTCAACTGTGCCCTGCAAGCTGTGGCATCTCCTaGCACCCTGCCTCTAGTTTCCCAGACTGCAATTTCCCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: ATCSPQLCPASCGIS*HPASSFPDCNFPSP
Trigger: GGGGCTGGGGAAATTGCAGTCTGGGAAACTAGAGGCAGGGTGGCAGGAGATGCCACAGCTTGCAGGGCACAGTTGAGGAGAGCAGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS CCA 90 bp CCACTCCCTGCGCGCCTCGGTGAGCCAAGGCTACACCAGAGAGAGTaGGAACGTCTCGCAGCTCTTCGAACTTGTTGCCTCTACCACTCA +
Preference number: 5 (lower is better)
Translates to: PLPARLGEPRLHQRE*ERLAALRTCCLYHS
Trigger: TGAGTGGTAGAGGCAACAAGTTCGAAGAGCTGCGAGACGTTCCCACTCTCTCTGGTGTAGCCTTGGCTCACCGAGGCGCGCAGGGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS CCA 90 bp AGCCAGCCACAGATCGGGAGATATATCCAGGAACTACAGCAATCATaGCAGCAGCAAGAAGCCCAGCCCCTGCATCCTCTCAGGTATCTC +
Preference number: 5 (lower is better)
Translates to: SQPQIGRYIQELQQS*QQQEAQPLHPLRYL
Trigger: GAGATACCTGAGAGGATGCAGGGGCTGGGCTTCTTGCTGCTGCCATGATTGCTGTAGTTCCTGGATATATCTCCCGATCTGTGGCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527456.1
CDS GCA 90 bp CTACACCAGAGAGAGTGGGAACGTCTCGCAGCTCTTCGAACTTGTTaGCTCTACCACTCACGCAGTTTCCTATTCTCCCATGAACGGAAC +
Preference number: 5 (lower is better)
Translates to: LHQREWERLAALRTC*LYHSRSFLFSHERN
Trigger: GTTCCGTTCATGGGAGAATAGGAAACTGCGTGAGTGGTAGAGGCAACAAGTTCGAAGAGCTGCGAGACGTTCCCACTCTCTCTGGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS-3UTR CAA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGCCAGCCCCTGCATCCTaGAGCTCTTTGGTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: FNVLNVMCSVRSISELDVPAPAS*SSLVRW
Trigger: CCACCTTACCAAAGAGCTCAAGGATGCAGGGGCTGG...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTCCAGCCCCTGCATCCTaGAGCTCTTTGGTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRPAPAS*SSLVRW
Trigger: CCACCTTACCAAAGAGCTCAAGGATGCAGGGGCTGG...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp GTAGCCCAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCCCTCTGTGGACGCCATaGCCTGCCCTACTCGAGAAA +
Preference number: 5 (lower is better)
Translates to: VAQKGTLLALFWSHIYSFPLWTP*PALLEK
Trigger: TTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAGG...GAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTGGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS TCA 90 bp GGTCCACACGGAACTCCCCAGTTGGAGTATAATAGTCATTCTCCTTaGTATGTTTGCCTGTATCTGTGCTCCCTCCAATCCGGACCATCC +
Preference number: 5 (lower is better)
Translates to: GPHGTPQLEYNSHSP*YVCLYLCSLQSGPS
Trigger: GGATGGTCCGGATTGGAGGGAGCACAGATACAGGCAAACATATCAAGGAGAATGACTATTATACTCCAACTGGGGAGTTCCGTGTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392708.9
ENST00000525946.5
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACAAGTATGAGGACCAGGTaGTGGGCTGATGCTCAGACA +
Preference number: 5 (lower is better)
Translates to: NVLNVMCSVRSISELDVTSMRTR*WADAQT
Trigger: TGTCTGAGCATCAGCCCACAACCTGGTCCTCATACT...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCTCTGTGGACGCCATaGCCTGCCCTACTCGAGAAA +
Preference number: 5 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGPLWTP*PALLEK
Trigger: TTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAGG...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS CCA 90 bp TCTGGACGACTTATGTCCAGATTCTTCATGTATGTGGACAGCACCTaGGAGACTCCAATGCCAGAGAGAATGCACATAACAGGTGCCAAC +
Preference number: 5 (lower is better)
Translates to: SGRLMSRFFMYVDST*ETPMPERMHITGAN
Trigger: GTTGGCACCTGTTATGTGCATTCTCTCTGGCATTGGAGTCTCCCAGGTGCTGTCCACATACATGAAGAATCTGGACATAAGTCGTCCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000524639.5
ENST00000526726.1
ENST00000529196.5
ENST00000531491.5
ENST00000531599.1
ENST00000649491.1
CDS CCA 90 bp AAAGCGATAGTAACACATCTTGTACATGAGGCAGTTGAGCAGCACTaGAGAACCTTCACGGTCCACACGGAACTCCCCAGTTGGAGTATA +
Preference number: 5 (lower is better)
Translates to: KAIVTHLVHEAVEQH*RTFTVHTELPSWSI
Trigger: TATACTCCAACTGGGGAGTTCCGTGTGGACCGTGAAGGTTCTCCAGTGCTGCTCAACTGCCTCATGTACAAGATGTGTTACTATCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392708.9
ENST00000525946.5
