RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STRN4 (Homo sapiens)

Ensembl gene IDs: ENSG00000090372

Ensembl transcript IDs: ENST00000263280.11, ENST00000391910.7, ENST00000435164.6, ENST00000539396.5, ENST00000593979.6, ENST00000594287.6, ENST00000594357.6, ENST00000594581.5, ENST00000594704.5, ENST00000594847.6, ENST00000595357.5, ENST00000596012.2, ENST00000596016.5, ENST00000597021.6, ENST00000597063.6, ENST00000598074.1, ENST00000599231.5, ENST00000600358.7, ENST00000600615.5, ENST00000600710.1, ENST00000601631.6, ENST00000601869.1, ENST00000602223.5, ENST00000602397.5

Found 778 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGGCCTCTaGACCTCCAGCGAGGCTGGGAGTCCCCTCAGCCCCACCTGCCCG +
Preference number: 1 (lower is better)
Translates to: LAPPGSMANRQRPGL*TSSEAGSPLSPTCP
Trigger: CGGGCAGGTGGGGCTGAGGGGACTCCCAGCCTCGCTGGAGGTGCAGAGGCCTGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
3UTR CCA 90 bp GGCACAAGAAAGCCGTCTCTACCCATGGGCGACCCCATGGGGCGCTaGGAGGGCTGCCCTAGGAGTGTTGGGCAATCCCTGGCCTGGAAG +
Preference number: 1 (lower is better)
Translates to: GTRKPSLPMGDPMGR*EGCPRSVGQSLAWK
Trigger: CTTCCAGGCCAGGGATTGCCCAACACTCCTAGGGCAGCCCTCCCAGCGCCCCATGGGGTCGCCCATGGGTAGAGACGGCTTTCTTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR GCA 90 bp AAGCCGTCTCTACCCATGGGCGACCCCATGGGGCGCTGGGAGGGCTaGCCTAGGAGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTA +
Preference number: 1 (lower is better)
Translates to: KPSLPMGDPMGRWEG*PRSVGQSLAWKPWL
Trigger: TAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACTCCTAGGGCAGCCCTCCCAGCGCCCCATGGGGTCGCCCATGGGTAGAGACGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR GCA 90 bp ATATACAGGGAGTTCAGGGGGACCCGAGGCCCACTCCACCCTCCATaGCCCAGGGAGGGGCACAAGAAAGCCGTCTCTACCCATGGGCGA +
Preference number: 1 (lower is better)
Translates to: IYREFRGTRGPLHPP*PREGHKKAVSTHGR
Trigger: TCGCCCATGGGTAGAGACGGCTTTCTTGTGCCCCTCCCTGGGGCATGGAGGGTGGAGTGGGCCTCGGGTCCCCCTGAACTCCCTGTATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR GCA 90 bp GGTTCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGC +
Preference number: 1 (lower is better)
Translates to: GSTSSAAFFLAVTAF*RFQSLSVPSSEAVS
Trigger: GCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGAACC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
3UTR TCA 90 bp GTCTTCGTCCTCGCAGTTCTGCAGGAAGGGGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCT +
Preference number: 1 (lower is better)
Translates to: VFVLAVLQEGDLPQH*AAQALFAIFACRVP
Trigger: AGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR CCA 90 bp TTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTTTCTGCAGGGTCGAGGCATAGGGCC +
Preference number: 1 (lower is better)
Translates to: FGGSPSTSRRSARMP*SLTRRLSAGSRHRA
Trigger: GGCCCTATGCCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR GCA 90 bp TCCTCGTCGCTGTCTTCGTCCTCGCAGTTCTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTTGCCT +
Preference number: 1 (lower is better)
Translates to: SSSLSSSSQFCRKGI*PSTEPPKRSLPSLP
Trigger: AGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGACAGCGACGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR GCA 90 bp GCAGGAAGGGGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGATCT +
Preference number: 1 (lower is better)
Translates to: AGRGSAPALSRPSAL*HLCLPRSSLSAPRS
Trigger: AGATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR CCA 90 bp AGCGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCTCTTCCAGGTACTTCTACAAATGAG +
Preference number: 1 (lower is better)
Translates to: SGPAGNGRAWTACRG*CLCSPPLPGTSTNE
Trigger: CTCATTTGTAGAAGTACCTGGAAGAGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR GCA 90 bp GGAGTCTTGGAAAAACTGATCCCTAAAGACACCCGGCCCTGGCTGTaGTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAG +
Preference number: 1 (lower is better)
Translates to: GVLEKLIPKDTRPWL*CPLESSSDTRSGCQ
Trigger: CTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR CCA 90 bp CCTTCTGGAGTCTTGGAAAAACTGATCCCTAAAGACACCCGGCCCTaGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGC +
Preference number: 1 (lower is better)
Translates to: PSGVLEKLIPKDTRP*LCCPLESSSDTRSG
Trigger: GCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGACTCCAGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR TCA 90 bp GAGCTCAAGGGGAGAACCTGGCACCTTCTGGAGTCTTGGAAAAACTaGTCCCTAAAGACACCCGGCCCTGGCTGTGCTGCCCTCTGGAAA +
Preference number: 1 (lower is better)
Translates to: ELKGRTWHLLESWKN*SLKTPGPGCAALWK
Trigger: TTTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGACTCCAGAAGGTGCCAGGTTCTCCCCTTGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCAGAGGCCAGGCCTCTaGACCTCCAGCGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLQRPGL*TSSEAG
Trigger: CCCAGCCTCGCTGGAGGTGCAGAGGCCTGGCCTCTG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
3UTR CAA 90 bp GCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTaGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTG +
Preference number: 2 (lower is better)
Translates to: AAFFLAVTAFCRFQS*SVPSSEAVSRADWL
Trigger: CAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
3UTR-3UTR GCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCAGAGGCCAGGCCTCTaGACCTCCAGCGAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGQRPGL*TSSEAG
Trigger: CCCAGCCTCGCTGGAGGTGCAGAGGCCTGGCCTCTG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
3UTR-3UTR CCA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGG +
Preference number: 2 (lower is better)
Translates to: RRILLGRDRLLQVPELERSCGRG*GVPGGG
Trigger: CCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGA...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR TCA 90 bp TGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTCGTCCGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 2 (lower is better)
Translates to: CFLCCTLSSSSSSSLSSSAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...GGACGAAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR CCA 90 bp GTCCTCGTCGCTGTCTTCGTCCTCGCAGTTCTGCAGGAAGGGGATCTGCCCCAGGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGG +
Preference number: 2 (lower is better)
Translates to: VLVAVFVLAVLQEGDLPQGNGRA*TACRGW
Trigger: CCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC...CTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGACAGCGACGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR TCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGCCGGGGCTCAGCTCTaGGGCTCCCGGCTGCCACCC +
Preference number: 2 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRAGAQL*GSRLPP
Trigger: GGGTGGCAGCCGGGAGCCTCAGAGCTGAGCCCCGGC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACCATGGGCGACCCCATaGGGCGCTGGGAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKPWATP*GAGRAA
Trigger: GGCAGCCCTCCCAGCGCCCCATGGGGTCGCCCATGG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACACCACCAGGCTCCATaGCAAACAGACAGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEHHQAP*QTDRGQ
Trigger: CTGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
3UTR-3UTR CCA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTAGAGCCGACTGGCTGTaGTGGAAGGCCAGGGAACGA +
Preference number: 2 (lower is better)
Translates to: RRILLGRDRLLQVPELERRADWL*WKARER
Trigger: TCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCT...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
3UTR CAA 90 bp TGCAGGAAGGGGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGATC +
Preference number: 2 (lower is better)
Translates to: CRKGICPSTEPPKRS*PSLPAAFLFICSSI
Trigger: GATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR CCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGCCCAGGCTGGATGCTTaGGGAAGGCAGCCGTTGGGG +
Preference number: 2 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWPRLDA*GRQPLG
Trigger: CCCCAACGGCTGCCTTCCCCAAGCATCCAGCCTGGG...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp GGTTCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCGGGCCAGTCACTTTTaGGGGCAGCCCATCCACATC +
Preference number: 2 (lower is better)
Translates to: GSTSSAAFFLAVTAFCRFRASHF*GQPIHI
Trigger: GATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCG...GAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR CCA 90 bp CCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGAATCTTCCAACTATaGATGCAGGCATCTGCCCCG +
Preference number: 2 (lower is better)
Translates to: PTGCGGRPGNECRRSASAGIFQL*MQASAP
Trigger: CGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCC...TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
3UTR-3UTR CCA 90 bp GGTCTGGAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTAGCAGTAGCCACAGCCAACACTaGGCCCCTGTGAGCCCGGAA +
Preference number: 2 (lower is better)
Translates to: GLESSNYGCRHLPRHCSSSHSQH*APVSPE
Trigger: TTCCGGGCTCACAGGGGCCCAGTGTTGGCTGTGGCT...ACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600358.7
3UTR CAA 90 bp AAAGCATCTTTGCTGTCAGACAGATCGCAGCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCCAAGTCCCCCAGGCTCACCTCCCCG +
Preference number: 2 (lower is better)
Translates to: KASLLSDRSQLRSLS*VTVRSAKSPRLTSP
Trigger: CGGGGAGGTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGACAGCAAAGATGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR TCA 90 bp GGTTCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCGAATGCCTTGGAGTTTaGCCCGACGGCTTTCTGCAG +
Preference number: 2 (lower is better)
Translates to: GSTSSAAFFLAVTAFCRFECLGV*PDGFLQ
Trigger: CTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTC...GAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGCCCAGGCTGGATGCTTaGGGAAGGCAGCCGTTGGGG +
Preference number: 2 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEPRLDA*GRQPLG
Trigger: CCCCAACGGCTGCCTTCCCCAAGCATCCAGCCTGGG...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGAAAGACACCCGGCCCTaGCTGTGCTGCCCTCTGGAA +
Preference number: 2 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWKDTRP*LCCPLE
Trigger: TTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTT...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR TCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGGCCATCCTCGGGGGTaGTTCCTGAAAGGGGCCCAT +
Preference number: 2 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRGHPRG*FLKGAH
Trigger: ATGGGCCCCTTTCAGGAATCACCCCCGAGGATGGCC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR GCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACATCCCCAGGCTGGATaGTTGGGGAAGGCAGCCGTT +
Preference number: 2 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKHPQAG*LGKAAV
Trigger: AACGGCTGCCTTCCCCAAGCATCCAGCCTGGGGATG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGGGGAAGGCAGCCGTTaGGGAGGGATTCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEGEGSR*GGIPGE
Trigger: TTCCCCAGGAATCCCTCCCCAACGGCTGCCTTCCCC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp AGCCGCCCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 2 (lower is better)
Translates to: SRPSALCHLCLPRSSLSATACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...AGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR CCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGCCTTGGTTAGTGTCTaGAAAGCAGTGGAGAGGGCC +
Preference number: 2 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKALVSV*KAVERA
Trigger: GGCCCTCTCCACTGCTTTCCAGACACTAACCAAGGC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR TCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAGGTGGGGCGGCGCCATaGAAATCCCGTTATTTATAC +
Preference number: 2 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKGGAAP*KSRYLY
Trigger: GTATAAATAACGGGATTTTCATGGCGCCGCCCCACC...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGCCTTGGTTAGTGTCTaGAAAGCAGTGGAGAGGGCC +
Preference number: 2 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEALVSV*KAVERA
Trigger: GGCCCTCTCCACTGCTTTCCAGACACTAACCAAGGC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CCA 90 bp GTCTTCTTAAAAGCATCTTTGCTGTCAGACAGATCGCAGCTGAGGTCGTTGTCGAAAGGAACCTTCATGTaGCCGGGGCTGGGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: VFLKASLLSDRSQLRSLSKGTFM*PGLGCA
Trigger: GGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTT...CGACAACGACCTCAGCTGCGATCTGTCTGACAGCAAAGATGCTTTTAAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR TCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGACAGGGAGGAGACTaGCTGAGACCATCACACAGT +
Preference number: 2 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQERQGGD*LRPSHS
Trigger: ACTGTGTGATGGTCTCAGTCAGTCTCCTCCCTGTCT...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR TCA 90 bp CAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCCAGGTACTTCTACAAATaGGCACTTATTACTTCTGCA +
Preference number: 2 (lower is better)
Translates to: QQGTDALGPHVEDGVCVARYFYK*ALITSA
Trigger: TGCAGAAGTAATAAGTGCTCATTTGTAGAAGTACCT...GGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR CCA 90 bp CGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTT +
Preference number: 2 (lower is better)
Translates to: RAQGELGVPRLLKSIFAVSARMP*SLTRRL
Trigger: AAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGA...GACAGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR CCA 72 bp AGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTaGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCG +
Preference number: 3 (lower is better)
Translates to: SVPSSEAVSRAD*LWWKARERMPS
Trigger: CGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
3UTR GCA 72 bp GGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTaGCCTCACCTCAGCCCCACCTGCCCGGCCCTACAC +
Preference number: 3 (lower is better)
Translates to: GMGVQRLRMRGF*PHLSPTCPALH
Trigger: GTGTAGGGCCGGGCAGGTGGGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
3UTR CCA 72 bp GCTCCAGCGAGCGGCCCAGCAGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGGTGTCTGTGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: APASGPAGNGRA*TACRGWCLCSP
Trigger: TGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGCTCGCTGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR CAA 90 bp CCCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGGGCTCCACTGCCCCGTaGAGCTCCAGCGAGCGGCCC +
Preference number: 3 (lower is better)
Translates to: PKRSLPSLPAAFLFICSSGSTAP*SSSERP
Trigger: GGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCC...CGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR CCA 72 bp GAGGAGAAGCCAAAGGAACCTTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGGCCAGTCACTTTTGGG +
Preference number: 3 (lower is better)
Translates to: EEKPKEPSCGRG*GVPGGGPVTFG
Trigger: CCCAAAAGTGACTGGCCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTTGGCTTCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR CAA 90 bp GTCCTCGTCGCTGTCTTCGTCCTCGCAGTTCTGCAGGAAGGGGATCTGCCCCAGAGGGAACGGACGCGCTaGGACCGCATGTCGAGGATG +
Preference number: 3 (lower is better)
Translates to: VLVAVFVLAVLQEGDLPQRERTR*DRMSRM
Trigger: CATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCT...CTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGACAGCGACGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR-3UTR CAA 90 bp CTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGAGAGCGCAGGGTGAACTaGGGGTTCCACGTCTTCTTA +
Preference number: 3 (lower is better)
Translates to: LQVPELERAVLGGGEQSRERRVN*GFHVFL
Trigger: TAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTC...TCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
3UTR GCA 72 bp TCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAG +
Preference number: 3 (lower is better)
Translates to: SSAAFFLAVTAF*RFQSLSVPSSE
Trigger: CTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
3UTR GCA 72 bp CTGTCTTCGTCCTCGCAGTTCTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCCAAGCGCTCTTTGCCA +
Preference number: 3 (lower is better)
Translates to: LSSSSQFCRKGI*PSTEPPKRSLP
Trigger: TGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR TCA 72 bp CCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTaGCCCGACGGCTTTCTGCAGGGTCGAGGCATAGGG +
Preference number: 3 (lower is better)
Translates to: PHPAGQPECLGV*PDGFLQGRGIG
Trigger: CCCTATGCCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR CCA 72 bp AGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTTTCTGCAGGGTCGAGG +
Preference number: 3 (lower is better)
Translates to: SPSTSRRSARMP*SLTRRLSAGSR
Trigger: CCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR CAA 90 bp ACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGAGAATGCCTTGGAGTTaGACCCGACGGCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: TGCGGRPGNECRRSASAGRMPWS*TRRLSA
Trigger: TGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCT...CCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR-3UTR CAA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTTCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGA +
Preference number: 3 (lower is better)
Translates to: RRILLGRDRLLQVPELERSQLRS*SLVTVR
Trigger: TCTCACCGTCACCAACGACAACGACCTCAGCTGCGA...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR TCA 72 bp CTCCCCGCCCCCGATAGTGTCCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACCTTCATGTGGCCGGGG +
Preference number: 3 (lower is better)
Translates to: LPAPDSVHDEDV*GEAKGTFMWPG
Trigger: CCCCGGCCACATGAAGGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATGGACACTATCGGGGGCGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR CCA 72 bp CCTAGGAGTGTTGGGCAATCCCTGGCCTGGAAGCCTTaGTTAGTGTCTGGAAAGCAGTGGAGAGGGCCGGAG +
Preference number: 3 (lower is better)
Translates to: PRSVGQSLAWKP*LVSGKQWRGPE
Trigger: CTCCGGCCCTCTCCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACTCCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR GCA 72 bp CCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTATCTGCTCCTCGATCT +
Preference number: 3 (lower is better)
Translates to: PALSRPSALCHL*LPRSSLSAPRS
Trigger: AGATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR CCA 72 bp GAGGGCTGCCCTAGGAGTGTTGGGCAATCCCTGGCCTaGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: EGCPRSVGQSLA*KPWLVSGKQWR
Trigger: TCTCCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACTCCTAGGGCAGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CAA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGCTGCCCTAGGAGTGTaGGGCAATCCCTGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEAALGV*GNPWPG
Trigger: TCCAGGCCAGGGATTGCCCAACACTCCTAGGGCAGC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR GCA 72 bp GAAAAACTGATCCCTAAAGACACCCGGCCCTGGCTGTaGTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGC +
Preference number: 3 (lower is better)
Translates to: EKLIPKDTRPWL*CPLESSSDTRS
Trigger: GCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTTAGGGATCAGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR CCA 72 bp GTCTTGGAAAAACTGATCCCTAAAGACACCCGGCCCTaGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACC +
Preference number: 3 (lower is better)
Translates to: VLEKLIPKDTRP*LCCPLESSSDT
Trigger: GGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR GCA 72 bp GAGGTCTGGAATCTTCCAACTATGGATGCAGGCATCTaGCCCGCCACTGTAGCAGTATTCACTGTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: EVWNLPTMDAGI*PATVAVFTVAA
Trigger: GGCAGCAACAGTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600358.7
3UTR TCA 72 bp CCATCACACAGTGATAATGCGGGTGGGGCGGCGCCATaGAAATCCCGTTATTTATACAGATATACAGGGAGT +
Preference number: 3 (lower is better)
Translates to: PSHSDNAGGAAP*KSRYLYRYTGS
Trigger: ACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCCCACCCGCATTATCACTGTGTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR-3UTR CAA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGGCACCTTCTGGAGTCTaGGAAAAACTGATCCCTAAA +
Preference number: 3 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGAPSGV*EKLIPK
Trigger: TTTAGGGATCAGTTTTTCCAAGACTCCAGAAGGTGC...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGGCAGGCCGGGCTGCTaGTGCTGGGGTCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQGRPGC*CWGPRC
Trigger: GCATCTGGGACCCCAGCAGCAGCAGCCCGGCCTGCC...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCACTCGCTCCTCCATCATaGAGGCCCCGGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARALAPPS*RPRGRP
Trigger: AGGCCGGCCCCGGGGCCTCCATGATGGAGGAGCGAG...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCACACACGGCGTCCCCGTaGCCCTCCAGGACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAHTASP*PSRTWL
Trigger: GAGCCACGTCCTGGAGGGCCACGGGGACGCCGTGTG...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCACGCCAGCACTGGCAATaGGGGCCTTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARARQHWQ*GPCWGG
Trigger: GCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGGCG...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGAGGCCGGGCTGCTGCTaGTGGGGTCCCAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQRPGCC*WGPRCG
Trigger: TCCGCATCTGGGACCCCAGCAGCAGCAGCCCGGCCT...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR GCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCACAGAGGCCAGGCCTCTaGACCTCCAGCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAQRPGL*TSSEAG
Trigger: CCCAGCCTCGCTGGAGGTGCAGAGGCCTGGCCTCTG...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCAGGAGGCCAGGCGCTaGGAGGTGGGACTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQQEARR*EVGLKA
Trigger: GGCCTTCAGTCCCACCTCCCAGCGCCTGGCCTCCTG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCAGGTTCCAGAGCTTaGGCGTGCCGTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAAGSRA*ACRPRR
Trigger: CCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGC...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGAAGGGGCCGCTTTCTaGCCCCCTCCTCCCACTTCG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQEGAAF*PPPPTS
Trigger: CGAAGTGGGAGGAGGGGGGCAGAAAGCGGCCCCTTC...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTGGCCCTCCAGGACGTaGCTCAGCACGCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQWPSRT*LSTLGS
Trigger: CGACCCAAGCGTGCTGAGCCACGTCCTGGAGGGCCA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCGTGCTCGCTGGCTGTaGGGAAGGTGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQRARWL*GRCRGR
Trigger: CCTGCCTCTGCACCTTCCCCACAGCCAGCGAGCACG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGACCCCGTGCTCGCTaGCTGTGGGGAAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAGPRAR*LWGRCR
Trigger: TCTGCACCTTCCCCACAGCCAGCGAGCACGGGGTCC...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGGACCCCGTGCTCGCTaGCTGTGGGGAAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQGPRAR*LWGRCR
Trigger: TCTGCACCTTCCCCACAGCCAGCGAGCACGGGGTCC...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTGCTGGGGTCCCAGATaGGGACGGTGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQCWGPR*GRCHQQ
Trigger: CTGCTGATGGCACCGTCCGCATCTGGGACCCCAGCA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR TCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAAGTGCGAGCGCAGGGTaGACTTGGGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARASASAG*TWGSTS
Trigger: AGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACT...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp ACCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCACCACGGCTAGGCAGGTaGCTGCGTCCAGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: TSAPPARPYTPASVAARAPRLGR*LRPGVQ
Trigger: TTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGG...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTCTTGCGGTGGGCCGTaGTCTCCTGCACGCACGTTT +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQSCGGP*SPARTF
Trigger: AAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR TCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTGGCCCCATCCTCTCTaGTTGCCGGCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQWPHPL*LPARLV
Trigger: AACCAACCTGGCCGGCAATCAGAGAGGATGGGGCCA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATACTGTCGGAGAAGCTaGCGCCCCTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAYCRRS*RPSFHT
Trigger: GGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATTCACTCGGCTCCACTaGCCCGTTGAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAFTRLH*PVELQR
Trigger: TCGCTGGAGCTCAACGGGGCAGTGGAGCCGAGTGAA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATCGTCCTCGCAGTTCTaGAGGAAGGGGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARASSSQF*RKGICP
Trigger: GGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAGDGEI*QVPQAH
Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCATCCCCAGGCTGGATaGTTGGGGAAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQHPQAG*LGKAAV
Trigger: AACGGCTGCCTTCCCCAAGCATCCAGCCTGGGGATG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGAGAATGCGGGGTTTCTaGCCTCACCTCAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQRMRGF*PHLSPT
Trigger: GGTGGGGCTGAGGTGAGGGCAGAAACCCCGCATTCT...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTGGCAGGCAACAGCGTaGATGGCCTCCTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQWQATA*MASSCF
Trigger: GAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR TCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGACTCACCACTTGGTTaGTCTGGGTTGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQDSPLG*SGLDRC
Trigger: GCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTC...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQRCFLC*TLSSSS
Trigger: CGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAACCACTTGGTTGATCTaGGTTGGACCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARATTWLI*VGPLLP
Trigger: GGGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGT...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCCAGGTGTGCAACCATaGAGTGCACCGGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQPGVQP*SAPAYL
Trigger: CAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR CCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCACCACCAGGCTCCATaGCAAACAGACAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQHHQAP*QTDRGQ
Trigger: CTGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGAACACTGGGCCCCTGTaGGCCCGGAAAGCATGTATA +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQNTGPL*ARKACI
Trigger: TATACATGCTTTCCGGGCTCACAGGGGCCCAGTGTT...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGATGGATGCAGGCATCTaGCCCGCCACTGTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQMDAGI*PATVAV
Trigger: TACTGCTACAGTGGCGGGGCAGATGCCTGCATCCAT...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTCTTCCAACTATGGATaGAGGCATCTGCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQSSNYG*RHLPRH
Trigger: GTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGGCAGGCCGGGCTGCTaGTGCTGGGGTCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAGRPGC*CWGPRC
Trigger: GCATCTGGGACCCCAGCAGCAGCAGCCCGGCCTGCC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp ACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGGCAGGCCGGGCTGCTaGTGCTGGGGTCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: TPLTGLRGSAHLAVLGMGGRPGC*CWGPRC
Trigger: GCATCTGGGACCCCAGCAGCAGCAGCCCGGCCTGCC...GCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGGCCTGGTGGAGCCCTaGGGGCCCCTTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAGLVEP*GPLHSA
Trigger: AGCCGAGTGAAGGGGCCCCCAGGGCTCCACCAGGCC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCGGCCTGGTGGAGCCCTaGGGGCCCCTTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLGLVEP*GPLHSA
Trigger: AGCCGAGTGAAGGGGCCCCCAGGGCTCCACCAGGCC...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEASCGRG*GVPGGG
Trigger: CCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGA...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCCACACGGCGTCCCCGTaGCCCTCCAGGACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAHTASP*PSRTWL
Trigger: GAGCCACGTCCTGGAGGGCCACGGGGACGCCGTGTG...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCACACGGCGTCCCCGTaGCCCTCCAGGACGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLHTASP*PSRTWL
Trigger: GAGCCACGTCCTGGAGGGCCACGGGGACGCCGTGTG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCGCTGGTGAAGGCCACTaGGGTGGGGACCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLAGEGH*GGDPVL
Trigger: GAGCACGGGGTCCCCACCTCAGTGGCCTTCACCAGC...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACCCACCACTGAGCCCTaGAGGGCCTGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LQVPELERAVLGGGEQSRPTTEP*RAWWSP
Trigger: AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGG...TCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAGGCCGGGCTGCTGCTaGTGGGGTCCCAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLRPGCC*WGPRCG
Trigger: TCCGCATCTGGGACCCCAGCAGCAGCAGCCCGGCCT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp ACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCTCTGGGTTGGACCGCTaGTGCCCCGGGACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TPLTGLRGSAHLAVLGMGSGLDR*CPGTPA
Trigger: CGCTGGAGTCCCGGGGCAGCAGCGGTCCAACCCAGA...GCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp ACCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATGTGCAACCATGGAGTaGACCGGCTTACCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: TSAPPARPYTPASVAARACATME*TGLPVR
Trigger: TCGGACAGGTAAGCCGGTGCACTCCATGGTTGCACA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp CGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLAVVEGQGTNAVVVRAQSCGRG*GVPGGG
Trigger: CCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGA...CTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp GAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EPTGCGGRPGNECRRSASSCGRG*GVPGGG
Trigger: CCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGA...GCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp ACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGCGTCCTCGGAGGCGGTaGGCAGAGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TGCGGRPGNECRRSASAGRPRRR*AEPTGC
Trigger: ACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACG...CCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp CGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGCGTCCTCGGAGGCGGTaGGCAGAGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RLAVVEGQGTNAVVVRAQRPRRR*AEPTGC
Trigger: ACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACG...CTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGCAGGTTCCAGAGCTTaGGCGTGCCGTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAAGSRA*ACRPRR
Trigger: CCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAAGAGGCTGGTTTGGATaGCTCACCACTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARARGWFG*LTTWLI
Trigger: GATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCT...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGCGCCAGCACTGGCAATaGGGGCCTTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DWTAGLSTPGSTRHGRAERQHWQ*GPCWGG
Trigger: GCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGGCG...CTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGAGTCTTGGAAAAACTaGTCCCTAAAGACACCCGGC +
Preference number: 4 (lower is better)
Translates to: PSAPPARPYTPASVAARAESWKN*SLKTPG
Trigger: GCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGACTC...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGAGGCGGGCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCCACTCTGTGGGGCTGTaGAGCTCTGGCCCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GGGPVTFGGSPSTSRRSAHSVGL*SSGPSS
Trigger: TGAGCTGGGGCCAGAGCTTCACAGCCCCACAGAGTG...GGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp CGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: RDRLLQVPELERAVLGGGCRKGI*PSTEPP
Trigger: GGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA...ACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp CTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGAGGCTCCCATCCACAGTaGACCGCCGAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LQVPELERAVLGGGEQSRGSHPQ*TAEGLE
Trigger: CTCCAGACCCTCGGCGGTGCACTGTGGATGGGAGCC...TCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCACCCGGCCCTGGCTGTaGTGCCCTCTGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEATRPWL*CPLESS
Trigger: GCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGT...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCCCACCTGGCCTGGTGGAGCCCTaGGGGCCCCTTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: GNGRAWTACRGWCLCSPPGLVEP*GPLHSA
Trigger: AGCCGAGTGAAGGGGCCCCCAGGGCTCCACCAGGCC...AGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGSCGRG*GVPGGG
Trigger: CCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGA...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCCCCAGGCTGGATGCTTaGGGAAGGCAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAPRLDA*GRQPLG
Trigger: CCCCAACGGCTGCCTTCCCCAAGCATCCAGCCTGGG...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGAGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LQVPELERAVLGGGEQSRGCSPG*PIPRGH
Trigger: ATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCC...TCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp GTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VTAFCRFQSLSVPSSEAVDLPQH*AAQALF
Trigger: AAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATC...CACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCGCTGGTGAAGGCCACTaGGGTGGGGACCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGAGEGH*GGDPVL
Trigger: GAGCACGGGGTCCCCACCTCAGTGGCCTTCACCAGC...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACCCGGGACTCCAGCGTaGGGAGGGCACTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEPGTPA*GGHCQP
Trigger: AGGTTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCCCGGGACTCCAGCGTaGGGAGGGCACTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPPGTPA*GGHCQP
Trigger: AGGTTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGG...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCCCGGGACTCCAGCGTaGGGAGGGCACTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGPGTPA*GGHCQP
Trigger: AGGTTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCGCCAGCACTGGCAATaGGGGCCTTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPRQHWQ*GPCWGG
Trigger: GCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGGCG...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp AGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCCTCACAGGACGCCCCTaGCTGGACTGCGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RHGRAETQNAGFLPSPQPLTGRP*LDCGAQ
Trigger: CTGAGCCCCGCAGTCCAGTCAGGGGCGTCCTGTGAG...GGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp CCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGTGCTGGGGTCCCAGATaGGGACGGTGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLTGLRGSAHLAVLGMGVCWGPR*GRCHQQ
