RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STS (Homo sapiens)

Ensembl gene IDs: ENSG00000101846

Ensembl transcript IDs: ENST00000217961.5, ENST00000658154.1, ENST00000660000.2, ENST00000664306.2, ENST00000666110.2, ENST00000674429.1, ENST00000674499.1

Found 778 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACCCACTGCATCCACCGTGTCAGGCATCTTCCCCAATCCAGTCTaGTGTGAGGTTGTGAGGGTGACGAGGTGCAACCATTGTATCTGC +
Preference number: 1 (lower is better)
Translates to: PPTASTVSGIFPNPV*CEVVRVTRCNHCIC
Trigger: GCAGATACAATGGTTGCACCTCGTCACCCTCACAACCTCACAGCAGACTGGATTGGGGAAGATGCCTGACACGGTGGATGCAGTGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 90 bp CACTGCATCCACCGTGTCAGGCATCTTCCCCAATCCAGTCTGCTGTaGGGTTGTGAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCT +
Preference number: 1 (lower is better)
Translates to: HCIHRVRHLPQSSLL*GCEGDEVQPLYLLA
Trigger: AGCAAGCAGATACAATGGTTGCACCTCGTCACCCTCACAACCTCACAGCAGACTGGATTGGGGAAGATGCCTGACACGGTGGATGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 90 bp AGGGCAACTGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATaGCCCTCTTGCTCCAACTTCCCAGGGTTGTGGGTAGGGATAGAG +
Preference number: 1 (lower is better)
Translates to: RATGEMLSNPPSPIV*PSCSNFPGLWVGIE
Trigger: CTCTATCCCTACCCACAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCAGTTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 90 bp ATCTTCCCCAATCCAGTCTGCTGTGAGGTTGTGAGGGTGACGAGGTaGAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGGGAC +
Preference number: 1 (lower is better)
Translates to: IFPNPVCCEVVRVTR*NHCICLLGLSAQRD
Trigger: GTCCCGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTCACAACCTCACAGCAGACTGGATTGGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR CCA 90 bp GCCCAGATTGGGCCTGGGAGAAGGTTGAGGAGCTTGGCTAAAGTTTaGCCAAGTGGAGAATCTTTGTCCATGAAGCCTCAGATGGATGTG +
Preference number: 1 (lower is better)
Translates to: AQIGPGRRLRSLAKV*PSGESLSMKPQMDV
Trigger: CACATCCATCTGAGGCTTCATGGACAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 90 bp GCATCTGCAGAACAGAGCCTAGCAGAGAAATATTTCAGTCTCCACTaGGCACTATGCATGGGCCACAGTCAGGCAGAAATCCTGCAAGGG +
Preference number: 1 (lower is better)
Translates to: ASAEQSLAEKYFSLH*ALCMGHSQAEILQG
Trigger: CCCTTGCAGGATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTCTCTGCTAGGCTCTGTTCTGCAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR GCA 90 bp CTTCCCAAGGCAGGCAAGCGTATTCTAGCTCACTGCAAATGCATCTaGAGAACAGAGCCTAGCAGAGAAATATTTCAGTCTCCACTGAGC +
Preference number: 1 (lower is better)
Translates to: LPKAGKRILAHCKCI*RTEPSREIFQSPLS
Trigger: GCTCAGTGGAGACTGAAATATTTCTCTGCTAGGCTCTGTTCTGCAGATGCATTTGCAGTGAGCTAGAATACGCTTGCCTGCCTTGGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CCA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTaGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCA +
Preference number: 1 (lower is better)
Translates to: AHVLSCKLSGPSLVI*WHQQDRDIVRCREP
Trigger: TGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 90 bp GACTTGGCTTGGAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATaGAAGTTGTCCATGGGGTCTTGCAGACATGCATCGTTGCAAATG +
Preference number: 1 (lower is better)
Translates to: DLAWSVKARMSACIR*KLSMGSCRHASLQM
Trigger: CATTTGCAACGATGCATGTCTGCAAGACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTCCAAGCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 90 bp GATGCAGAGAGCCATCGAAGTTGTCTGACTTGGTGGAAACAAATGTaGCTTGGCTTGGAGTGTCAAAGCAAGAATGAGTGCGTGCATCAG +
Preference number: 1 (lower is better)
Translates to: DAESHRSCLTWWKQM*LGLECQSKNECVHQ
Trigger: CTGATGCACGCACTCATTCTTGCTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 90 bp GTTGCCTCAAAGCTTCCCAAGGCAGGCAAGCGTATTCTAGCTCACTaGAAATGCATCTGCAGAACAGAGCCTAGCAGAGAAATATTTCAG +
Preference number: 1 (lower is better)
Translates to: VASKLPKAGKRILAH*KCICRTEPSREIFQ
Trigger: CTGAAATATTTCTCTGCTAGGCTCTGTTCTGCAGATGCATTTGCAGTGAGCTAGAATACGCTTGCCTGCCTTGGGAAGCTTTGAGGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR TCA 90 bp TGGGTTACATTACAGGTGTCCCATTCATGGGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATAGAAGGTGGTCAGACAAGTCCACAA +
Preference number: 1 (lower is better)
Translates to: WVTLQVSHSWALSWN*ANSGQIEGGQTSPQ
Trigger: TTGTGGACTTGTCTGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGGGACACCTGTAATGTAACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 90 bp TTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGCAAGAATaGGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCTTGCAGAC +
Preference number: 1 (lower is better)
Translates to: LVETNVTWLGVSKQE*VRASDESCPWGLAD
Trigger: GTCTGCAAGACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 90 bp GCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTaGCTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGCA +
Preference number: 1 (lower is better)
Translates to: AGQRYSEMQRAIEVV*LGGNKCDLAWSVKA
Trigger: TGCTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 90 bp TTCTGCACCTTTTTGTCATCTGCTTGCACTGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTCTGGCCA +
Preference number: 1 (lower is better)
Translates to: FCTFLSSACTGVPCE*PSIHSISMSPRLWP
Trigger: TGGCCAGAGTCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAGATGACAAAAAGGTGCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 90 bp TCTCTGGTCATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATaGAGAGAGCCATCGAAGTTGTCTGACTTGGTGGAAACAAATGTG +
Preference number: 1 (lower is better)
Translates to: SLVIWWHQQDRDIVR*REPSKLSDLVETNV
Trigger: CACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAATGACCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 90 bp ATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTaGAAACCGCTGTGTGGGTTACATTACAGGTGTCCCATTCATGGG +
Preference number: 1 (lower is better)
Translates to: IIANFQKAQVMANIL*KPLCGLHYRCPIHG
Trigger: CCCATGAATGGGACACCTGTAATGTAACCCACACAGCGGTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 90 bp CTTCAGGTGATAAAATGGAGAATCAGTCCAAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTGCCACTCTCAGGCGTGTTTGTAGTG +
Preference number: 1 (lower is better)
Translates to: LQVIKWRISPNPRCR*SYVSPVPLSGVFVV
Trigger: CACTACAAACACGCCTGAGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTCTCCATTTTATCACCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 90 bp ACAGGTGTCCCATTCATGGGCACTGTCTTGGAATTGAGCAAACTCTaGGCAAATAGAAGGTGGTCAGACAAGTCCACAAAAGAGATAAAT +
Preference number: 1 (lower is better)
Translates to: TGVPFMGTVLELSKL*ANRRWSDKSTKEIN
Trigger: ATTTATCTCTTTTGTGGACTTGTCTGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGGGACACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 90 bp AAGGTGGTCAGACAAGTCCACAAAAGAGATAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGATTTTGCCATAAAGGAATCCAATCAC +
Preference number: 1 (lower is better)
Translates to: KVVRQVHKRDKCISR*MAASLDFAIKESNH
Trigger: GTGATTGGATTCCTTTATGGCAAAATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTTATCTCTTTTGTGGACTTGTCTGACCACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 90 bp ACATTGCTAAATACCAAAGACAAGCTAGCTATTTCTTACTTTGCATaGGGCTTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTC +
Preference number: 1 (lower is better)
Translates to: TLLNTKDKLAISYFA*GLPTSFLVNCLDHL
Trigger: GAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTGTCTTTGGTATTTAGCAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 90 bp TATTGCATCACTGCAGATTATAGAGTAAATGGTAACTTATACTGTTaGCATAGGTATTTGCTGAGGGGTGAGTTAAGGTACCTCCTGCAC +
Preference number: 1 (lower is better)
Translates to: YCITADYRVNGNLYC*HRYLLRGELRYLLH
Trigger: GTGCAGGAGGTACCTTAACTCACCCCTCAGCAAATACCTATGTCAACAGTATAAGTTACCATTTACTCTATAATCTGCAGTGATGCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 90 bp TGCCATAAAGGAATCCAATCACATTGTTGGGGAAAGTCTTATATCTaGAGAAATGATTGCACTTTACATTCCATAGGAGGCTTTCCTCAG +
Preference number: 1 (lower is better)
Translates to: CHKGIQSHCWGKSYI*RNDCTLHSIGGFPQ
Trigger: CTGAGGAAAGCCTCCTATGGAATGTAAAGTGCAATCATTTCTTCAGATATAAGACTTTCCCCAACAATGTGATTGGATTCCTTTATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 90 bp TTAAACATTGCTAAATACCAAAGACAAGCTAGCTATTTCTTACTTTaGATGAGGCTTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCA +
Preference number: 1 (lower is better)
Translates to: LNIAKYQRQASYFLL*MRLAHVLSCKLSGP
Trigger: TGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTGTCTTTGGTATTTAGCAATGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 90 bp AAAGGAAATTATGCTTATGTGTATAGATCATGGATTGCTTGTGAGTaGTTTTTGTTCCCCTCCAAATATCAGAGACTTTCTAGGCCAATG +
Preference number: 1 (lower is better)
Translates to: KGNYAYVYRSWIACE*FLFPSKYQRLSRPM
Trigger: CATTGGCCTAGAAAGTCTCTGATATTTGGAGGGGAACAAAAATCACTCACAAGCAATCCATGATCTATACACATAAGCATAATTTCCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 90 bp TTCCCCAAAGAAAACAGTGGAATCCAAGAATTATACTACAAATTATaGAATGGAAAGCAGTTCAGGAGAGATTTGCCTTGGGATTATTAT +
Preference number: 1 (lower is better)
Translates to: FPKENSGIQELYYKL*NGKQFRRDLPWDYY
Trigger: ATAATAATCCCAAGGCAAATCTCTCCTGAACTGCTTTCCATTCCATAATTTGTAGTATAATTCTTGGATTCCACTGTTTTCTTTGGGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 90 bp TGCTGTGAGGTTGTGAGGGTGACGAGGTGCAACCATTGTATCTGCTaGCTTGGACTGTCTGCTCAACGGGACCCACTAGGAGGAAGACTC +
Preference number: 2 (lower is better)
Translates to: CCEVVRVTRCNHCIC*LGLSAQRDPLGGRL
Trigger: GAGTCTTCCTCCTAGTGGGTCCCGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTCACAACCTCACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCAGTTGAGTAGCTGTTaGGCTCTGGCCCAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQQLSSC*ALAQAF
Trigger: GAAGGCTTGGGCCAGAGCTCAACAGCTACTCAACTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCTCACCCCTCCAGTTaGGTAGCTGTTGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPHPSS*VAVELW
Trigger: CCAGAGCTCAACAGCTACTCAACTGGAGGGGTGAGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTTGCGCATTTTCCCTaGTTTACAGGGGCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVAHFP*FTGAWG
Trigger: CCCCCAAGCCCCTGTAAATCAGGGAAAATGCGCAAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGTAGCTGTTGAGCTCTaGCCCAAGCCTTCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQVAVEL*PKPSGD
Trigger: ATCACCTGAAGGCTTGGGCCAGAGCTCAACAGCTAC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCACTGGTGTGCCTTGTaGATGCCCCTCTATTCATTC +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQHWCAL*MPLYSF
Trigger: GAATGAATAGAGGGGCATTCACAAGGCACACCAGTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTAGCTGTTGAGCTCTaGCCCAAGCCTTCAGGTGAT +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVAVEL*PKPSGD
Trigger: ATCACCTGAAGGCTTGGGCCAGAGCTCAACAGCTAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTATTTGCTGAGGGGTaGGTTAAGGTACCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVFAEG*VKVPPA
Trigger: TGCAGGAGGTACCTTAACTCACCCCTCAGCAAATAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp ATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGCAATCCAGTCTGCTGTaGGGTTGTGAGGGTGACGAG +
Preference number: 2 (lower is better)
Translates to: IWWHQQDRDIVRCREPSKQSSLL*GCEGDE
Trigger: CTCGTCACCCTCACAACCTCACAGCAGACTGGATTG...CTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGAAGATGGTGAGCTTTaGCACATGCGTCTGTCTGGT +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQEDGEL*HMRLSG
Trigger: ACCAGACAGACGCATGTGGCAAAGCTCACCATCTTC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTTATGTTTCCCCAGTaGCACTCTCAGGCGTGTTTG +
Preference number: 2 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVMFPQ*HSQACL
Trigger: CAAACACGCCTGAGAGTGGCACTGGGGAAACATAAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCACCTTTTTGTCATCTaGTTGCACTGGTGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQHLFVI*LHWCAL
Trigger: CAAGGCACACCAGTGCAAGCAGATGACAAAAAGGTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAAGTGAGGGTGACGAGGTaGAACCATTGTATCTGCTTG +
Preference number: 2 (lower is better)
Translates to: LGISTLNPEELARSEVRKVRVTR*NHCICL
Trigger: CAAGCAGATACAATGGTTGCACCTCGTCACCCTCAC...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR CAA 90 bp GCTCAGGGATGGCAGCTCAGATCCGGAACAATTACAATTCAATACTaGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAA +
Preference number: 2 (lower is better)
Translates to: AQGWQLRSGTITIQY*GISTLNPEELARSE
Trigger: TTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAAGTATTGAATTGTAATTGTTCCGGATCTGAGCTGCCATCCCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGCTTGCTTGGACTGTCTaGTCAACGGGACCCACTAGG +
Preference number: 2 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRLAWTV*STGPTR
Trigger: CCTAGTGGGTCCCGTTGAGCAGACAGTCCAAGCAAG...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTCACCTGGGGGATGGTaGAGGCTGAGGAGCCTGATC +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPSPGGW*RLRSLI
Trigger: GATCAGGCTCCTCAGCCTCCACCATCCCCCAGGTGA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 90 bp CGCTGTGTGGGTTACATTACAGGTGTCCCATTCATGGGCACTGTCTaGGAATTGAGCAAACTCTGGGCAAATAGAAGGTGGTCAGACAAG +
Preference number: 2 (lower is better)
Translates to: RCVGYITGVPFMGTV*ELSKLWANRRWSDK
Trigger: CTTGTCTGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGGGACACCTGTAATGTAACCCACACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTaGCTCCAACTTCCCAGGGTTGTGGGTAGGGATAGAGAAATTATA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPL*LQLPRVVGRDREII
Trigger: TATAATTTCTCTATCCCTACCCACAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 90 bp AGAAGGTTGAGGAGCTTGGCTAAAGTTTGGCCAAGTGGAGAATCTTaGTCCATGAAGCCTCAGATGGATGTGAGGTCCGTAGAGGTCAGA +
Preference number: 2 (lower is better)
Translates to: RRLRSLAKVWPSGES*SMKPQMDVRSVEVR
Trigger: TCTGACCTCTACGGACCTCACATCCATCTGAGGCTTCATGGACAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCCTCACCCCTCCAGTTaGGTAGCTGTTGAGCTCTGG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPPHPSS*VAVELW
Trigger: CCAGAGCTCAACAGCTACTCAACTGGAGGGGTGAGG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGATCATGGATTGCTTGTaGGTGATTTTTGTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQIMDCL*VIFVPL
Trigger: GAGGGGAACAAAAATCACTCACAAGCAATCCATGAT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGGTGGTTTAGACTTTaGAACTATCTCCAGCTGTGC +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQWWFRL*NYLQLC
Trigger: GCACAGCTGGAGATAGTTTCAAAGTCTAAACCACCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQALSWN*ANSGQI
Trigger: TATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTTTTTGTCATCTGCTTaGACTGGTGTGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQFLSSA*TGVPCE
Trigger: TTCACAAGGCACACCAGTGCAAGCAGATGACAAAAA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAATGGCTAACATTCTCTaGAAACCGCTGTGTGGGTTA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQMANIL*KPLCGL
Trigger: TAACCCACACAGCGGTTTGCAGAGAATGTTAGCCAT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAAGCTGCATCCACCCACTaGATCCACCGTGTCAGGCAT +
Preference number: 2 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKAASTH*IHRVRH
Trigger: ATGCCTGACACGGTGGATGCAGTGGGTGGATGCAGC...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQNPRCR*SYVSPV
Trigger: CACTGGGGAAACATAACTCCATCTACACCTTGGATT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACAATTCAATACTTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTTGTCTGGACCATCTCTaGTCATTTGGTGGCATCAGC +
Preference number: 2 (lower is better)
Translates to: TIQYLGISTLNPEELARSCLDHL*SFGGIS
Trigger: GCTGATGCCACCAAATGACCAGAGATGGTCCAGACA...ACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAAGTATTGAATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR CAA 90 bp GTGGGTTACATTACAGGTGTCCCATTCATGGGCACTGTCTTGGAATaGAGCAAACTCTGGGCAAATAGAAGGTGGTCAGACAAGTCCACA +
Preference number: 2 (lower is better)
Translates to: VGYITGVPFMGTVLE*SKLWANRRWSDKST
Trigger: TGTGGACTTGTCTGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGGGACACCTGTAATGTAACCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCAGTTGAGTAGCTGTTaGGCTCTGGCCCAAGCCTTC +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPQLSSC*ALAQAF
Trigger: GAAGGCTTGGGCCAGAGCTCAACAGCTACTCAACTG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTTGGGGGAAATGGGATaGAAACAAAATCATGCATCT +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLGEMG*KQNHAS
Trigger: AGATGCATGATTTTGTTTTCATCCCATTTCCCCCAA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp GGAGGTAGGGAGCTCAGGGATGGCAGCTCAGATCCGGAACAATTACAATTCAATATTTCTTACTTTGCATaGGGCTTGCCCACGTCCTTT +
Preference number: 2 (lower is better)
Translates to: GGRELRDGSSDPEQLQFNISYFA*GLPTSF
Trigger: AAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAAT...ATTGAATTGTAATTGTTCCGGATCTGAGCTGCCATCCCTGAGCTCCCTACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATT +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQGVPCE*PSIHSI
Trigger: AATAGAATGAATAGAGGGGCATTCACAAGGCACACC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAACTATCTCCAGCTGTaGCACTACGAGGCCCTCTCC +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPNYLQL*HYEALS
Trigger: GGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGGGCAACTGGGGAAATaGTGTCAAATCCTCCCAGCC +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPGQLGK*CQILPA
Trigger: GGCTGGGAGGATTTGACAGCATTTCCCCAGTTGCCC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp GAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCCTGGTAACTGATAGATaGTGCATCCACCCACTGCAT +
Preference number: 2 (lower is better)
Translates to: ECQSKNECVHQMKVVHGVLVTDR*CIHPLH
Trigger: ATGCAGTGGGTGGATGCAGCATCTATCAGTTACCAG...GACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGGGGGTCTTGCAGACATaGATCGTTGCAAATGCAGTC +
Preference number: 2 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRGVLQT*IVANAV
Trigger: GACTGCATTTGCAACGATGCATGTCTGCAAGACCCC...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGACAGCATCTCCACAGTaGGCTTTTAATTCAGAACTT +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQTASPQ*AFNSEL
Trigger: AAGTTCTGAATTAAAAGCCCACTGTGGAGATGCTGT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGGGCAAATAGAAGGTaGTCAGACAAGTCCACAAAA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQWANRR*SDKSTK
Trigger: TTTTGTGGACTTGTCTGACCACCTTCTATTTGCCCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGAATTGAGCAAACTCTaGGCAAATAGAAGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQELSKL*ANRRWS
Trigger: TGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAAGAAAGCCCAAGTCATaGCTAACATTCTCTGCAAAC +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQRKPKS*LTFSAN
Trigger: GTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 90 bp CATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTaGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCA +
Preference number: 2 (lower is better)
Translates to: HQQDRDIVRCREPSK*SDLVETNVTWLGVS
Trigger: TGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGGTAACTTATACTGTTaGCATAGGTATTTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQGNLYC*HRYLLR
Trigger: CCTCAGCAAATACCTATGTCAACAGTATAAGTTACC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATTGGGGGAAATGGGATaGAAACAAAATCATGCATCT +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLGEMG*KQNHAS
Trigger: AGATGCATGATTTTGTTTTCATCCCATTTCCCCCAA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCTGGTGGAAACAAATGTaGCTTGGCTTGGAGTGTCAA +
Preference number: 2 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGWWKQM*LGLECQ
Trigger: TTGACACTCCAAGCCAAGTCACATTTGTTTCCACCA...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTTATGTTTCCCCAGTaGCACTCTCAGGCGTGTTTG +
Preference number: 2 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVMFPQ*HSQACL
Trigger: CAAACACGCCTGAGAGTGGCACTGGGGAAACATAAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCAGTAATAATGACTTaGCTTCCAATAACCAAAGTG +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPVIMT*LPITKV
Trigger: CACTTTGGTTATTGGAAGGCAAGTCATTATTACTGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp GAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCGACTCGAGCATGTTATaGAGCCAGATCTGTGAAACA +
Preference number: 2 (lower is better)
Translates to: ECQSKNECVHQMKVVHGVDSSML*SQICET
Trigger: TGTTTCACAGATCTGGCTGCATAACATGCTCGAGTC...GACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp GAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCACCATTGTATCTGCTTaGTTGGACTGTCTGCTCAAC +
Preference number: 2 (lower is better)
Translates to: ECQSKNECVHQMKVVHGVTIVSA*LDCLLN
Trigger: GTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGT...GACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR CAA 90 bp TATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAATaGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGACAGA +
Preference number: 2 (lower is better)
Translates to: YFLLCMRLAHVLSCK*SGPSLVIWWHQQDR
Trigger: TCTGTCCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGTTGCGCATTTTCCCTaGTTTACAGGGGCTTGGGGG +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILVAHFP*FTGAWG
Trigger: CCCCCAAGCCCCTGTAAATCAGGGAAAATGCGCAAC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATATGCAGCCAGATCTGTaGAACAACTTCTTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: AHVLSCKLSGPSLVIWWHMQPDL*NNFLSS
Trigger: TGAAGACAAGAAGTTGTTTCACAGATCTGGCTGCAT...ATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR TCA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGGTGTCAAAGCAAGAATaGGTGCGTGCATCAGATGAA +
Preference number: 2 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRVSKQE*VRASDE
Trigger: TTCATCTGATGCACGCACTCATTCTTGCTTTGACAC...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGATTGCCTTTTTATTATaGTGGTTATTGCATCACTGC +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQIAFLL*WLLHHC
Trigger: GCAGTGATGCAATAACCAGCATAATAAAAAGGCAAT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCAGTAATAATGACTTaGCTTCCAATAACCAAAGTG +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPVIMT*LPITKV
Trigger: CACTTTGGTTATTGGAAGGCAAGTCATTATTACTGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTATAGTATGCCCCTCTTaGTCCAACTTCCCAGGGTTG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPIVCPS*SNFPGL
Trigger: CAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTAT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGATTTTACAAGGAAGTaGCCAGATTGGGCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPDFTRK*PDWAWE