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGCCAGCCCCTGCATCCTaGAGCTCTTTGGTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: KIFNVLNVMCSVRSISELPAPAS*SSLVRW
Trigger: CCACCTTACCAAAGAGCTCAAGGATGCAGGGGCTGG...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACGAATCCTGTTGCTTCTaGCTCTTCTTGTCTGGACGA +
Preference number: 5 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDESCCF*LFLSGR
Trigger: TCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATTC...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGCCTCTGTGGACGCCATaGCCTGCCCTACTCGAGAAA +
Preference number: 5 (lower is better)
Translates to: KIFNVLNVMCSVRSISELPLWTP*PALLEK
Trigger: TTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAGG...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGTTGTACATGAGGCAGTaGAGCAGCACTGGAGAACCT +
Preference number: 5 (lower is better)
Translates to: FNVLNVMCSVRSISELDVLYMRQ*SSTGEP
Trigger: AGGTTCTCCAGTGCTGCTCAACTGCCTCATGTACAA...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS TCA 90 bp ATGAACAAGGCCATTTCAGAACACGAGGCCACATACCTGGAAACATaGAGACGAGGAGCTGCAGGTCAAAATAGTATGAGGACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: MNKAISEHEATYLET*RRGAAGQNSMRTRL
Trigger: CAACCTGGTCCTCATACTATTTTGACCTGCAGCTCCTCGTCTTCATGTTTCCAGGTATGTGGCCTCGTGTTCTGAAATGGCCTTGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534472.5
CDS CCA 90 bp GCCTACCAGAGAGATGACGCTCCGGAAAAGAACTTCAAATTGTTGTaGATTCAACTTGCTGCGCAGGTAATCCACAAAGGCATGGATCTG +
Preference number: 5 (lower is better)
Translates to: AYQRDDAPEKNFKLL*IQLAAQVIHKGMDL
Trigger: CAGATCCATGCCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCTCTGGTAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000525431.1
ENST00000529196.5
ENST00000531001.1
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS CCA 90 bp GAGCAGCACTGGAGAACCTTCACGGTCCACACGGAACTCCCCAGTTaGAGTATAATAGTCATTCTCCTTGATATGTTTGCCTGTATCTGT +
Preference number: 5 (lower is better)
Translates to: EQHWRTFTVHTELPS*SIIVILLDMFACIC
Trigger: ACAGATACAGGCAAACATATCAAGGAGAATGACTATTATACTCCAACTGGGGAGTTCCGTGTGGACCGTGAAGGTTCTCCAGTGCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392708.9
ENST00000525946.5
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATGCTTCTTGCTCTTCTaGTCTGGACGACTTATGTCC +
Preference number: 5 (lower is better)
Translates to: NVLNVMCSVRSISELDVTCFLLF*SGRLMS
Trigger: GGACATAAGTCGTCCAGACAAGAAGAGCAAGAAGCA...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGAATCCTGTTGCTTCTaGCTCTTCTTGTCTGGACGA +
Preference number: 5 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRESCCF*LFLSGR
Trigger: TCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATTC...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGAATCCTGTTGCTTCTaGCTCTTCTTGTCTGGACGA +
Preference number: 5 (lower is better)
Translates to: FNVLNVMCSVRSISELDVESCCF*LFLSGR
Trigger: TCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATTC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp TTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGGTAGGTGGAATCCTGTaGCTTCTTGCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: FNVLNVMCSVRSISELDVVGGIL*LLALLV
Trigger: GACAAGAAGAGCAAGAAGCAACAGGATTCCACCTAC...CACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp TCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCTGTTCCCTCTGTGGACGCCATaGCCTGCCCTACTCGAGAAA +
Preference number: 5 (lower is better)
Translates to: SLRSTTMTNLKVMQFLLFPLWTP*PALLEK
Trigger: TTTCTCGAGTAGGGCAGGCAATGGCGTCCACAGAGG...GAACAGGAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACTTGTACATGAGGCAGTaGAGCAGCACTGGAGAACCT +
Preference number: 5 (lower is better)
Translates to: IFNVLNVMCSVRSISELDLYMRQ*SSTGEP
Trigger: AGGTTCTCCAGTGCTGCTCAACTGCCTCATGTACAA...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTTCCAGGTCCTTTACCTaGTATATCCTGACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRSRSFT*YILTSQ
Trigger: TTGGCTGGTCAGGATATACAAGGTAAAGGACCTGGA...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAACCAGCCCCTGCATCCTaGAGCTCTTTGGTAAGGTGG +
Preference number: 5 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKPAPAS*SSLVRW