Trigger: CTGCTGATGGCACCGTCCGCATCTGGGACCCCAGCA...CACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGTCTGGGTTGGACCGCTaGTGCCCCGGGACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPSGLDR*CPGTPA
Trigger: CGCTGGAGTCCCGGGGCAGCAGCGGTCCAACCCAGA...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTCTGGGTTGGACCGCTaGTGCCCCGGGACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPSGLDR*CPGTPA
Trigger: CGCTGGAGTCCCGGGGCAGCAGCGGTCCAACCCAGA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCCAGAGGCCAGGCCTCTaGACCTCCAGCGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPQRPGL*TSSEAG
Trigger: CCCAGCCTCGCTGGAGGTGCAGAGGCCTGGCCTCTG...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCTCTGAGGCTCCCGGCTaGCACCCTTTCTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLSEAPG*HPFSQH
Trigger: GTGCTGGGAGAAAGGGTGGCAGCCGGGAGCCTCAGA...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTGGCCTGGTGGAGCCCTaGGGGCCCCTTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVGLVEP*GPLHSA
Trigger: AGCCGAGTGAAGGGGCCCCCAGGGCTCCACCAGGCC...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGTGAGCAGAGCCGACTaGCTGTGGTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAVSRAD*LWWKAR
Trigger: CCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCAC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGTGAGCAGAGCCGACTaGCTGTGGTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VPELERAVLGGGEQSRLAVSRAD*LWWKAR
Trigger: CCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCAC...AGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAAC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp GGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCCCGTGCTCGCTGGCTGTaGGGAAGGTGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GMGVQRLRMRGFCPHLSPRARWL*GRCRGR
Trigger: CCTGCCTCTGCACCTTCCCCACAGCCAGCGAGCACG...GGGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGATGCCCCTGTCGTCGTaGGCGGTGATGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DAPDWTAGLSTPGSTRHGMPLSS*AVMVRG
Trigger: GCCTCTCACCATCACCGCCCACGACGACAGGGGCAT...CCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCTCAGGAATGCGCCGTTaGGGTCCACGGCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLSGMRR*GPRLGR
Trigger: CCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGA...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCGGGGAAGGCAGCCGTTaGGGAGGGATTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLGEGSR*GGIPGE
Trigger: TTCCCCAGGAATCCCTCCCCAACGGCTGCCTTCCCC...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATGGGCGACCCCATaGGGCGCTGGGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRPWATP*GAGRAA
Trigger: GGCAGCCCTCCCAGCGCCCCATGGGGTCGCCCATGG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGAGGCGGGCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAAAGGAACCTTCATGTaGCCGGGGCTGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GGGPVTFGGSPSTSRRSAKGTFM*PGLGCA
Trigger: GGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTT...GGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp CGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGCCCCCTGCCACTCTGTaGGGCTGTGAAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: RLAVVEGQGTNAVVVRAQPPATL*GCEALA
Trigger: GGCCAGAGCTTCACAGCCCCACAGAGTGGCAGGGGG...CTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACGTCCTCGGAGGCGGTaGGCAGAGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPRPRRR*AEPTGC
Trigger: ACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGCAGGTTCCAGAGCTTaGGCGTGCCGTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPAGSRA*ACRPRR
Trigger: CCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGCTGGTGAAGGCCACTaGGGTGGGGACCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPAGEGH*GGDPVL
Trigger: GAGCACGGGGTCCCCACCTCAGTGGCCTTCACCAGC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACAGGCTCGGTGCTGGTaGAGGCCACTGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEQARCW*RPLRWG
Trigger: TCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCTG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp ACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGCAGGCTCGGTGCTGGTaGAGGCCACTGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TAGLSTPGSTRHGRAETQQARCW*RPLRWG
Trigger: TCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCTG...CTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGCCGGGGCTCAGCTCTaGGGCTCCCGGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWAGAQL*GSRLPP
Trigger: GGGTGGCAGCCGGGAGCCTCAGAGCTGAGCCCCGGC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGCCGGGGCTCAGCTCTaGGGCTCCCGGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKAGAQL*GSRLPP
Trigger: GGGTGGCAGCCGGGAGCCTCAGAGCTGAGCCCCGGC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp TGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCCAGGGCTCCCCCAGTaGTTCTCACAGGACGCCCCT +
Preference number: 4 (lower is better)
Translates to: WTAGLSTPGSTRHGRAETPGLPQ*FSQDAP
Trigger: AGGGGCGTCCTGTGAGAATCACTGGGGGAGCCCTGG...AGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp CTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGATACTGTCGGAGAAGCTaGCGCCCCTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: LQVPELERAVLGGGEQSRYCRRS*RPSFHT
Trigger: GGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTA...TCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCTTCACTCGGCTCCACTaGCCCGTTGAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLFTRLH*PVELQR
Trigger: TCGCTGGAGCTCAACGGGGCAGTGGAGCCGAGTGAA...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACCCACCACTGAGCCCTaGAGGGCCTGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPPTTEP*RAWWSP
Trigger: AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLRPSAL*HLCLPR
Trigger: ACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPCRKGI*PSTEPP
Trigger: GGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TCGATCTGTTTCACCAGCAGCGACTCCCCACCACTGAGCCCTGCAGGGCCTGGTTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SICFTSSDSPPLSPAGPGCRKGI*PSTEPP
Trigger: GGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA...ACCAGGCCCTGCAGGGCTCAGTGGTGGGGAGTCGCTGCTGGTGAAACAGATCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp CGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTTCGTCCTCGCAGTTCTaGAGGAAGGGGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RDRLLQVPELERAVLGGGSSSQF*RKGICP
Trigger: GGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGA...ACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GGAGGCGGGCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCCGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: GGGPVTFGGSPSTSRRSARCFLC*TLSSSS
Trigger: CGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG...GGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGCCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCGGCTCCCATCCACAGTaGACCGCCGAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ASHFWGQPIHIPQVSQNAGSHPQ*TAEGLE
Trigger: CTCCAGACCCTCGGCGGTGCACTGTGGATGGGAGCC...GGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGGCTCCCATCCACAGTaGACCGCCGAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEGSHPQ*TAEGLE
Trigger: CTCCAGACCCTCGGCGGTGCACTGTGGATGGGAGCC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAGGCCAGGGAACGAATaGCGTCGTAGTGCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLRPGNE*RRSASA
Trigger: TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RDRLLQVPELERAVLGGGAVTAF*RFQSLS
Trigger: GCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGC...ACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLAVTAF*RFQSLS
Trigger: GCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGC...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCTGTCCAGGAAGCGGATaGCCCTGTCGTCGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHGRAETQNAGFLPSPQPCPGSG*PCRRGR
Trigger: CCGCCCACGACGACAGGGGCATCCGCTTCCTGGACA...GGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp CCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGGACTGCGTCCAGGTGTaGAACCATGGAGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: PLTGLRGSAHLAVLGMGVDCVQV*NHGVHR
Trigger: CCGGTGCACTCCATGGTTGCACACCTGGACGCAGTC...CACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp GGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTGGATGTCGGAGAAGCTaGCGCCCCTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: GPAGNGRAWTACRGWCLCGCRRS*RPSFHT
Trigger: GGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACATCC...ACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CCA 90 bp GTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGCGGGCACCAGAGCCTTaGATGGGAGCTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: VTAFCRFQSLSVPSSEAVRAPEP*MGASHA
Trigger: AGCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCG...CACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp AGAAGCCAAAGGAACCTTCATGTGGCCGGGGCTGGGGTGTGCCAGGAGGCGGGCCGGGCCAGTCACTTTTaGGGGCAGCCCATCCACATC +
Preference number: 4 (lower is better)
Translates to: RSQRNLHVAGAGVCQEAGRASHF*GQPIHI
Trigger: GATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCG...GCCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTTGGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp ACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCCGGGCCAGTCACTTTTaGGGGCAGCCCATCCACATC +
Preference number: 4 (lower is better)
Translates to: TAFCRFQSLSVPSSEAVSRASHF*GQPIHI
Trigger: GATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCG...GCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCGCCGACTGGCTGTGGTaGAAGGCCAGGGAACGAATG +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLADWLW*KARERM
Trigger: CATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGC...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAGAGCCGACTGGCTGTaGTGGAAGGCCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLRADWL*WKARER
Trigger: TCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGTGAGCAGAGCCGACTaGCTGTGGTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: AFCRFQSLSVPSSEAVSRVSRAD*LWWKAR
Trigger: CCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCAC...TCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCCGTGCTCGCTGGCTGTaGGGAAGGTGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPRARWL*GRCRGR
Trigger: CCTGCCTCTGCACCTTCCCCACAGCCAGCGAGCACG...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCGTGCTCGCTGGCTGTaGGGAAGGTGCAGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGRARWL*GRCRGR
Trigger: CCTGCCTCTGCACCTTCCCCACAGCCAGCGAGCACG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGGGACCCCGTGCTCGCTaGCTGTGGGGAAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: TAGLSTPGSTRHGRAETQGPRAR*LWGRCR
Trigger: TCTGCACCTTCCCCACAGCCAGCGAGCACGGGGTCC...CTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp AGGACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGTCAGGAATGCGCCGTTaGGGTCCACGGCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RTPLTGLRGSAHLAVLGMSGMRR*GPRLGR
Trigger: CCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGA...CATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCTGGCAGGCAACAGCGTaGATGGCCTCCTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAWQATA*MASSCF
Trigger: GAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCA...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCCCAGGCTGGATGCTTaGGGAAGGCAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPPRLDA*GRQPLG
Trigger: CCCCAACGGCTGCCTTCCCCAAGCATCCAGCCTGGG...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCAAAGACACCCGGCCCTaGCTGTGCTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAKDTRP*LCCPLE
Trigger: TTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTT...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAAAGGAACCTTCATGTaGCCGGGGCTGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLKGTFM*PGLGCA
Trigger: GGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGTGGGGGCGAGGTGGTaGGGAGCAGCCTTCCCCTCG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRVGARW*GAAFPS
Trigger: CGAGGGGAAGGCTGCTCCCCACCACCTCGCCCCCAC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539396.5
CDS-3UTR TCA 90 bp GTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTCATACTCTAGCATCTTaGTCCGCCGCACCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: VPELERAVLGGGEQSRLAHTLAS*SAAPGP
Trigger: CGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATG...AGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGGCSPG*PIPRGH
Trigger: ATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCC...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TCGATCTGTTTCACCAGCAGCGACTCCCCACCACTGAGCCCTGCAGGGCCTGGTGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SICFTSSDSPPLSPAGPGGCSPG*PIPRGH
Trigger: ATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCC...ACCAGGCCCTGCAGGGCTCAGTGGTGGGGAGTCGCTGCTGGTGAAACAGATCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEDLPQH*AAQALF
Trigger: AAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TCGATCTGTTTCACCAGCAGCGACTCCCCACCACTGAGCCCTGCAGGGCCTGGTGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SICFTSSDSPPLSPAGPGDLPQH*AAQALF
Trigger: AAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATC...ACCAGGCCCTGCAGGGCTCAGTGGTGGGGAGTCGCTGCTGGTGAAACAGATCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR TCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCCATTCTTCTTGGCCGTaGCCGCCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAHSSWP*PPSAGS
Trigger: GGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATG...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATTCTTCTTGGCCGTaGCCGCCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLHSSWP*PPSAGS
Trigger: GGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCGCTGGTGAAGGCCACTaGGGTGGGGACCCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: VLGMGVQRLRMRGFCPHLAGEGH*GGDPVL
Trigger: GAGCACGGGGTCCCCACCTCAGTGGCCTTCACCAGC...GAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp GTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCCCCGGGACTCCAGCGTaGGGAGGGCACTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: VLGMGVQRLRMRGFCPHLPGTPA*GGHCQP
Trigger: AGGTTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGG...GAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp GACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGGACTCACCACTTGGTTaGTCTGGGTTGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: DAPDWTAGLSTPGSTRHGDSPLG*SGLDRC
Trigger: GCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTC...CCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACCACGGCTAGGCAGGTaGCTGCGTCCAGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEPRLGR*LRPGVQ
Trigger: TTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCGCCAGCACTGGCAATaGGGGCCTTGCTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRRQHWQ*GPCWGG
Trigger: GCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGGCG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCGGCCATCCTCGGGGGTaGTTCCTGAAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGGHPRG*FLKGAH
Trigger: ATGGGCCCCTTTCAGGAATCACCCCCGAGGATGGCC...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGGTCAGCCAGAATGCCTTGGAGTTTGACCCGACGGCTTTCTGCAGGGTCGAGGCCCACCACTGAGCCCTaGAGGGCCTGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RSARMPWSLTRRLSAGSRPTTEP*RAWWSP
Trigger: AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGG...CCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp CCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCACGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: PTGCGGRPGNECRRSASARPSAL*HLCLPR
Trigger: ACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCG...TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTGACCCGATGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GSPSTSRRSARMPWSLTRCRKGI*PSTEPP
Trigger: GGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA...TCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp TTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGGGGAGCTTCACACGCTaGTTCTTGTGCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: FQSLSVPSSEAVSRADWLGSFTR*FLCCTL
Trigger: CAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCC...CAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp CCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PTGCGGRPGNECRRSASAGDGEI*QVPQAH
Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AFCRFQSLSVPSSEAVSRAVTAF*RFQSLS
Trigger: GCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGC...TCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp CACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCAGGCCGGGCTGCTGCTaGTGGGGTCCCAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: HLAVLGMGVQRLRMRGFCRPGCC*WGPRCG
Trigger: TCCGCATCTGGGACCCCAGCAGCAGCAGCCCGGCCT...GCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATGTCCAGGAAGCGGATaGCCCTGTCGTCGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPCPGSG*PCRRGR
Trigger: CCGCCCACGACGACAGGGGCATCCGCTTCCTGGACA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCTGGATGGCCTCCTCGTaGTTCTTGCGGTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGWMASS*FLRWAV