Trigger: CTCCCAGGCCCAATCTGGGCACTTCCTTGTAAAATC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGTGCAACCATTGTATCTaGTTGCTTGGACTGTCTGCT +
Preference number: 2 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQCNHCI*LLGLSA
Trigger: AGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCA...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATTGTCCTGAATGGTACTaGCTAGGTTTTCTTCTAGGG +
Preference number: 2 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNCPEWY*LGFLLG
Trigger: CCCTAGAAGAAAACCTAGGCAGTACCATTCAGGACA...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACTACAAATTATGGAATaGAAAGCAGTTCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLQIME*KAVQER
Trigger: TCTCTCCTGAACTGCTTTCCATTCCATAATTTGTAG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCCCAAAGAAAACAGTaGAATCCAAGAATTATACTA +
Preference number: 2 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPQRKQ*NPRIIL
Trigger: TAGTATAATTCTTGGATTCCACTGTTTTCTTTGGGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTACCCATTTGTCAATTTTaGCTTTTGCTGCCATTGCTT +
Preference number: 2 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVPICQF*LLLPLL
Trigger: AAGCAATGGCAGCAAAAGCCAAAATTGACAAATGGG...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CAA 90 bp GACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTGACTaGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGCAAGAA +
Preference number: 2 (lower is better)
Translates to: DRDIVRCREPSKLSD*VETNVTWLGVSKQE
Trigger: TTCTTGCTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTGCTTGCACTGGTGTaGCTTGTGAATGCCCCTCTA +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILLLALV*LVNAPL
Trigger: TAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAGGCTTTCCTCAGGATaGGCTGGTGGTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPRLSSG*AGGLDF
Trigger: AAAGTCTAAACCACCAGCCCATCCTGAGGAAAGCCT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCAAATGTGACTTGGCTTaGAGTGTCAAAGCAAGAATG +
Preference number: 2 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGKCDLA*SVKARM
Trigger: CATTCTTGCTTTGACACTCCAAGCCAAGTCACATTT...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGTATTTGCTGAGGGGTaGGTTAAGGTACCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILVFAEG*VKVPPA
Trigger: TGCAGGAGGTACCTTAACTCACCCCTCAGCAAATAC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATA +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPALSWN*ANSGQI
Trigger: TATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTGCTTGCACTGGTGTaGCTTGTGAATGCCCCTCTA +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLLALV*LVNAPL
Trigger: TAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAAGCAGACATGCATCGTTaGAAATGCAGTCTGGTAACT +
Preference number: 2 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKADMHR*KCSLVT
Trigger: AGTTACCAGACTGCATTTGCAACGATGCATGTCTGC...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CCA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAAGATGAAAGTTGTCCATaGGGTCTTGCAGACATGCAT +
Preference number: 2 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKDESCP*GLADMH
Trigger: ATGCATGTCTGCAAGACCCCATGGACAACTTTCATC...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATTGCTGCCATTGCTTTTaGTGTTTTAGACATGAAGTC +
Preference number: 2 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNCCHCF*CFRHEV
Trigger: GACTTCATGTCTAAAACACCAAAAGCAATGGCAGCA...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACACTGGTGTGCCTTGTaGATGCCCCTCTATTCATTC +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQHWCAL*MPLYSF
Trigger: GAATGAATAGAGGGGCATTCACAAGGCACACCAGTG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGTATTTGCTGAGGGGTaGGTTAAGGTACCTCCTGCA +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQVFAEG*VKVPPA
Trigger: TGCAGGAGGTACCTTAACTCACCCCTCAGCAAATAC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTATCATGGATTGCTTGTaGGTGATTTTTGTTCCCCTC +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPIMDCL*VIFVPL
Trigger: GAGGGGAACAAAAATCACTCACAAGCAATCCATGAT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTTTTTGTCATCTGCTTaGACTGGTGTGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPFLSSA*TGVPCE
Trigger: TTCACAAGGCACACCAGTGCAAGCAGATGACAAAAA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPNPRCR*SYVSPV
Trigger: CACTGGGGAAACATAACTCCATCTACACCTTGGATT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAGGCTTTCCTCAGGATaGGCTGGTGGTTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILRLSSG*AGGLDF
Trigger: AAAGTCTAAACCACCAGCCCATCCTGAGGAAAGCCT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAACTTCCCAGGGTTGTaGGTAGGGATAGAGAAATTA +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPNFPGL*VGIEKL
Trigger: TAATTTCTCTATCCCTACCCACAACCCTGGGAAGTT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTACCACAAATCGACCTaGTTTCCAAATGTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPYHKST*FPNVLK
Trigger: TTTCAGGACATTTGGAAATCAGGTCGATTTGTGGTA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACACCTTTTTGTCATCTaGTTGCACTGGTGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQHLFVI*LHWCAL
Trigger: CAAGGCACACCAGTGCAAGCAGATGACAAAAAGGTG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTTCAGGTGATAAAATaGAGAATCAGTCCAAATCCA +
Preference number: 2 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLQVIK*RISPNP
Trigger: TGGATTTGGACTGATTCTCCATTTTATCACCTGAAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGAT +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILKCISR*MAASLD
Trigger: ATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATTCATTCTATTTCCATaGGTCCAAGACTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQFILFP*VQDSGH
Trigger: GTGGCCAGAGTCTTGGACTCATGGAAATAGAATGAA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGGATTGCTTGTGAGTaGTTTTTGTTCCCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILWIACE*FLFPSK
Trigger: TTTGGAGGGGAACAAAAATCACTCACAAGCAATCCA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTTTTGTCATCTGCTTaGACTGGTGTGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILFLSSA*TGVPCE
Trigger: TTCACAAGGCACACCAGTGCAAGCAGATGACAAAAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGGGCAAATAGAAGGTaGTCAGACAAGTCCACAAAA +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILWANRR*SDKSTK
Trigger: TTTTGTGGACTTGTCTGACCACCTTCTATTTGCCCA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGAATTGAGCAAACTCTaGGCAAATAGAAGGTGGTCA +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILELSKL*ANRRWS
Trigger: TGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGTTCTGATACTAGTTTaGTTTTCCAAAGGAATCCAG +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPVLILV*FSKGIQ
Trigger: CTGGATTCCTTTGGAAAACCAAACTAGTATCAGAAC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCACCAGCTCTGTTCTTTTaGCTTAGGATTGACTTGGCA +
Preference number: 2 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSPALFF*LRIDLA
Trigger: TGCCAAGTCAATCCTAAGCCAAAAGAACAGAGCTGG...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATGGATTGCTTGTGAGTaGTTTTTGTTCCCCTCCAAA +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQWIACE*FLFPSK
Trigger: TTTGGAGGGGAACAAAAATCACTCACAAGCAATCCA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTGGGGGAAATGGGATaGAAACAAAATCATGCATCT +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILLGEMG*KQNHAS
Trigger: AGATGCATGATTTTGTTTTCATCCCATTTCCCCCAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR TCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAATGTGGCATTATTTCTaGGGGCTCTGTTTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSMWHYF*GLCFVP
Trigger: TGGAACAAAACAGAGCCCTCAGAAATAATGCCACAT...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATT +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQGVPCE*PSIHSI
Trigger: AATAGAATGAATAGAGGGGCATTCACAAGGCACACC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTATTGCCTTTTTATTATaGTGGTTATTGCATCACTGC +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPIAFLL*WLLHHC
Trigger: GCAGTGATGCAATAACCAGCATAATAAAAAGGCAAT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTG +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQNPRCR*SYVSPV
Trigger: CACTGGGGAAACATAACTCCATCTACACCTTGGATT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCCCCAAAGAAAACAGTaGAATCCAAGAATTATACTA +
Preference number: 2 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPPQRKQ*NPRIIL
Trigger: TAGTATAATTCTTGGATTCCACTGTTTTCTTTGGGG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCACAGCATCTCCACAGTaGGCTTTTAATTCAGAACTT +
Preference number: 2 (lower is better)
Translates to: DREIIANFQKAQVMANILTASPQ*AFNSEL
Trigger: AAGTTCTGAATTAAAAGCCCACTGTGGAGATGCTGT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAACAGCATCTCCACAGTaGGCTTTTAATTCAGAACTT +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQTASPQ*AFNSEL
Trigger: AAGTTCTGAATTAAAAGCCCACTGTGGAGATGCTGT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCATCAGCTTTCTACATATaGCTAGCCAGTTTTCCCATT +
Preference number: 2 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSSAFYI*LASFPI
Trigger: AATGGGAAAACTGGCTAGCCATATGTAGAAAGCTGA...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTTCAGGTGATAAAATaGAGAATCAGTCCAAATCCA +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLQVIK*RISPNP
Trigger: TGGATTTGGACTGATTCTCCATTTTATCACCTGAAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTACAAATTATGGAATaGAAAGCAGTTCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLQIME*KAVQER
Trigger: TCTCTCCTGAACTGCTTTCCATTCCATAATTTGTAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACCCCAAAGAAAACAGTaGAATCCAAGAATTATACTA +
Preference number: 2 (lower is better)
Translates to: TKSCISLWIGSTEISQSQPQRKQ*NPRIIL
Trigger: TAGTATAATTCTTGGATTCCACTGTTTTCTTTGGGG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 72 bp GTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTaGGTAGCTGTTGAGCTCTGGCCCAAGCCTTCAGGT +
Preference number: 3 (lower is better)
Translates to: VYYRPYPPHPSS*VAVELWPKPSG
Trigger: ACCTGAAGGCTTGGGCCAGAGCTCAACAGCTACTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 72 bp GAGGCTTTCCTCAGGATGGGCTGGTGGTTTAGACTTTaGAACTATCTCCAGCTGTGCCACTACGAGGCCCTC +
Preference number: 3 (lower is better)
Translates to: EAFLRMGWWFRL*NYLQLCHYEAL
Trigger: GAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGTCTAAACCACCAGCCCATCCTGAGGAAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 72 bp CACCGTGTCAGGCATCTTCCCCAATCCAGTCTGCTGTaGGGTTGTGAGGGTGACGAGGTGCAACCATTGTAT +
Preference number: 3 (lower is better)
Translates to: HRVRHLPQSSLL*GCEGDEVQPLY
Trigger: ATACAATGGTTGCACCTCGTCACCCTCACAACCTCACAGCAGACTGGATTGGGGAAGATGCCTGACACGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 72 bp CTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTaGTCCAACTTCCCAGGGTTGTGGGTAGGGATAGAG +
Preference number: 3 (lower is better)
Translates to: LSNPPSPIVCPS*SNFPGLWVGIE
Trigger: CTCTATCCCTACCCACAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp GAGCACTATGCATGGGCCACAGTCAGGCAGAAATCCTaGAAGGGTGCATTGTGCACAGGGGATATTGCTGTA +
Preference number: 3 (lower is better)
Translates to: EHYAWATVRQKS*KGALCTGDIAV
Trigger: TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGTGGCCCATGCATAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CCA 72 bp GGGCCTGGGAGAAGGTTGAGGAGCTTGGCTAAAGTTTaGCCAAGTGGAGAATCTTTGTCCATGAAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: GPGRRLRSLAKV*PSGESLSMKPQ
Trigger: CTGAGGCTTCATGGACAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAAATTGTATCTGCTTGCTaGGACTGTCTGCTCAACGGG +
Preference number: 3 (lower is better)
Translates to: LGISTLNPEELARSEVRKIVSAC*DCLLNG
Trigger: CCCGTTGAGCAGACAGTCCAAGCAAGCAGATACAAT...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 72 bp TACAAGGAAGTGCCCAGATTGGGCCTGGGAGAAGGTTaGGGAGCTTGGCTAAAGTTTGGCCAAGTGGAGAAT +
Preference number: 3 (lower is better)
Translates to: YKEVPRLGLGEG*GAWLKFGQVEN
Trigger: ATTCTCCACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGCACTTCCTTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp AATCCAGTCTGCTGTGAGGTTGTGAGGGTGACGAGGTaGAACCATTGTATCTGCTTGCTTGGACTGTCTGCT +
Preference number: 3 (lower is better)
Translates to: NPVCCEVVRVTR*NHCICLLGLSA
Trigger: AGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTCACAACCTCACAGCAGACTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 72 bp CATCGTTGCAAATGCAGTCTGGTAACTGATAGATGCTaGATCCACCCACTGCATCCACCGTGTCAGGCATCT +
Preference number: 3 (lower is better)
Translates to: HRCKCSLVTDRC*IHPLHPPCQAS
Trigger: AGATGCCTGACACGGTGGATGCAGTGGGTGGATGCAGCATCTATCAGTTACCAGACTGCATTTGCAACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCTGAAGGCAGGCCAGTaGACCAGACATCACCTGGGG +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLKAGQ*TRHHLG
Trigger: CCCCAGGTGATGTCTGGTCAACTGGCCTGCCTTCAG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTATGGCTTAGGATTGACTaGGCAATGCGGGCTCCTTTT +
Preference number: 3 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVWLRID*AMRAPF
Trigger: AAAAGGAGCCCGCATTGCCAAGTCAATCCTAAGCCA...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CCA 72 bp TGGGGATTTATAGACAGGGAACAGGGTCAGGGGCAGTaGATGGAAGATTACCAAGAGGAAATATCAGGGAGC +
Preference number: 3 (lower is better)
Translates to: WGFIDREQGQGQ*MEDYQEEISGS
Trigger: GCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCACTGCCCCTGACCCTGTTCCCTGTCTATAAATCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATGACGAGGTGCAACCATaGTATCTGCTTGCTTGGACT +
Preference number: 3 (lower is better)
Translates to: AHVLSCKLSGPSLVIWWHDEVQP*YLLAWT
Trigger: AGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTC...ATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 72 bp TGGAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATaGAAGTTGTCCATGGGGTCTTGCAGACATGCATCG +
Preference number: 3 (lower is better)
Translates to: WSVKARMSACIR*KLSMGSCRHAS
Trigger: CGATGCATGTCTGCAAGACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR TCA 72 bp GAACAGAGCCTAGCAGAGAAATATTTCAGTCTCCACTaGGCACTATGCATGGGCCACAGTCAGGCAGAAATC +
Preference number: 3 (lower is better)
Translates to: EQSLAEKYFSLH*ALCMGHSQAEI
Trigger: GATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTCTCTGCTAGGCTCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTTTCTGTTTTAAGATaGCCTTCTGCACCTTTTTGT +
Preference number: 3 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLSVLR*PSAPFC
Trigger: ACAAAAAGGTGCAGAAGGCAATCTTAAAACAGAAAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAAAATCATGCATCTCATaGTGGATTGGAAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQKSCIS*WIGSTE
Trigger: TTCTGTGCTTCCAATCCACAATGAGATGCATGATTT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCAACCATTGTATCTGCTaGCTTGGACTGTCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: ECQSKNECVHQMKVVHGVNHCIC*LGLSAQ
Trigger: TTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTT...GACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CAA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGTGCAGACATGCATCGTaGCAAATGCAGTCTGGTAAC +
Preference number: 3 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQCRHAS*QMQSGN
Trigger: GTTACCAGACTGCATTTGCAACGATGCATGTCTGCA...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAGCCATTTTCATGATATaGATTCTTCCCACCCATGAG +
Preference number: 3 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVAIFMI*ILPTHE
Trigger: CTCATGGGTGGGAAGAATCAATATCATGAAAATGGC...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR TCA 72 bp TTACAGGTGTCCCATTCATGGGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATAGAAGGTGGTCAGACA +
Preference number: 3 (lower is better)
Translates to: LQVSHSWALSWN*ANSGQIEGGQT
Trigger: TGTCTGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGGGACACCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp AACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTaGAAACCGCTGTGTGGGTTACATTACAGGTGTCCC +
Preference number: 3 (lower is better)
Translates to: NFQKAQVMANIL*KPLCGLHYRCP
Trigger: GGGACACCTGTAATGTAACCCACACAGCGGTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 72 bp CTGTTGAGCTCTGGCCCAAGCCTTCAGGTGATAAAATaGAGAATCAGTCCAAATCCAAGGTGTAGATGGAGT +
Preference number: 3 (lower is better)
Translates to: LLSSGPSLQVIK*RISPNPRCRWS
Trigger: ACTCCATCTACACCTTGGATTTGGACTGATTCTCCATTTTATCACCTGAAGGCTTGGGCCAGAGCTCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGCCTTCTGCACCTTTTaGTCATCTGCTTGCACTGGT +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPAFCTF*SSACTG
Trigger: ACCAGTGCAAGCAGATGACAAAAAGGTGCAGAAGGC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACTTTCTGTTTTAAGATaGCCTTCTGCACCTTTTTGT +
Preference number: 3 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLSVLR*PSAPFC
Trigger: ACAAAAAGGTGCAGAAGGCAATCTTAAAACAGAAAG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 72 bp AGCCATCGAAGTTGTCTGACTTGGTGGAAACAAATGTaGCTTGGCTTGGAGTGTCAAAGCAAGAATGAGTGC +
Preference number: 3 (lower is better)
Translates to: SHRSCLTWWKQM*LGLECQSKNEC
Trigger: GCACTCATTCTTGCTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR GCA 72 bp ATAGACTTCTTGCCAAAACTAGATTTTACAAGGAAGTaGCCAGATTGGGCCTGGGAGAAGGTTGAGGAGCTT +
Preference number: 3 (lower is better)
Translates to: IDFLPKLDFTRK*PDWAWEKVEEL
Trigger: AAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGCACTTCCTTGTAAAATCTAGTTTTGGCAAGAAGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp GCAGGCAAGCGTATTCTAGCTCACTGCAAATGCATCTaGAGAACAGAGCCTAGCAGAGAAATATTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: AGKRILAHCKCI*RTEPSREIFQS
Trigger: AGACTGAAATATTTCTCTGCTAGGCTCTGTTCTGCAGATGCATTTGCAGTGAGCTAGAATACGCTTGCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CCA 72 bp ATAAAATGGAGAATCAGTCCAAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTGCCACTCTCAGGCGTG +
Preference number: 3 (lower is better)
Translates to: IKWRISPNPRCR*SYVSPVPLSGV
Trigger: CACGCCTGAGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTCTCCATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 72 bp TTGCACTTTACATTCCATAGGAGGCTTTCCTCAGGATaGGCTGGTGGTTTAGACTTTGAAACTATCTCCAGC +
Preference number: 3 (lower is better)
Translates to: LHFTFHRRLSSG*AGGLDFETISS
Trigger: GCTGGAGATAGTTTCAAAGTCTAAACCACCAGCCCATCCTGAGGAAAGCCTCCTATGGAATGTAAAGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 72 bp CCATTCATGGGCACTGTCTTGGAATTGAGCAAACTCTaGGCAAATAGAAGGTGGTCAGACAAGTCCACAAAA +
Preference number: 3 (lower is better)
Translates to: PFMGTVLELSKL*ANRRWSDKSTK
Trigger: TTTTGTGGACTTGTCTGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCTCCTAGGCGATCAGTaGCGCATTTTCCCTGATTTA +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLLGDQ*RIFPDL
Trigger: TAAATCAGGGAAAATGCGCAACTGATCGCCTAGGAG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAGAAGGTTGAGGAGCTaGGCTAAAGTTTGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPRRLRS*AKVWPS
Trigger: ACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATTCCCATTTGTCAATTTaGGCTTTTGCTGCCATTGCT +
Preference number: 3 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNSHLSI*AFAAIA
Trigger: AGCAATGGCAGCAAAAGCCAAAATTGACAAATGGGA...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CCA 72 bp CTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTaGTGGCATCAGCAGGACAGAGATATAGTGAGATGC +
Preference number: 3 (lower is better)
Translates to: LSCKLSGPSLVI*WHQQDRDIVRC
Trigger: GCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGCCTTCTGCACCTTTTaGTCATCTGCTTGCACTGGT +
Preference number: 3 (lower is better)
Translates to: DREIIANFQKAQVMANILAFCTF*SSACTG
Trigger: ACCAGTGCAAGCAGATGACAAAAAGGTGCAGAAGGC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp TTTTTGTCATCTGCTTGCACTGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATTTCCATGAGTCCAAGA +
Preference number: 3 (lower is better)
Translates to: FLSSACTGVPCE*PSIHSISMSPR
Trigger: TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAGATGACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGCATCTCATTGTGGATaGGAAGCACAGAAATTTCTC +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPASHCG*EAQKFL
Trigger: GAGAAATTTCTGTGCTTCCAATCCACAATGAGATGC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTCCTAGGCGATCAGTaGCGCATTTTCCCTGATTTA +
Preference number: 3 (lower is better)
Translates to: DREIIANFQKAQVMANILLLGDQ*RIFPDL
Trigger: TAAATCAGGGAAAATGCGCAACTGATCGCCTAGGAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTCATGGGCACTGTCTaGGAATTGAGCAAACTCTGG +
Preference number: 3 (lower is better)
Translates to: DREIIANFQKAQVMANILFMGTV*ELSKLW
Trigger: CCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp GAACGAGAAATCCAAGTTAAAAGGAAGAATCTTGTATaGTTTTCAGCTTTCAACAACTCTGGAGGTAGGGGG +
Preference number: 3 (lower is better)
Translates to: EREIQVKRKNLV*FSAFNNSGGRG
Trigger: CCCCCTACCTCCAGAGTTGTTGAAAGCTGAAAAGCATACAAGATTCTTCCTTTTAACTTGGATTTCTCGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR GCA 72 bp AGATGCTTTGTAAACAAGCAGCCATGCCTTACAGCCTaGAACAAACAAGCAAACAAACAACAAAACTATGCC +
Preference number: 3 (lower is better)
Translates to: RCFVNKQPCLTA*NKQANKQQNYA
Trigger: GGCATAGTTTTGTTGTTTGTTTGCTTGTTTGTTGCAGGCTGTAAGGCATGGCTGCTTGTTTACAAAGCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CCA 72 bp AGACAAGTCCACAAAAGAGATAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGATTTTGCCATAAAGGAA +
Preference number: 3 (lower is better)
Translates to: RQVHKRDKCISR*MAASLDFAIKE
Trigger: TTCCTTTATGGCAAAATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTTATCTCTTTTGTGGACTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCAGTTCAGGAGAGATTaGCCTTGGGATTATTATTAC +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPQFRRD*PWDYYY
Trigger: GTAATAATAATCCCAAGGCAAATCTCTCCTGAACTG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAAATCATGCATCTCATaGTGGATTGGAAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPKSCIS*WIGSTE
Trigger: TTCTGTGCTTCCAATCCACAATGAGATGCATGATTT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGCATCTCATTGTGGATaGGAAGCACAGAAATTTCTC +
Preference number: 3 (lower is better)
Translates to: DREIIANFQKAQVMANILASHCG*EAQKFL
Trigger: GAGAAATTTCTGTGCTTCCAATCCACAATGAGATGC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAAAAGTCATTGGTAGCTaGATGGGGATGGCACTGAAT +