Trigger: CCACCTTACCAAAGAGCTCAAGGATGCAGGGGCTGG...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACTGCTTCTTGCTCTTCTaGTCTGGACGACTTATGTCC +
Preference number: 5 (lower is better)
Translates to: IFNVLNVMCSVRSISELDCFLLF*SGRLMS
Trigger: GGACATAAGTCGTCCAGACAAGAAGAGCAAGAAGCA...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTAGGTGGAATCCTGTaGCTTCTTGCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: IFNVLNVMCSVRSISELDVGGIL*LLALLV
Trigger: GACAAGAAGAGCAAGAAGCAACAGGATTCCACCTAC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATTCTCCTTGATATGTTaGCCTGTATCTGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: NVLNVMCSVRSISELDVTFSLIC*PVSVLP
Trigger: AGGGAGCACAGATACAGGCAAACATATCAAGGAGAA...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTTTCTCCTTGATATGTTaGCCTGTATCTGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRFSLIC*PVSVLP
Trigger: AGGGAGCACAGATACAGGCAAACATATCAAGGAGAA...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACACACGGAACTCCCCAGTaGGAGTATAATAGTCATTCT +
Preference number: 5 (lower is better)
Translates to: NVLNVMCSVRSISELDVTHGTPQ*EYNSHS
Trigger: AGAATGACTATTATACTCCAACTGGGGAGTTCCGTG...TGTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTCACGGAACTCCCCAGTaGGAGTATAATAGTCATTCT +
Preference number: 5 (lower is better)
Translates to: LQRPKCDVLSAKHIRAGRHGTPQ*EYNSHS
Trigger: AGAATGACTATTATACTCCAACTGGGGAGTTCCGTG...ACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACCACACGACGATCAGTTaGCAACTAAAAATAAAGGCC +
Preference number: 5 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDHTTIS*QLKIKA
Trigger: GGCCTTTATTTTTAGTTGCAAACTGATCGTCGTGTG...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS GCA 90 bp CATGACCTTCGCATCCTCTGGAGTATTATGACGAAGCCAATAATATaGTTCTCGGAAGTCATCAAATATGATCCTACTGCCATCCCCACC +
Preference number: 5 (lower is better)
Translates to: HDLRILWSIMTKPII*FSEVIKYDPTAIPT
Trigger: GGTGGGGATGGCAGTAGGATCATATTTGATGACTTCCGAGAAGCATATTATTGGCTTCGTCATAATACTCCAGAGGATGCGAAGGTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS GCA 90 bp CACAGATCCACTGTGTTCTCATCCCATATATCAGACTGTAACGACTaGTCAGATCTATACCCGCTTCCAATCATCTGTCTCAAGGCTTCT +
Preference number: 5 (lower is better)
Translates to: HRSTVFSSHISDCND*SDLYPLPIICLKAS
Trigger: AGAAGCCTTGAGACAGATGATTGGAAGCGGGTATAGATCTGAGCAGTCGTTACAGTCTGATATATGGGATGAGAACACAGTGGATCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529886.1
CDS CCA 90 bp CTTCATCCCAGGTCACTTTATACTAACATAATGGGGTGGGAGGTGTaGGAGACTGTGCAATGTAGCCACATCAATAGCCTAGTGTCATTA +
Preference number: 5 (lower is better)
Translates to: LHPRSLYTNIMGWEV*ETVQCSHINSLVSL
Trigger: TAATGACACTAGGCTATTGATGTGGCTACATTGCACAGTCTCCCACACCTCCCACCCCATTATGTTAGTATAAAGTGACCTGGGATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525946.5
CDS-3UTR CAA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACTTCTCCTTGATATGTTaGCCTGTATCTGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: IFNVLNVMCSVRSISELDFSLIC*PVSVLP
Trigger: AGGGAGCACAGATACAGGCAAACATATCAAGGAGAA...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACCATATCTCTCAGGGTTaGCAGCTGTTTTCTGGAATG +
Preference number: 5 (lower is better)
Translates to: IFNVLNVMCSVRSISELDHISQG*QLFSGM
Trigger: CATTCCAGAAAACAGCTGCAAACCCTGAGAGATATG...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS TCA 90 bp TATTATGACGAAGCCAATAATATGCTTCTCGGAAGTCATCAAATATaGTCCTACTGCCATCCCCACCACGGGCAGATAGTACAATGGACG +
Preference number: 5 (lower is better)
Translates to: YYDEANNMLLGSHQI*SYCHPHHGQIVQWT
Trigger: CGTCCATTGTACTATCTGCCCGTGGTGGGGATGGCAGTAGGATCATATTTGATGACTTCCGAGAAGCATATTATTGGCTTCGTCATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS CCA 90 bp TTTTTCCAGAGAGATGACGCTCCGGAAAAGAACTTCAAATTGTTGTaGATTCAACTTGCTGCGCAGGTAATCCACAAAGGCATGGATCTG +
Preference number: 5 (lower is better)
Translates to: FFQRDDAPEKNFKLL*IQLAAQVIHKGMDL
Trigger: CAGATCCATGCCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCTCTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526726.1
CDS-3UTR CAA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACACGGAACTCCCCAGTaGGAGTATAATAGTCATTCT +