Trigger: CACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCA...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGTGGATGGCCTCCTCGTaGTTCTTGCGGTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPWMASS*FLRWAV
Trigger: CACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCA...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGTGGTaGAAGGCCAGGGAACGAATG +
Preference number: 4 (lower is better)
Translates to: AFCRFQSLSVPSSEAVSRADWLW*KARERM
Trigger: CATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGC...TCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp CTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGCCGACTGGCTGTGGTaGAAGGCCAGGGAACGAATG +
Preference number: 4 (lower is better)
Translates to: LAVVEGQGTNAVVVRAQGADWLW*KARERM
Trigger: CATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGC...ACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGTGAGCAGAGCCGACTaGCTGTGGTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPVSRAD*LWWKAR
Trigger: CCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCAC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAAGCCACAGCCAACACTaGGCCCCTGTGAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGESHSQH*APVSPE
Trigger: TTCCGGGCTCACAGGGGCCCAGTGTTGGCTGTGGCT...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGCCACAGCCAACACTaGGCCCCTGTGAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPSHSQH*APVSPE
Trigger: TTCCGGGCTCACAGGGGCCCAGTGTTGGCTGTGGCT...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGCAGGAGGCCAGGCGCTaGGAGGTGGGACTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQQEARR*EVGLKA
Trigger: GGCCTTCAGTCCCACCTCCCAGCGCCTGGCCTCCTG...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCATGCCCCTGTCGTCGTaGGCGGTGATGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPMPLSS*AVMVRG
Trigger: GCCTCTCACCATCACCGCCCACGACGACAGGGGCAT...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGTGGCAGGCAACAGCGTaGATGGCCTCCTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: DWTAGLSTPGSTRHGRAEWQATA*MASSCF
Trigger: GAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCA...CTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCAGGGCAGGGCCAGGTaGGCATCATACGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLQGRAR*ASYEDL
Trigger: AAGGTCTTCGTATGATGCCCACCTGGCCCTGCCCTG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VVEGQGTNAVVVRAQGELGCSPG*PIPRGH
Trigger: ATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCC...AAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp GCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGATCTGGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALFAIFACRVPLYLLLDLAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...CAGATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR TCA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RRILLGRDRLLQVPELERDLPQH*AAQALF
Trigger: AAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATC...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGAATGCCTTGGAGTTTaGCCCGACGGCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAECLGV*PDGFPA
Trigger: AGCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTGCAGGTTCCAGAGCTTaGGCGTGCCGTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: QSLLGAAHPHPAGQPECLAGSRA*ACRPRR
Trigger: CCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGC...AAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp GGTTCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCGCAGGTTCCAGAGCTTaGGCGTGCCGTCCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSTSSAAFFLAVTAFCRFAGSRA*ACRPRR
Trigger: CCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGC...GAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGAACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp CGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGCATTCTTCTTGGCCGTaGCCGCCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: RLAVVEGQGTNAVVVRAQHSSWP*PPSAGS
Trigger: GGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATG...CTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAACACTGGGCCCCTGTaGGCCCGGAAAGCATGTATA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLNTGPL*ARKACI
Trigger: TATACATGCTTTCCGGGCTCACAGGGGCCCAGTGTT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCAGGCTCGGTGCTGGTaGAGGCCACTGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRQARCW*RPLRWG
Trigger: TCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCTG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACCACGGCTAGGCAGGTaGCTGCGTCCAGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPPRLGR*LRPGVQ
Trigger: TTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCGCAGTCATGGCTTCCTaGCATCAGGAATGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLAVMAS*HQECAV
Trigger: AACGGCGCATTCCTGATGTCAGGAAGCCATGACTGC...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGCAGTCATGGCTTCCTaGCATCAGGAATGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAAVMAS*HQECAV
Trigger: AACGGCGCATTCCTGATGTCAGGAAGCCATGACTGC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAATCTTGCGGTGGGCCGTaGTCTCCTGCACGCACGTTT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGESCGGP*SPARTF
Trigger: AAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGA...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGATCTTGCGGTGGGCCGTaGTCTCCTGCACGCACGTTT +
Preference number: 4 (lower is better)
Translates to: LRGSAHLAVLGMGVQRLRSCGGP*SPARTF
Trigger: AAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGA...TCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp AGCCAAAGGAACCTTCATGTGGCCGGGGCTGGGGTGTGCCAGGAGGCGGGCCAGGGCAGGAGAATCGCTTaGACCTGGGAAGTGGAGATT +
Preference number: 4 (lower is better)
Translates to: SQRNLHVAGAGVCQEAGQGRRIA*TWEVEI
Trigger: AATCTCCACTTCCCAGGTTCAAGCGATTCTCCTGCC...CTGGCCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCCCACCTTTCACTCGGCTCCACTaGCCCGTTGAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: GNGRAWTACRGWCLCSPPFTRLH*PVELQR
Trigger: TCGCTGGAGCTCAACGGGGCAGTGGAGCCGAGTGAA...AGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp AGCCGCCCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCCCACCACTGAGCCCTaGAGGGCCTGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SRPSALCHLCLPRSSLSAPTTEP*RAWWSP
Trigger: AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGG...AGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGERPSAL*HLCLPR
Trigger: ACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQCRKGI*PSTEPP
Trigger: GGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAATCGTCCTCGCAGTTCTaGAGGAAGGGGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGESSSQF*RKGICP
Trigger: GGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGA...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGGCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGTCGTCCTCGCAGTTCTaGAGGAAGGGGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GPVTFGGSPSTSRRSARMSSSQF*RKGICP
Trigger: GGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGA...CATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTCGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: GPAGNGRAWTACRGWCLCRCFLC*TLSSSS
Trigger: CGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG...ACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp CGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGCGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: RLAVVEGQGTNAVVVRAQRCFLC*TLSSSS
Trigger: CGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG...CTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCACACGCTGCTTCTTGTaGTGCACGCTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEATRCFL*CTLSSS
Trigger: TGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGT...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGGAGCTTCACACGCTaGTTCTTGTGCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: RLAVVEGQGTNAVVVRAQGSFTR*FLCCTL
Trigger: CAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCC...CTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGCTCCCATCCACAGTaGACCGCCGAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTGSHPQ*TAEGLE
Trigger: CTCCAGACCCTCGGCGGTGCACTGTGGATGGGAGCC...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAAGGCCAGGGAACGAATaGCGTCGTAGTGCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGERPGNE*RRSASA
Trigger: TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCT...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GTCGTTGTCGTTGGTGACGGTGAGATCTGCCAAGTCCCCCAGGCTCACCTCCCCAGGCCAGGGAACGAATaGCGTCGTAGTGCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: VVVVGDGEICQVPQAHLPRPGNE*RRSASA
Trigger: TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCT...GGGGAGGTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEAVTAF*RFQSLS
Trigger: GCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCATGGATGCAGGCATCTaGCCCGCCACTGTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLMDAGI*PATVAV
Trigger: TACTGCTACAGTGGCGGGGCAGATGCCTGCATCCAT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTGTCCAGGAAGCGGATaGCCCTGTCGTCGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQCPGSG*PCRRGR
Trigger: CCGCCCACGACGACAGGGGCATCCGCTTCCTGGACA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCTGTGCAACCATGGAGTaGACCGGCTTACCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEACATME*TGLPVR
Trigger: TCGGACAGGTAAGCCGGTGCACTCCATGGTTGCACA...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATGGATGGCCTCCTCGTaGTTCTTGCGGTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPWMASS*FLRWAV
Trigger: CACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACATCCCCAGGCTGGATaGTTGGGGAAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEHPQAG*LGKAAV
Trigger: AACGGCTGCCTTCCCCAAGCATCCAGCCTGGGGATG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGACCCGGCCCTGGCTGTaGTGCCCTCTGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRTRPWL*CPLESS
Trigger: GCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGACCCGGCCCTGGCTGTaGTGCCCTCTGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQTRPWL*CPLESS
Trigger: GCTGCTTTCCAGAGGGCAGCACAGCCAGGGCCGGGT...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGGCGCTGGGAGGGCTaGCCTAGGAGTGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGRWEG*PRSVGQ
Trigger: TTGCCCAACACTCCTAGGGCAGCCCTCCCAGCGCCC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEATACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVGNGRA*TACRGW
Trigger: CCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACGGGCACCAGAGCCTTaGATGGGAGCTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGERAPEP*MGASHA
Trigger: AGCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCGGGCACCAGAGCCTTaGATGGGAGCTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGRAPEP*MGASHA
Trigger: AGCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGACGGCTTTCCAGCTCATaGGGGCTCCCATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: QSRLAVVEGQGTNAVVVRRLSSS*GLPSTV
Trigger: CACTGTGGATGGGAGCCCCCATGAGCTGGAAAGCCG...TCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCGGGCCAGTCACTTTTaGGGGCAGCCCATCCACATC +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGRASHF*GQPIHI
Trigger: GATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCAGAGCCGACTGGCTGTaGTGGAAGGCCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGRADWL*WKARER
Trigger: TCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCT...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTAGCCACAGCCAACACTaGGCCCCTGTGAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: RRILLGRDRLLQVPELERSHSQH*APVSPE
Trigger: TTCCGGGCTCACAGGGGCCCAGTGTTGGCTGTGGCT...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTGGCCCTCCAGGACGTaGCTCAGCACGCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQWPSRT*LSTLGS
Trigger: CGACCCAAGCGTGCTGAGCCACGTCCTGGAGGGCCA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACATGGCCCTCCAGGACGTaGCTCAGCACGCTTGGGTCG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTWPSRT*LSTLGS
Trigger: CGACCCAAGCGTGCTGAGCCACGTCCTGGAGGGCCA...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGGACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGCCAGGTGTGCAACCATaGAGTGCACCGGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: RTPLTGLRGSAHLAVLGMPGVQP*SAPAYL
Trigger: CAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGG...CATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAATCGTGCTTCTTGCGGTaGGCCGTGATCTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGESCFLR*AVISCT
Trigger: CGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGA...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGTCGTGCTTCTTGCGGTaGGCCGTGATCTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPSCFLR*AVISCT
Trigger: CGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGA...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGGGGAAGGCAGCCGTTaGGGAGGGATTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPGEGSR*GGIPGE
Trigger: TTCCCCAGGAATCCCTCCCCAACGGCTGCCTTCCCC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGCCCATCCCCAGGCTaGATGCTTGGGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGPSPG*MLGEGS
Trigger: GCTGCCTTCCCCAAGCATCCAGCCTGGGGATGGGCC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCAAAGACACCCGGCCCTaGCTGTGCTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPKDTRP*LCCPLE
Trigger: TTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTT...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAAGCCGTCTCTACCCATaGGCGACCCCATGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTSRLYP*ATPWGA
Trigger: AGCGCCCCATGGGGTCGCCCATGGGTAGAGACGGCT...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGACGGTCCCCCTCGCTaGAGTGAGACTGAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPDGPPR*SETEEG
Trigger: CCCTTCCTCAGTCTCACTCCAGCGAGGGGGACCGTC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR CCA 90 bp AGCCAAAGGAACCTTCATGTGGCCGGGGCTGGGGTGTGCCAGGAGGCGGGCCAGCTTGAACCTGGGAAGTaGAGATTGCAGTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: SQRNLHVAGAGVCQEAGQLEPGK*RLQWAK
Trigger: CTTGGCCCACTGCAATCTCCACTTCCCAGGTTCAAG...CTGGCCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp CACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCAGGACGCCCCTGACTaGACTGCGGGGCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: HLAVLGMGVQRLRMRGFCQDAPD*TAGLST
Trigger: TGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGTCCTG...GCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCATACTCTAGCATCTTaGTCCGCCGCACCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPHTLAS*SAAPGP
Trigger: CGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATG...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGCSPG*PIPRGH
Trigger: ATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQDLPQH*AAQALF
Trigger: AAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCCATTCTTCTTGGCCGTaGCCGCCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPHSSWP*PPSAGS
Trigger: GGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATG...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACACCACGGCTAGGCAGGTaGCTGCGTCCAGGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTPRLGR*LRPGVQ
Trigger: TTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGG...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGCCATCCTCGGGGGTaGTTCCTGAAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGHPRG*FLKGAH
Trigger: ATGGGCCCCTTTCAGGAATCACCCCCGAGGATGGCC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTTCACTCGGCTCCACTaGCCCGTTGAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: PVTFGGSPSTSRRSARMPFTRLH*PVELQR
Trigger: TCGCTGGAGCTCAACGGGGCAGTGGAGCCGAGTGAA...AGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp CACACGCTGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTCGTCCTCGCAGTTCTaGAGGAAGGGGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HTLLLVLHAVQLIVLVAVSSSQF*RKGICP
Trigger: GGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGA...GACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp GCAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGACACGCTGCTTCTTGTaGTGCACGCTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AEPTGCGGRPGNECRRSATRCFL*CTLSSS
Trigger: TGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGT...CGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGGAGCTTCACACGCTaGTTCTTGTGCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPGSFTR*FLCCTL
Trigger: CAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCC...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGGGAGCTTCACACGCTaGTTCTTGTGCTGCACGCTG +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPGSFTR*FLCCTL
Trigger: CAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVGDGEI*QVPQAH
Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp ACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTCTTCCAACTATGGATaGAGGCATCTGCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TGCGGRPGNECRRSASAGSSNYG*RHLPRH
Trigger: GTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGA...CCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGTGCTGGGGTCCCAGATaGGGACGGTGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRCWGPR*GRCHQQ
Trigger: CTGCTGATGGCACCGTCCGCATCTGGGACCCCAGCA...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTGCTGGGGTCCCAGATaGGGACGGTGCCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQCWGPR*GRCHQQ