Preference number: 3 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSKVIGS*MGMALN
Trigger: ATTCAGTGCCATCCCCATCAAGCTACCAATGACTTT...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAAATCATGCATCTCATaGTGGATTGGAAGCACAGAA +
Preference number: 3 (lower is better)
Translates to: DREIIANFQKAQVMANILKSCIS*WIGSTE
Trigger: TTCTGTGCTTCCAATCCACAATGAGATGCATGATTT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAATCCAATCACATTGTaGGGGAAAGTCTTATATCTG +
Preference number: 3 (lower is better)
Translates to: DREIIANFQKAQVMANILNPITL*GKVLYL
Trigger: CAGATATAAGACTTTCCCCAACAATGTGATTGGATT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR-3UTR CAA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCATCCTTTCCCCATTTCTaGTTTTTGTCAGGTTTGTCA +
Preference number: 3 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSSFPHF*FLSGLS
Trigger: TGACAAACCTGACAAAAACAAGAAATGGGGAAAGGA...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR TCA 72 bp TATGCTTATGTGTATAGATCATGGATTGCTTGTGAGTaGTTTTTGTTCCCCTCCAAATATCAGAGACTTTCT +
Preference number: 3 (lower is better)
Translates to: YAYVYRSWIACE*FLFPSKYQRLS
Trigger: AGAAAGTCTCTGATATTTGGAGGGGAACAAAAATCACTCACAAGCAATCCATGATCTATACACATAAGCATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR TCA 72 bp ATAATAGTAATGATACTCTCAGAATTGGCAGGGTTCTaGAGGTTAGAAGGCAAACTAAATATTAGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: IIVMILSELAGF*RLEGKLNISPL
Trigger: CAAAGGGCTAATATTTAGTTTGCCTTCTAACCTTCAGAACCCTGCCAATTCTGAGAGTATCATTACTATTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGGTCTTGTGTGGGCGTaGGGACGGTCGGCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEGLVWA*GRSARG
Trigger: ACCCCGCGCCGACCGTCCCCACGCCCACACAAGACC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAAGGGCGGTCTTGTGTaGGCGTGGGGACGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQKGGLV*AWGRSA
Trigger: CGCCGACCGTCCCCACGCCCACACAAGACCGCCCTT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS-3UTR TCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGCAGTGTTCCGCTGTATaGACTGGGCCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTQCSAV*TGPPPP
Trigger: CGGTGGAGGCGGCCCAGTTCATACAGCGGAACACTG...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp GTAACTGATAGATGCTGCATCCACCCACTGCATCCACCGTGTCAGGCATCTTCCGCGGTTTTGCAGCCCTaGGGGCATCTGGCAATGGCG +
Preference number: 4 (lower is better)
Translates to: VTDRCCIHPLHPPCQASSAVLQP*GHLAMA
Trigger: CGCCATTGCCAGATGCCCTCAGGGCTGCAAAACCGC...GGAAGATGCCTGACACGGTGGATGCAGTGGGTGGATGCAGCATCTATCAGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGTCCCGTCAGCTGCTaGAGGCTTGGCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGPVSC*RLGQQH
Trigger: GTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGTCCGTCAAGTGGCCTaGCTGCCTAGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQVRQVA*LPRVTS
Trigger: GCTGGTCACCCTAGGCAGCCAGGCCACTTGACGGAC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR TCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAACGAAAGAGTGGGGCATaGGGACGGGGTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKRKSGA*GRGAWQ
Trigger: CTGCCATGCACCCCGTCCTCATGCCCCACTCTTTCG...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTGACCCCGACGATCTaGAGGGGGAGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVTPTI*RGRKTS
Trigger: GCTGGTCTTCCTCCCCCTGCAGATCGTCGGGGTCAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCCACATGCGTCTGTCTaGTCCCCAGGCGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEPHASV*SPGAAS
Trigger: GCTAGCAGCGCCTGGGGACCAGACAGACGCATGTGG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCACATGCGTCTGTCTaGTCCCCAGGCGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPHASV*SPGAAS
Trigger: GCTAGCAGCGCCTGGGGACCAGACAGACGCATGTGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTCACCTGGGGGATGGTaGAGGCTGAGGAGCCTGATC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQSPGGW*RLRSLI
Trigger: GATCAGGCTCCTCAGCCTCCACCATCCCCCAGGTGA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGACATCACCTGGGGGATaGTGGAGGCTGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQTSPGG*WRLRSL
Trigger: CAGGCTCCTCAGCCTCCACCATCCCCCAGGTGATGT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCTCACCCCTCCAGTTaGGTAGCTGTTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPHPSS*VAVELW
Trigger: CCAGAGCTCAACAGCTACTCAACTGGAGGGGTGAGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGCATCGGGCTCTTCCTaGCTGCTCCAAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEASGSS*LLQGCC
Trigger: GCAGCAACCTTGGAGCAGGCAGGAAGAGCCCGATGC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR CCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGTTCCGCTGTATGAACTaGGCCGCCTCCACCGTTAGC +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTFRCMN*AASTVS
Trigger: GCTAACGGTGGAGGCGGCCCAGTTCATACAGCGGAA...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCAGCCTGTATCACCCTaGGCCAACGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQQPVSP*ANEGCL
Trigger: CAGGCATCCTTCGTTGGCCCAGGGTGATACAGGCTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAACCTCTGGCAGGGTCTaGGTGTGTCTGTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQTSGRV*VCLSAA
Trigger: AGCTGCGGACAGACACACCCAGACCCTGCCAGAGGT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGACCTCTGGCAGGGTCTaGGTGTGTCTGTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVETSGRV*VCLSAA
Trigger: AGCTGCGGACAGACACACCCAGACCCTGCCAGAGGT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGCAAGACAGGCCGGTaGAAGGACAGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGKTGR*KDSTAE
Trigger: TTCAGCTGTGCTGTCCTTCCACCGGCCTGTCTTGCC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACATGTCGGCTCCCTATaGCCACGCACTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQHVGSL*PRTLQQ
Trigger: CTGCTGGAGAGTGCGTGGCCATAGGGAGCCGACATG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGTTGCGCATTTTCCCTaGTTTACAGGGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQVAHFP*FTGAWG
Trigger: CCCCCAAGCCCCTGTAAATCAGGGAAAATGCGCAAC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTGTGACCCCGACGATCTaGAGGGGGAGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: WHQQDRDIVRCREPSKLSVTPTI*RGRKTS
Trigger: GCTGGTCTTCCTCCCCCTGCAGATCGTCGGGGTCAC...AGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTGGGCCAACGAAGGATaGCTGGAACCCGGATACCTC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEWANEG*LEPGYL
Trigger: GAGGTATCCGGGTTCCAGGCATCCTTCGTTGGCCCA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCTTCCAGATGGATGTaGTGTTCTGAGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPSRWM*CSEGAS
Trigger: GCTGGCACCCTCAGAACAGCACATCCATCTGGAAGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGGCAACTGGGGAAATaGTGTCAAATCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGQLGK*CQILPA
Trigger: GGCTGGGAGGATTTGACAGCATTTCCCCAGTTGCCC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAATCTACCTGGCGGTTTTaGAGCCCTGAGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKSTWRF*SPEGIW
Trigger: CCAGATGCCCTCAGGGCTGCAAAACCGCCAGGTAGA...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATCTACCTGGCGGTTTTaGAGCCCTGAGGGCATCTGG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQSTWRF*SPEGIW
Trigger: CCAGATGCCCTCAGGGCTGCAAAACCGCCAGGTAGA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTGCCTGCTCCAAGGTTaGTGCTGTGGGCGCACTTTG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVECLLQG*CCGRTL
Trigger: CAAAGTGCGCCCACAGCAGCAACCTTGGAGCAGGCA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCAACCTCACTACAGCTaGGTCCCGTCAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEQPHYS*VPSAAG
Trigger: TCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTTCCGCTGTATGAACTaGGCCGCCTCCACCGTTAGC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEFRCMN*AASTVS
Trigger: GCTAACGGTGGAGGCGGCCCAGTTCATACAGCGGAA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATTCCGCTGTATGAACTaGGCCGCCTCCACCGTTAGC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQFRCMN*AASTVS
Trigger: GCTAACGGTGGAGGCGGCCCAGTTCATACAGCGGAA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCAACGAAGGATGCCTaGAACCCGGATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPTKDA*NPDTSF
Trigger: GAAGGAGGTATCCGGGTTCCAGGCATCCTTCGTTGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAACAGCCTGTATCACCCTaGGCCAACGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKQPVSP*ANEGCL
Trigger: CAGGCATCCTTCGTTGGCCCAGGGTGATACAGGCTG...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACAGCCTGTATCACCCTaGGCCAACGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQQPVSP*ANEGCL
Trigger: CAGGCATCCTTCGTTGGCCCAGGGTGATACAGGCTG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAGGAAGTGCCCAGATTaGGCCTGGGAGAAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQRKCPD*AWEKVE
Trigger: CTCAACCTTCTCCCAGGCCCAATCTGGGCACTTCCT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATGTCCGTCAAGTGGCCTaGCTGCCTAGGGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: AHVLSCKLSGPSLVIWWHVRQVA*LPRVTS
Trigger: GCTGGTCACCCTAGGCAGCCAGGCCACTTGACGGAC...ATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR CAA 72 bp GCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTaGCTCCAACTTCCCAGGGTTGTGGGTAGGGATAGA +
Preference number: 4 (lower is better)
Translates to: AVKSSQPNSMPL*LQLPRVVGRDR
Trigger: TCTATCCCTACCCACAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATCAGTGTTCCGCTGTATaGACTGGGCCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNQCSAV*TGPPPP
Trigger: CGGTGGAGGCGGCCCAGTTCATACAGCGGAACACTG...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCAGTGTTCCGCTGTATaGACTGGGCCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSQCSAV*TGPPPP
Trigger: CGGTGGAGGCGGCCCAGTTCATACAGCGGAACACTG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGATCACGTCCATCAATaGTCCTGTCCTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQDHVHQ*SCPQAR
Trigger: CCTTGCCTGAGGACAGGATCATTGATGGACGTGATC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGTGGGTCGTGATGGGTaGCATAACTCCCGAAACAGA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQVGRDG*HNSRNR
Trigger: TCTGTTTCGGGAGTTATGTCACCCATCACGACCCAC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGAAGGACAGCACAGCTaGAGCCAGGGCTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEEGQHS*SQGFQR
Trigger: TCTTTGGAAGCCCTGGCTTCAGCTGTGCTGTCCTTC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGAAGGACAGCACAGCTaGAGCCAGGGCTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQEGQHS*SQGFQR
Trigger: TCTTTGGAAGCCCTGGCTTCAGCTGTGCTGTCCTTC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCAGTTGAGTAGCTGTTaGGCTCTGGCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEQLSSC*ALAQAF
Trigger: GAAGGCTTGGGCCAGAGCTCAACAGCTACTCAACTG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTTGCGCATTTTCCCTaGTTTACAGGGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVAHFP*FTGAWG
Trigger: CCCCCAAGCCCCTGTAAATCAGGGAAAATGCGCAAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGCGGTTTTGCAGCCCTaGGGGCATCTGGCAATGGCG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSAVLQP*GHLAMA
Trigger: CGCCATTGCCAGATGCCCTCAGGGCTGCAAAACCGC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR GCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAATGCCCTCTCCGGGCTTaGAGTCTCTCAGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKCPLRA*SLSDWS
Trigger: TGACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCA...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGCCCTCTCCGGGCTTaGAGTCTCTCAGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQCPLRA*SLSDWS
Trigger: TGACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GGAGGTAGGGAGCTCAGGGATGGCAGCTCAGATCCGGAACAATTACAATTCAATTGGGCCAACGAAGGATaGCTGGAACCCGGATACCTC +
Preference number: 4 (lower is better)
Translates to: GGRELRDGSSDPEQLQFNWANEG*LEPGYL
Trigger: GAGGTATCCGGGTTCCAGGCATCCTTCGTTGGCCCA...ATTGAATTGTAATTGTTCCGGATCTGAGCTGCCATCCCTGAGCTCCCTACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTGCTTGCACTGGTGTaGCTTGTGAATGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLLALV*LVNAPL
Trigger: TAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAACTATCTCCAGCTGTaGCACTACGAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVENYLQL*HYEALS
Trigger: GGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCCAGCCCAATAGTATaGCCCTCTTGCTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPSPIV*PSCSNF
Trigger: GAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGGGCAACTGGGGAAATaGTGTCAAATCCTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQGQLGK*CQILPA
Trigger: GGCTGGGAGGATTTGACAGCATTTCCCCAGTTGCCC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGTCTTGCAGACATGCATCGTTGCAAATGCAGTCTGGTAACTGATAGATGCCGGGCTCTTCCTGCCTaGTCCAAGGTTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WGLADMHRCKCSLVTDRCRALPA*SKVAAV
Trigger: CACAGCAGCAACCTTGGAGCAGGCAGGAAGAGCCCG...GCATCTATCAGTTACCAGACTGCATTTGCAACGATGCATGTCTGCAAGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTGCATCGGGCTCTTCCTaGCTGCTCCAAGGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: WHQQDRDIVRCREPSKLSASGSS*LLQGCC
Trigger: GCAGCAACCTTGGAGCAGGCAGGAAGAGCCCGATGC...AGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAACTTGCTTGGACTGTCTaGTCAACGGGACCCACTAGG +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKLAWTV*STGPTR
Trigger: CCTAGTGGGTCCCGTTGAGCAGACAGTCCAAGCAAG...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTATTCCGCTGTATGAACTaGGCCGCCTCCACCGTTAGC +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVFRCMN*AASTVS
Trigger: GCTAACGGTGGAGGCGGCCCAGTTCATACAGCGGAA...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAACCAACGAAGGATGCCTaGAACCCGGATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKPTKDA*NPDTSF
Trigger: GAAGGAGGTATCCGGGTTCCAGGCATCCTTCGTTGG...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTGCCCAGATTGGGCCTaGGAGAAGGTTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVECPDWA*EKVEEL
Trigger: AAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGCA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAAGGAAGTGCCCAGATTaGGCCTGGGAGAAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQRKCPD*AWEKVE
Trigger: CTCAACCTTCTCCCAGGCCCAATCTGGGCACTTCCT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTGTCAGGAGACATTTTaGCTGTCACAGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQCQETF*LSQLAR
Trigger: CCTCGCCAGCTGTGACAGCCAAAATGTCTCCTGACA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTGTTGTTGGGGAACTaGGCTGTGATGGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLLLGN*AVMEEI
Trigger: AATCTCCTCCATCACAGCTCAGTTCCCCAACAACAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGATCACGTCCATCAATaGTCCTGTCCTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQDHVHQ*SCPQAR
Trigger: CCTTGCCTGAGGACAGGATCATTGATGGACGTGATC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTGGGTCGTGATGGGTaGCATAACTCCCGAAACAGA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVGRDG*HNSRNR
Trigger: TCTGTTTCGGGAGTTATGTCACCCATCACGACCCAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTTGTTCCATGAAAACTaGTCGGGCACCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELFHEN*SGTSGR
Trigger: CCTGCCAGAGGTGCCCGATCAGTTTTCATGGAACAA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCAGCTCATCCCAAGGTaGCATTTCCCTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQQLIPR*HFPISA
Trigger: AGCACTGATAGGGAAATGGCACCTTGGGATGAGCTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTGCCAGCAAAGTCTTTaGTGGAGAACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQCQQSL*WRTGLC
Trigger: ACACAGCCCTGTTCTCCAGCAAAGACTTTGCTGGCA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGTTATGTTTCCCCAGTaGCACTCTCAGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQVMFPQ*HSQACL
Trigger: CAAACACGCCTGAGAGTGGCACTGGGGAAACATAAC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACTGCTTGCACTGGTGTaGCTTGTGAATGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLLALV*LVNAPL
Trigger: TAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCTGCTTGCACTGGTGTaGCTTGTGAATGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELLALV*LVNAPL
Trigger: TAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGATAGTATGCCCCTCTTaGTCCAACTTCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQIVCPS*SNFPGL
Trigger: CAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTAT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCTGCCTGCTCCAAGGTTaGTGCTGTGGGCGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGCLLQG*CCGRTL
Trigger: CAAAGTGCGCCCACAGCAGCAACCTTGGAGCAGGCA...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp ACAATTCAATACTTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGCTGCATCCACCCACTaGATCCACCGTGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: TIQYLGISTLNPEELARSAASTH*IHRVRH
Trigger: ATGCCTGACACGGTGGATGCAGTGGGTGGATGCAGC...ACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAAGTATTGAATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGCGGGGCGGTGTTCATaGAGGGACGCTCGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILAGRCS*RDARAP
Trigger: GGGAGCCCGAGCGTCCCTGCATGAACACCGCCCCGC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS-3UTR CCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTACCAACGAAGGATGCCTaGAACCCGGATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVPTKDA*NPDTSF
Trigger: GAAGGAGGTATCCGGGTTCCAGGCATCCTTCGTTGG...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGGCTCATCAATCTTCTaGCCAGCCTGTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQGSSIF*PACITL
Trigger: CAGGGTGATACAGGCTGGCCAGAAGATTGATGAGCC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTCACCTGGGGGATGGTaGAGGCTGAGGAGCCTGATC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSSPGGW*RLRSLI
Trigger: GATCAGGCTCCTCAGCCTCCACCATCCCCCAGGTGA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GTAACTGATAGATGCTGCATCCACCCACTGCATCCACCGTGTCAGGCATCTTCCCCATCTCTGGTCATTTaGTGGCATCAGCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: VTDRCCIHPLHPPCQASSPSLVI*WHQQDR
Trigger: TCTGTCCTGCTGATGCCACCAAATGACCAGAGATGG...GGAAGATGCCTGACACGGTGGATGCAGTGGGTGGATGCAGCATCTATCAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp AGGCTTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTCCTTTCCGAAAGAGTaGGGCATGAGGACGGGGTGC +
Preference number: 4 (lower is better)
Translates to: RLAHVLSCKLSGPSLVIWSFPKE*GMRTGC
Trigger: GCACCCCGTCCTCATGCCCCACTCTTTCGGAAAGGA...CCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGAGAAACCTCTGCTTTaGAGCAGGCCAATCCTACTC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEEKPLL*SRPILL
Trigger: GAGTAGGATTGGCCTGCTTCAAAGCAGAGGTTTCTC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTGGGGAACTGAGCTGTaGTGGAGGAGATTGCAACTT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEWGTEL*WRRLQL
Trigger: AAGTTGCAATCTCCTCCATCACAGCTCAGTTCCCCA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCTGTTGTTGGGGAACTaGGCTGTGATGGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELLLGN*AVMEEI
Trigger: AATCTCCTCCATCACAGCTCAGTTCCCCAACAACAG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCAGTGTTCCGCTGTATaGACTGGGCCGCCTCCACCG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPQCSAV*TGPPPP
Trigger: CGGTGGAGGCGGCCCAGTTCATACAGCGGAACACTG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACACTGGTGTGCCTTGTaGATGCCCCTCTATTCATTC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQHWCAL*MPLYSF
Trigger: GAATGAATAGAGGGGCATTCACAAGGCACACCAGTG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTATTTGCTGAGGGGTaGGTTAAGGTACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVFAEG*VKVPPA
Trigger: TGCAGGAGGTACCTTAACTCACCCCTCAGCAAATAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCTGGGTCCCGTCAGCTaGTGGAGGCTTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLGPVS*WRLGQQ
Trigger: CTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCAGCTCATCCCAAGGTaGCATTTCCCTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEQLIPR*HFPISA
Trigger: AGCACTGATAGGGAAATGGCACCTTGGGATGAGCTG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACAGCTCATCCCAAGGTaGCATTTCCCTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQQLIPR*HFPISA
Trigger: AGCACTGATAGGGAAATGGCACCTTGGGATGAGCTG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGTGACCCCGACGATCTaGAGGGGGAGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPVTPTI*RGRKTS
Trigger: GCTGGTCTTCCTCCCCCTGCAGATCGTCGGGGTCAC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGCCAGCAAAGTCTTTaGTGGAGAACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQCQQSL*WRTGLC
Trigger: ACACAGCCCTGTTCTCCAGCAAAGACTTTGCTGGCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCACTTCTTCTACATGTaGTCCCTGGTCCGATGTGAA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQHFFYM*SLVRCE
Trigger: TTCACATCGGACCAGGGAGCACATGTAGAAGAAGTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATTGGGCCAACGAAGGATaGCTGGAACCCGGATACCTC +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNWANEG*LEPGYL
Trigger: GAGGTATCCGGGTTCCAGGCATCCTTCGTTGGCCCA...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGAAGATGGTGAGCTTTaGCACATGCGTCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEEDGEL*HMRLSG
Trigger: ACCAGACAGACGCATGTGGCAAAGCTCACCATCTTC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTTATGTTTCCCCAGTaGCACTCTCAGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVMFPQ*HSQACL
Trigger: CAAACACGCCTGAGAGTGGCACTGGGGAAACATAAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAATAGTATGCCCCTCTTaGTCCAACTTCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQIVCPS*SNFPGL
Trigger: CAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTAT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGATTTTACAAGGAAGTaGCCAGATTGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQDFTRK*PDWAWE
Trigger: CTCCCAGGCCCAATCTGGGCACTTCCTTGTAAAATC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTCGGAAAACCAAGAATaGTCAGGGCCTCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQSENQE*SGPQKA
Trigger: AGCTTTCTGAGGCCCTGAGCATTCTTGGTTTTCCGA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp AGGCTTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGCTGCTCCAAGGTTGCTaGTGTGGGCGCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: RLAHVLSCKLSGPSLVIWLLQGC*CGRTLM