Preference number: 5 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGHGTPQ*EYNSHS
Trigger: AGAATGACTATTATACTCCAACTGGGGAGTTCCGTG...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTTTGTACATGAGGCAGTaGAGCAGCACTGGAGAACCT +
Preference number: 5 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRALYMRQ*SSTGEP
Trigger: AGGTTCTCCAGTGCTGCTCAACTGCCTCATGTACAA...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTCCAGGTCCTTTACCTaGTATATCCTGACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: KIFNVLNVMCSVRSISELSRSFT*YILTSQ
Trigger: TTGGCTGGTCAGGATATACAAGGTAAAGGACCTGGA...CAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp ATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATTTATGTCCTaGACAAGCCTCGATTATCCA +
Preference number: 5 (lower is better)
Translates to: IFNVLNVMCSVRSISELDVTFMS*TSLDYP
Trigger: TGGATAATCGAGGCTTGTCAAGGACATAAATGTCAC...GTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp CAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGACGTGACATAGTAAATCAAATCTaGAGGCTAAATCTCACCCAC +
Preference number: 5 (lower is better)
Translates to: QRPKCDVLSAKHIRAGRDIVNQI*RLNLTH
Trigger: GTGGGTGAGATTTAGCCTCAAGATTTGATTTACTAT...GTCACGTCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTAGGTGGAATCCTGTaGCTTCTTGCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAVGGIL*LLALLV
Trigger: GACAAGAAGAGCAAGAAGCAACAGGATTCCACCTAC...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp TGGTTTGGAAGGCTAAGTGCCCTGGCTATACAAATATACAACAGCATATCCCTTTTCTCCTTGATATGTTaGCCTGTATCTGTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: WFGRLSALAIQIYNSISLFSLIC*PVSVLP
Trigger: AGGGAGCACAGATACAGGCAAACATATCAAGGAGAA...AAGGGATATGCTGTTGTATATTTGTATAGCCAGGGCACTTAGCCTTCCAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTTCCAGGTCCTTTACCTaGTATATCCTGACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRASRSFT*YILTSQ
Trigger: TTGGCTGGTCAGGATATACAAGGTAAAGGACCTGGA...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAGTGACATTTATGTCCTaGACAAGCCTCGATTATCCA +
Preference number: 5 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGVTFMS*TSLDYP
Trigger: TGGATAATCGAGGCTTGTCAAGGACATAAATGTCAC...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp AATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGGAACAACCACAAGAGTTTaGAGTAAAGGGTCATTCCTG +
Preference number: 5 (lower is better)
Translates to: NLQRPKCDVLSAKHIRAGTTTRV*SKGSFL
Trigger: CAGGAATGACCCTTTACTCAAAACTCTTGTGGTTGT...TCCAGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp CTGGCTATACAAATATACAACAGCATATCCCTTAGGAGCACCACTATGACTAATTGCTTCTTGCTCTTCTaGTCTGGACGACTTATGTCC +
Preference number: 5 (lower is better)
Translates to: LAIQIYNSISLRSTTMTNCFLLF*SGRLMS
Trigger: GGACATAAGTCGTCCAGACAAGAAGAGCAAGAAGCA...ATTAGTCATAGTGGTGCTCCTAAGGGATATGCTGTTGTATATTTGTATAGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAATTGTACATGAGGCAGTaGAGCAGCACTGGAGAACCT +
Preference number: 5 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQLYMRQ*SSTGEP
Trigger: AGGTTCTCCAGTGCTGCTCAACTGCCTCATGTACAA...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS CCA 90 bp GCCATAATCCCACCAGGACATGACCTTCGCATCCTGAAAGTAGAATaGGAAATGGAAATAACAAGCTTCTCACTGTCTCTAAAAATCAAA +
Preference number: 5 (lower is better)
Translates to: AIIPPGHDLRILKVE*EMEITSFSLSLKIK
Trigger: TTTGATTTTTAGAGACAGTGAGAAGCTTGTTATTTCCATTTCCCATTCTACTTTCAGGATGCGAAGGTCATGTCCTGGTGGGATTATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525946.5
CDS-3UTR CAA 90 bp AAATGTCCTCAAGGACCACTGTGCTTCCCAGTTAAATTGTTTTTGTTTAGACAAGAATCCTGTTGCTTCTaGCTCTTCTTGTCTGGACGA +
Preference number: 5 (lower is better)
Translates to: KCPQGPLCFPVKLFLFRQESCCF*LFLSGR
Trigger: TCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATTC...TTGTCTAAACAAAAACAATTTAACTGGGAAGCACAGTGGTCCTTGAGGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTGTAGGTGGAATCCTGTaGCTTCTTGCTCTTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSVGGIL*LLALLV