Trigger: CTGCTGATGGCACCGTCCGCATCTGGGACCCCAGCA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGAGGCCGGGCTGCTGCTaGTGGGGTCCCAGATGCGGA +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWRPGCC*WGPRCG
Trigger: TCCGCATCTGGGACCCCAGCAGCAGCAGCCCGGCCT...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAATCTGGGTTGGACCGCTaGTGCCCCGGGACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKSGLDR*CPGTPA
Trigger: CGCTGGAGTCCCGGGGCAGCAGCGGTCCAACCCAGA...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp CACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCTGGATGGCCTCCTCGTaGTTCTTGCGGTGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: HLAVLGMGVQRLRMRGFCWMASS*FLRWAV
Trigger: CACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCA...GCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACATCCCCAGGCTGGATaGTTGGGGAAGGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPHPQAG*LGKAAV
Trigger: AACGGCTGCCTTCCCCAAGCATCCAGCCTGGGGATG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GCAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGCTGGGAAGTGGAGATTaGAGTGGGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: AEPTGCGGRPGNECRRSALGSGD*SGPRSC
Trigger: GCACGATCTTGGCCCACTGCAATCTCCACTTCCCAG...CGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACTCGCTCCTCCATCATaGAGGCCCCGGGGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKLAPPS*RPRGRP
Trigger: AGGCCGGCCCCGGGGCCTCCATGATGGAGGAGCGAG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp CGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGCTTTCTTCTCCCCCTaGTTCAGGTCTGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: RDRLLQVPELERAVLGGGAFFSP*FRSVPN
Trigger: GTTTGGGACAGACCTGAACCAGGGGGAGAAGAAAGC...ACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGCTTTCTTCTCCCCCTaGTTCAGGTCTGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAAFFSP*FRSVPN
Trigger: GTTTGGGACAGACCTGAACCAGGGGGAGAAGAAAGC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: TGCGGRPGNECRRSASAGTACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...CCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQGNGRA*TACRGW
Trigger: CCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCCCACCTCTTGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: NGRAWTACRGWCLCSPPLGNGRA*TACRGW
Trigger: CCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC...AAGAGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CCA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTCGGGCACCAGAGCCTTaGATGGGAGCTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVRAPEP*MGASHA
Trigger: AGCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCG...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACGGCTTTCCAGCTCATaGGGGCTCCCATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPRLSSS*GLPSTV
Trigger: CACTGTGGATGGGAGCCCCCATGAGCTGGAAAGCCG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGAAGACGTCTTCATGTaGCCGGGGCTGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQEDVFM*PGLGCA
Trigger: GGCACACCCCAGCCCCGGCCACATGAAGACGTCTTC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGAAGACGTCTTCATGTaGCCGGGGCTGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQREDVFM*PGLGCA
Trigger: GGCACACCCCAGCCCCGGCCACATGAAGACGTCTTC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGCCGACTGGCTGTGGTaGAAGGCCAGGGAACGAATG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPADWLW*KARERM
Trigger: CATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTAGAGCCGACTGGCTGTaGTGGAAGGCCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: VVEGQGTNAVVVRAQGELRADWL*WKARER
Trigger: TCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCT...AAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGTGAGCAGAGCCGACTaGCTGTGGTGGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRVSRAD*LWWKAR
Trigger: CCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTCAC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAAGCCACAGCCAACACTaGGCCCCTGTGAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTSHSQH*APVSPE
Trigger: TTCCGGGCTCACAGGGGCCCAGTGTTGGCTGTGGCT...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGGGAATCTTCCAACTATaGATGCAGGCATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FQSLSVPSSEAVSRADWLGIFQL*MQASAP
Trigger: CGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCC...CAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGACCACTTGGTTGATCTaGGTTGGACCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPTTWLI*VGPLLP
Trigger: GGGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGT...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCACCACTTGGTTGATCTaGGTTGGACCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: RHGRAETQNAGFLPSPQPTTWLI*VGPLLP
Trigger: GGGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGT...GGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGATGCCCCTGTCGTCGTaGGCGGTGATGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQMPLSS*AVMVRG
Trigger: GCCTCTCACCATCACCGCCCACGACGACAGGGGCAT...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGTCGTGCTTCTTGCGGTaGGCCGTGATCTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: GSAHLAVLGMGVQRLRMRSCFLR*AVISCT
Trigger: CGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGA...CCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp AGGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCCAGGGCAGGGCCAGGTaGGCATCATACGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: RHGRAETQNAGFLPSPQPQGRAR*ASYEDL
Trigger: AAGGTCTTCGTATGATGCCCACCTGGCCCTGCCCTG...GGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGGGAAGGCAGCCGTTaGGGAGGGATTCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGEGSR*GGIPGE
Trigger: TTCCCCAGGAATCCCTCCCCAACGGCTGCCTTCCCC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGACCATGGGCGACCCCATaGGGCGCTGGGAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRPWATP*GAGRAA
Trigger: GGCAGCCCTCCCAGCGCCCCATGGGGTCGCCCATGG...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACATACTCTAGCATCTTaGTCCGCCGCACCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPHTLAS*SAAPGP
Trigger: CGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCCCACCTCTTCCAGGTCATACTCTAGCATCTTaGTCCGCCGCACCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RAWTACRGWCLCSPPLPGHTLAS*SAAPGP
Trigger: CGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATG...ACCTGGAAGAGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR TCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGCTCCACTGCCCCGTTaGGCTCCAGCGAGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: VRAQGELGVPRLLKSIFAAPLPR*APASGP
Trigger: TGGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGC...AGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCGAATGCCTTGGAGTTTaGCCCGACGGCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGECLGV*PDGFPA
Trigger: AGCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTC...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GAGCAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGGAATGCCTTGGAGTTTaGCCCGACGGCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EQSRLAVVEGQGTNAVVVECLGV*PDGFPA
Trigger: AGCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTC...CACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGAGTGCGAGCGCAGGGTaGACTTGGGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRSASAG*TWGSTS
Trigger: AGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACGTCCTCGGAGGCGGTaGGCAGAGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKRPRRR*AEPTGC
Trigger: ACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAAACACTGGGCCCCTGTaGGCCCGGAAAGCATGTATA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGENTGPL*ARKACI
Trigger: TATACATGCTTTCCGGGCTCACAGGGGCCCAGTGTT...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCCATAGGGATCCATGCTaGGGTCTGGAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAHRDPC*GLESSN
Trigger: GTTGGAAGATTCCAGACCTCAGCATGGATCCCTATG...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCGCAGTCATGGCTTCCTaGCATCAGGAATGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGAVMAS*HQECAV
Trigger: AACGGCGCATTCCTGATGTCAGGAAGCCATGACTGC...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: QVPELERAVLGGGEQSRLHDEDV*GEAKGT
Trigger: GGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATG...CAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp CAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTCCAGTCTGGCATAGGTaGCGCCTTCCCCACACTGAG +
Preference number: 4 (lower is better)
Translates to: QSLLGAAHPHPAGQPECLPVWHR*RLPHTE
Trigger: CTCAGTGTGGGGAAGGCGTCACCTATGCCAGACTGG...AAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACATACTGTCGGAGAAGCTaGCGCCCCTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTYCRRS*RPSFHT
Trigger: GGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTA...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACCCACCACTGAGCCCTaGAGGGCCTGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKPTTEP*RAWWSP
Trigger: AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAALCHL*LPRSSL
Trigger: TAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGAGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LQVPELERAVLGGGEQSRALCHL*LPRSSL
Trigger: TAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGC...TCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp CACGCTGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: HAASCAARCPAHRPRRCLRPSAL*HLCLPR
Trigger: ACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCG...AAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGGCAGGCCGGGCTGCTaGTGCTGGGGTCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEGRPGC*CWGPRC
Trigger: GCATCTGGGACCCCAGCAGCAGCAGCCCGGCCTGCC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGACTGCGTCCAGGTGTaGAACCATGGAGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQDCVQV*NHGVHR
Trigger: CCGGTGCACTCCATGGTTGCACACCTGGACGCAGTC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGACTGCGTCCAGGTGTaGAACCATGGAGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRDCVQV*NHGVHR
Trigger: CCGGTGCACTCCATGGTTGCACACCTGGACGCAGTC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGGGCGCTGGGAGGGCTaGCCTAGGAGTGTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKGRWEG*PRSVGQ
Trigger: TTGCCCAACACTCCTAGGGCAGCCCTCCCAGCGCCC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGAAGGGGACCGAGGGTaGAGGGTAGAACCAAACAAG +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEEGDRG*RVEPNK
Trigger: CTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCCCATCCTCTCTGATTaGCGGCCAGGTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPPILSD*RPGWLS
Trigger: TGACAACCAACCTGGCCGGCAATCAGAGAGGATGGG...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACCCATCCTCTCTGATTaGCGGCCAGGTTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEPILSD*RPGWLS
Trigger: TGACAACCAACCTGGCCGGCAATCAGAGAGGATGGG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGTACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCGGCTTTCCAGCTCATaGGGGCTCCCATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRRLSSS*GLPSTV
Trigger: CACTGTGGATGGGAGCCCCCATGAGCTGGAAAGCCG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GCAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: AEPTGCGGRPGNECRRSASARMP*SLTRRL
Trigger: AAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGA...CGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACACGGGCCAGTCACTTTTaGGGGCAGCCCATCCACATC +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTRASHF*GQPIHI
Trigger: GATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCG...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGAGAGCCGACTGGCTGTaGTGGAAGGCCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRRADWL*WKARER
Trigger: TCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGAGCCGACTGGCTGTaGTGGAAGGCCAGGGAACGA +
Preference number: 4 (lower is better)
Translates to: STSSAAFFLAVTAFCRFQRADWL*WKARER
Trigger: TCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCT...CTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp CCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGGGTGAGAGGCTGGTTTaGATGACTCACCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: PLTGLRGSAHLAVLGMGVGERLV*MTHHLV
Trigger: AACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACC...CACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACATCGTGCTTCTTGCGGTaGGCCGTGATCTCCTGCACG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTSCFLR*AVISCT
Trigger: CGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGA...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAAGGCAACAGCGTGGATaGCCTCCTCGTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPRQQRG*PPRASC
Trigger: GCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCT...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGAGGCAACAGCGTGGATaGCCTCCTCGTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GSAHLAVLGMGVQRLRMRRQQRG*PPRASC
Trigger: GCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCT...CCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTGGCAGGCAACAGCGTaGATGGCCTCCTCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQWQATA*MASSCF
Trigger: GAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCATCATACGAAGACCTTaGCCAGGGCATCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGIIRRP*PGHQRQ
Trigger: CTGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGAT...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAATCATACGAAGACCTTaGCCAGGGCATCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEIIRRP*PGHQRQ
Trigger: CTGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGAT...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTATCATACGAAGACCTTaGCCAGGGCATCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: WTAGLSTPGSTRHGRAETIIRRP*PGHQRQ
Trigger: CTGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGAT...AGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACACCACCAGGCTCCATaGCAAACAGACAGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPHHQAP*QTDRGQ
Trigger: CTGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAAAGACACCCGGCCCTaGCTGTGCTGCCCTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQKDTRP*LCCPLE
Trigger: TTCCAGAGGGCAGCACAGCCAGGGCCGGGTGTCTTT...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCGCCTTGGTTAGTGTCTaGAAAGCAGTGGAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGALVSV*KAVERA
Trigger: GGCCCTCTCCACTGCTTTCCAGACACTAACCAAGGC...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAAGCCGTCTCTACCCATaGGCGACCCCATGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKSRLYP*ATPWGA
Trigger: AGCGCCCCATGGGGTCGCCCATGGGTAGAGACGGCT...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR CAA 72 bp TCCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTaGACCCGACGGCTTTCTGCAGGGTCGAGGCATAGG +
Preference number: 4 (lower is better)
Translates to: STSRRSARMPWS*TRRLSAGSRHR
Trigger: CCTATGCCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
3UTR CAA 72 bp CCCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGATC +
Preference number: 4 (lower is better)
Translates to: PSTEPPKRSLPS*PAAFLFICSSI
Trigger: GATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR TCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWDLPQH*AAQALF
Trigger: AAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp TCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGCATTCTTCTTGGCCGTaGCCGCCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: STSSAAFFLAVTAFCRFQHSSWP*PPSAGS
Trigger: GGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATG...CTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGACTCACCACTTGGTTaGTCTGGGTTGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRDSPLG*SGLDRC
Trigger: GCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAATGCGGGCAGTCATGGCTTCCTaGCATCAGGAATGCGCCGTT +
Preference number: 4 (lower is better)
Translates to: GSAHLAVLGMGVQRLRMRAVMAS*HQECAV
Trigger: AACGGCGCATTCCTGATGTCAGGAAGCCATGACTGC...CCGCATTCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATCTGGAAAGCAGCTCTaGTACCAGGAGCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPSGKQL*YQERLS
Trigger: TGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCAGACAGGGAGGAGACTaGCTGAGACCATCACACAGT +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPRQGGD*LRPSHS
Trigger: ACTGTGTGATGGTCTCAGTCAGTCTCCTCCCTGTCT...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTGACCCGAGAATGCCTTGGAGTTTaGCCCGACGGCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GSPSTSRRSARMPWSLTRECLGV*PDGFLQ
Trigger: CTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTC...TCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp GCGAGCGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGCAATTTAAAAACTaGAGCCAGCTGGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: ASGPAGNGRAWTACRGWCLQFKN*SQLGLD
Trigger: ATCCAGTCCCAGCTGGCTTCAGTTTTTAAATTGCAG...ACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp CGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTTATTTGGCCCTTTCCTaGTTCAGCGCATACTCTAGC +
Preference number: 4 (lower is better)
Translates to: RDRLLQVPELERAVLGGGYLALS*FSAYSS