Trigger: CATCAAAGTGCGCCCACAGCAGCAACCTTGGAGCAG...CCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTTCCGCTGTATGAACTaGGCCGCCTCCACCGTTAGC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSFRCMN*AASTVS
Trigger: GCTAACGGTGGAGGCGGCCCAGTTCATACAGCGGAA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCAGCCTGTATCACCCTaGGCCAACGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSQPVSP*ANEGCL
Trigger: CAGGCATCCTTCGTTGGCCCAGGGTGATACAGGCTG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATCAGCCTGTATCACCCTaGGCCAACGAAGGATGCCTG +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNQPVSP*ANEGCL
Trigger: CAGGCATCCTTCGTTGGCCCAGGGTGATACAGGCTG...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAAGAAGCACACGTGTGTaGCAAAGCATCCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQRSTRV*QSIRWN
Trigger: GTTCCAACGGATGCTTTGCCACACACGTGTGCTTCT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAGAAGCACACGTGTGTaGCAAAGCATCCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVERSTRV*QSIRWN
Trigger: GTTCCAACGGATGCTTTGCCACACACGTGTGCTTCT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTTTTCTCTATCACACTaGCAAGACAGGCCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQFSLSH*QDRPVE
Trigger: TTCCACCGGCCTGTCTTGCCAGTGTGATAGAGAAAA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCCACATGCGTCTGTCTaGTCCCCAGGCGCTGCTAGC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPPHASV*SPGAAS
Trigger: GCTAGCAGCGCCTGGGGACCAGACAGACGCATGTGG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATCACCTGGGGGATGGTaGAGGCTGAGGAGCCTGATC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRSPGGW*RLRSLI
Trigger: GATCAGGCTCCTCAGCCTCCACCATCCCCCAGGTGA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAACATCACCTGGGGGATaGTGGAGGCTGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRTSPGG*WRLRSL
Trigger: CAGGCTCCTCAGCCTCCACCATCCCCCAGGTGATGT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAGGTCTTGTGTGGGCGTaGGGACGGTCGGCGCGGGGT +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSGLVWA*GRSARG
Trigger: ACCCCGCGCCGACCGTCCCCACGCCCACACAAGACC...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGCGGGGACATCACCTGTaGGCTACTTGTAAATGTAGA +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTRGHHL*ATCKCR
Trigger: TCTACATTTACAAGTAGCCCACAGGTGATGTCCCCG...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATGGGGCCGGAGCACGTaGGAGCAGTCCCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQWGRST*EQSLGS
Trigger: GGACCCCAGGGACTGCTCCCACGTGCTCCGGCCCCA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS-3UTR TCA 90 bp GTAACTGATAGATGCTGCATCCACCCACTGCATCCACCGTGTCAGGCATCTTCCCCATTACTTCCGCCATaGATTTCTCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: VTDRCCIHPLHPPCQASSPLLPP*ISPLED
Trigger: GTCTTCCAAAGGAGAAATTCATGGCGGAAGTAATGG...GGAAGATGCCTGACACGGTGGATGCAGTGGGTGGATGCAGCATCTATCAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCATTACTTCCGCCATaGATTTCTCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPLLPP*ISPLED
Trigger: GTCTTCCAAAGGAGAAATTCATGGCGGAAGTAATGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCGATCACGTCCATCAATaGTCCTGTCCTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ECQSKNECVHQMKVVHGVDHVHQ*SCPQAR
Trigger: CCTTGCCTGAGGACAGGATCATTGATGGACGTGATC...GACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGTGGAAGAGAAACTCATaGTCGGAGCGTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTWKRNS*SERWLF
Trigger: AAAAAGCCAACGCTCCGATCATGAGTTTCTCTTCCA...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTGGAAGAGAAACTCATaGTCGGAGCGTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQWKRNS*SERWLF
Trigger: AAAAAGCCAACGCTCCGATCATGAGTTTCTCTTCCA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTTCATTCTATTTCCATaGGTCCAAGACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQFILFP*VQDSGH
Trigger: GTGGCCAGAGTCTTGGACTCATGGAAATAGAATGAA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGTTGCGCATTTTCCCTaGTTTACAGGGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSVAHFP*FTGAWG
Trigger: CCCCCAAGCCCCTGTAAATCAGGGAAAATGCGCAAC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTGGTGGTTTAGACTTTaGAACTATCTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQWWFRL*NYLQLC
Trigger: GCACAGCTGGAGATAGTTTCAAAGTCTAAACCACCA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQALSWN*ANSGQI
Trigger: TATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGACTGGACTCAGCTCTaGATACACCATGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQDWTQL*IHHGKL
Trigger: CAGTTTTCCATGGTGTATTCAGAGCTGAGTCCAGTC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCAACACTGGCTTGAGTaGTATCTTGCAACACAGAAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQQHWLE*YLATQN
Trigger: GTTCTGTGTTGCAAGATATCACTCAAGCCAGTGTTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGCAATCCAGTCTGCTGTaGGGTTGTGAGGGTGACGAG +
Preference number: 4 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRQSSLL*GCEGDE
Trigger: CTCGTCACCCTCACAACCTCACAGCAGACTGGATTG...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGTGGTGGAAACAAATGTaGCTTGGCTTGGAGTGTCAA +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTWWKQM*LGLECQ
Trigger: TTGACACTCCAAGCCAAGTCACATTTGTTTCCACCA...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGATCCTACTCAATCACTaGAACCTCACTACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEILLNH*NLTTAG
Trigger: CCCAGCTGTAGTGAGGTTGCAGTGATTGAGTAGGAT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTATGCCAGCAAAGTCTTTaGTGGAGAACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVCQQSL*WRTGLC
Trigger: ACACAGCCCTGTTCTCCAGCAAAGACTTTGCTGGCA...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCTCCGTGTTGACTTTTaGCAGCAAAGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELRVDF*QQSLCW
Trigger: CCAGCAAAGACTTTGCTGGCAAAAGTCAACACGGAG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACACTTCTTCTACATGTaGTCCCTGGTCCGATGTGAA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQHFFYM*SLVRCE
Trigger: TTCACATCGGACCAGGGAGCACATGTAGAAGAAGTG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCCTTCCAGATGGATGTaGTGTTCTGAGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSPSRWM*CSEGAS
Trigger: GCTGGCACCCTCAGAACAGCACATCCATCTGGAAGG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACTGTCCGCAGCTTCCTaGATGACTTTGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLSAAS*MTLRIS
Trigger: TGAAATCCTCAAAGTCATGCAGGAAGCTGCGGACAG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCACCTTTTTGTCATCTaGTTGCACTGGTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEHLFVI*LHWCAL
Trigger: CAAGGCACACCAGTGCAAGCAGATGACAAAAAGGTG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGACCCTGCACAGTCATaGTGTCCCAATAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEDPAQS*CPNRFH
Trigger: ATGAAACCTATTGGGACAGCATGACTGTGCAGGGTC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATCGGAAAACCAAGAATaGTCAGGGCCTCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQSENQE*SGPQKA
Trigger: AGCTTTCTGAGGCCCTGAGCATTCTTGGTTTTCCGA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTTGATGGTAGCATCCTaGATGGTAGCGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELMVAS*MVAVLY
Trigger: GTAGAGAACCGCTACCATGCAGGATGCTACCATCAA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR GCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAGTCAGGCAGAAATCCTaGAAGGGTGCATTGTGCACA +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVVRQKS*KGALCT
Trigger: TGTGCACAATGCACCCTTGCAGGATTTCTGCCTGAC...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGACCATTGTATCTGCTTaGTTGGACTGTCTGCTCAAC +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTTIVSA*LDCLLN
Trigger: GTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGT...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAAGTAACTGATAGATGCTaGATCCACCCACTGCATCCA +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKVTDRC*IHPLHP
Trigger: TGGATGCAGTGGGTGGATGCAGCATCTATCAGTTAC...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATTCATCCTCTGTTCATaGTTTCTGCACCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQFILCS*FLHQWE
Trigger: CTCCCACTGGTGCAGAAACCATGAACAGAGGATGAA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCCAACGAAGGATGCCTaGAACCCGGATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSPTKDA*NPDTSF
Trigger: GAAGGAGGTATCCGGGTTCCAGGCATCCTTCGTTGG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAATTCAATACTTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGGCTCATCAATCTTCTaGCCAGCCTGTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: TIQYLGISTLNPEELARSGSSIF*PACITL
Trigger: CAGGGTGATACAGGCTGGCCAGAAGATTGATGAGCC...ACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAAGTATTGAATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTTTTCTCTATCACACTaGCAAGACAGGCCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEFSLSH*QDRPVE
Trigger: TTCCACCGGCCTGTCTTGCCAGTGTGATAGAGAAAA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAGGCTTTCCTCAGGATaGGCTGGTGGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVERLSSG*AGGLDF
Trigger: AAAGTCTAAACCACCAGCCCATCCTGAGGAAAGCCT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQKCISR*MAASLD
Trigger: ATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTACATCACCTGGGGGATaGTGGAGGCTGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPTSPGG*WRLRSL
Trigger: CAGGCTCCTCAGCCTCCACCATCCCCCAGGTGATGT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTCAGGGGCAGTGGATaGAAGATTACCAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVRGSG*KITKRK
Trigger: TTTCCTCTTGGTAATCTTCCATCCACTGCCCCTGAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTGTCAGGAGACATTTTaGCTGTCACAGCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: IWWHQQDRDIVRCREPSKCQETF*LSQLAR
Trigger: CCTCGCCAGCTGTGACAGCCAAAATGTCTCCTGACA...CTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAAAGGGCGGTCTTGTGTaGGCGTGGGGACGGTCGGCG +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSKGGLV*AWGRSA
Trigger: CGCCGACCGTCCCCACGCCCACACAAGACCGCCCTT...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGGATGAAAGTTGTCCATaGGGTCTTGCAGACATGCAT +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTDESCP*GLADMH
Trigger: ATGCATGTCTGCAAGACCCCATGGACAACTTTCATC...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCCTATCAGTGCTGTTaGATAACCTTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPYQCC*ITLILQ
Trigger: CTGAAGGATCAAGGTTATTCAACAGCACTGATAGGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAACCCTATCAGTGCTGTTaGATAACCTTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKPYQCC*ITLILQ
Trigger: CTGAAGGATCAAGGTTATTCAACAGCACTGATAGGG...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCATTACTTCCGCCATaGATTTCTCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPLLPP*ISPLED
Trigger: GTCTTCCAAAGGAGAAATTCATGGCGGAAGTAATGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATGATCACGTCCATCAATaGTCCTGTCCTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNDHVHQ*SCPQAR
Trigger: CCTTGCCTGAGGACAGGATCATTGATGGACGTGATC...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGATCACGTCCATCAATaGTCCTGTCCTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSDHVHQ*SCPQAR
Trigger: CCTTGCCTGAGGACAGGATCATTGATGGACGTGATC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGGAAGAGAAACTCATaGTCGGAGCGTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQWKRNS*SERWLF
Trigger: AAAAAGCCAACGCTCCGATCATGAGTTTCTCTTCCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTTGTTCCATGAAAACTaGTCGGGCACCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLFHEN*SGTSGR
Trigger: CCTGCCAGAGGTGCCCGATCAGTTTTCATGGAACAA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAAGAAAGTTGTTCCATaGAAACTGATCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEKKVVP*KLIGHL
Trigger: GAGGTGCCCGATCAGTTTTCATGGAACAACTTTCTT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACAGTTGAGTAGCTGTTaGGCTCTGGCCCAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRQLSSC*ALAQAF
Trigger: GAAGGCTTGGGCCAGAGCTCAACAGCTACTCAACTG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATTCATTCTATTTCCATaGGTCCAAGACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQFILFP*VQDSGH
Trigger: GTGGCCAGAGTCTTGGACTCATGGAAATAGAATGAA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTTGCGCATTTTCCCTaGTTTACAGGGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVAHFP*FTGAWG
Trigger: CCCCCAAGCCCCTGTAAATCAGGGAAAATGCGCAAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCAACACTGGCTTGAGTaGTATCTTGCAACACAGAAC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEQHWLE*YLATQN
Trigger: GTTCTGTGTTGCAAGATATCACTCAAGCCAGTGTTG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGTCTTCATCTTCGCTATaGACAGCTGAAGACGATCTT +
Preference number: 4 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTSSSSL*TAEDDL
Trigger: AAGATCGTCTTCAGCTGTTCATAGCGAAGATGAAGA...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCAGTGCGTGCATCAGATaGAAGTTGTCCATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGSACIR*KLSMGS
Trigger: AGACCCCATGGACAACTTTCATCTGATGCACGCACT...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCGGAGCTAGCCAGGAGTaGAGTGAGGAAAGAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGGASQE*SEERAN
Trigger: ATTTGCTCTTTCCTCACTTCACTCCTGGCTAGCTCC...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTGGGTCCCGTCAGCTaGTGGAGGCTTGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILLGPVS*WRLGQQ
Trigger: CTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTGTGATGGAGGAGATTaGAACTTCACTTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQCDGGD*NFTCSS
Trigger: GGATGAACAAGTGAAGTTGCAATCTCCTCCATCACA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATTGCCAGCAAAGTCTTTaGTGGAGAACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AHVLSCKLSGPSLVIWWHCQQSL*WRTGLC
Trigger: ACACAGCCCTGTTCTCCAGCAAAGACTTTGCTGGCA...ATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GGAGGTAGGGAGCTCAGGGATGGCAGCTCAGATCCGGAACAATTACAATTCAATCTCCGTGTTGACTTTTaGCAGCAAAGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GGRELRDGSSDPEQLQFNLRVDF*QQSLCW
Trigger: CCAGCAAAGACTTTGCTGGCAAAAGTCAACACGGAG...ATTGAATTGTAATTGTTCCGGATCTGAGCTGCCATCCCTGAGCTCCCTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTGGGCCAACGAAGGATaGCTGGAACCCGGATACCTC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPWANEG*LEPGYL
Trigger: GAGGTATCCGGGTTCCAGGCATCCTTCGTTGGCCCA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACCTTCCAGATGGATGTaGTGTTCTGAGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRPSRWM*CSEGAS
Trigger: GCTGGCACCCTCAGAACAGCACATCCATCTGGAAGG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATT +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGVPCE*PSIHSI
Trigger: AATAGAATGAATAGAGGGGCATTCACAAGGCACACC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCCCAGCCCAATAGTATaGCCCTCTTGCTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSPSPIV*PSCSNF
Trigger: GAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCATGCCTTACAGCCTaGAACAAACAAGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPCLTA*NKQANK
Trigger: TTTGTTTGCTTGTTTGTTGCAGGCTGTAAGGCATGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTAAACAAGCAGCCATaGCTTACAGCCTGCAACAAA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVNKQP*LTACNK
Trigger: TTTGTTGCAGGCTGTAAGGCATGGCTGCTTGTTTAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCTAGTCCCAATACCATaGCCTTCTCACTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELVPIP*PSHSNF
Trigger: GAAATTGGAGTGAGAAGGGCATGGTATTGGGACTAG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTATCCTTCCCAGTTGTTTaGTTTTCCTCCCACACTCCA +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVSFPVV*FSSHTP
Trigger: TGGAGTGTGGGAGGAAAAGCAAACAACTGGGAAGGA...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTATGCAAGGGTGCATTGTaGACAGGGGATATTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVCKGAL*TGDIAV
Trigger: TACAGCAATATCCCCTGTGCACAATGCACCCTTGCA...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAGAAATCCTGCAAGGGTaGATTGTGCACAGGGGATAT +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVEILQG*IVHRGY
Trigger: ATATCCCCTGTGCACAATGCACCCTTGCAGGATTTC...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATGTGAGGGTGACGAGGTaGAACCATTGTATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: AHVLSCKLSGPSLVIWWHVRVTR*NHCICL
Trigger: CAAGCAGATACAATGGTTGCACCTCGTCACCCTCAC...ATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp ACAATTCAATACTTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGGGGTCTTGCAGACATaGATCGTTGCAAATGCAGTC +
Preference number: 4 (lower is better)
Translates to: TIQYLGISTLNPEELARSGVLQT*IVANAV
Trigger: GACTGCATTTGCAACGATGCATGTCTGCAAGACCCC...ACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAAGTATTGAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTTCCGCTGTATGAACTaGGCCGCCTCCACCGTTAGC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPFRCMN*AASTVS
Trigger: GCTAACGGTGGAGGCGGCCCAGTTCATACAGCGGAA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGGCAAGACAGGCCGGTaGAAGGACAGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPGKTGR*KDSTAE
Trigger: TTCAGCTGTGCTGTCCTTCCACCGGCCTGTCTTGCC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQKCISR*MAASLD
Trigger: ATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEKCISR*MAASLD
Trigger: ATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGAATTGAGCAAACTCTaGGCAAATAGAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQELSKL*ANRRWS
Trigger: TGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAGAAAGCCCAAGTCATaGCTAACATTCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQRKPKS*LTFSAN
Trigger: GTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAACTTAAAGGGCAACTaGGGAAATGCTGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQNLKGN*GNAVKS
Trigger: GGATTTGACAGCATTTCCCCAGTTGCCCTTTAAGTT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATGCCCAGATTGGGCCTaGGAGAAGGTTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRCPDWA*EKVEEL
Trigger: AAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGCA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 72 bp AGGAGCTTGGCTAAAGTTTGGCCAAGTGGAGAATCTTaGTCCATGAAGCCTCAGATGGATGTGAGGTCCGTA +
Preference number: 4 (lower is better)
Translates to: RSLAKVWPSGES*SMKPQMDVRSV
Trigger: TACGGACCTCACATCCATCTGAGGCTTCATGGACAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 72 bp CTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAATaGTCTGGACCATCTCTGGTCATTTGGTGGCATCAG +
Preference number: 4 (lower is better)
Translates to: LCMRLAHVLSCK*SGPSLVIWWHQ
Trigger: CTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGAGAAACCTCTGCTTTaGAGCAGGCCAATCCTACTC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSEKPLL*SRPILL
Trigger: GAGTAGGATTGGCCTGCTTCAAAGCAGAGGTTTCTC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGATAAGCATATTCCCATaGGAAACCTCTGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQISIFP*ETSALK
Trigger: CTTCAAAGCAGAGGTTTCTCATGGGAATATGCTTAT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTACCCTATCAGTGCTGTTaGATAACCTTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVPYQCC*ITLILQ
Trigger: CTGAAGGATCAAGGTTATTCAACAGCACTGATAGGG...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGTAACTTATACTGTTaGCATAGGTATTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGNLYC*HRYLLR
Trigger: CCTCAGCAAATACCTATGTCAACAGTATAAGTTACC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGGATTGCTTGTGAGTaGTTTTTGTTCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQWIACE*FLFPSK
Trigger: TTTGGAGGGGAACAAAAATCACTCACAAGCAATCCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGATCATGGATTGCTTGTaGGTGATTTTTGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEIMDCL*VIFVPL
Trigger: GAGGGGAACAAAAATCACTCACAAGCAATCCATGAT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAATAGCTCGATCGAATaGGAGCCGATCCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSNSSIE*EPILVP
Trigger: TGGGACTAGGATCGGCTCTCATTCGATCGAGCTATT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTCTTCATCTTCGCTATaGACAGCTGAAGACGATCTT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVESSSSL*TAEDDL
Trigger: AAGATCGTCTTCAGCTGTTCATAGCGAAGATGAAGA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000666110.2
ENST00000674429.1
CDS-3UTR TCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATTATTTCAGTCTCCACTaGGCACTATGCATGGGCCAC +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNYFSLH*ALCMGH
Trigger: GTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATA...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCCCATGAGAAACCTCTaGTTTGAAGCAGGCCAATCC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSPMRNL*FEAGQS
Trigger: GGATTGGCCTGCTTCAAAGCAGAGGTTTCTCATGGG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGCAGCTCATCCCAAGGTaGCATTTCCCTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRQLIPR*HFPISA
Trigger: AGCACTGATAGGGAAATGGCACCTTGGGATGAGCTG...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTGCCCTCTCCGGGCTTaGAGTCTCTCAGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPCPLRA*SLSDWS
Trigger: TGACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAGTGACCCCGACGATCTaGAGGGGGAGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSVTPTI*RGRKTS
Trigger: GCTGGTCTTCCTCCCCCTGCAGATCGTCGGGGTCAC...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGTGACCCCGACGATCTaGAGGGGGAGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQVTPTI*RGRKTS
Trigger: GCTGGTCTTCCTCCCCCTGCAGATCGTCGGGGTCAC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTGCCAGCAAAGTCTTTaGTGGAGAACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSCQQSL*WRTGLC
Trigger: ACACAGCCCTGTTCTCCAGCAAAGACTTTGCTGGCA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp AGGCTTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGCACTTCTTCTACATGTaGTCCCTGGTCCGATGTGAA +
Preference number: 4 (lower is better)
Translates to: RLAHVLSCKLSGPSLVIWHFFYM*SLVRCE
Trigger: TTCACATCGGACCAGGGAGCACATGTAGAAGAAGTG...CCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGTTATGTTTCCCCAGTaGCACTCTCAGGCGTGTTTG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSVMFPQ*HSQACL