Trigger: GACAAGAAGAGCAAGAAGCAACAGGATTCCACCTAC...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp AAAAATCTTCAACGTCCTAAATGTGATGTGCTCAGTGCGAAGCATATCAGAGCTGTGACATTTATGTCCTaGACAAGCCTCGATTATCCA +
Preference number: 5 (lower is better)
Translates to: KNLQRPKCDVLSAKHIRAVTFMS*TSLDYP
Trigger: TGGATAATCGAGGCTTGTCAAGGACATAAATGTCAC...AGCTCTGATATGCTTCGCACTGAGCACATCACATTTAGGACGTTGAAGATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS-3UTR CAA 90 bp TTAAATTGTTTTTGTTTAGACAAGATTTCACTGTCGCCCAGACTGGAGTACAGTCACGGAACTCCCCAGTaGGAGTATAATAGTCATTCT +
Preference number: 5 (lower is better)
Translates to: LNCFCLDKISLSPRLEYSHGTPQ*EYNSHS
Trigger: AGAATGACTATTATACTCCAACTGGGGAGTTCCGTG...ACTGTACTCCAGTCTGGGCGACAGTGAAATCTTGTCTAAACAAAAACAATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp AGCATATCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCGTGACATTTATGTCCTaGACAAGCCTCGATTATCCA +
Preference number: 5 (lower is better)
Translates to: SISLRSTTMTNLKVMQFLVTFMS*TSLDYP
Trigger: TGGATAATCGAGGCTTGTCAAGGACATAAATGTCAC...GAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp TCCCTTAGGAGCACCACTATGACTAATCTAAAAGTTATGCAATTCCTCCTGTTCATAGTAAATCAAATCTaGAGGCTAAATCTCACCCAC +
Preference number: 5 (lower is better)
Translates to: SLRSTTMTNLKVMQFLLFIVNQI*RLNLTH
Trigger: GTGGGTGAGATTTAGCCTCAAGATTTGATTTACTAT...GAACAGGAGGAATTGCATAACTTTTAGATTAGTCATAGTGGTGCTCCTAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp ATGCAAAGGGTTATGACAAAACTGTCTGTAAATGTAGGATCTGAATTGGTCTTTACAACCACAAGAGTTTaGAGTAAAGGGTCATTCCTG +
Preference number: 5 (lower is better)
Translates to: MQRVMTKLSVNVGSELVFTTTRV*SKGSFL
Trigger: CAGGAATGACCCTTTACTCAAAACTCTTGTGGTTGT...AAAGACCAATTCAGATCCTACATTTACAGACAGTTTTGTCATAACCCTTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS-3UTR CAA 90 bp CAGAAAGGCACTCTTCTAGCACTCTTCTGGTCCCACATTTATTCATTCAATAAAAACATGGTATATAAATaGGTTTGGAAGGCTAAGTGC +
Preference number: 5 (lower is better)
Translates to: QKGTLLALFWSHIYSFNKNMVYK*VWKAKC
Trigger: GCACTTAGCCTTCCAAACCAATTTATATACCATGTT...TTTATTGAATGAATAAATGTGGGACCAGAAGAGTGCTAGAAGAGTGCCTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000649491.1
CDS TCA 90 bp GATAAACCAATAATTTCACTGTTTGTCTTGAGTCTTCAAAACTGCTaGTTTATAAAGTCAAAGAGCGTCTTGTATATCCTGACCAGCCAA +
Preference number: 5 (lower is better)
Translates to: DKPIISLFVLSLQNC*FIKSKSVLYILTSQ
Trigger: TTGGCTGGTCAGGATATACAAGACGCTCTTTGACTTTATAAATCAGCAGTTTTGAAGACTCAAGACAAACAGTGAAATTATTGGTTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526364.1
CDS CCA 72 bp GCGCGCCTCGGTGAGCCAAGGCTACACCAGAGAGAGTaGGAACGTCTCGCAGCTCTTCGAACTTGTTGCCTC +
Preference number: 6 (lower is better)
Translates to: ARLGEPRLHQRE*ERLAALRTCCL
Trigger: GAGGCAACAAGTTCGAAGAGCTGCGAGACGTTCCCACTCTCTCTGGTGTAGCCTTGGCTCACCGAGGCGCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS TCA 72 bp TTATCCTCAGGCACTTCCACTCCCTGCGCGCCTCGGTaGGCCAAGGCTACACCAGAGAGAGTGGGAACGTCT +
Preference number: 6 (lower is better)
Translates to: LSSGTSTPCAPR*AKATPERVGTS
Trigger: AGACGTTCCCACTCTCTCTGGTGTAGCCTTGGCTCACCGAGGCGCGCAGGGAGTGGAAGTGCCTGAGGATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS GCA 72 bp AACACACGACGATCAGCAACCTGCTCTCCTCAACTGTaGCCTGCAAGCTGTGGCATCTCCTGCCACCCTGCC +
Preference number: 6 (lower is better)
Translates to: NTRRSATCSPQL*PASCGISCHPA
Trigger: GGCAGGGTGGCAGGAGATGCCACAGCTTGCAGGGCACAGTTGAGGAGAGCAGGTTGCTGATCGTCGTGTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS CCA 72 bp TCCTACTGCCATCCCCACCACGGGCAGATAGTACAATaGACGGAGAAGAGTAGGCCTCACTGGTCACCCAGG +
Preference number: 6 (lower is better)
Translates to: SYCHPHHGQIVQ*TEKSRPHWSPR
Trigger: CCTGGGTGACCAGTGAGGCCTACTCTTCTCCGTCCATTGTACTATCTGCCCGTGGTGGGGATGGCAGTAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392708.9
ENST00000524639.5
ENST00000529196.5
ENST00000531491.5
ENST00000531599.1
ENST00000649491.1
CDS GCA 72 bp TCTCCTCAACTGTGCCCTGCAAGCTGTGGCATCTCCTaGCACCCTGCCTCTAGTTTCCCAGACTGCAATTTC +
Preference number: 6 (lower is better)
Translates to: SPQLCPASCGIS*HPASSFPDCNF