Trigger: GCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATA...ACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp CGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTATTTGGCCCTTTCCTaGTTCAGCGCATACTCTAGC +
Preference number: 4 (lower is better)
Translates to: RPSRERTRLDRMSRMVSVYLALS*FSAYSS
Trigger: GCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATA...CACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp GATGCAGGCATCTGCCCCGCCACTGTAGCAGTATTCACTGTTGCTGCCCATAGCTTCACTCGGCTCCACTaGCCCGTTGAGCTCCAGCGA +
Preference number: 4 (lower is better)
Translates to: DAGICPATVAVFTVAAHSFTRLH*PVELQR
Trigger: TCGCTGGAGCTCAACGGGGCAGTGGAGCCGAGTGAA...GCTATGGGCAGCAACAGTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR GCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGCCCACCACTGAGCCCTaGAGGGCCTGGTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEPTTEP*RAWWSP
Trigger: AGGGCTCCACCAGGCCCTGCAGGGCTCAGTGGTGGG...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRRCFLC*TLSSSS
Trigger: CGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGCGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQRCFLC*TLSSSS
Trigger: CGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCG...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAATGTCCAGGAAGCGGATaGCCCTGTCGTCGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKCPGSG*PCRRGR
Trigger: CCGCCCACGACGACAGGGGCATCCGCTTCCTGGACA...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATGTGCAACCATGGAGTaGACCGGCTTACCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPCATME*TGLPVR
Trigger: TCGGACAGGTAAGCCGGTGCACTCCATGGTTGCACA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGATTCCACGGGGCCATTaGAGACTTGTTCTGACACAT +
Preference number: 4 (lower is better)
Translates to: FQSLSVPSSEAVSRADWLIPRGH*RLVLTH
Trigger: ATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAAT...CAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp GTAGTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGGCCTGGTGGAGCCCTaGGGGCCCCTTCACTCGGCT +
Preference number: 4 (lower is better)
Translates to: VVRAQGELGVPRLLKSIFGLVEP*GPLHSA
Trigger: AGCCGAGTGAAGGGGCCCCCAGGGCTCCACCAGGCC...AAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp CGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCCACCAGAGCCTTGGATaGGAGCTTCACACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RILLGRDRLLQVPELERAHQSLG*ELHTLL
Trigger: AAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGTG...GGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGSARMP*SLTRRL
Trigger: AAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGA...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPSARMP*SLTRRL
Trigger: AAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGSCGRG*GVPGGG
Trigger: CCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGA...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGCAGGAGGCCAGGCGCTaGGAGGTGGGACTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEQEARR*EVGLKA
Trigger: GGCCTTCAGTCCCACCTCCCAGCGCCTGGCCTCCTG...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGACCACTTGGTTGATCTaGGTTGGACCGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRTTWLI*VGPLLP
Trigger: GGGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACACCAGGTGTGCAACCATaGAGTGCACCGGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTPGVQP*SAPAYL
Trigger: CAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGG...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCAACAGCGTGGATaGCCTCCTCGTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQRQQRG*PPRASC
Trigger: GCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCT...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCAGGGCAGGGCCAGGTaGGCATCATACGAAGACCTT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRQGRAR*ASYEDL
Trigger: AAGGTCTTCGTATGATGCCCACCTGGCCCTGCCCTG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCGTCCTCGGAGGCGGTaGGCAGAGCCGACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGRPRRR*AEPTGC
Trigger: ACAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCATAGGGATCCATGCTaGGGTCTGGAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGHRDPC*GLESSN
Trigger: GTTGGAAGATTCCAGACCTCAGCATGGATCCCTATG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp CTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGAAGAGGCTGGTTTGGATaGCTCACCACTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: LRGSAHLAVLGMGVQRLRRGWFG*LTTWLI
Trigger: GATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCT...TCTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGTCTGGAAAGCAGCTCTaGTACCAGGAGCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRSGKQL*YQERLS
Trigger: TGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGA...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGAGTCTTGGAAAAACTaGTCCCTAAAGACACCCGGC +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPESWKN*SLKTPG
Trigger: GCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGACTC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGGTGGGGCGGCGCCATaGAAATCCCGTTATTTATAC +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPGGAAP*KSRYLY
Trigger: GTATAAATAACGGGATTTTCATGGCGCCGCCCCACC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAATGGCCCCATCCTCTCTaGTTGCCGGCCAGGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKWPHPL*LPARLV
Trigger: AACCAACCTGGCCGGCAATCAGAGAGGATGGGGCCA...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR TCA 90 bp CAGGTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGCAATTACTTTTACTCTaGGAGAAAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: QVPELERAVLGGGEQSRLQLLLL*EKGRPA
Trigger: TGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTG...CAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPHDEDV*GEAKGT
Trigger: GGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATG...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR TCA 90 bp GCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCCATGATGAAGACGTCTaGGGAGAAGCCAAAGGAACC +
Preference number: 4 (lower is better)
Translates to: ASHFWGQPIHIPQVSQNAHDEDV*GEAKGT
Trigger: GGTTCCTTTGGCTTCTCCTCAGACGTCTTCATCATG...GGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTGCGTTCCTCTTTATCTaGTCCTCGATCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GPAGNGRAWTACRGWCLCAFLFI*SSICFT
Trigger: GGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGC...ACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp ACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGGCGTTCCTCTTTATCTaGTCCTCGATCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: TGCGGRPGNECRRSASAGAFLFI*SSICFT
Trigger: GGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGC...CCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp ACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTTTGCCATCTTTGCCTaGCGCGTTCCTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: TGCGGRPGNECRRSASAGFAIFA*RVPLYL
Trigger: CAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAA...CCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWRPSAL*HLCLPR
Trigger: ACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCG...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGTGCAGGAAGGGGATCTaGCCCAGCACTGAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQECRKGI*PSTEPP
Trigger: GGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGACACGCTGCTTCTTGTaGTGCACGCTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRTRCFL*CTLSSS
Trigger: TGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGACACGCTGCTTCTTGTaGTGCACGCTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQTRCFL*CTLSSS
Trigger: TGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGT...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CACGCTGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTACACGCTGCTTCTTGTaGTGCACGCTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HAASCAARCPAHRPRRCLTRCFL*CTLSSS
Trigger: TGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGT...AAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWGDGEI*QVPQAH
Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGATGGATGCAGGCATCTaGCCCGCCACTGTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRMDAGI*PATVAV
Trigger: TACTGCTACAGTGGCGGGGCAGATGCCTGCATCCAT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTGTGCAACCATGGAGTaGACCGGCTTACCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQCATME*TGLPVR
Trigger: TCGGACAGGTAAGCCGGTGCACTCCATGGTTGCACA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAAGGGGACCGAGGGTaGAGGGTAGAACCAAACAAG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTEGDRG*RVEPNK
Trigger: CTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTC...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp CTGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTCGTCACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LLLVLHAVQLIVLVAVFVTACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...GACGAAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCACCAGAGCCTTGGATaGGAGCTTCACACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRHQSLG*ELHTLL
Trigger: AAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGTG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGGAATCTTCCAACTATaGATGCAGGCATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPGIFQL*MQASAP
Trigger: CGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGGACCCCGTGCTCGCTaGCTGTGGGGAAGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEGPRAR*LWGRCR
Trigger: TCTGCACCTTCCCCACAGCCAGCGAGCACGGGGTCC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGGTGAGAGGCTGGTTTaGATGACTCACCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEGERLV*MTHHLV
Trigger: AACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGGCCCATCCCCAGGCTaGATGCTTGGGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRGPSPG*MLGEGS
Trigger: GCTGCCTTCCCCAAGCATCCAGCCTGGGGATGGGCC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGGGCAATCCCTGGCCTaGAAGCCTTGGTTAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQGQSLA*KPWLVS
Trigger: AGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAATCGCTTCCACCTTTGTaGTTATGGAGCCCCAAACCT +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGESLPPL*LWSPKP
Trigger: AGGTTTGGGGCTCCATAACCACAAAGGTGGAAGCGA...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539396.5
CDS-3UTR CCA 90 bp CCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCAAAACTGAAGCCAGCTaGGACTGGATGTCGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PAGNGRAWTACRGWCLCSKTEAS*DWMSEK
Trigger: CTTCTCCGACATCCAGTCCCAGCTGGCTTCAGTTTT...GCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
3UTR CAA 72 bp TTGCTGTCAGACAGATCGCAGCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCCAAGTCCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLSDRSQLRSLS*VTVRSAKSPRL
Trigger: GAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGACAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp GCCACTGTAGCAGTATTCACTGTTGCTGCCCATAGCCACAGCCAACACTGGGCCAACACTGGGCCCCTGTaGGCCCGGAAAGCATGTATA +
Preference number: 4 (lower is better)
Translates to: ATVAVFTVAAHSHSQHWANTGPL*ARKACI
Trigger: TATACATGCTTTCCGGGCTCACAGGGGCCCAGTGTT...GGCCCAGTGTTGGCTGTGGCTATGGGCAGCAACAGTGAATACTGCTACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACATAGGGATCCATGCTaGGGTCTGGAATCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPHRDPC*GLESSN
Trigger: GTTGGAAGATTCCAGACCTCAGCATGGATCCCTATG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCAGGCTCGGTGCTGGTaGAGGCCACTGAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGQARCW*RPLRWG
Trigger: TCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCTG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGACTCACCACTTGGTTaGTCTGGGTTGGACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKDSPLG*SGLDRC
Trigger: GCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAAGAGGCTGGTTTGGATaGCTCACCACTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPRGWFG*LTTWLI
Trigger: GATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCT...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGTGGGGCGGCGCCATaGAAATCCCGTTATTTATAC +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGGAAP*KSRYLY
Trigger: GTATAAATAACGGGATTTTCATGGCGCCGCCCCACC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp CAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGGGGAGAGGACAAGATaGAGAATCACAGCTTCATGT +
Preference number: 4 (lower is better)
Translates to: QSRLAVVEGQGTNAVVVRGERTR*RITASC
Trigger: ACATGAAGCTGTGATTCTTCATCTTGTCCTCTCCCC...TCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR GCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCGTTCCTCTTTATCTaGTCCTCGATCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPAFLFI*SSICFT
Trigger: GGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGC...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTTTGCCATCTTTGCCTaGCGCGTTCCTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPFAIFA*RVPLYL
Trigger: CAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAATCGTCCTCGCAGTTCTaGAGGAAGGGGATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKSSSQF*RKGICP
Trigger: GGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGA...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGGGCTCCCATCCACAGTaGACCGCCGAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGGSHPQ*TAEGLE
Trigger: CTCCAGACCCTCGGCGGTGCACTGTGGATGGGAGCC...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAGACTGCGTCCAGGTGTaGAACCATGGAGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKDCVQV*NHGVHR
Trigger: CCGGTGCACTCCATGGTTGCACACCTGGACGCAGTC...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATCTGAGGCTCCCGGCTaGCACCCTTTCTCCCAGCAC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRSEAPG*HPFSQH
Trigger: GTGCTGGGAGAAAGGGTGGCAGCCGGGAGCCTCAGA...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGATTCCACGGGGCCATTaGAGACTTGTTCTGACACAT +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPIPRGH*RLVLTH
Trigger: ATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAAT...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRGNGRA*TACRGW
Trigger: CCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACGGCTTTCCAGCTCATaGGGGCTCCCATCCACAGTG +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKRLSSS*GLPSTV
Trigger: CACTGTGGATGGGAGCCCCCATGAGCTGGAAAGCCG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACGGGCCAGTCACTTTTaGGGGCAGCCCATCCACATC +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKRASHF*GQPIHI
Trigger: GATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGGAATCTTCCAACTATaGATGCAGGCATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRGIFQL*MQASAP
Trigger: CGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAATGCCCCTGTCGTCGTaGGCGGTGATGGTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRMPLSS*AVMVRG
Trigger: GCCTCTCACCATCACCGCCCACGACGACAGGGGCAT...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATCAGGAATGCGCCGTTaGGGTCCACGGCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRSGMRR*GPRLGR
Trigger: CCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGA...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGAGGCAACAGCGTGGATaGCCTCCTCGTGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWRQQRG*PPRASC
Trigger: GCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCT...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCCCAGGCTGGATGCTTaGGGAAGGCAGCCGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGPRLDA*GRQPLG
Trigger: CCCCAACGGCTGCCTTCCCCAAGCATCCAGCCTGGG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGGGCCCATCCCCAGGCTaGATGCTTGGGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGGPSPG*MLGEGS
Trigger: GCTGCCTTCCCCAAGCATCCAGCCTGGGGATGGGCC...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR CAA 72 bp GGAGCTCAAGGGGAGAACCTGGCACCTTCTGGAGTCTaGGAAAAACTGATCCCTAAAGACACCCGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GAQGENLAPSGV*EKLIPKDTRPW
Trigger: CCAGGGCCGGGTGTCTTTAGGGATCAGTTTTTCCAAGACTCCAGAAGGTGCCAGGTTCTCCCCTTGAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
3UTR CAA 72 bp GCATCTTTGCTGTCAGACAGATCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGATCTGCCAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ASLLSDRSQLRS*SLVTVRSAKSP
Trigger: GGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATCTGTCTGACAGCAAAGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR TCA 90 bp GTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTAGTGCGAGCGCAGGGTaGACTTGGGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: VRAQGELGVPRLLKSIFASASAG*TWGSTS
Trigger: AGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACT...AGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR TCA 90 bp GAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTAGCAGTATTCACAGTGCGAGCGCAGGGTaGACTTGGGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: ESSNYGCRHLPRHCSSIHSASAG*TWGSTS
Trigger: AGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACT...GTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR TCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGTCTTGCGGTGGGCCGTaGTCTCCTGCACGCACGTTT +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQESCGGP*SPARTF