Trigger: CAAACACGCCTGAGAGTGGCACTGGGGAAACATAAC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEGVPCE*PSIHSI
Trigger: AATAGAATGAATAGAGGGGCATTCACAAGGCACACC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTGCTTGCACTGGTGTaGCTTGTGAATGCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLLALV*LVNAPL
Trigger: TAGAGGGGCATTCACAAGGCACACCAGTGCAAGCAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTTTTTGTCATCTGCTTaGACTGGTGTGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEFLSSA*TGVPCE
Trigger: TTCACAAGGCACACCAGTGCAAGCAGATGACAAAAA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACCCAGCCCAATAGTATaGCCCTCTTGCTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRPSPIV*PSCSNF
Trigger: GAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCATGCCTTACAGCCTaGAACAAACAAGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPCLTA*NKQANK
Trigger: TTTGTTTGCTTGTTTGTTGCAGGCTGTAAGGCATGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGATTTTACAAGGAAGTaGCCAGATTGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSDFTRK*PDWAWE
Trigger: CTCCCAGGCCCAATCTGGGCACTTCCTTGTAAAATC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCTTGATGGTAGCATCCTaGATGGTAGCGGTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGLMVAS*MVAVLY
Trigger: GTAGAGAACCGCTACCATGCAGGATGCTACCATCAA...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCGGGCTCTTCCTGCCTaGTCCAAGGTTGCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILRALPA*SKVAAV
Trigger: CACAGCAGCAACCTTGGAGCAGGCAGGAAGAGCCCG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR GCA 90 bp TGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTCTGGTAACTGATAGATaGTGCATCCACCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: WHQQDRDIVRCREPSKLSLVTDR*CIHPLH
Trigger: ATGCAGTGGGTGGATGCAGCATCTATCAGTTACCAG...AGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTGAAGTGAGGAAAAGAGATATAGTGAGATaGAGAGAGCCATCGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGISTLNPEELARSEVRKRDIVR*REPSKL
Trigger: CAACTTCGATGGCTCTCTGCATCTCACTATATCTCT...TTTCCTCACTTCACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GGAGGTAGGGAGCTCAGGGATGGCAGCTCAGATCCGGAACAATTACAATTCAATAGCTATTTCTTACTTTaGATGAGGCTTGCCCACGTC +
Preference number: 4 (lower is better)
Translates to: GGRELRDGSSDPEQLQFNSYFLL*MRLAHV
Trigger: GACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCT...ATTGAATTGTAATTGTTCCGGATCTGAGCTGCCATCCCTGAGCTCCCTACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGGTCCCGTCAGCTGCTaGAGGCTTGGCCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQGPVSC*RLGQQH
Trigger: GTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCCAACGAAGGATGCCTaGAACCCGGATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPPTKDA*NPDTSF
Trigger: GAAGGAGGTATCCGGGTTCCAGGCATCCTTCGTTGG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGGCTCATCAATCTTCTaGCCAGCCTGTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRGSSIF*PACITL
Trigger: CAGGGTGATACAGGCTGGCCAGAAGATTGATGAGCC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCACCTCTGGCAGGGTCTaGGTGTGTCTGTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILTSGRV*VCLSAA
Trigger: AGCTGCGGACAGACACACCCAGACCCTGCCAGAGGT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTGATCGGGCACCTCTaGCAGGGTCTGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILLIGHL*QGLGVS
Trigger: AGACACACCCAGACCCTGCCAGAGGTGCCCGATCAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVENPRCR*SYVSPV
Trigger: CACTGGGGAAACATAACTCCATCTACACCTTGGATT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTAGCTGTTGAGCTCTaGCCCAAGCCTTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVAVEL*PKPSGD
Trigger: ATCACCTGAAGGCTTGGGCCAGAGCTCAACAGCTAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAACTTCCCAGGGTTGTaGGTAGGGATAGAGAAATTA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVENFPGL*VGIEKL
Trigger: TAATTTCTCTATCCCTACCCACAACCCTGGGAAGTT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCATGTCGGCTCCCTATaGCCACGCACTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILHVGSL*PRTLQQ
Trigger: CTGCTGGAGAGTGCGTGGCCATAGGGAGCCGACATG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAGCTTGGCTAAAGTTTaGCCAAGTGGAGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVESLAKV*PSGESL
Trigger: CAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTGCCCAGATTGGGCCTaGGAGAAGGTTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPCPDWA*EKVEEL
Trigger: AAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGCA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAGGAAGTGCCCAGATTaGGCCTGGGAGAAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPRKCPD*AWEKVE
Trigger: CTCAACCTTCTCCCAGGCCCAATCTGGGCACTTCCT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTACACCATGGAAAACTaGGGATTTATAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQYTMEN*GFIDRE
Trigger: TTCCCTGTCTATAAATCCCCAGTTTTCCATGGTGTA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTACCAGCTCTGTTCTTTTaGCTTAGGATTGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVPALFF*LRIDLA
Trigger: TGCCAAGTCAATCCTAAGCCAAAAGAACAGAGCTGG...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGTGTCTGGACCATCTCTaGTCATTTGGTGGCATCAGC +
Preference number: 4 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQCLDHL*SFGGIS
Trigger: GCTGATGCCACCAAATGACCAGAGATGGTCCAGACA...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAACTATGTTGCCCAGGGTaGCGTCAAACTCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKLCCPG*RQTPGL
Trigger: GAGTCCAGGAGTTTGACGCCACCCTGGGCAACATAG...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACAACAGCACTGTGCTTaGGCAGATAATGTGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRQQHCA*ADNVRR
Trigger: CCGCCTCACATTATCTGCCCAAGCACAGTGCTGTTG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTTGTTCCATGAAAACTaGTCGGGCACCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLFHEN*SGTSGR
Trigger: CCTGCCAGAGGTGCCCGATCAGTTTTCATGGAACAA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCCTCACCCCTCCAGTTaGGTAGCTGTTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILPHPSS*VAVELW
Trigger: CCAGAGCTCAACAGCTACTCAACTGGAGGGGTGAGG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACACTGGTGTGCCTTGTaGATGCCCCTCTATTCATTC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRHWCAL*MPLYSF
Trigger: GAATGAATAGAGGGGCATTCACAAGGCACACCAGTG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATACCACAAATCGACCTaGTTTCCAAATGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQYHKST*FPNVLK
Trigger: TTTCAGGACATTTGGAAATCAGGTCGATTTGTGGTA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGACTCCACAGGTAATATaGATGAGATGCTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQTPQVI*MRCFVN
Trigger: GTTTACAAAGCATCTCATTCATATTACCTGTGGAGT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAAATAGCTCGATCGAATaGGAGCCGATCCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRNSSIE*EPILVP
Trigger: TGGGACTAGGATCGGCTCTCATTCGATCGAGCTATT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTGTGTCAAAGCAAGAATaGGTGCGTGCATCAGATGAA +
Preference number: 4 (lower is better)
Translates to: WHQQDRDIVRCREPSKLSVSKQE*VRASDE
Trigger: TTCATCTGATGCACGCACTCATTCTTGCTTTGACAC...AGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTCTGTTCATGGTTTCTaGACCAGTGGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVESVHGF*TSGSLI
Trigger: TATTAAACTCCCACTGGTGCAGAAACCATGAACAGA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTCCGTGTTGACTTTTaGCAGCAAAGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLRVDF*QQSLCW
Trigger: CCAGCAAAGACTTTGCTGGCAAAAGTCAACACGGAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGACCCTGCACAGTCATaGTGTCCCAATAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSDPAQS*CPNRFH
Trigger: ATGAAACCTATTGGGACAGCATGACTGTGCAGGGTC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATCACTGCAAATGCATCTaGAGAACAGAGCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNHCKCI*RTEPSR
Trigger: TCTGCTAGGCTCTGTTCTGCAGATGCATTTGCAGTG...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATCTAGCTCACTGCAAATaGATCTGCAGAACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNLAHCK*ICRTEP
Trigger: AGGCTCTGTTCTGCAGATGCATTTGCAGTGAGCTAG...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTACGTATTCTAGCTCACTaGAAATGCATCTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVRILAH*KCICRT
Trigger: TGTTCTGCAGATGCATTTGCAGTGAGCTAGAATACG...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATGTTTCACGCTATTGTTaGCTCAAAGCTTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNVSRYC*LKASQG
Trigger: GCCTTGGGAAGCTTTGAGGCAACAATAGCGTGAAAC...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp ATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGGACTCGAGCATGTTATaGAGCCAGATCTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: IWWHQQDRDIVRCREPSKDSSML*SQICET
Trigger: TGTTTCACAGATCTGGCTGCATAACATGCTCGAGTC...CTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGTTGTCCATGGGGTCTTaGAGACATGCATCGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRLSMGS*RHASLQ
Trigger: TTGCAACGATGCATGTCTGCAAGACCCCATGGACAA...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAAAAGGCCTTCCAGATaGATGTGCTGTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSKRPSR*MCCSEG
Trigger: ACCCTCAGAACAGCACATCCATCTGGAAGGCCTTTT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTGATCGGGCACCTCTaGCAGGGTCTGGGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLIGHL*QGLGVS
Trigger: AGACACACCCAGACCCTGCCAGAGGTGCCCGATCAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTTCAGGTGATAAAATaGAGAATCAGTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLQVIK*RISPNP
Trigger: TGGATTTGGACTGATTCTCCATTTTATCACCTGAAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTACAAATTATGGAATaGAAAGCAGTTCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLQIME*KAVQER
Trigger: TCTCTCCTGAACTGCTTTCCATTCCATAATTTGTAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAACAGCATCTCCACAGTaGGCTTTTAATTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQTASPQ*AFNSEL
Trigger: AAGTTCTGAATTAAAAGCCCACTGTGGAGATGCTGT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACATGTCGGCTCCCTATaGCCACGCACTCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQHVGSL*PRTLQQ
Trigger: CTGCTGGAGAGTGCGTGGCCATAGGGAGCCGACATG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATACACCATGGAAAACTaGGGATTTATAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQYTMEN*GFIDRE
Trigger: TTCCCTGTCTATAAATCCCCAGTTTTCCATGGTGTA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAGCTAGTGGAATACAGTaGCCTGGATTTTTAGAGACA +
Preference number: 4 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVASGIQ*PGFLET
Trigger: TGTCTCTAAAAATCCAGGCCACTGTATTCCACTAGC...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCAGCTGCTGGAGGCTTaGCCAACAGCACTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILQLLEA*PTALCL
Trigger: CAAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674499.1
3UTR CAA 72 bp GGTTACATTACAGGTGTCCCATTCATGGGCACTGTCTaGGAATTGAGCAAACTCTGGGCAAATAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GYITGVPFMGTV*ELSKLWANRRW
Trigger: CCACCTTCTATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAATGGGACACCTGTAATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCCCTATCAGTGCTGTTaGATAACCTTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSPYQCC*ITLILQ
Trigger: CTGAAGGATCAAGGTTATTCAACAGCACTGATAGGG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAAGAAAGTTGTTCCATaGAAACTGATCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSKKVVP*KLIGHL
Trigger: GAGGTGCCCGATCAGTTTTCATGGAACAACTTTCTT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGAAGGACAGCACAGCTaGAGCCAGGGCTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILEGQHS*SQGFQR
Trigger: TCTTTGGAAGCCCTGGCTTCAGCTGTGCTGTCCTTC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACCTCACCCCTCCAGTTaGGTAGCTGTTGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQPHPSS*VAVELW
Trigger: CCAGAGCTCAACAGCTACTCAACTGGAGGGGTGAGG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTTCATTCTATTTCCATaGGTCCAAGACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSFILFP*VQDSGH
Trigger: GTGGCCAGAGTCTTGGACTCATGGAAATAGAATGAA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCACTGGTGTGCCTTGTaGATGCCCCTCTATTCATTC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPHWCAL*MPLYSF
Trigger: GAATGAATAGAGGGGCATTCACAAGGCACACCAGTG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGTATTTGCTGAGGGGTaGGTTAAGGTACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPVFAEG*VKVPPA
Trigger: TGCAGGAGGTACCTTAACTCACCCCTCAGCAAATAC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSALSWN*ANSGQI
Trigger: TATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGACTCCACAGGTAATATaGATGAGATGCTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVETPQVI*MRCFVN
Trigger: GTTTACAAAGCATCTCATTCATATTACCTGTGGAGT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAACTCCACAGGTAATATaGATGAGATGCTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQTPQVI*MRCFVN
Trigger: GTTTACAAAGCATCTCATTCATATTACCTGTGGAGT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATGAATTGGCAGGGTTCTaGAGGTTAGAAGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNELAGF*RLEGKL
Trigger: TAGTTTGCCTTCTAACCTTCAGAACCCTGCCAATTC...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATAGGGAGTTAAGTCCATaGATAGAACCTGAGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNRELSP*IEPELA
Trigger: TGCAAGCTCAGGTTCTATTCATGGACTTAACTCCCT...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGCCCTCTCCGGGCTTaGAGTCTCTCAGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILCPLRA*SLSDWS
Trigger: TGACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACACTTCTTCTACATGTaGTCCCTGGTCCGATGTGAA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRHFFYM*SLVRCE
Trigger: TTCACATCGGACCAGGGAGCACATGTAGAAGAAGTG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATGGGCCAACGAAGGATaGCTGGAACCCGGATACCTC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQWANEG*LEPGYL
Trigger: GAGGTATCCGGGTTCCAGGCATCCTTCGTTGGCCCA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCCTTCCAGATGGATGTaGTGTTCTGAGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILPSRWM*CSEGAS
Trigger: GCTGGCACCCTCAGAACAGCACATCCATCTGGAAGG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTGTCCGCAGCTTCCTaGATGACTTTGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLSAAS*MTLRIS
Trigger: TGAAATCCTCAAAGTCATGCAGGAAGCTGCGGACAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGTGAGCTTTGCCACATaGGTCTGTCTGGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQVSFAT*VCLVPR
Trigger: CCTGGGGACCAGACAGACGCATGTGGCAAAGCTCAC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGAAGATGGTGAGCTTTaGCACATGCGTCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPEDGEL*HMRLSG
Trigger: ACCAGACAGACGCATGTGGCAAAGCTCACCATCTTC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAACTATCTCCAGCTGTaGCACTACGAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILNYLQL*HYEALS
Trigger: GGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTATGGCTAACATTCTCTaGAAACCGCTGTGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSMANIL*KPLCGL
Trigger: TAACCCACACAGCGGTTTGCAGAGAATGTTAGCCAT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAGGAAGAATCTTGTATaGTTTTCAGCTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQRKNLV*FSAFNN
Trigger: GTTGTTGAAAGCTGAAAAGCATACAAGATTCTTCCT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGTAAACAAGCAGCCATaGCTTACAGCCTGCAACAAA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSVNKQP*LTACNK
Trigger: TTTGTTGCAGGCTGTAAGGCATGGCTGCTTGTTTAC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTAGTCCCAATACCATaGCCTTCTCACTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLVPIP*PSHSNF
Trigger: GAAATTGGAGTGAGAAGGGCATGGTATTGGGACTAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATCGGAAAACCAAGAATaGTCAGGGCCTCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRSENQE*SGPQKA
Trigger: AGCTTTCTGAGGCCCTGAGCATTCTTGGTTTTCCGA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGCAGACATGCATCGTTaGAAATGCAGTCTGGTAACT +
Preference number: 4 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQADMHR*KCSLVT
Trigger: AGTTACCAGACTGCATTTGCAACGATGCATGTCTGC...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCAATGTGACACCTCACTaGTGCCATCATGTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGNVTPH*CHHVAY
Trigger: ATAAGCTACATGATGGCAGCAGTGAGGTGTCACATT...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTGGTTTCTGCACCAGTaGGAGTTTAATAAGCATATT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEWFLHQ*EFNKHI
Trigger: AATATGCTTATTAAACTCCCACTGGTGCAGAAACCA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATGGTTTCTGCACCAGTaGGAGTTTAATAAGCATATT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQWFLHQ*EFNKHI
Trigger: AATATGCTTATTAAACTCCCACTGGTGCAGAAACCA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp ATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTGCAGTCTCTCAGATTaGTCAAAGAGATCCCATAGA +
Preference number: 4 (lower is better)
Translates to: IWWHQQDRDIVRCREPSKCSLSD*SKRSHR
Trigger: TCTATGGGATCTCTTTGACCAATCTGAGAGACTGCA...CTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAAAAAGGCCTTCCAGATaGATGTGCTGTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRKRPSR*MCCSEG
Trigger: ACCCTCAGAACAGCACATCCATCTGGAAGGCCTTTT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAGAAGCACACGTGTGTaGCAAAGCATCCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPRSTRV*QSIRWN
Trigger: GTTCCAACGGATGCTTTGCCACACACGTGTGCTTCT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGGCAAGACAGGCCGGTaGAAGGACAGCACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQGKTGR*KDSTAE
Trigger: TTCAGCTGTGCTGTCCTTCCACCGGCCTGTCTTGCC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATTTTCTCTATCACACTaGCAAGACAGGCCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRFSLSH*QDRPVE
Trigger: TTCCACCGGCCTGTCTTGCCAGTGTGATAGAGAAAA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTTCTGATACTAGTTTaGTTTTCCAAAGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVLILV*FSKGIQ
Trigger: CTGGATTCCTTTGGAAAACCAAACTAGTATCAGAAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGTTCTGATACTAGTTTaGTTTTCCAAAGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEVLILV*FSKGIQ
Trigger: CTGGATTCCTTTGGAAAACCAAACTAGTATCAGAAC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGCCCAGATTGGGCCTaGGAGAAGGTTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILCPDWA*EKVEEL
Trigger: AAGCTCCTCAACCTTCTCCCAGGCCCAATCTGGGCA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTCAGGGGCAGTGGATaGAAGATTACCAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVRGSG*KITKRK
Trigger: TTTCCTCTTGGTAATCTTCCATCCACTGCCCCTGAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 72 bp ATAGTGAGATGCAGAGAGCCATCGAAGTTGTCTGACTaGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCA +
Preference number: 4 (lower is better)
Translates to: IVRCREPSKLSD*VETNVTWLGVS
Trigger: TGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATCTCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACCATTACTTCCGCCATaGATTTCTCCTTTGGAAGAC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRPLLPP*ISPLED
Trigger: GTCTTCCAAAGGAGAAATTCATGGCGGAAGTAATGG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGATCACGTCCATCAATaGTCCTGTCCTCAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILDHVHQ*SCPQAR
Trigger: CCTTGCCTGAGGACAGGATCATTGATGGACGTGATC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATGGAAGAGAAACTCATaGTCGGAGCGTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRWKRNS*SERWLF
Trigger: AAAAAGCCAACGCTCCGATCATGAGTTTCTCTTCCA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAAAGAAAGTTGTTCCATaGAAACTGATCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRKKVVP*KLIGHL
Trigger: GAGGTGCCCGATCAGTTTTCATGGAACAACTTTCTT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTGGATTGCTTGTGAGTaGTTTTTGTTCCCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSWIACE*FLFPSK
Trigger: TTTGGAGGGGAACAAAAATCACTCACAAGCAATCCA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTATCATGGATTGCTTGTaGGTGATTTTTGTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSIMDCL*VIFVPL
Trigger: GAGGGGAACAAAAATCACTCACAAGCAATCCATGAT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGACTGGACTCAGCTCTaGATACACCATGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPDWTQL*IHHGKL
Trigger: CAGTTTTCCATGGTGTATTCAGAGCTGAGTCCAGTC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAGATCCAGAATTGTTCTaGGGGTGCCAGCGCACAGCA +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSDPELF*GCQRTA
Trigger: TGCTGTGCGCTGGCACCCTCAGAACAATTCTGGATC...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp TCGAAGTTGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGATTTCTTACTTTGCATaGGGCTTGCCCACGTCCTTT +
Preference number: 4 (lower is better)
Translates to: SKLSDLVETNVTWLGVSKISYFA*GLPTSF
Trigger: AAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAAT...CTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTGTGATGGAGGAGATTaGAACTTCACTTGTTCATCC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSCDGGD*NFTCSS
Trigger: GGATGAACAAGTGAAGTTGCAATCTCCTCCATCACA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCTGTCCGCAGCTTCCTaGATGACTTTGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLSAAS*MTLRIS
Trigger: TGAAATCCTCAAAGTCATGCAGGAAGCTGCGGACAG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCACCTTTTTGTCATCTaGTTGCACTGGTGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPHLFVI*LHWCAL
Trigger: CAAGGCACACCAGTGCAAGCAGATGACAAAAAGGTG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGATTGCCTTTTTATTATaGTGGTTATTGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEIAFLL*WLLHHC
Trigger: GCAGTGATGCAATAACCAGCATAATAAAAAGGCAAT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAATTGCCTTTTTATTATaGTGGTTATTGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQIAFLL*WLLHHC
Trigger: GCAGTGATGCAATAACCAGCATAATAAAAAGGCAAT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAACTATCTCCAGCTGTaGCACTACGAGGCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQNYLQL*HYEALS