Trigger: GAAATTGCAGTCTGGGAAACTAGAGGCAGGGTGGCAGGAGATGCCACAGCTTGCAGGGCACAGTTGAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS CCA 72 bp AGCCCAGCCCCTGCATCCTTGAGCTCTTTGGTAAGGTaGTACGTGACGATGGTGGTGAAGGAGGAGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SPAPASLSSLVR*YVTMVVKEEKR
Trigger: TCTCTTCTCCTCCTTCACCACCATCGTCACGTACCACCTTACCAAAGAGCTCAAGGATGCAGGGGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392708.9
ENST00000526213.5
ENST00000529196.5
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS TCA 72 bp AGTAGGCCACATAGATCCGGTGAGAGAAACGGCCTGTaGGCATCAGCACGAGGACGTGGAGAGGAATTAAGT +
Preference number: 6 (lower is better)
Translates to: SRPHRSGERNGL*ASARGRGEELS
Trigger: ACTTAATTCCTCTCCACGTCCTCGTGCTGATGCTCACAGGCCGTTTCTCTCACCGGATCTATGTGGCCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000392708.9
ENST00000525431.1
ENST00000526213.5
ENST00000527456.1
ENST00000529196.5
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS CCA 72 bp GTAACACATCTTGTACATGAGGCAGTTGAGCAGCACTaGAGAACCTTCACGGTCCACACGGAACTCCCCAGT +
Preference number: 6 (lower is better)
Translates to: VTHLVHEAVEQH*RTFTVHTELPS
Trigger: ACTGGGGAGTTCCGTGTGGACCGTGAAGGTTCTCCAGTGCTGCTCAACTGCCTCATGTACAAGATGTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000392708.9
ENST00000525946.5
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS CAA 72 bp GAGAGAGTGGGAACGTCTCGCAGCTCTTCGAACTTGTaGCCTCTACCACTCACGCAGTTTCCTATTCTCCCA +
Preference number: 6 (lower is better)
Translates to: ERVGTSRSSSNL*PLPLTQFPILP
Trigger: TGGGAGAATAGGAAACTGCGTGAGTGGTAGAGGCAACAAGTTCGAAGAGCTGCGAGACGTTCCCACTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS CAA 72 bp CCAGAGAGAGTGGGAACGTCTCGCAGCTCTTCGAACTaGTTGCCTCTACCACTCACGCAGTTTCCTATTCTC +
Preference number: 6 (lower is better)
Translates to: PERVGTSRSSSN*LPLPLTQFPIL
Trigger: GAGAATAGGAAACTGCGTGAGTGGTAGAGGCAACAAGTTCGAAGAGCTGCGAGACGTTCCCACTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS GCA 72 bp AGAGAGTGGGAACGTCTCGCAGCTCTTCGAACTTGTTaGCTCTACCACTCACGCAGTTTCCTATTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: REWERLAALRTC*LYHSRSFLFSH
Trigger: ATGGGAGAATAGGAAACTGCGTGAGTGGTAGAGGCAACAAGTTCGAAGAGCTGCGAGACGTTCCCACTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS TCA 72 bp GACAATCGCAAAAATCCAAACTTAGTCATCTTGACATaGATGGGTGGCAACACACGACGATCAGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: DNRKNPNLVILT*MGGNTRRSAGR
Trigger: CCGGCCAGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTGCGATTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000534472.5
CDS TCA 72 bp AAACATGAAGACGAGGAGCTGCAGGTCAAAATAGTATaGGGACCAGGTTGTGGGCTGATGCTCAGACACAGA +
Preference number: 6 (lower is better)
Translates to: KHEDEELQVKIV*GPGCGLMLRHR
Trigger: TCTGTGTCTGAGCATCAGCCCACAACCTGGTCCTCATACTATTTTGACCTGCAGCTCCTCGTCTTCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000392708.9
ENST00000524639.5
ENST00000526726.1
ENST00000529196.5
ENST00000531001.1
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS TCA 72 bp GCCATTTCAGAACACGAGGCCACATACCTGGAAACATaGAGACGAGGAGCTGCAGGTCAAAATAGTATGAGG +
Preference number: 6 (lower is better)
Translates to: AISEHEATYLET*RRGAAGQNSMR
Trigger: CCTCATACTATTTTGACCTGCAGCTCCTCGTCTTCATGTTTCCAGGTATGTGGCCTCGTGTTCTGAAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534472.5
CDS CCA 72 bp TGTCTGGACGACTTATGTCCAGATTCTTCATGTATGTaGACAGCACCTGGGAGACTCCAATGCCAGAGAGAA +
Preference number: 6 (lower is better)
Translates to: CLDDLCPDSSCM*TAPGRLQCQRE
Trigger: TTCTCTCTGGCATTGGAGTCTCCCAGGTGCTGTCCACATACATGAAGAATCTGGACATAAGTCGTCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000524639.5
ENST00000526726.1
ENST00000529196.5
ENST00000531491.5
ENST00000531599.1
ENST00000649491.1
CDS CAA 90 bp GACAAAGCCTACCAGAGAGATGACGCTCCGGAAAAGAACTTCAAATaGTTGTGGATTCAACTTGCTGCGCAGGTAATCCACAAAGGCATG +
Preference number: 6 (lower is better)
Translates to: DKAYQRDDAPEKNFK*LWIQLAAQVIHKGM
Trigger: CATGCCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCTCTGGTAGGCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000525431.1
ENST00000529196.5
ENST00000531001.1