Trigger: AAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGA...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGGGCCATCCTCGGGGGTaGTTCCTGAAAGGGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGGHPRG*FLKGAH
Trigger: ATGGGCCCCTTTCAGGAATCACCCCCGAGGATGGCC...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGTCTGGAAAGCAGCTCTaGTACCAGGAGCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWSGKQL*YQERLS
Trigger: TGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGA...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACAATTACTTTTACTCTaGGAGAAAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEQLLLL*EKGRPA
Trigger: TGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGTACTGTCGGAGAAGCTaGCGCCCCTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEYCRRS*RPSFHT
Trigger: GGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTA...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp CGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCTACTGTCGGAGAAGCTaGCGCCCCTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: RAQGELGVPRLLKSIFAVYCRRS*RPSFHT
Trigger: GGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACAGTA...GACAGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGCGTTCCTCTTTATCTaGTCCTCGATCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPAFLFI*SSICFT
Trigger: GGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATTTGCCATCTTTGCCTaGCGCGTTCCTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPFAIFA*RVPLYL
Trigger: CAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCTTTGCCATCTTTGCCTaGCGCGTTCCTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: RILLGRDRLLQVPELERAFAIFA*RVPLYL
Trigger: CAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAA...GGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR GCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRALCHL*LPRSSL
Trigger: TAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQALCHL*LPRSSL
Trigger: TAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp ACTGTAGCAGTATTCACTGTTGCTGCCCATAGCCACAGCCAACACTGGGCCCCTACACGCTGCTTCTTGTaGTGCACGCTGTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TVAVFTVAAHSHSQHWAPTRCFL*CTLSSS
Trigger: TGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGT...AGGGGCCCAGTGTTGGCTGTGGCTATGGGCAGCAACAGTGAATACTGCTACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR GCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGGTGACGGTGAGATCTaGCAAGTCCCCCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEGDGEI*QVPQAH
Trigger: GTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAAGGCCAGGGAACGAATaGCGTCGTAGTGCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRRPGNE*RRSASA
Trigger: TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCT...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTAGCAGTATTCACAGGCCAGGGAACGAATaGCGTCGTAGTGCGAGCGCA +
Preference number: 4 (lower is better)
Translates to: ESSNYGCRHLPRHCSSIHRPGNE*RRSASA
Trigger: TGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCT...GTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR GCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGCCGTGACCGCCTTCTaGAGGTTCCAGAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRAVTAF*RFQSLS
Trigger: GCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGTCTTCCAACTATGGATaGAGGCATCTGCCCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWSSNYG*RHLPRH
Trigger: GTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGA...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GAGGTCTGGAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTAGCACACCAGAGCCTTGGATaGGAGCTTCACACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: EVWNLPTMDAGICPATVAHQSLG*ELHTLL
Trigger: AAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGTG...TGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGCGGGCACCAGAGCCTTaGATGGGAGCTTCACACGCT +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQERAPEP*MGASHA
Trigger: AGCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCG...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGGGCAATCCCTGGCCTaGAAGCCTTGGTTAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKGQSLA*KPWLVS
Trigger: AGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACACCACCTTTGTGGTTATaGAGCCCCAAACCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTPPLWL*SPKPLR
Trigger: CCTAAGAGGTTTGGGGCTCCATAACCACAAAGGTGG...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539396.5
CDS-3UTR TCA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGATTGGAGACTTGTTCTaGCACATCTGCTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: WKAALIPGAAVRAQGETPIGDLF*HICFLL
Trigger: GAGAAGAAAGCAGATGTGTCAGAACAAGTCTCCAAT...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR TCA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCCTCCAAAGGGTTTATTaGGACAAGTTTTCACATACA +
Preference number: 4 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEALQRVY*DKFSHT
Trigger: TGTATGTGAAAACTTGTCTCAATAAACCCTTTGGAG...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGTATTTGGCCCTTTCCTaGTTCAGCGCATACTCTAGC +
Preference number: 4 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQYLALS*FSAYSS
Trigger: GCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATA...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp ATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTGACCCGACGGCTTTCTGCAGGGCGTTCCTCTTTATCTaGTCCTCGATCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: IPQVSQNALEFDPTAFCRAFLFI*SSICFT
Trigger: GGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGC...CCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACATTTGCCATCTTTGCCTaGCGCGTTCCTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTFAIFA*RVPLYL
Trigger: CAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAA...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp CACGCTGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTTTTGCCATCTTTGCCTaGCGCGTTCCTCTTTATCTG +
Preference number: 4 (lower is better)
Translates to: HAASCAARCPAHRPRRCLFAIFA*RVPLYL
Trigger: CAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAA...AAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp CTTTATCTGCTCCTCGATCTGTTTCACCAGCAGCGACTCCCCACCACTGAGCCCGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: LYLLLDLFHQQRLPTTEPALCHL*LPRSSL
Trigger: TAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGC...GGGCTCAGTGGTGGGGAGTCGCTGCTGGTGAAACAGATCGAGGAGCAGATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp CGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCAGACCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: RRVNLGFHVFLKASLLSDRPSAL*HLCLPR
Trigger: ACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCG...GTCTGACAGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR GCA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAAACCTCTTAGGACTCTaGACCAGGAGAAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTNLLGL*TRRRLL
Trigger: TAGCAACCTTCTCCTGGTGCAGAGTCCTAAGAGGTT...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539396.5
CDS-3UTR CCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGCTTTCTTCTCCCCCTaGTTCAGGTCTGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWAFFSP*FRSVPN
Trigger: GTTTGGGACAGACCTGAACCAGGGGGAGAAGAAAGC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGATTCCACGGGGCCATTaGAGACTTGTTCTGACACAT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRIPRGH*RLVLTH
Trigger: ATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAAT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp TGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTCGTCCATTCCACGGGGCCATTaGAGACTTGTTCTGACACAT +
Preference number: 4 (lower is better)
Translates to: CFLCCTLSSSSSSSLSSSIPRGH*RLVLTH
Trigger: ATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAAT...GGACGAAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CCA 90 bp CAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCAGACAGGGGAACGGACGCGCTTaGACCGCATGTCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: QGELGVPRLLKSIFAVRQGNGRA*TACRGW
Trigger: CCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCC...CTGTCTGACAGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp GGTCTGGAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTAGCAGTTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: GLESSNYGCRHLPRHCSSSARMP*SLTRRL
Trigger: AAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGA...ACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGGCCGACTGGCTGTGGTaGAAGGCCAGGGAACGAATG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGADWLW*KARERM
Trigger: CATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGC...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGGAATCTTCCAACTATaGATGCAGGCATCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKGIFQL*MQASAP
Trigger: CGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGAGGGAGGAGACTGACTaGGACCATCACACAGTGATA +
Preference number: 4 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWREETD*DHHTVI
Trigger: TATCACTGTGTGATGGTCTCAGTCAGTCTCCTCCCT...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAAGACAGGGAGGAGACTaGCTGAGACCATCACACAGT +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKRQGGD*LRPSHS
Trigger: ACTGTGTGATGGTCTCAGTCAGTCTCCTCCCTGTCT...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCAATTACTTTTACTCTaGGAGAAAGGGCGACCAGCA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRQLLLL*EKGRPA
Trigger: TGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391910.7
ENST00000539396.5
CDS-3UTR GCA 90 bp GTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTATGGATGCAGGCATCTaGCCCGCCACTGTAGCAGTA +
Preference number: 4 (lower is better)
Translates to: VRAQGELGVPRLLKSIFAMDAGI*PATVAV
Trigger: TACTGCTACAGTGGCGGGGCAGATGCCTGCATCCAT...AGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATCAGTTTATGATATTTaGCCCTTTCCTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPSVYDI*PFPASA
Trigger: CGCTGAAGCAGGAAAGGGCCAAATATCATAAACTGA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRTACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: VRAQGELGVPRLLKSIFATACRG*CLCSPP
Trigger: AGGTGGGCTACACAGACACCATCCTCGACATGCGGT...AGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGCACCAGAGCCTTGGATaGGAGCTTCACACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEHQSLG*ELHTLL
Trigger: AAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGTG...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCCAGGTGTGCAACCATaGAGTGCACCGGCTTACCTG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGPGVQP*SAPAYL
Trigger: CAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAACTGGCCTGGAAGCCTTaGTTAGTGTCTGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKLAWKP*LVSGKQ
Trigger: CTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAG...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAAGGGAGGAGACTGACTaGGACCATCACACAGTGATA +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKREETD*DHHTVI
Trigger: TATCACTGTGTGATGGTCTCAGTCAGTCTCCTCCCT...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGCTTTCTTCTCCCCCTaGTTCAGGTCTGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRAFFSP*FRSVPN
Trigger: GTTTGGGACAGACCTGAACCAGGGGGAGAAGAAAGC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCACCAGAGCCTTGGATaGGAGCTTCACACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGHQSLG*ELHTLL
Trigger: AAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGTG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTT +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRSARMP*SLTRRL
Trigger: AAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGA...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGATCCATGCTGAGGTCTaGAATCTTCCAACTATGGAT +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRIHAEV*NLPTMD
Trigger: ATCCATAGTTGGAAGATTCCAGACCTCAGCATGGAT...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAGGTGAGAGGCTGGTTTaGATGACTCACCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKGERLV*MTHHLV
Trigger: AACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACC...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGATCATACGAAGACCTTaGCCAGGGCATCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGIIRRP*PGHQRQ
Trigger: CTGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGAT...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGACTGGCCTGGAAGCCTTaGTTAGTGTCTGGAAAGCAG +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRLAWKP*LVSGKQ
Trigger: CTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAG...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCACAAACACCACTCTCCTaGACAATTACTTTTACTCTG +
Preference number: 4 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPQTPLS*TITFTL
Trigger: CAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTG...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CCA 90 bp CATGTCGAGGATGGTGTCTGTGTAGCCCACCTCTTCCAGGTACTTCTACAAATGGCTTTCTTCTCCCCCTaGTTCAGGTCTGTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: HVEDGVCVAHLFQVLLQMAFFSP*FRSVPN
Trigger: GTTTGGGACAGACCTGAACCAGGGGGAGAAGAAAGC...CATTTGTAGAAGTACCTGGAAGAGGTGGGCTACACAGACACCATCCTCGACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGGTGAGAGGCTGGTTTaGATGACTCACCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRGERLV*MTHHLV
Trigger: AACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGAGAGGCTGGTTTGGATaGCTCACCACTTGGTTGATC +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGRGWFG*LTTWLI
Trigger: GATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCT...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCTCCAAAGGGTTTATTaGGACAAGTTTTCACATACA +
Preference number: 4 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRLQRVY*DKFSHT
Trigger: TGTATGTGAAAACTTGTCTCAATAAACCCTTTGGAG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR TCA 90 bp CACGCTGCTTCTTGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCTTAGGTACTTCTACAAATaGGCACTTATTACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HAASCAARCPAHRPRRCLRYFYK*ALITSA
Trigger: TGCAGAAGTAATAAGTGCTCATTTGTAGAAGTACCT...AAGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR GCA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATATTTGGCCCTTTCCTaGTTCAGCGCATACTCTAGC +
Preference number: 4 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRYLALS*FSAYSS
Trigger: GCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATA...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAATCAGTTTATGATATTTaGCCCTTTCCTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKSVYDI*PFPASA
Trigger: CGCTGAAGCAGGAAAGGGCCAAATATCATAAACTGA...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATTCCACGGGGCCATTaGAGACTTGTTCTGACACAT +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEIPRGH*RLVLTH
Trigger: ATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAAT...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGTATTTGGCCCTTTCCTaGTTCAGCGCATACTCTAGC +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGYLALS*FSAYSS
Trigger: GCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATA...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGGCGTTCCTCTTTATCTaGTCCTCGATCTGTTTCACC +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGAFLFI*SSICFT
Trigger: GGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGC...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR GCA 90 bp CAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCAGACAGGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QGELGVPRLLKSIFAVRQALCHL*LPRSSL
Trigger: TAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGC...CTGTCTGACAGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAATCCATGCTGAGGTCTaGAATCTTCCAACTATGGAT +
Preference number: 4 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKIHAEV*NLPTMD
Trigger: ATCCATAGTTGGAAGATTCCAGACCTCAGCATGGAT...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATCCATGCTGAGGTCTaGAATCTTCCAACTATGGAT +
Preference number: 4 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEIHAEV*NLPTMD
Trigger: ATCCATAGTTGGAAGATTCCAGACCTCAGCATGGAT...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CCA 90 bp GTAGTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTTCAGTTTATGATATTTaGCCCTTTCCTGCTTCAGCG +
Preference number: 4 (lower is better)
Translates to: VVRAQGELGVPRLLKSIFSVYDI*PFPASA
Trigger: CGCTGAAGCAGGAAAGGGCCAAATATCATAAACTGA...AAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CCA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCAAACACCACTCTCCTaGACAATTACTTTTACTCTG +
Preference number: 4 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGQTPLS*TITFTL
Trigger: CAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR CCA 90 bp CAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCAGACAGCAAACACCACTCTCCTaGACAATTACTTTTACTCTG +
Preference number: 4 (lower is better)
Translates to: QGELGVPRLLKSIFAVRQQTPLS*TITFTL
Trigger: CAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTG...CTGTCTGACAGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCACCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: PSAPPARPYTPASVAARAPPKRS*PSLPAA
Trigger: CGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGG...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCTGGCAATGAGGGCCTaGCTGGGGTGGCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQLAMRA*LGWQAT