Trigger: GGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAATGGCTAACATTCTCTaGAAACCGCTGTGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRMANIL*KPLCGL
Trigger: TAACCCACACAGCGGTTTGCAGAGAATGTTAGCCAT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAGGAAGAATCTTGTATaGTTTTCAGCTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVERKNLV*FSAFNN
Trigger: GTTGTTGAAAGCTGAAAAGCATACAAGATTCTTCCT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCCATGCCTTACAGCCTaGAACAAACAAGCAAACAAA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSPCLTA*NKQANK
Trigger: TTTGTTTGCTTGTTTGTTGCAGGCTGTAAGGCATGG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTAAACAAGCAGCCATaGCTTACAGCCTGCAACAAA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVNKQP*LTACNK
Trigger: TTTGTTGCAGGCTGTAAGGCATGGCTGCTTGTTTAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTGCTCCAAGGTTGCTaGTGTGGGCGCACTTTGATG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLLQGC*CGRTLM
Trigger: CATCAAAGTGCGCCCACAGCAGCAACCTTGGAGCAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR GCA 90 bp TCGAAGTTGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGTGCAACCATTGTATCTaGTTGCTTGGACTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SKLSDLVETNVTWLGVSKCNHCI*LLGLSA
Trigger: AGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCA...CTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATTGCAGTCTCTCAGATTaGTCAAAGAGATCCCATAGA +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNCSLSD*SKRSHR
Trigger: TCTATGGGATCTCTTTGACCAATCTGAGAGACTGCA...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTGCAGTCTCTCAGATTaGTCAAAGAGATCCCATAGA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSCSLSD*SKRSHR
Trigger: TCTATGGGATCTCTTTGACCAATCTGAGAGACTGCA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACATGAATTTCTCCTTTaGAAGACACTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQHEFLL*KTLLLH
Trigger: ATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCATG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCATGAATTTCTCCTTTaGAAGACACTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEHEFLL*KTLLLH
Trigger: ATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCATG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACCAACGAAGGATGCCTaGAACCCGGATACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQPTKDA*NPDTSF
Trigger: GAAGGAGGTATCCGGGTTCCAGGCATCCTTCGTTGG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACCCCAAAGAAAACAGTaGAATCCAAGAATTATACTA +
Preference number: 4 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQPQRKQ*NPRIIL
Trigger: TAGTATAATTCTTGGATTCCACTGTTTTCTTTGGGG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTGGGCAAATAGAAGGTaGTCAGACAAGTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSWANRR*SDKSTK
Trigger: TTTTGTGGACTTGTCTGACCACCTTCTATTTGCCCA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAGAAAGCCCAAGTCATaGCTAACATTCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSRKPKS*LTFSAN
Trigger: GTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAACTTAAAGGGCAACTaGGGAAATGCTGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSNLKGN*GNAVKS
Trigger: GGATTTGACAGCATTTCCCCAGTTGCCCTTTAAGTT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAGGAAGTGCCCAGATTaGGCCTGGGAGAAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQRKCPD*AWEKVE
Trigger: CTCAACCTTCTCCCAGGCCCAATCTGGGCACTTCCT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGTCAGGGGCAGTGGATaGAAGATTACCAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPVRGSG*KITKRK
Trigger: TTTCCTCTTGGTAATCTTCCATCCACTGCCCCTGAC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
3UTR CAA 72 bp GACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGTaGTCTGACTTGGTGGAAACAAATGTGACTTGGCTT +
Preference number: 4 (lower is better)
Translates to: DRDIVRCREPSK*SDLVETNVTWL
Trigger: AAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCTGCATCTCACTATATCTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGTGGGTCGTGATGGGTaGCATAACTCCCGAAACAGA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQVGRDG*HNSRNR
Trigger: TCTGTTTCGGGAGTTATGTCACCCATCACGACCCAC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATTGTTCCATGAAAACTaGTCGGGCACCTCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLFHEN*SGTSGR
Trigger: CCTGCCAGAGGTGCCCGATCAGTTTTCATGGAACAA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTTCATTCTATTTCCATaGGTCCAAGACTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPFILFP*VQDSGH
Trigger: GTGGCCAGAGTCTTGGACTCATGGAAATAGAATGAA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGGTAACTTATACTGTTaGCATAGGTATTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSGNLYC*HRYLLR
Trigger: CCTCAGCAAATACCTATGTCAACAGTATAAGTTACC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAATAGCTCGATCGAATaGGAGCCGATCCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILNSSIE*EPILVP
Trigger: TGGGACTAGGATCGGCTCTCATTCGATCGAGCTATT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTCTGTTCATGGTTTCTaGACCAGTGGGAGTTTAATA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSSVHGF*TSGSLI
Trigger: TATTAAACTCCCACTGGTGCAGAAACCATGAACAGA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGTGCCCTCTCCGGGCTTaGAGTCTCTCAGATTGGTCA +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLCPLRA*SLSDWS
Trigger: TGACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCA...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGCCAGCAAAGTCTTTaGTGGAGAACAGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILCQQSL*WRTGLC
Trigger: ACACAGCCCTGTTCTCCAGCAAAGACTTTGCTGGCA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGAAGATGGTGAGCTTTaGCACATGCGTCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILEDGEL*HMRLSG
Trigger: ACCAGACAGACGCATGTGGCAAAGCTCACCATCTTC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGGTGTGCCTTGTGAATaGCCCTCTATTCATTCTATT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRGVPCE*PSIHSI
Trigger: AATAGAATGAATAGAGGGGCATTCACAAGGCACACC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCATAGTATGCCCCTCTTaGTCCAACTTCCCAGGGTTG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILIVCPS*SNFPGL
Trigger: CAACCCTGGGAAGTTGGAGCAAGAGGGGCATACTAT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACCCAGCCCAATAGTATaGCCCTCTTGCTCCAACTTC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQPSPIV*PSCSNF
Trigger: GAAGTTGGAGCAAGAGGGGCATACTATTGGGCTGGG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGATTTTACAAGGAAGTaGCCAGATTGGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILDFTRK*PDWAWE
Trigger: CTCCCAGGCCCAATCTGGGCACTTCCTTGTAAAATC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATGCAGTCTCTCAGATTaGTCAAAGAGATCCCATAGA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRCSLSD*SKRSHR
Trigger: TCTATGGGATCTCTTTGACCAATCTGAGAGACTGCA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAGAAGCACACGTGTGTaGCAAAGCATCCGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILRSTRV*QSIRWN
Trigger: GTTCCAACGGATGCTTTGCCACACACGTGTGCTTCT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGTGGGTTTCTCTCTCTaGGATCTTTGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSVGFSL*DLWKYQ
Trigger: TTGATATTTCCAAAGATCCCAGAGAGAGAAACCCAC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAAATCCAAGGTGTAGATaGAGTTATGTTTCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRNPRCR*SYVSPV
Trigger: CACTGGGGAAACATAACTCCATCTACACCTTGGATT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAAATGCATAAGCAGGTaGATGGCAGCTTCTCTCGAT +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPKCISR*MAASLD
Trigger: ATCGAGAGAAGCTGCCATCCACCTGCTTATGCATTT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAAACTCACTAAGGTTTaGATATGCAACTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSKLTKV*ICNSTG
Trigger: ACCTGTGGAGTTGCATATCCAAACCTTAGTGAGTTT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAAGCTTGGCTAAAGTTTaGCCAAGTGGAGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRSLAKV*PSGESL
Trigger: CAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTACACCATGGAAAACTaGGGATTTATAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSYTMEN*GFIDRE
Trigger: TTCCCTGTCTATAAATCCCCAGTTTTCCATGGTGTA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATCCCATTTGTCAATTTTaGCTTTTGCTGCCATTGCTT +
Preference number: 4 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNPICQF*LLLPLL
Trigger: AAGCAATGGCAGCAAAAGCCAAAATTGACAAATGGG...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp ACAATTCAATACTTGGGCATCAGCACTCTAAATCCCGAGGAGCTAGCCAGGAGTTGTCTTCATTCAGCTTaGCTTAATGACTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: TIQYLGISTLNPEELARSCLHSA*LNDFIL
Trigger: CAAGATGAAGTCATTAAGCCAAGCTGAATGAAGACA...ACTCCTGGCTAGCTCCTCGGGATTTAGAGTGCTGATGCCCAAGTATTGAATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
3UTR CAA 72 bp AATGTGATAATTACTGTGATTGGTTTCACGCTATTGTaGCCTCAAAGCTTCCCAAGGCAGGCAAGCGTATTC +
Preference number: 4 (lower is better)
Translates to: NVIITVIGFTLL*PQSFPRQASVF
Trigger: GAATACGCTTGCCTGCCTTGGGAAGCTTTGAGGCAACAATAGCGTGAAACCAATCACAGTAATTATCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
3UTR CAA 72 bp GTTAATGTGATAATTACTGTGATTGGTTTCACGCTATaGTTGCCTCAAAGCTTCCCAAGGCAGGCAAGCGTA +
Preference number: 4 (lower is better)
Translates to: VNVIITVIGFTL*LPQSFPRQASV
Trigger: TACGCTTGCCTGCCTTGGGAAGCTTTGAGGCAACAATAGCGTGAAACCAATCACAGTAATTATCACATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATGGGGAACTGAGCTGTaGTGGAGGAGATTGCAACTT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQWGTEL*WRRLQL
Trigger: AAGTTGCAATCTCCTCCATCACAGCTCAGTTCCCCA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR TCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATTGGGGGAAATGGGATaGAAACAAAATCATGCATCT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLGEMG*KQNHAS
Trigger: AGATGCATGATTTTGTTTTCATCCCATTTCCCCCAA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTACTCCACAGGTAATATaGATGAGATGCTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSTPQVI*MRCFVN
Trigger: GTTTACAAAGCATCTCATTCATATTACCTGTGGAGT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAATAGCTCGATCGAATaGGAGCCGATCCTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQNSSIE*EPILVP
Trigger: TGGGACTAGGATCGGCTCTCATTCGATCGAGCTATT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGACTGGACTCAGCTCTaGATACACCATGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILDWTQL*IHHGKL
Trigger: CAGTTTTCCATGGTGTATTCAGAGCTGAGTCCAGTC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTCTTCATCTTCGCTATaGACAGCTGAAGACGATCTT +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPSSSSL*TAEDDL
Trigger: AAGATCGTCTTCAGCTGTTCATAGCGAAGATGAAGA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000666110.2
ENST00000674429.1
CDS-3UTR TCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCACCCATGCCTATGTCCTaGATGGTACTGCCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSPMPMS*MVLPRF
Trigger: AAACCTAGGCAGTACCATTCAGGACATAGGCATGGG...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAAATGCAGCCAGATCTGTaGAACAACTTCTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKMQPDL*NNFLSS
Trigger: TGAAGACAAGAAGTTGTTTCACAGATCTGGCTGCAT...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCATCCTACTCAATCACTaGAACCTCACTACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILILLNH*NLTTAG
Trigger: CCCAGCTGTAGTGAGGTTGCAGTGATTGAGTAGGAT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR GCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCACAGCTCATCCCAAGGTaGCATTTCCCTATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSQLIPR*HFPISA
Trigger: AGCACTGATAGGGAAATGGCACCTTGGGATGAGCTG...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTCCGTGTTGACTTTTaGCAGCAAAGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILLRVDF*QQSLCW
Trigger: CCAGCAAAGACTTTGCTGGCAAAAGTCAACACGGAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGACCCTGCACAGTCATaGTGTCCCAATAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILDPAQS*CPNRFH
Trigger: ATGAAACCTATTGGGACAGCATGACTGTGCAGGGTC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp TTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCAATTTGTTACGGGTTTaGCTGATAGAAGCATTACAA +
Preference number: 4 (lower is better)
Translates to: LPTSFLVNCLDHLWSFGGNLLRV*LIEALQ
Trigger: TTGTAATGCTTCTATCAGGCAAACCCGTAACAAATT...GCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTCATCCTCTGTTCATaGTTTCTGCACCAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILFILCS*FLHQWE
Trigger: CTCCCACTGGTGCAGAAACCATGAACAGAGGATGAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTTGCAGTCTCTCAGATTaGTCAAAGAGATCCCATAGA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPCSLSD*SKRSHR
Trigger: TCTATGGGATCTCTTTGACCAATCTGAGAGACTGCA...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGGGCTCATCAATCTTCTaGCCAGCCTGTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLGSSIF*PACITL
Trigger: CAGGGTGATACAGGCTGGCCAGAAGATTGATGAGCC...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTGGGTTTCTCTCTCTaGGATCTTTGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVGFSL*DLWKYQ
Trigger: TTGATATTTCCAAAGATCCCAGAGAGAGAAACCCAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTTCAGGTGATAAAATaGAGAATCAGTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLQVIK*RISPNP
Trigger: TGGATTTGGACTGATTCTCCATTTTATCACCTGAAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTACAAATTATGGAATaGAAAGCAGTTCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLQIME*KAVQER
Trigger: TCTCTCCTGAACTGCTTTCCATTCCATAATTTGTAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAACAGCATCTCCACAGTaGGCTTTTAATTCAGAACTT +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRTASPQ*AFNSEL
Trigger: AAGTTCTGAATTAAAAGCCCACTGTGGAGATGCTGT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGAATTGAGCAAACTCTaGGCAAATAGAAGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPELSKL*ANRRWS
Trigger: TGACCACCTTCTATTTGCCCAGAGTTTGCTCAATTC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAGAAAGCCCAAGTCATaGCTAACATTCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPRKPKS*LTFSAN
Trigger: GTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAACTTAAAGGGCAACTaGGGAAATGCTGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPNLKGN*GNAVKS
Trigger: GGATTTGACAGCATTTCCCCAGTTGCCCTTTAAGTT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGTTCTGATACTAGTTTaGTTTTCCAAAGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSVLILV*FSKGIQ
Trigger: CTGGATTCCTTTGGAAAACCAAACTAGTATCAGAAC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTAGCTTGGCTAAAGTTTaGCCAAGTGGAGAATCTTTG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPSLAKV*PSGESL
Trigger: CAAAGATTCTCCACTTGGCCAAACTTTAGCCAAGCT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TCGAAGTTGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGAAATGTGACTTGGCTTaGAGTGTCAAAGCAAGAATG +
Preference number: 4 (lower is better)
Translates to: SKLSDLVETNVTWLGVSKKCDLA*SVKARM
Trigger: CATTCTTGCTTTGACACTCCAAGCCAAGTCACATTT...CTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGAGAGGTTTTAAAACCTaGCCATGGAAGAATCATTGT +
Preference number: 4 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQRGFKT*PWKNHC
Trigger: ACAATGATTCTTCCATGGCCAGGTTTTAAAACCTCT...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR TCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGGTAACTTATACTGTTaGCATAGGTATTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPGNLYC*HRYLLR
Trigger: CCTCAGCAAATACCTATGTCAACAGTATAAGTTACC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGGTGGTTTAGACTTTaGAACTATCTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILWWFRL*NYLQLC
Trigger: GCACAGCTGGAGATAGTTTCAAAGTCTAAACCACCA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGCACTGTCTTGGAATTaGGCAAACTCTGGGCAAATA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILALSWN*ANSGQI
Trigger: TATTTGCCCAGAGTTTGCTCAATTCCAAGACAGTGC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGACTGGACTCAGCTCTaGATACACCATGGAAAACTG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQDWTQL*IHHGKL
Trigger: CAGTTTTCCATGGTGTATTCAGAGCTGAGTCCAGTC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCAACACTGGCTTGAGTaGTATCTTGCAACACAGAAC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILQHWLE*YLATQN
Trigger: GTTCTGTGTTGCAAGATATCACTCAAGCCAGTGTTG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTCCGTGTTGACTTTTaGCAGCAAAGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLRVDF*QQSLCW
Trigger: CCAGCAAAGACTTTGCTGGCAAAAGTCAACACGGAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTGTCCGCAGCTTCCTaGATGACTTTGAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLSAAS*MTLRIS
Trigger: TGAAATCCTCAAAGTCATGCAGGAAGCTGCGGACAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACCAGTAATAATGACTTaGCTTCCAATAACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRPVIMT*LPITKV
Trigger: CACTTTGGTTATTGGAAGGCAAGTCATTATTACTGG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTAGTCCCAATACCATaGCCTTCTCACTCCAATTTC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILLVPIP*PSHSNF
Trigger: GAAATTGGAGTGAGAAGGGCATGGTATTGGGACTAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGCATGAATTTCTCCTTTaGAAGACACTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQHEFLL*KTLLLH
Trigger: ATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCATG...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAAAAGGCCTTCCAGATaGATGTGCTGTTCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQKRPSR*MCCSEG
Trigger: ACCCTCAGAACAGCACATCCATCTGGAAGGCCTTTT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATTTTCTCTATCACACTaGCAAGACAGGCCGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQFSLSH*QDRPVE
Trigger: TTCCACCGGCCTGTCTTGCCAGTGTGATAGAGAAAA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAGGCTTTCCTCAGGATaGGCTGGTGGTTTAGACTTT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQRLSSG*AGGLDF
Trigger: AAAGTCTAAACCACCAGCCCATCCTGAGGAAAGCCT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTTATCCCACAATTTCTaGAACGAGAAATCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLSHNF*NEKSKL
Trigger: TAACTTGGATTTCTCGTTCCAGAAATTGTGGGATAA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGTCAGGGGCAGTGGATaGAAGATTACCAAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQVRGSG*KITKRK
Trigger: TTTCCTCTTGGTAATCTTCCATCCACTGCCCCTGAC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAGGCTTAGGATTGACTTaGCAATGCGGGCTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSGLGLT*QCGLLF
Trigger: AAAAAGGAGCCCGCATTGCCAAGTCAATCCTAAGCC...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGACTGAGCACTATGCATaGGCCACAGTCAGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLTEHYA*ATVRQK
Trigger: TTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGT...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACCCTATCAGTGCTGTTaGATAACCTTGATCCTTCAG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQPYQCC*ITLILQ
Trigger: CTGAAGGATCAAGGTTATTCAACAGCACTGATAGGG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATGGAAGAGAAACTCATaGTCGGAGCGTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQWKRNS*SERWLF
Trigger: AAAAAGCCAACGCTCCGATCATGAGTTTCTCTTCCA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAAGAAAGTTGTTCCATaGAAACTGATCGGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQKKVVP*KLIGHL
Trigger: GAGGTGCCCGATCAGTTTTCATGGAACAACTTTCTT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATGGTGGTTTAGACTTTaGAACTATCTCCAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQWWFRL*NYLQLC
Trigger: GCACAGCTGGAGATAGTTTCAAAGTCTAAACCACCA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACAACACTGGCTTGAGTaGTATCTTGCAACACAGAAC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQQHWLE*YLATQN
Trigger: GTTCTGTGTTGCAAGATATCACTCAAGCCAGTGTTG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGCTCCGTGTTGACTTTTaGCAGCAAAGTCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLLRVDF*QQSLCW
Trigger: CCAGCAAAGACTTTGCTGGCAAAAGTCAACACGGAG...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGTAAACAAGCAGCCATaGCTTACAGCCTGCAACAAA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQVNKQP*LTACNK
Trigger: TTTGTTGCAGGCTGTAAGGCATGGCTGCTTGTTTAC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCTTCAGGTGATAAAATaGAGAATCAGTCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPLQVIK*RISPNP
Trigger: TGGATTTGGACTGATTCTCCATTTTATCACCTGAAG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACCCCAAAGAAAACAGTaGAATCCAAGAATTATACTA +
Preference number: 4 (lower is better)
Translates to: TGVPCECPSIHSISMSPRPQRKQ*NPRIIL
Trigger: TAGTATAATTCTTGGATTCCACTGTTTTCTTTGGGG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAGAAAGCCCAAGTCATaGCTAACATTCTCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILRKPKS*LTFSAN
Trigger: GTTTGCAGAGAATGTTAGCCATGACTTGGGCTTTCT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGTGGAAGAGAAACTCATaGTCGGAGCGTTGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLWKRNS*SERWLF
Trigger: AAAAAGCCAACGCTCCGATCATGAGTTTCTCTTCCA...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGGTAACTTATACTGTTaGCATAGGTATTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILGNLYC*HRYLLR
Trigger: CCTCAGCAAATACCTATGTCAACAGTATAAGTTACC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTCATGAATTTCTCCTTTaGAAGACACTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPHEFLL*KTLLLH
Trigger: ATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCATG...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGTGGGTTTCTCTCTCTaGGATCTTTGGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILVGFSL*DLWKYQ
Trigger: TTGATATTTCCAAAGATCCCAGAGAGAGAAACCCAC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAACTTAAAGGGCAACTaGGGAAATGCTGTCAAATCC +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQNLKGN*GNAVKS
Trigger: GGATTTGACAGCATTTCCCCAGTTGCCCTTTAAGTT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAAACTCACTAAGGTTTaGATATGCAACTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILKLTKV*ICNSTG
Trigger: ACCTGTGGAGTTGCATATCCAAACCTTAGTGAGTTT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR TCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGTCTTCATCTTCGCTATaGACAGCTGAAGACGATCTT +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLSSSSL*TAEDDL