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS GCA 72 bp CGAGACCATGTAGAAATAAGCAAGGGCACACTTAGCTaGCCAACAGATGGAACCAGTCTTTACTGCCTTGAT +
Preference number: 6 (lower is better)
Translates to: RDHVEISKGTLS*PTDGTSLYCLD
Trigger: ATCAAGGCAGTAAAGACTGGTTCCATCTGTTGGGCAGCTAAGTGTGCCCTTGCTTATTTCTACATGGTCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000526213.5
ENST00000527456.1
ENST00000529196.5
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS CCA 72 bp CAAAAATCCAAACTTAGTCATCTTGACATGAATGGGTaGCAACACACGACGATCAGCTGGCCGGCTTTCCTA +
Preference number: 6 (lower is better)
Translates to: QKSKLSHLDMNG*QHTTISWPAFL
Trigger: TAGGAAAGCCGGCCAGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392708.9
ENST00000534472.5
CDS TCA 72 bp GAAGCCAATAATATGCTTCTCGGAAGTCATCAAATATaGTCCTACTGCCATCCCCACCACGGGCAGATAGTA +
Preference number: 6 (lower is better)
Translates to: EANNMLLGSHQI*SYCHPHHGQIV
Trigger: TACTATCTGCCCGTGGTGGGGATGGCAGTAGGATCATATTTGATGACTTCCGAGAAGCATATTATTGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS TCA 72 bp GACAATCGCAAAAATCCAAACTTAGTCATCTTGACATaGATGGGTGGCAACACACGACGATCAGCAACCTGC +
Preference number: 6 (lower is better)
Translates to: DNRKNPNLVILT*MGGNTRRSATC
Trigger: GCAGGTTGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTGCGATTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS CCA 72 bp AGAGATGACGCTCCGGAAAAGAACTTCAAATTGTTGTaGATTCAACTTGCTGCGCAGGTAATCCACAAAGGC +
Preference number: 6 (lower is better)
Translates to: RDDAPEKNFKLL*IQLAAQVIHKG
Trigger: GCCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000392708.9
ENST00000525431.1
ENST00000526726.1
ENST00000529196.5
ENST00000531001.1
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS CCA 72 bp CTTATGTCCAGATTCTTCATGTATGTGGACAGCACCTaGGAGACTCCAATGCCAGAGAGAATGCACATAACA +
Preference number: 6 (lower is better)
Translates to: LMSRFFMYVDST*ETPMPERMHIT
Trigger: TGTTATGTGCATTCTCTCTGGCATTGGAGTCTCCCAGGTGCTGTCCACATACATGAAGAATCTGGACATAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000524639.5
ENST00000526726.1
ENST00000529196.5
ENST00000531491.5
ENST00000531599.1
ENST00000649491.1
CDS CCA 72 bp CAAAAATCCAAACTTAGTCATCTTGACATGAATGGGTaGCAACACACGACGATCAGCAACCTGCTCTCCTCA +
Preference number: 6 (lower is better)
Translates to: QKSKLSHLDMNG*QHTTISNLLSS
Trigger: TGAGGAGAGCAGGTTGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525652.5
CDS CCA 72 bp AGGTCACTTTATACTAACATAATGGGGTGGGAGGTGTaGGAGACTGTGCAATGTAGCCACATCAATAGCCTA +
Preference number: 6 (lower is better)
Translates to: RSLYTNIMGWEV*ETVQCSHINSL
Trigger: TAGGCTATTGATGTGGCTACATTGCACAGTCTCCCACACCTCCCACCCCATTATGTTAGTATAAAGTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525946.5
CDS CAA 72 bp TACCAGAGAGATGACGCTCCGGAAAAGAACTTCAAATaGTTGTGGATTCAACTTGCTGCGCAGGTAATCCAC +
Preference number: 6 (lower is better)
Translates to: YQRDDAPEKNFK*LWIQLAAQVIH
Trigger: GTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCTCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000525431.1
ENST00000529196.5
ENST00000531001.1
ENST00000531491.5
ENST00000534472.5
ENST00000649491.1
CDS CAA 72 bp CGAAGCATATCAGAGCTGGACGTGACATTTATGTCCTaGACAAGCCTCGATTATCCAGGTCCTTTACCTTGT +
Preference number: 6 (lower is better)
Translates to: RSISELDVTFMS*TSLDYPGPLPC
Trigger: ACAAGGTAAAGGACCTGGATAATCGAGGCTTGTCAAGGACATAAATGTCACGTCCAGCTCTGATATGCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000392708.9
ENST00000525946.5
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS CAA 72 bp TTCCAGAGAGATGACGCTCCGGAAAAGAACTTCAAATaGTTGTGGATTCAACTTGCTGCGCAGGTAATCCAC +
Preference number: 6 (lower is better)
Translates to: FQRDDAPEKNFK*LWIQLAAQVIH
Trigger: GTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCTCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526726.1
CDS CAA 90 bp CATCCCACTTGCCACTTCATTCTTAATAGGGTAGGTGGAATCCTGTaGCTTCTTGCTCTTCTTGTCTGGACGACTTATGTCCAGATTCTT +
Preference number: 6 (lower is better)
Translates to: HPTCHFILNRVGGIL*LLALLVWTTYVQIL
Trigger: AAGAATCTGGACATAAGTCGTCCAGACAAGAAGAGCAAGAAGCAACAGGATTCCACCTACCCTATTAAGAATGAAGTGGCAAGTGGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000392708.9