Trigger: AAGATCGTCTTCAGCTGTTCATAGCGAAGATGAAGA...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCAGTTTGTAGTTCTCCTTaGAGATCCAGAATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSVCSSP*RSRIVL
Trigger: CAGAACAATTCTGGATCTTCAAGGAGAACTACAAAC...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR TCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGATGTGGCATTATTTCTaGGGGCTCTGTTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLMWHYF*GLCFVP
Trigger: TGGAACAAAACAGAGCCCTCAGAAATAATGCCACAT...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCCAGTAATAATGACTTaGCTTCCAATAACCAAAGTG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILPVIMT*LPITKV
Trigger: CACTTTGGTTATTGGAAGGCAAGTCATTATTACTGG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTCAGTCACAAAACTTaGATACATGACTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLSHKT*IHDCSL
Trigger: CAGAGAACAGTCATGTATGCAAGTTTTGTGACTGAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTACAAATTATGGAATaGAAAGCAGTTCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILLQIME*KAVQER
Trigger: TCTCTCCTGAACTGCTTTCCATTCCATAATTTGTAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAAACTCACTAAGGTTTaGATATGCAACTCCACAGGT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQKLTKV*ICNSTG
Trigger: ACCTGTGGAGTTGCATATCCAAACCTTAGTGAGTTT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGTTCTGATACTAGTTTaGTTTTCCAAAGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILVLILV*FSKGIQ
Trigger: CTGGATTCCTTTGGAAAACCAAACTAGTATCAGAAC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATACACCATGGAAAACTaGGGATTTATAGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQYTMEN*GFIDRE
Trigger: TTCCCTGTCTATAAATCCCCAGTTTTCCATGGTGTA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCATTGCCTTTTTATTATaGTGGTTATTGCATCACTGC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILIAFLL*WLLHHC
Trigger: GCAGTGATGCAATAACCAGCATAATAAAAAGGCAAT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR GCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAGGAAGAATCTTGTATaGTTTTCAGCTTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILRKNLV*FSAFNN
Trigger: GTTGTTGAAAGCTGAAAAGCATACAAGATTCTTCCT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTATCCCACAATTTCTaGAACGAGAAATCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: DREIIANFQKAQVMANILLSHNF*NEKSKL
Trigger: TAACTTGGATTTCTCGTTCCAGAAATTGTGGGATAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACATGAATTTCTCCTTTaGAAGACACTTCTTCTACAT +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQHEFLL*KTLLLH
Trigger: ATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCATG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATTATCCCACAATTTCTaGAACGAGAAATCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLSHNF*NEKSKL
Trigger: TAACTTGGATTTCTCGTTCCAGAAATTGTGGGATAA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CCA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGGATAATTACTGTGATTaGTTTCACGCTATTGTTGCC +
Preference number: 4 (lower is better)
Translates to: IFMILILPTHEHEMFFHLDNYCD*FHAIVA
Trigger: GGCAACAATAGCGTGAAACCAATCACAGTAATTATC...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS CCA 90 bp GGTCGGCGGCCCGCGCGTGGGGCCGGAGCACGTGGGAGCAGTCCCTaGGGTCCACCGGGCGGGCGCGCGGCTCCGCGTCCTCTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: GRRPARGAGARGSSP*GPPGGRAAPRPLLR
Trigger: TCTGAGGAGAGGACGCGGAGCCGCGCGCCCGCCCGGTGGACCCCAGGGACTGCTCCCACGTGCTCCGGCCCCACGCGCGGGCCGCCGACC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS CCA 90 bp CGCGCCGTCAACAGTGTAGAGGCACAGAAGGTCCGTCAAGTGGCCTaGCTGCCTAGGGTGACCAGCACCGGGGACATCACCTGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: RAVNSVEAQKVRQVA*LPRVTSTGDITCGL
Trigger: TAGCCCACAGGTGATGTCCCCGGTGCTGGTCACCCTAGGCAGCCAGGCCACTTGACGGACCTTCTGTGCCTCTACACTGTTGACGGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS GCA 90 bp CCCAGTGCCACTCTCAGGCGTGTTTGTAGTGAAGATGGTGAGCTTTaGCACATGCGTCTGTCTGGTCCCCAGGCGCTGCTAGCGGCTCAG +
Preference number: 5 (lower is better)
Translates to: PSATLRRVCSEDGEL*HMRLSGPQALLAAQ
Trigger: CTGAGCCGCTAGCAGCGCCTGGGGACCAGACAGACGCATGTGGCAAAGCTCACCATCTTCACTACAAACACGCCTGAGAGTGGCACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCCAGTAAGGGCGGTCTaGTGTGGGCGTGGGGACGGT +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQPVRAV*CGRGDG
Trigger: ACCGTCCCCACGCCCACACAAGACCGCCCTTACTGG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS CCA 90 bp CGGTTCTCTACCTGGCGGTTTTGCAGCCCTGAGGGCATCTGGCAATaGCGATGTCAGGAGACATTTTGGCTGTCACAGCTGGCGAGGAGT +
Preference number: 5 (lower is better)
Translates to: RFSTWRFCSPEGIWQ*RCQETFWLSQLARS
Trigger: ACTCCTCGCCAGCTGTGACAGCCAAAATGTCTCCTGACATCGCCATTGCCAGATGCCCTCAGGGCTGCAAAACCGCCAGGTAGAGAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664306.2
ENST00000666110.2
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTGCCCTCTCCGGGCTaGCAGTCTCTCAGATTGGTC +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLPSPG*QSLRLV
Trigger: GACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS GCA 90 bp TCCTACTCAATCACTGCAACCTCACTACAGCTGGGTCCCGTCAGCTaGTGGAGGCTTGGCCAACAGCACTGTGCTTGGGCAGATAATGTG +
Preference number: 5 (lower is better)
Translates to: SYSITATSLQLGPVS*WRLGQQHCAWADNV
Trigger: CACATTATCTGCCCAAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTGCAGTGATTGAGTAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS CCA 90 bp TACTCAATCACTGCAACCTCACTACAGCTGGGTCCCGTCAGCTGCTaGAGGCTTGGCCAACAGCACTGTGCTTGGGCAGATAATGTGAGG +
Preference number: 5 (lower is better)
Translates to: YSITATSLQLGPVSC*RLGQQHCAWADNVR
Trigger: CCTCACATTATCTGCCCAAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTGCAGTGATTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS CCA 90 bp TTGAAGCAGGCCAATCCTACTCAATCACTGCAACCTCACTACAGCTaGGTCCCGTCAGCTGCTGGAGGCTTGGCCAACAGCACTGTGCTT +
Preference number: 5 (lower is better)
Translates to: LKQANPTQSLQPHYS*VPSAAGGLANSTVL
Trigger: AAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTGCAGTGATTGAGTAGGATTGGCCTGCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGTGGCAAAGCATCCGTaGGAACCCACGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQVAKHP*EPTGLK
Trigger: CTTCAACCCCGTGGGTTCCAACGGATGCTTTGCCAC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAACTGAAGGCAGGCCAGTaGACCAGACATCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLKAGQ*TRHHLG
Trigger: CCCCAGGTGATGTCTGGTCAACTGGCCTGCCTTCAG...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS TCA 90 bp ATGGCGATGTCAGGAGACATTTTGGCTGTCACAGCTGGCGAGGAGTaGTGGGGTCACTGGCATCTAGTGGAGTCCAGACCAGTGATACTG +
Preference number: 5 (lower is better)
Translates to: MAMSGDILAVTAGEE*WGHWHLVESRPVIL
Trigger: CAGTATCACTGGTCTGGACTCCACTAGATGCCAGTGACCCCATCACTCCTCGCCAGCTGTGACAGCCAAAATGTCTCCTGACATCGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664306.2
ENST00000666110.2
CDS-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTACTGCCCTCTCCGGGCTaGCAGTCTCTCAGATTGGTC +
Preference number: 5 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVLPSPG*QSLRLV
Trigger: GACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCAG...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGTGGCAAAGCATCCGTaGGAACCCACGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQVAKHP*EPTGLK
Trigger: CTTCAACCCCGTGGGTTCCAACGGATGCTTTGCCAC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGGCCTGGGAGAAGGTaGAGGAGCTTGGCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGPGRR*RSLAKV
Trigger: AACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATCAGCTGCTGGAGGCTaGGCCAACAGCACTGTGCTT +
Preference number: 5 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQSAAGG*ANSTVL
Trigger: AAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTGA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGTCTTGCAGACATGCATCGTTGCAAATGCAGTCTGGTAACTGATAGATGCCTGCCCTCTCCGGGCTaGCAGTCTCTCAGATTGGTC +
Preference number: 5 (lower is better)
Translates to: WGLADMHRCKCSLVTDRCLPSPG*QSLRLV
Trigger: GACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCAG...GCATCTATCAGTTACCAGACTGCATTTGCAACGATGCATGTCTGCAAGACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGGGAGCTCCAGCCAGCTaGGCTACTGTAGGAAATATG +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQGAPAS*ATVGNM
Trigger: CATATTTCCTACAGTAGCCAAGCTGGCTGGAGCTCC...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTGCCCTCTCCGGGCTaGCAGTCTCTCAGATTGGTC +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLPSPG*QSLRLV
Trigger: GACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTCCAACTTCCCAGGGTaGTGGGTAGGGATAGAGAAA +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQSNFPG*WVGIEK
Trigger: TTTCTCTATCCCTACCCACAACCCTGGGAAGTTGGA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS TCA 90 bp ATGACTGAGTGGCTCCAAAGGAAACAGCTACATGATGGCAGACAGTaGTGGTCTCACTCCAGGGGACACAGTTTCTTCAACGGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: MTEWLQRKQLHDGRQ*WSHSRGHSFFNGLL
Trigger: AAGGAGCCCGTTGAAGAAACTGTGTCCCCTGGAGTGAGACCATCACTGTCTGCCATCATGTAGCTGTTTCCTTTGGAGCCACTCAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCTCATGATCGGAGCGTaGGCTTTTTCCTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELMIGA*AFSFKQ
Trigger: CTGCTTGAAGGAAAAAGCCAACGCTCCGATCATGAG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGCCTTCTGCACCTTTTaGTCATCTGCTTGCACTGGT +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEAFCTF*SSACTG
Trigger: ACCAGTGCAAGCAGATGACAAAAAGGTGCAGAAGGC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTCCTAGGCGATCAGTaGCGCATTTTCCCTGATTTA +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLLGDQ*RIFPDL
Trigger: TAAATCAGGGAAAATGCGCAACTGATCGCCTAGGAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGTCCAACTTCCCAGGGTaGTGGGTAGGGATAGAGAAA +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVESNFPG*WVGIEK
Trigger: TTTCTCTATCCCTACCCACAACCCTGGGAAGTTGGA...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGAGAAGGTTGAGGAGCTaGGCTAAAGTTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQRRLRS*AKVWPS
Trigger: ACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCT...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTGAAGGCAGGCCAGTaGACCAGACATCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLKAGQ*TRHHLG
Trigger: CCCCAGGTGATGTCTGGTCAACTGGCCTGCCTTCAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTATCCTGCAAGGGTGCATaGTGCACAGGGGATATTGCT +
Preference number: 5 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVSCKGA*CTGDIA
Trigger: AGCAATATCCCCTGTGCACAATGCACCCTTGCAGGA...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAGTGGCAAAGCATCCGTaGGAACCCACGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRVAKHP*EPTGLK
Trigger: CTTCAACCCCGTGGGTTCCAACGGATGCTTTGCCAC...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGCTCCTAGGCGATCAGTaGCGCATTTTCCCTGATTTA +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVELLGDQ*RIFPDL
Trigger: TAAATCAGGGAAAATGCGCAACTGATCGCCTAGGAG...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAGAAGGTTGAGGAGCTaGGCTAAAGTTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVERRLRS*AKVWPS
Trigger: ACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGGGCCTGGGAGAAGGTaGAGGAGCTTGGCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSGPGRR*RSLAKV
Trigger: AACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAGGTTTCACGCTATTGTaGCCTCAAAGCTTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVGFTLL*PQSFPR
Trigger: CCTTGGGAAGCTTTGAGGCAACAATAGCGTGAAACC...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp AGGCTTGCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGGTTGTCCATGGGGTCTaGCAGACATGCATCGTTGCA +
Preference number: 5 (lower is better)
Translates to: RLAHVLSCKLSGPSLVIWVVHGV*QTCIVA
Trigger: TGCAACGATGCATGTCTGCAAGACCCCATGGACAAC...CCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS CCA 90 bp CATAAAACCGGGGCTCGGATGCTGGAGTTAGTGGGTTTCTCTCTCTaGGATCTTTGGAAATATCAAAGAGTAAAGGTGGGTCGTGATGGG +
Preference number: 5 (lower is better)
Translates to: HKTGARMLELVGFSL*DLWKYQRVKVGRDG
Trigger: CCCATCACGACCCACCTTTACTCTTTGATATTTCCAAAGATCCCAGAGAGAGAAACCCACTAACTCCAGCATCCGAGCCCCGGTTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAGTGTCAAAGCAAGAATGAGTGCGTGCATCAGATGAAAGTTGTCCATGGGGTCGCCAACCGGTCGATATaGGGAGTCCTGATAGTTTTG +
Preference number: 5 (lower is better)
Translates to: ECQSKNECVHQMKVVHGVANRSI*GVLIVL
Trigger: CAAAACTATCAGGACTCCCAATATCGACCGGTTGGC...GACCCCATGGACAACTTTCATCTGATGCACGCACTCATTCTTGCTTTGACACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGGAGCTCCAGCCAGCTaGGCTACTGTAGGAAATATG +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSGAPAS*ATVGNM
Trigger: CATATTTCCTACAGTAGCCAAGCTGGCTGGAGCTCC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATGGAGCTCCAGCCAGCTaGGCTACTGTAGGAAATATG +
Preference number: 5 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNGAPAS*ATVGNM
Trigger: CATATTTCCTACAGTAGCCAAGCTGGCTGGAGCTCC...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGCTCATGATCGGAGCGTaGGCTTTTTCCTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: IWWHQQDRDIVRCREPSKLMIGA*AFSFKQ
Trigger: CTGCTTGAAGGAAAAAGCCAACGCTCCGATCATGAG...CTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTTGGAACCCACGGGGTaGAAGTTGGGGGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLEPTG*KLGVKK
Trigger: TTTCTTCACCCCCAACTTCAACCCCGTGGGTTCCAA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAGGCTTGAGTGATATCTaGCAACACAGAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQGLSDI*QHRTGS
Trigger: TGAACCTGTTCTGTGTTGCAAGATATCACTCAAGCC...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGGCTTGAGTGATATCTaGCAACACAGAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEGLSDI*QHRTGS
Trigger: TGAACCTGTTCTGTGTTGCAAGATATCACTCAAGCC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTTAAGCAACACTGGCTaGAGTGATATCTTGCAACAC +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLSNTG*SDILQH
Trigger: GTGTTGCAAGATATCACTCAAGCCAGTGTTGCTTAA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGTCTTGCAGACATGCATCGTTGCAAATGCAGTCTGGTAACTGATAGATGCGACGAGGTGCAACCATaGTATCTGCTTGCTTGGACT +
Preference number: 5 (lower is better)
Translates to: WGLADMHRCKCSLVTDRCDEVQP*YLLAWT
Trigger: AGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTC...GCATCTATCAGTTACCAGACTGCATTTGCAACGATGCATGTCTGCAAGACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GAGGGTGACGAGGTGCAACCATTGTATCTGCTTGCTTGGACTGTCTGCTCAACGTCGAAGTTGTCTGACTaGGTGGAAACAAATGTGACT +
Preference number: 5 (lower is better)
Translates to: EGDEVQPLYLLAWTVCSTSKLSD*VETNVT
Trigger: AGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA...CGTTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTTGCACCTCGTCACCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGACCATCTCTGGTCATTaGGTGGCATCAGCAGGACAG +
Preference number: 5 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQTISGH*VASAGQ
Trigger: CTGTCCTGCTGATGCCACCAAATGACCAGAGATGGT...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS GCA 90 bp GCTTGTGATCCTGTTGTTGGGGAACTGAGCTGTGATGGAGGAGATTaGAACTTCACTTGTTCATCCTCTGTTCATGGTTTCTGCACCAGT +
Preference number: 5 (lower is better)
Translates to: ACDPVVGELSCDGGD*NFTCSSSVHGFCTS
Trigger: ACTGGTGCAGAAACCATGAACAGAGGATGAACAAGTGAAGTTGCAATCTCCTCCATCACAGCTCAGTTCCCCAACAACAGGATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAAAGATTGCAACTTCACTaGTTCATCCTCTGTTCATGG +
Preference number: 5 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQRLQLH*FILCSW
Trigger: CCATGAACAGAGGATGAACAAGTGAAGTTGCAATCT...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CAA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATGCCAACCGGTCGATATaGGGAGTCCTGATAGTTTTG +
Preference number: 5 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNANRSI*GVLIVL
Trigger: CAAAACTATCAGGACTCCCAATATCGACCGGTTGGC...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTCATGATCGGAGCGTaGGCTTTTTCCTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLMIGA*AFSFKQ
Trigger: CTGCTTGAAGGAAAAAGCCAACGCTCCGATCATGAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATTGGAACCCACGGGGTaGAAGTTGGGGGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLEPTG*KLGVKK
Trigger: TTTCTTCACCCCCAACTTCAACCCCGTGGGTTCCAA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGCCTTCTGCACCTTTTaGTCATCTGCTTGCACTGGT +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSAFCTF*SSACTG
Trigger: ACCAGTGCAAGCAGATGACAAAAAGGTGCAGAAGGC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCAGTTCAGGAGAGATTaGCCTTGGGATTATTATTAC +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQQFRRD*PWDYYY
Trigger: GTAATAATAATCCCAAGGCAAATCTCTCCTGAACTG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGGCATCTCATTGTGGATaGGAAGCACAGAAATTTCTC +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEASHCG*EAQKFL
Trigger: GAGAAATTTCTGTGCTTCCAATCCACAATGAGATGC...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTCCAACTTCCCAGGGTaGTGGGTAGGGATAGAGAAA +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSSNFPG*WVGIEK
Trigger: TTTCTCTATCCCTACCCACAACCCTGGGAAGTTGGA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAATAGTATGCCCCTCTaGCTCCAACTTCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSNSMPL*LQLPRV
Trigger: AACCCTGGGAAGTTGGAGCAAGAGGGGCATACTATT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTGGGCCTGGGAGAAGGTaGAGGAGCTTGGCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPGPGRR*RSLAKV
Trigger: AACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCC...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTGAAGGCAGGCCAGTaGACCAGACATCACCTGGGG +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILLKAGQ*TRHHLG
Trigger: CCCCAGGTGATGTCTGGTCAACTGGCCTGCCTTCAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TGGGGAAATGCTGTCAAATCCTCCCAGCCCAATAGTATGCCCCTCTTGCTCCAATTAAGCAACACTGGCTaGAGTGATATCTTGCAACAC +
Preference number: 5 (lower is better)
Translates to: WGNAVKSSQPNSMPLLLQLSNTG*SDILQH
Trigger: GTGTTGCAAGATATCACTCAAGCCAGTGTTGCTTAA...TTGGAGCAAGAGGGGCATACTATTGGGCTGGGAGGATTTGACAGCATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGCCAGTAAGGGCGGTCTaGTGTGGGCGTGGGGACGGT +
Preference number: 5 (lower is better)
Translates to: IFMILILPTHEHEMFFHLPVRAV*CGRGDG
Trigger: ACCGTCCCCACGCCCACACAAGACCGCCCTTACTGG...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATGGCTCTTCCTCATCTTaGACATGGACGGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNGSSSS*TWTDFF
Trigger: GAAGAAGTCCGTCCATGTCAAAGATGAGGAAGAGCC...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGGCTCTTCCTCATCTTaGACATGGACGGACTTCTTC +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSGSSSS*TWTDFF
Trigger: GAAGAAGTCCGTCCATGTCAAAGATGAGGAAGAGCC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAAAAGTCATTGGTAGCTaGATGGGGATGGCACTGAAT +
Preference number: 5 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVKVIGS*MGMALN
Trigger: ATTCAGTGCCATCCCCATCAAGCTACCAATGACTTT...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACAGTCAGGCAGAAATCCTGCAAGGGTGCATTGTGCACAGGGGATATTGCTGTAATTGGTTTCACGCTATaGTTGCCTCAAAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: TVRQKSCKGALCTGDIAVIGFTL*LPQSFP
Trigger: TGGGAAGCTTTGAGGCAACAATAGCGTGAAACCAAT...TACAGCAATATCCCCTGTGCACAATGCACCCTTGCAGGATTTCTGCCTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp TCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGATTGTATCTGCTTGCTaGGACTGTCTGCTCAACGGG +
Preference number: 5 (lower is better)
Translates to: SFLVNCLDHLWSFGGISRIVSAC*DCLLNG
Trigger: CCCGTTGAGCAGACAGTCCAAGCAAGCAGATACAAT...CCTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp ATTTGGTGGCATCAGCAGGACAGAGATATAGTGAGATGCAGAGAGCCATCGAAGAGAGAGCCATCGAAGTaGTCTGACTTGGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: IWWHQQDRDIVRCREPSKREPSK*SDLVET
Trigger: TGTTTCCACCAAGTCAGACAACTTCGATGGCTCTCT...CTTCGATGGCTCTCTGCATCTCACTATATCTCTGTCCTGCTGATGCCACCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS TCA 90 bp TGGGATCTTTGGAAATATCAAAGAGTAAAGGTGGGTCGTGATGGGTaGCATAACTCCCGAAACAGAAGCACACGTGTGTGGCAAAGCATC +
Preference number: 5 (lower is better)
Translates to: WDLWKYQRVKVGRDG*HNSRNRSTRVWQSI
Trigger: GATGCTTTGCCACACACGTGTGCTTCTGTTTCGGGAGTTATGTCACCCATCACGACCCACCTTTACTCTTTGATATTTCCAAAGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTGCCCTCTCCGGGCTaGCAGTCTCTCAGATTGGTC +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLPSPG*QSLRLV
Trigger: GACCAATCTGAGAGACTGCAAGCCCGGAGAGGGCAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAAGGAGCTCCAGCCAGCTaGGCTACTGTAGGAAATATG +
Preference number: 5 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKGAPAS*ATVGNM
Trigger: CATATTTCCTACAGTAGCCAAGCTGGCTGGAGCTCC...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGTGGCAAAGCATCCGTaGGAACCCACGGGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILVAKHP*EPTGLK
Trigger: CTTCAACCCCGTGGGTTCCAACGGATGCTTTGCCAC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGCTCTCTCTGGGATCTTaGGAAATATCAAAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQLSLGS*EISKSK
Trigger: TTTACTCTTTGATATTTCCAAAGATCCCAGAGAGAG...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAAATCATGCATCTCATaGTGGATTGGAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVEKSCIS*WIGSTE
Trigger: TTCTGTGCTTCCAATCCACAATGAGATGCATGATTT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTTTGAAACTATCTCCAGCTGTGCCACTACGAGGCCCTCTCCTAGGCGATCAGTGTTCTGATACTAGTTaGGTTTTCCAAAGGAATCCA +
Preference number: 5 (lower is better)
Translates to: TLKLSPAVPLRGPLLGDQCSDTS*VFQRNP
Trigger: TGGATTCCTTTGGAAAACCAAACTAGTATCAGAACA...CTGATCGCCTAGGAGAGGGCCTCGTAGTGGCACAGCTGGAGATAGTTTCAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CAAGCTAGCTATTTCTTACTTTGCATGAGGCTTGCCCACGTCCTTTCTTGTAAAATGTCAGGAGACATTTaGGCTGTCACAGCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: QASYFLLCMRLAHVLSCKMSGDI*AVTAGE
Trigger: CTCGCCAGCTGTGACAGCCAAAATGTCTCCTGACAT...TTTACAAGAAAGGACGTGGGCAAGCCTCATGCAAAGTAAGAAATAGCTAGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp TGGATGGAAGATTACCAAGAGGAAATATCAGGGAGCATTCATCTAAACCGACCTATGTCAGGAGACATTTaGGCTGTCACAGCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: WMEDYQEEISGSIHLNRPMSGDI*AVTAGE
Trigger: CTCGCCAGCTGTGACAGCCAAAATGTCTCCTGACAT...AGGTCGGTTTAGATGAATGCTCCCTGATATTTCCTCTTGGTAATCTTCCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666110.2
CDS-3UTR CAA 90 bp GAAATATTTCAGTCTCCACTGAGCACTATGCATGGGCCACAGTCAGGCAGAAATATACCTCCTTCCCAGTaGTTTGCTTTTCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: EIFQSPLSTMHGPQSGRNIPPSQ*FAFPPT
Trigger: TGTGGGAGGAAAAGCAAACAACTGGGAAGGAGGTAT...ATTTCTGCCTGACTGTGGCCCATGCATAGTGCTCAGTGGAGACTGAAATATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp TGGGGTCTTGCAGACATGCATCGTTGCAAATGCAGTCTGGTAACTGATAGATGCAACCATTGTATCTGCTaGCTTGGACTGTCTGCTCAA +
Preference number: 5 (lower is better)
Translates to: WGLADMHRCKCSLVTDRCNHCIC*LGLSAQ
Trigger: TTGAGCAGACAGTCCAAGCAAGCAGATACAATGGTT...GCATCTATCAGTTACCAGACTGCATTTGCAACGATGCATGTCTGCAAGACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS GCA 90 bp ACTTCCGCCATGAATTTCTCCTTTGGAAGACACTTCTTCTACATGTaGTCCCTGGTCCGATGTGAAGTAGATGAGGGTATCATTAGCCAA +
Preference number: 5 (lower is better)
Translates to: TSAMNFSFGRHFFYM*SLVRCEVDEGIISQ
Trigger: TTGGCTAATGATACCCTCATCTACTTCACATCGGACCAGGGAGCACATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCATGGCGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217961.5
ENST00000658154.1
ENST00000664306.2
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp CCATCTTCCTGTCTGTATACTACAGACCTTATCCCCCTCACCCCTCCAGTTGAGAATCCAATCACATTGTaGGGGAAAGTCTTATATCTG +
Preference number: 5 (lower is better)
Translates to: PSSCLYTTDLIPLTPPVENPITL*GKVLYL
Trigger: CAGATATAAGACTTTCCCCAACAATGTGATTGGATT...CTCAACTGGAGGGGTGAGGGGGATAAGGTCTGTAGTATACAGACAGGAAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATTCATGGGCACTGTCTaGGAATTGAGCAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRFMGTV*ELSKLW
Trigger: CCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGAAGAAGGTTGAGGAGCTaGGCTAAAGTTTGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRRRLRS*AKVWPS
Trigger: ACTTGGCCAAACTTTAGCCAAGCTCCTCAACCTTCT...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTGGCTTGAGTGATATCTaGCAACACAGAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSGLSDI*QHRTGS
Trigger: TGAACCTGTTCTGTGTTGCAAGATATCACTCAAGCC...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TCGAAGTTGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGTGCAGACATGCATCGTaGCAAATGCAGTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: SKLSDLVETNVTWLGVSKCRHAS*QMQSGN
Trigger: GTTACCAGACTGCATTTGCAACGATGCATGTCTGCA...CTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATCAGCAGGGAAACAAATGTGACTaGGCTTGGAGTGTCAAAGCA +
Preference number: 5 (lower is better)
Translates to: VLSCKLSGPSLVIWWHQQGNKCD*AWSVKA
Trigger: TGCTTTGACACTCCAAGCCAAGTCACATTTGTTTCC...CTGCTGATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS GCA 90 bp GATACGTTTAGGTGCACAAATATCACATGTAACATGTGTTACAGTTaGCTAGAGTATTCAGTGCAGTCGCAGGTTGCACAGGAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: DTFRCTNITCNMCYS*LEYSVQSQVAQECS
Trigger: GCTACACTCCTGTGCAACCTGCGACTGCACTGAATACTCTAGGCAACTGTAACACATGTTACATGTGATATTTGTGCACCTAAACGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAGATTGCAACTTCACTaGTTCATCCTCTGTTCATGG +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSRLQLH*FILCSW
Trigger: CCATGAACAGAGGATGAACAAGTGAAGTTGCAATCT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTCCCTATCAGTGCTGTaGAATAACCTTGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSSLSVL*NNLDPS
Trigger: TGAAGGATCAAGGTTATTCAACAGCACTGATAGGGA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCGGAGCTCCAGCCAGCTaGGCTACTGTAGGAAATATG +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILGAPAS*ATVGNM
Trigger: CATATTTCCTACAGTAGCCAAGCTGGCTGGAGCTCC...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTGGAACCCACGGGGTaGAAGTTGGGGGTGAAGAAA +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILLEPTG*KLGVKK
Trigger: TTTCTTCACCCCCAACTTCAACCCCGTGGGTTCCAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGGGCCTGGGAGAAGGTaGAGGAGCTTGGCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQGPGRR*RSLAKV
Trigger: AACTTTAGCCAAGCTCCTCAACCTTCTCCCAGGCCC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTTAAGCAACACTGGCTaGAGTGATATCTTGCAACAC +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLSNTG*SDILQH
Trigger: GTGTTGCAAGATATCACTCAAGCCAGTGTTGCTTAA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp TCGAAGTTGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGGTCCTTTCTTGTAAATaGTCTGGACCATCTCTGGTC +
Preference number: 5 (lower is better)
Translates to: SKLSDLVETNVTWLGVSKVLSCK*SGPSLV
Trigger: GACCAGAGATGGTCCAGACAATTTACAAGAAAGGAC...CTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp GCCCACGTCCTTTCTTGTAAATTGTCTGGACCATCTCTGGTCATTTGGTGGCATTTCAGGCATCTTAATTaGTTACGGGTTTGCCTGATA +
Preference number: 5 (lower is better)
Translates to: AHVLSCKLSGPSLVIWWHFRHLN*LRVCLI
Trigger: TATCAGGCAAACCCGTAACAAATTAAGATGCCTGAA...ATGCCACCAAATGACCAGAGATGGTCCAGACAATTTACAAGAAAGGACGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp TCGAAGTTGTCTGACTTGGTGGAAACAAATGTGACTTGGCTTGGAGTGTCAAAGTCCCTATCAGTGCTGTaGAATAACCTTGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: SKLSDLVETNVTWLGVSKSLSVL*NNLDPS
Trigger: TGAAGGATCAAGGTTATTCAACAGCACTGATAGGGA...CTTTGACACTCCAAGCCAAGTCACATTTGTTTCCACCAAGTCAGACAACTTCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATCCCTATCAGTGCTGTaGAATAACCTTGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRSLSVL*NNLDPS
Trigger: TGAAGGATCAAGGTTATTCAACAGCACTGATAGGGA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCTCATGATCGGAGCGTaGGCTTTTTCCTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILLMIGA*AFSFKQ
Trigger: CTGCTTGAAGGAAAAAGCCAACGCTCCGATCATGAG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCAGTTCAGGAGAGATTaGCCTTGGGATTATTATTAC +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSQFRRD*PWDYYY
Trigger: GTAATAATAATCCCAAGGCAAATCTCTCCTGAACTG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTCCAACTTCCCAGGGTaGTGGGTAGGGATAGAGAAA +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILSNFPG*WVGIEK
Trigger: TTTCTCTATCCCTACCCACAACCCTGGGAAGTTGGA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCAATAGTATGCCCCTCTaGCTCCAACTTCCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILNSMPL*LQLPRV
Trigger: AACCCTGGGAAGTTGGAGCAAGAGGGGCATACTATT...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCACTCCTTCCCAGTTGTTaGCTTTTCCTCCCACACTCC +
Preference number: 5 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSLLPSC*LFLPHS
Trigger: GGAGTGTGGGAGGAAAAGCAAACAACTGGGAAGGAG...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGCCAACCGGTCGATATaGGGAGTCCTGATAGTTTTG +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQANRSI*GVLIVL
Trigger: CAAAACTATCAGGACTCCCAATATCGACCGGTTGGC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTCATGATCGGAGCGTaGGCTTTTTCCTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLMIGA*AFSFKQ
Trigger: CTGCTTGAAGGAAAAAGCCAACGCTCCGATCATGAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTCTCTCTCTGGGATCTTaGGAAATATCAAAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSLSLGS*EISKSK
Trigger: TTTACTCTTTGATATTTCCAAAGATCCCAGAGAGAG...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGCCTTCTGCACCTTTTaGTCATCTGCTTGCACTGGT +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQAFCTF*SSACTG
Trigger: ACCAGTGCAAGCAGATGACAAAAAGGTGCAGAAGGC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTAATCCAATCACATTGTaGGGGAAAGTCTTATATCTG +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSNPITL*GKVLYL
Trigger: CAGATATAAGACTTTCCCCAACAATGTGATTGGATT...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GAATCAGTCCAAATCCAAGGTGTAGATGGAGTTATGTTTCCCCAGTGCCACTCTTGTTCTGATACTAGTTaGGTTTTCCAAAGGAATCCA +
Preference number: 5 (lower is better)
Translates to: ESVQIQGVDGVMFPQCHSCSDTS*VFQRNP
Trigger: TGGATTCCTTTGGAAAACCAAACTAGTATCAGAACA...AGAGTGGCACTGGGGAAACATAACTCCATCTACACCTTGGATTTGGACTGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GTAGTTTCTTTCGCTGTGCAGAAGCTCTTTAGTTTAATTAGATCCCATTTGTCATGGCTTAGGATTGACTaGGCAATGCGGGCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: VVSFAVQKLFSLIRSHLSWLRID*AMRAPF
Trigger: AAAAGGAGCCCGCATTGCCAAGTCAATCCTAAGCCA...TGACAAATGGGATCTAATTAAACTAAAGAGCTTCTGCACAGCGAAAGAAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGCTCATGATCGGAGCGTaGGCTTTTTCCTTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: IFMILILPTHEHEMFFHLLMIGA*AFSFKQ
Trigger: CTGCTTGAAGGAAAAAGCCAACGCTCCGATCATGAG...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTCTCTCTGGGATCTTaGGAAATATCAAAGAGTAAA +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLSLGS*EISKSK
Trigger: TTTACTCTTTGATATTTCCAAAGATCCCAGAGAGAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGACTTTCTGTTTTAAGATaGCCTTCTGCACCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRLSVLR*PSAPFC
Trigger: ACAAAAAGGTGCAGAAGGCAATCTTAAAACAGAAAG...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATTCATGGGCACTGTCTaGGAATTGAGCAAACTCTGG +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQFMGTV*ELSKLW
Trigger: CCAGAGTTTGCTCAATTCCAAGACAGTGCCCATGAA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACTGGTGTGCCTTGTGAATGCCCCTCTATTCATTCTATTTCCATGAGTCCAAGATGTTCTGATACTAGTTaGGTTTTCCAAAGGAATCCA +
Preference number: 5 (lower is better)
Translates to: TGVPCECPSIHSISMSPRCSDTS*VFQRNP
Trigger: TGGATTCCTTTGGAAAACCAAACTAGTATCAGAACA...TCTTGGACTCATGGAAATAGAATGAATAGAGGGGCATTCACAAGGCACACCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGTCTTTTGGCTTAGGATaGACTTGGCAATGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: IFMILILPTHEHEMFFHLSFGLG*TWQCGL
Trigger: GAGCCCGCATTGCCAAGTCAATCCTAAGCCAAAAGA...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAGGCTTGAGTGATATCTaGCAACACAGAACAGGTTCA +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQGLSDI*QHRTGS
Trigger: TGAACCTGTTCTGTGTTGCAAGATATCACTCAAGCC...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTTAAGCAACACTGGCTaGAGTGATATCTTGCAACAC +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILLSNTG*SDILQH
Trigger: GTGTTGCAAGATATCACTCAAGCCAGTGTTGCTTAA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS GCA 90 bp TACCGTATATGTAGCCTACCTTACCTAGGTTTGGATACGTTTAGGTaGACAAATATCACATGTAACATGTGTTACAGTTGCCTAGAGTAT +
Preference number: 5 (lower is better)
Translates to: YRICSLPYLGLDTFR*TNITCNMCYSCLEY
Trigger: ATACTCTAGGCAACTGTAACACATGTTACATGTGATATTTGTGCACCTAAACGTATCCAAACCTAGGTAAGGTAGGCTACATATACGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAATCCCTATCAGTGCTGTaGAATAACCTTGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQSLSVL*NNLDPS
Trigger: TGAAGGATCAAGGTTATTCAACAGCACTGATAGGGA...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCCAGTTCAGGAGAGATTaGCCTTGGGATTATTATTAC +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILQFRRD*PWDYYY
Trigger: GTAATAATAATCCCAAGGCAAATCTCTCCTGAACTG...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGTCCCTATCAGTGCTGTaGAATAACCTTGATCCTTCA +
Preference number: 5 (lower is better)
Translates to: IFMILILPTHEHEMFFHLSLSVL*NNLDPS
Trigger: TGAAGGATCAAGGTTATTCAACAGCACTGATAGGGA...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAAATCATGCATCTCATaGTGGATTGGAAGCACAGAA +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQKSCIS*WIGSTE
Trigger: TTCTGTGCTTCCAATCCACAATGAGATGCATGATTT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp GATAGAGAAATTATAGCCAACTTTCAGAAAGCCCAAGTCATGGCTAACATTCTCTGTTCTGATACTAGTTaGGTTTTCCAAAGGAATCCA +
Preference number: 5 (lower is better)
Translates to: DREIIANFQKAQVMANILCSDTS*VFQRNP
Trigger: TGGATTCCTTTGGAAAACCAAACTAGTATCAGAACA...GAGAATGTTAGCCATGACTTGGGCTTTCTGAAAGTTGGCTATAATTTCTCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ATTTTCATGATATTGATTCTTCCCACCCATGAGCATGAAATGTTCTTCCATTTGGCCATTTTCATGATATaGATTCTTCCCACCCATGAG +
Preference number: 5 (lower is better)
Translates to: IFMILILPTHEHEMFFHLAIFMI*ILPTHE
Trigger: CTCATGGGTGGGAAGAATCAATATCATGAAAATGGC...CAAATGGAAGAACATTTCATGCTCATGGGTGGGAAGAATCAATATCATGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000660000.2
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAACTTTCTGTTTTAAGATaGCCTTCTGCACCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQLSVLR*PSAPFC
Trigger: ACAAAAAGGTGCAGAAGGCAATCTTAAAACAGAAAG...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS-3UTR CAA 90 bp ACAAAATCATGCATCTCATTGTGGATTGGAAGCACAGAAATTTCTCAGTCACAAAATCCAATCACATTGTaGGGGAAAGTCTTATATCTG +
Preference number: 5 (lower is better)
Translates to: TKSCISLWIGSTEISQSQNPITL*GKVLYL
Trigger: CAGATATAAGACTTTCCCCAACAATGTGATTGGATT...TTGTGACTGAGAAATTTCTGTGCTTCCAATCCACAATGAGATGCATGATTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CCA 72 bp GCCGCCGCCTCCAGTAAGGGCGGTCTTGTGTGGGCGTaGGGACGGTCGGCGCGGGGTACGTCACGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: AAASSKGGLVWA*GRSARGTSRPG
Trigger: CCCAGGCCGTGACGTACCCCGCGCCGACCGTCCCCACGCCCACACAAGACCGCCCTTACTGGAGGCGGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS CCA 72 bp TGTGCAGCCGCCGCCTCCAGTAAGGGCGGTCTTGTGTaGGCGTGGGGACGGTCGGCGCGGGGTACGTCACGG +
Preference number: 6 (lower is better)
Translates to: CAAAASSKGGLV*AWGRSARGTSR
Trigger: CCGTGACGTACCCCGCGCCGACCGTCCCCACGCCCACACAAGACCGCCCTTACTGGAGGCGGCGGCTGCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS CAA 72 bp GGTAGTGTGCAGCCGCCGCCTCCAGTAAGGGCGGTCTaGTGTGGGCGTGGGGACGGTCGGCGCGGGGTACGT +
Preference number: 6 (lower is better)
Translates to: GSVQPPPPVRAV*CGRGDGRRGVR
Trigger: ACGTACCCCGCGCCGACCGTCCCCACGCCCACACAAGACCGCCCTTACTGGAGGCGGCGGCTGCACACTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000658154.1
ENST00000660000.2
ENST00000674429.1
CDS CAA 90 bp TTCTGGGTGGGTAGTGTGCAGCCGCCGCCTCCAGTAAGGGCGGTCTaGTGTGGGCGTGGGGACGGTCGGCGCGGGGTACGTCACGGCCTG +
Preference number: 6 (lower is better)
Translates to: FWVGSVQPPPPVRAV*CGRGDGRRGVRHGL
Trigger: CAGGCCGTGACGTACCCCGCGCCGACCGTCCCCACGCCCACACAAGACCGCCCTTACTGGAGGCGGCGGCTGCACACTACCCACCCAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674429.1
CDS CCA 72 bp AACAGTGTAGAGGCACAGAAGGTCCGTCAAGTGGCCTaGCTGCCTAGGGTGACCAGCACCGGGGACATCACC +
Preference number: 6 (lower is better)
Translates to: NSVEAQKVRQVA*LPRVTSTGDIT
Trigger: GGTGATGTCCCCGGTGCTGGTCACCCTAGGCAGCCAGGCCACTTGACGGACCTTCTGTGCCTCTACACTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664306.2
CDS GCA 72 bp ATCACTGCAACCTCACTACAGCTGGGTCCCGTCAGCTaGTGGAGGCTTGGCCAACAGCACTGTGCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: ITATSLQLGPVS*WRLGQQHCAWA
Trigger: TGCCCAAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTGCAGTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS CCA 72 bp ACTGCAACCTCACTACAGCTGGGTCCCGTCAGCTGCTaGAGGCTTGGCCAACAGCACTGTGCTTGGGCAGAT +
Preference number: 6 (lower is better)
Translates to: TATSLQLGPVSC*RLGQQHCAWAD
Trigger: ATCTGCCCAAGCACAGTGCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674499.1
CDS CCA 72 bp GCCAATCCTACTCAATCACTGCAACCTCACTACAGCTaGGTCCCGTCAGCTGCTGGAGGCTTGGCCAACAGC +
Preference number: 6 (lower is better)
Translates to: ANPTQSLQPHYS*VPSAAGGLANS
Trigger: GCTGTTGGCCAAGCCTCCAGCAGCTGACGGGACCCAGCTGTAGTGAGGTTGCAGTGATTGAGTAGGATTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS CCA 72 bp TGGGCTCATCAATCTTCTGGCCAGCCTGTATCACCCTaGGCCAACGAAGGATGCCTGGAACCCGGATACCTC +
Preference number: 6 (lower is better)
Translates to: WAHQSSGQPVSP*ANEGCLEPGYL
Trigger: GAGGTATCCGGGTTCCAGGCATCCTTCGTTGGCCCAGGGTGATACAGGCTGGCCAGAAGATTGATGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217961.5
ENST00000658154.1
ENST00000660000.2
ENST00000664306.2
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CCA 72 bp ACCTGGCGGTTTTGCAGCCCTGAGGGCATCTGGCAATaGCGATGTCAGGAGACATTTTGGCTGTCACAGCTG +
Preference number: 6 (lower is better)
Translates to: TWRFCSPEGIWQ*RCQETFWLSQL
Trigger: CAGCTGTGACAGCCAAAATGTCTCCTGACATCGCCATTGCCAGATGCCCTCAGGGCTGCAAAACCGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664306.2
ENST00000666110.2
CDS TCA 72 bp TCAGGAGACATTTTGGCTGTCACAGCTGGCGAGGAGTaGTGGGGTCACTGGCATCTAGTGGAGTCCAGACCA +
Preference number: 6 (lower is better)
Translates to: SGDILAVTAGEE*WGHWHLVESRP
Trigger: TGGTCTGGACTCCACTAGATGCCAGTGACCCCATCACTCCTCGCCAGCTGTGACAGCCAAAATGTCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664306.2
ENST00000666110.2
CDS GCA 72 bp ACTCTCAGGCGTGTTTGTAGTGAAGATGGTGAGCTTTaGCACATGCGTCTGTCTGGTCCCCAGGCGCTGCTA +
Preference number: 6 (lower is better)
Translates to: TLRRVCSEDGEL*HMRLSGPQALL
Trigger: TAGCAGCGCCTGGGGACCAGACAGACGCATGTGGCAAAGCTCACCATCTTCACTACAAACACGCCTGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS TCA 72 bp AGCCAGGGCTTCCAAAGAAAGTTGTTCCATGAAAACTaGTCGGGCACCTCTGGCAGGGTCTGGGTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: SQGFQRKLFHEN*SGTSGRVWVCL
Trigger: CAGACACACCCAGACCCTGCCAGAGGTGCCCGATCAGTTTTCATGGAACAACTTTCTTTGGAAGCCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CCA 72 bp CCTGTTTTTCTCTATCACACTGGCAAGACAGGCCGGTaGAAGGACAGCACAGCTGAAGCCAGGGCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: PVFLYHTGKTGR*KDSTAEARASK
Trigger: TTTGGAAGCCCTGGCTTCAGCTGTGCTGTCCTTCCACCGGCCTGTCTTGCCAGTGTGATAGAGAAAAACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CCA 72 bp TTCTCTACCTGGCGGTTTTGCAGCCCTGAGGGCATCTaGCAATGGCGATGTCAGGAGACATTTTGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: FSTWRFCSPEGI*QWRCQETFWLS
Trigger: TGACAGCCAAAATGTCTCCTGACATCGCCATTGCCAGATGCCCTCAGGGCTGCAAAACCGCCAGGTAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000664306.2
ENST00000666110.2
CDS CAA 72 bp CCGAAACAGAAGCACACGTGTGTGGCAAAGCATCCGTaGGAACCCACGGGGTTGAAGTTGGGGGTGAAGAAA +
Preference number: 6 (lower is better)
Translates to: PKQKHTCVAKHP*EPTGLKLGVKK
Trigger: TTTCTTCACCCCCAACTTCAACCCCGTGGGTTCCAACGGATGCTTTGCCACACACGTGTGCTTCTGTTTCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CAA 90 bp AAGGGAGCTCCAGCCAGCTTGGCTACTGTAGGAAATATGTCCATGTaGCTAGTGGGCTCATCAATCTTCTGGCCAGCCTGTATCACCCTG +
Preference number: 6 (lower is better)
Translates to: KGAPASLATVGNMSM*LVGSSIFWPACITL
Trigger: CAGGGTGATACAGGCTGGCCAGAAGATTGATGAGCCCACTAGCAACATGGACATATTTCCTACAGTAGCCAAGCTGGCTGGAGCTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217961.5
ENST00000658154.1
ENST00000660000.2
ENST00000664306.2
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CAA 72 bp CCAGCCAGCTTGGCTACTGTAGGAAATATGTCCATGTaGCTAGTGGGCTCATCAATCTTCTGGCCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: PASLATVGNMSM*LVGSSIFWPAC
Trigger: ACAGGCTGGCCAGAAGATTGATGAGCCCACTAGCAACATGGACATATTTCCTACAGTAGCCAAGCTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000217961.5
ENST00000658154.1
ENST00000660000.2
ENST00000664306.2
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS TCA 72 bp TGGCTCCAAAGGAAACAGCTACATGATGGCAGACAGTaGTGGTCTCACTCCAGGGGACACAGTTTCTTCAAC +
Preference number: 6 (lower is better)
Translates to: WLQRKQLHDGRQ*WSHSRGHSFFN
Trigger: GTTGAAGAAACTGTGTCCCCTGGAGTGAGACCATCACTGTCTGCCATCATGTAGCTGTTTCCTTTGGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS TCA 72 bp AGGCATCTCCAGCTTGTGATCCTGTTGTTGGGGAACTaGGCTGTGATGGAGGAGATTGCAACTTCACTTGTT +
Preference number: 6 (lower is better)
Translates to: RHLQLVILLLGN*AVMEEIATSLV
Trigger: AACAAGTGAAGTTGCAATCTCCTCCATCACAGCTCAGTTCCCCAACAACAGGATCACAAGCTGGAGATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS TCA 72 bp GACAGAGTTGGTCCAGCAGAAACAATTGATGACCAATaGCTGGGTATTCCCCTCATTCCAGGGAAAGCAGTC +
Preference number: 6 (lower is better)
Translates to: DRVGPAETIDDQ*LGIPLIPGKAV
Trigger: GACTGCTTTCCCTGGAATGAGGGGAATACCCAGTCATTGGTCATCAATTGTTTCTGCTGGACCAACTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS CCA 72 bp GGGGCTCGGATGCTGGAGTTAGTGGGTTTCTCTCTCTaGGATCTTTGGAAATATCAAAGAGTAAAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: GARMLELVGFSL*DLWKYQRVKVG
Trigger: ACCCACCTTTACTCTTTGATATTTCCAAAGATCCCAGAGAGAGAAACCCACTAACTCCAGCATCCGAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS CCA 72 bp GGGGACACAGTTTCTTCAACGGGCTCCTTAGCTTCATaGATCCTTAGTTTTCACATTGTTCTGAGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: GDTVSSTGSLAS*ILSFHIVLRVP
Trigger: TGGCACCCTCAGAACAATGTGAAAACTAAGGATCCATGAAGCTAAGGAGCCCGTTGAAGAAACTGTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS TCA 72 bp TGGAAATATCAAAGAGTAAAGGTGGGTCGTGATGGGTaGCATAACTCCCGAAACAGAAGCACACGTGTGTGG +
Preference number: 6 (lower is better)
Translates to: WKYQRVKVGRDG*HNSRNRSTRVW
Trigger: CCACACACGTGTGCTTCTGTTTCGGGAGTTATGTCACCCATCACGACCCACCTTTACTCTTTGATATTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000217961.5
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS GCA 72 bp CCTGTTGTTGGGGAACTGAGCTGTGATGGAGGAGATTaGAACTTCACTTGTTCATCCTCTGTTCATGGTTTC +
Preference number: 6 (lower is better)
Translates to: PVVGELSCDGGD*NFTCSSSVHGF
Trigger: GAAACCATGAACAGAGGATGAACAAGTGAAGTTGCAATCTCCTCCATCACAGCTCAGTTCCCCAACAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS GCA 72 bp ATGAATTTCTCCTTTGGAAGACACTTCTTCTACATGTaGTCCCTGGTCCGATGTGAAGTAGATGAGGGTATC +
Preference number: 6 (lower is better)
Translates to: MNFSFGRHFFYM*SLVRCEVDEGI
Trigger: GATACCCTCATCTACTTCACATCGGACCAGGGAGCACATGTAGAAGAAGTGTCTTCCAAAGGAGAAATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000217961.5
ENST00000658154.1
ENST00000664306.2
ENST00000666110.2
ENST00000674429.1
ENST00000674499.1
CDS GCA 72 bp AGGTGCACAAATATCACATGTAACATGTGTTACAGTTaGCTAGAGTATTCAGTGCAGTCGCAGGTTGCACAG +
Preference number: 6 (lower is better)
Translates to: RCTNITCNMCYS*LEYSVQSQVAQ
Trigger: CTGTGCAACCTGCGACTGCACTGAATACTCTAGGCAACTGTAACACATGTTACATGTGATATTTGTGCACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658154.1
CDS GCA 72 bp TGGGAGTTTAATAAGCATATTCCCATGAGAAACCTCTaGTTTGAAGCAGGCCAATCCTACTCAATCACTGCA +
Preference number: 6 (lower is better)
Translates to: WEFNKHIPMRNL*FEAGQSYSITA
Trigger: TGCAGTGATTGAGTAGGATTGGCCTGCTTCAAAGCAGAGGTTTCTCATGGGAATATGCTTATTAAACTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000217961.5
ENST00000674499.1
CDS GCA 72 bp TGTAGCCTACCTTACCTAGGTTTGGATACGTTTAGGTaGACAAATATCACATGTAACATGTGTTACAGTTGC +
Preference number: 6 (lower is better)
Translates to: CSLPYLGLDTFR*TNITCNMCYSC
Trigger: GCAACTGTAACACATGTTACATGTGATATTTGTGCACCTAAACGTATCCAAACCTAGGTAAGGTAGGCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000658154.1