ENST00000524639.5
ENST00000526726.1
ENST00000529196.5
ENST00000531491.5
ENST00000531599.1
ENST00000649491.1
CDS GCA 72 bp ACTGTGTTCTCATCCCATATATCAGACTGTAACGACTaGTCAGATCTATACCCGCTTCCAATCATCTGTCTC +
Preference number: 6 (lower is better)
Translates to: TVFSSHISDCND*SDLYPLPIICL
Trigger: GAGACAGATGATTGGAAGCGGGTATAGATCTGAGCAGTCGTTACAGTCTGATATATGGGATGAGAACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529886.1
CDS CCA 72 bp CAAAAATCCAAACTTAGTCATCTTGACATGAATGGGTaGCAACACACGACGATCAGCTTTATCCTCAGGCAC +
Preference number: 6 (lower is better)
Translates to: QKSKLSHLDMNG*QHTTISFILRH
Trigger: GTGCCTGAGGATAAAGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS CAA 90 bp GAGATATTTTTCCAGAGAGATGACGCTCCGGAAAAGAACTTCAAATaGTTGTGGATTCAACTTGCTGCGCAGGTAATCCACAAAGGCATG +
Preference number: 6 (lower is better)
Translates to: EIFFQRDDAPEKNFK*LWIQLAAQVIHKGM
Trigger: CATGCCTTTGTGGATTACCTGCGCAGCAAGTTGAATCCACAACAATTTGAAGTTCTTTTCCGGAGCGTCATCTCTCTGGAAAAATATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526726.1
CDS TCA 72 bp GACAATCGCAAAAATCCAAACTTAGTCATCTTGACATaGATGGGTGGCAACACACGACGATCAGCTTTATCC +
Preference number: 6 (lower is better)
Translates to: DNRKNPNLVILT*MGGNTRRSALS
Trigger: GGATAAAGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTGCGATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527606.5
CDS TCA 72 bp GACAATCGCAAAAATCCAAACTTAGTCATCTTGACATaGATGGGTGGCAACACACGACGATCAGTTTGCAAC +
Preference number: 6 (lower is better)
Translates to: DNRKNPNLVILT*MGGNTRRSVCN
Trigger: GTTGCAAACTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTGCGATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529196.5
CDS TCA 72 bp GACAATCGCAAAAATCCAAACTTAGTCATCTTGACATaGATGGGTGGCAACACACGACGATCAGCTGATAAC +
Preference number: 6 (lower is better)
Translates to: DNRKNPNLVILT*MGGNTRRSADN
Trigger: GTTATCAGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTGCGATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529886.1
CDS GCA 72 bp CGCATCCTCTGGAGTATTATGACGAAGCCAATAATATaGTTCTCGGAAGTCATCAAATATGATCCTACTGCC +
Preference number: 6 (lower is better)
Translates to: RILWSIMTKPII*FSEVIKYDPTA
Trigger: GGCAGTAGGATCATATTTGATGACTTCCGAGAAGCATATTATTGGCTTCGTCATAATACTCCAGAGGATGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392708.9
ENST00000529196.5
ENST00000531491.5
ENST00000649491.1
CDS TCA 72 bp ACTGTTGAACTTCTGACTTCTGCTCAGCTTCATACATaGGAAAATTTGCTTAGCCGTCCTCTGTATTACACA +
Preference number: 6 (lower is better)
Translates to: TVELLTSAQLHT*ENLLSRPLYYT
Trigger: TGTGTAATACAGAGGACGGCTAAGCAAATTTTCTCATGTATGAAGCTGAGCAGAAGTCAGAAGTTCAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534472.5
CDS TCA 72 bp GACAATCGCAAAAATCCAAACTTAGTCATCTTGACATaGATGGGTGGCAACACACGACGATCAGCTTATTTT +
Preference number: 6 (lower is better)
Translates to: DNRKNPNLVILT*MGGNTRRSAYF
Trigger: AAAATAAGCTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTGCGATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649491.1
CDS TCA 72 bp ACGCACAAGGTAAAGTATCTTCATTATATGACTGGATaGTTCCACACATTTAACCCAGCAATTCCACTTCCA +
Preference number: 6 (lower is better)
Translates to: THKVKYLHYMTG*FHTFNPAIPLP
Trigger: TGGAAGTGGAATTGCTGGGTTAAATGTGTGGAATCATCCAGTCATATAATGAAGATACTTTACCTTGTGCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531599.1
CDS CAA 90 bp CTTATAACACAAATGACAAATGAACAGAAAACTGTGAGGCTGAACTaGCCAATATCTACAACTGTTGAACTTCTGACTTCTGCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LITQMTNEQKTVRLN*PISTTVELLTSAQL
Trigger: AAGCTGAGCAGAAGTCAGAAGTTCAACAGTTGTAGATATTGGCAAGTTCAGCCTCACAGTTTTCTGTTCATTTGTCATTTGTGTTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534472.5
CDS CCA 72 bp CAAAAATCCAAACTTAGTCATCTTGACATGAATGGGTaGCAACACACGACGATCAGTTTGCAACTAAAAATA +
Preference number: 6 (lower is better)
Translates to: QKSKLSHLDMNG*QHTTISLQLKI
Trigger: TATTTTTAGTTGCAAACTGATCGTCGTGTGTTGCCACCCATTCATGTCAAGATGACTAAGTTTGGATTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529196.5