Trigger: TGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS-3UTR CAA 90 bp GCGAGCGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTGGCTCCACTGCCCCGTaGAGCTCCAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: ASGPAGNGRAWTACRGWCGSTAP*SSSERP
Trigger: GGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCC...ACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PSAPPARPYTPASVAARAFTRCF*CCTLSS
Trigger: GCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTCAGCCAGAATGCCTaGGAGTTTGACCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: PSAPPARPYTPASVAARAVSQNA*EFDPTA
Trigger: AGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGAC...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQLRSLS*VTVRSA
Trigger: GGCAGATCTCACCGTCACCAACGACAACGACCTCAG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATGCACGCACGTTTTGTaGTCCAGGCTCCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: PSAPPARPYTPASVAARACTHVL*SRLQRR
Trigger: GCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS CCA 90 bp CCGACTGGGTCCTCATCCTGTTCCCTCCTTGAGGCCAGCCAGAGCTaGACGCCCGCCCTGGAGGGCTGGCGGCCCCACTTCAGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: PTGSSSCSLLEASQS*TPALEGWRPHFRKS
Trigger: GCTCTTCCTGAAGTGGGGCCGCCAGCCCTCCAGGGCGGGCGTCCAGCTCTGGCTGGCCTCAAGGAGGGAACAGGATGAGGACCCAGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594357.6
CDS-3UTR CAA 90 bp AGGAGAAGCCAAAGGAACCTTCATGTGGCCGGGGCTGGGGTGTGCCAGGAGGCGGGCTCCACTGCCCCGTaGAGCTCCAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: RRSQRNLHVAGAGVCQEAGSTAP*SSSERP
Trigger: GGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCC...CGCCTCCTGGCACACCCCAGCCCCGGCCACATGAAGGTTCCTTTGGCTTCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQRSLPS*PAAFLF
Trigger: AAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCG...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGGAGCGCAGGGTGAACTaGGGGTTCCACGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQERRVN*GFHVFL
Trigger: TAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTC...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp ACCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCATGCACGCACGTTTTGTaGTCCAGGCTCCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: TSAPPARPYTPASVAARACTHVL*SRLQRR
Trigger: GCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCA...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CAA 90 bp CCCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGATTCCACGGGGCCATaGGAGACTTGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: PSAPPARPYTPASVAARADSTGP*ETCSDT
Trigger: TGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAATC...TGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGCTCCACTGCCCCGTaGAGCTCCAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPGSTAP*SSSERP
Trigger: GGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCC...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GAGCAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGGGCTCCACTGCCCCGTaGAGCTCCAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: EQSRLAVVEGQGTNAVVVGSTAP*SSSERP
Trigger: GGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCC...CACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGTGGATGACTCACCACTaGGTTGATCTGGGTTGGACC +
Preference number: 5 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQWMTHH*VDLGWT
Trigger: GGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCA...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000600615.5
CDS TCA 90 bp GGTGACTGCGTCCAGGTGTGCAACCATGGAGTGCACCGGCTTACCTaGGGCGAGAAGGGCGGGTGGCAGGTTCCCCTCCCACTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GDCVQVCNHGVHRLT*GEKGGWQVPLPLWA
Trigger: GGCCCAGAGTGGGAGGGGAACCTGCCACCCGCCCTTCTCGCCTCAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGGACGCAGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS CCA 90 bp GCCAGGGCATCAGCGCCAGCACTGGCAATGAGGGCCTTGCTGGGGTaGCAGGCAACAGCGTGGATGGCCTCCTCGTGCTTCTTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: ARASAPALAMRALLG*QATAWMASSCFLRW
Trigger: CCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGGCGCTGATGCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS-3UTR CAA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGGCTCCACTGCCCCGTaGAGCTCCAGCGAGCGGCCC +
Preference number: 5 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPGSTAP*SSSERP
Trigger: GGGCCGCTCGCTGGAGCTCAACGGGGCAGTGGAGCC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLPPKRS*PSLPAA
Trigger: CGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGCCTCCTCGTGCTTCTaGCGGTGGGCCGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAASSCF*RWAVIS
Trigger: GGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS TCA 90 bp GCCCGCTGTGGGGACCAGCCGTCCCACTGCATTCCGCCCAGGGTGTaGGAGAAATGTGCCACAGACACGACCCCGGGTTCCTGCCAAGCA +
Preference number: 5 (lower is better)
Translates to: ARCGDQPSHCIPPRV*EKCATDTTPGSCQA
Trigger: TGCTTGGCAGGAACCCGGGGTCGTGTCTGTGGCACATTTCTCTCACACCCTGGGCGGAATGCAGTGGGACGGCTGGTCCCCACAGCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS TCA 90 bp AGACACCGACACCCAGGGCTTGAGGGCCCCTGTCTTCCACCCACATaGCCCTGGCAGGAATGCCCTCAGAGCCTGGGCTCCAGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: RHRHPGLEGPCLPPT*PWQECPQSLGSSRE
Trigger: TTCCCGGCTGGAGCCCAGGCTCTGAGGGCATTCCTGCCAGGGTCATGTGGGTGGAAGACAGGGGCCCTCAAGCCCTGGGTGTCGGTGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS TCA 90 bp CGAGAAGGGCGGGTGGCAGGTTCCCCTCCCACTCTGGGCCTCGCCTaGGAGAGTGAAAGGACTGGACGAGAGACTCCCAGAGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: REGRVAGSPPTLGLA*ESERTGRETPRASH
Trigger: GTGGGAGGCTCTGGGAGTCTCTCGTCCAGTCCTTTCACTCTCTCAGGCGAGGCCCAGAGTGGGAGGGGAACCTGCCACCCGCCCTTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 90 bp TCCACGGCTAGGCAGGTGACTGCGTCCAGGTGTGCAACCATGGAGTaGACCGGCTTACCTGAGGCGAGAAGGGCGGGTGGCAGGTTCCCC +
Preference number: 5 (lower is better)
Translates to: STARQVTASRCATME*TGLPEARRAGGRFP
Trigger: GGGGAACCTGCCACCCGCCCTTCTCGCCTCAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 90 bp GCAGGAAGGGGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGTTCCCAGCCTGACTGCGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: AGRGSAPALSRPSAL*HLCLPRSQPDCGRR
Trigger: CCTTCTCCCGCAGTCAGGCTGGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CCA 90 bp CCAGCACTGGCAATGAGGGCCTTGCTGGGGTGGCAGGCAACAGCGTaGATGGCCTCCTCGTGCTTCTTGCGGTGGGCCGTGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PALAMRALLGWQATA*MASSCFLRWAVISC
Trigger: GCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS-3UTR CAA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCAGCGCCGCATTCTTCTaGGCCGTGACCGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEASAAFF*AVTAFC
Trigger: GCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCT...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAGCGCCGCATTCTTCTaGGCCGTGACCGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLSAAFF*AVTAFC
Trigger: GCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCCTGGCAATGAGGGCCTaGCTGGGGTGGCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEALAMRA*LGWQAT
Trigger: TGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAG...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS GCA 90 bp CCTCCAACACCACGGCCTGCGCCTCTGTGCACACACACTCACTGCTaGACTCACTGCAGGCCTCACCCTTCACCCCCACAGCGACCTCCA +
Preference number: 5 (lower is better)
Translates to: PPTPRPAPLCTHTHC*THCRPHPSPPQRPP
Trigger: TGGAGGTCGCTGTGGGGGTGAAGGGTGAGGCCTGCAGTGAGTGCAGCAGTGAGTGTGTGTGCACAGAGGCGCAGGCCGTGGTGTTGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS GCA 90 bp CAGCCTCCAACACCACGGCCTGCGCCTCTGTGCACACACACTCACTaGTGCACTCACTGCAGGCCTCACCCTTCACCCCCACAGCGACCT +
Preference number: 5 (lower is better)
Translates to: QPPTPRPAPLCTHTH*CTHCRPHPSPPQRP
Trigger: AGGTCGCTGTGGGGGTGAAGGGTGAGGCCTGCAGTGAGTGCAGCAGTGAGTGTGTGTGCACAGAGGCGCAGGCCGTGGTGTTGGAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEPPKRS*PSLPAA
Trigger: CGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGGCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: GPVTFGGSPSTSRRSARMPPKRS*PSLPAA
Trigger: CGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGG...CATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp CTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTAGCGCCGCATTCTTCTaGGCCGTGACCGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LAVVEGQGTNAVVVRAQGSAAFF*AVTAFC
Trigger: GCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCT...ACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCGGCTTACCTGTCCGATaGTCCAGGAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEAGLPVR*SRKRMP
Trigger: GGGCATCCGCTTCCTGGACAATCGGACAGGTAAGCC...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGCCTCCTCGTGCTTCTaGCGGTGGGCCGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEASSCF*RWAVIS
Trigger: GGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp ACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGGCCTCCTCGTGCTTCTaGCGGTGGGCCGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: TAGLSTPGSTRHGRAETQASSCF*RWAVIS
Trigger: GGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGC...CTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS TCA 90 bp GTCTTCGTCCTCGCAGTTCTGCAGGAAGGGGATCTGCCCCAGCACTaGGCCGCCCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCC +
Preference number: 5 (lower is better)
Translates to: VFVLAVLQEGDLPQH*AAQALFAIFACRVP
Trigger: GGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCAGAACTGCGAGGACGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS GCA 90 bp GCGTGGATGGCCTCCTCGTGCTTCTTGCGGTGGGCCGTGATCTCCTaGACGCACGTTTTGTTGTCCAGGCTCCAGAGACGCAGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: AWMASSCFLRWAVIS*THVLLSRLQRRREQ
Trigger: CTGCTCCCTGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS GCA 90 bp AGGGCCTTGCTGGGGTGGCAGGCAACAGCGTGGATGGCCTCCTCGTaGTTCTTGCGGTGGGCCGTGATCTCCTGCACGCACGTTTTGTTG +
Preference number: 5 (lower is better)
Translates to: RALLGWQATAWMASS*FLRWAVISCTHVLL
Trigger: CAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS GCA 90 bp TTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGGCCTCTaGACCTCCAGCGAGGCTGGGAGTCCCCTGCGGGAAAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: LAPPGSMANRQRPGL*TSSEAGSPLREREG
Trigger: CCCTTCTCTTTCCCGCAGGGGACTCCCAGCCTCGCTGGAGGTGCAGAGGCCTGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS CCA 90 bp GGGTGGCAGGCAACAGCGTGGATGGCCTCCTCGTGCTTCTTGCGGTaGGCCGTGATCTCCTGCACGCACGTTTTGTTGTCCAGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: GWQATAWMASSCFLR*AVISCTHVLLSRLQ
Trigger: CTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS-3UTR CAA 90 bp GCGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGCATACTCTAGCATCTaGATCCGCCGCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AAQQGTDALGPHVEDGVCAYSSI*IRRTRS
Trigger: GGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGC...ACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCAGGGAACGGACGCGCTaGGACCGCATGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGRERTR*DRMSRM
Trigger: CATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCT...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGGAACGGACGCGCTaGGACCGCATGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: WKAALIPGAAVRAQGETPRERTR*DRMSRM
Trigger: CATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCT...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCAGGGAACGGACGCGCTaGGACCGCATGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: ASHFWGQPIHIPQVSQNARERTR*DRMSRM
Trigger: CATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCT...GGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp GCGAGCGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ASGPAGNGRAWTACRGWCRSLPS*PAAFLF
Trigger: AAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCG...ACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp GTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTTTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: VPELERAVLGGGEQSRLAFTRCF*CCTLSS
Trigger: GCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAA...AGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTCGGGCACCAGAGCCTaGGATGGGAGCTTCACACGC +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPSGTRA*DGSFTR
Trigger: GCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCGA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGATCGGGCACCAGAGCCTaGGATGGGAGCTTCACACGC +
Preference number: 5 (lower is better)
Translates to: QSRLAVVEGQGTNAVVVRSGTRA*DGSFTR
Trigger: GCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCGA...TCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAATCGGGCACCAGAGCCTaGGATGGGAGCTTCACACGC +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGESGTRA*DGSFTR
Trigger: GCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCGA...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCTCAGCCCCACCTGCCCGGCCCTACACCCCAGCCAGCGTGGCGGCCAGGGCAGAGGAAATCAAACTCATaGATAGCATCCTCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: PQPHLPGPTPQPAWRPGQRKSNS*IASSES
Trigger: CGACTCTGAGGATGCTATCAATGAGTTTGATTTCCT...CTGCCCTGGCCGCCACGCTGGCTGGGGTGTAGGGCCGGGCAGGTGGGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGCGGGCCAGTCACTTTaGGGGGCAGCCCATCCACAT +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEAGQSL*GAAHPH
Trigger: ATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTTCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGA +
Preference number: 5 (lower is better)
Translates to: VPELERAVLGGGEQSRLASQLRS*SLVTVR
Trigger: TCTCACCGTCACCAACGACAACGACCTCAGCTGCGA...AGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAAC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp AGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGGCCTCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SSSDTRSGCQGTGGNPEASQLRS*SLVTVR
Trigger: TCTCACCGTCACCAACGACAACGACCTCAGCTGCGA...GGCCTCGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGATGCAGGTTCCAGAGCTaGAGCGTGCCGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: QSRLAVVEGQGTNAVVVRCRFQS*SVPSSE
Trigger: CTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCA...TCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTGCAGGTTCCAGAGCTaGAGCGTGCCGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPCRFQS*SVPSSE
Trigger: CTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAAGCGCCGCATTCTTCTaGGCCGTGACCGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: QSRLAVVEGQGTNAVVVRSAAFF*AVTAFC
Trigger: GCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCT...TCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCCGGCTTACCTGTCCGATaGTCCAGGAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: GMGVQRLRMRGFCPHLSPGLPVR*SRKRMP
Trigger: GGGCATCCGCTTCCTGGACAATCGGACAGGTAAGCC...GGGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CAA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCATCAGGAATGCGCCGTaGGGGTCCACGGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGIRNAP*GSTARQ
Trigger: CTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGAT...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp ACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGATCAGGAATGCGCCGTaGGGGTCCACGGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: TAGLSTPGSTRHGRAETQIRNAP*GSTARQ
Trigger: CTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGAT...CTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CAA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCTGGCAATGAGGGCCTaGCTGGGGTGGCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGLAMRA*LGWQAT
Trigger: TGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp ACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGGGCGTGCAGAGACTCAGCTGGCAATGAGGGCCTaGCTGGGGTGGCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: TAGLSTPGSTRHGRAETQLAMRA*LGWQAT
Trigger: TGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAG...CTGAGTCTCTGCACGCCCATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS TCA 90 bp ATGCCCCTGTCGTCGTGGGCGGTGATGGTGAGAGGCTGGTTTGGATaGCTCACCACTTGGTTGATCTGGGTTGGACCGCTGCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: MPLSSWAVMVRGWFG*LTTWLIWVGPLLPR
Trigger: CCGGGGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACCATCACCGCCCACGACGACAGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS TCA 90 bp GCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTaGCCCGACGGCTTTCTGCAGGGTCGAGGCATAGGGCCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: AAHPHPAGQPECLGV*PDGFLQGRGIGPES
Trigger: TGACTCCGGCCCTATGCCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000601631.6
CDS TCA 90 bp TTCGCATCCATCCCAGCAGTCATGCAGACACCGACACCCAGGGCTTaGGGGCCCCTGTCTTCCACCCACATGACCCTGGCAGGAATGCCC +
Preference number: 5 (lower is better)
Translates to: FASIPAVMQTPTPRA*GPLSSTHMTLAGMP
Trigger: GGGCATTCCTGCCAGGGTCATGTGGGTGGAAGACAGGGGCCCTCAAGCCCTGGGTGTCGGTGTCTGCATGACTGCTGGGATGGATGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS GCA 90 bp AAAGGCCTCAGGGGAAGTGGGGCTCAACTCTCCTCTCTCACCCTCTaGTCATCACCTCCTGTGGCCCGCCCAAAGGAGAACCCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: KGLRGSGAQLSSLTL*SSPPVARPKENPGP
Trigger: GGGACCAGGGTTCTCCTTTGGGCGGGCCACAGGAGGTGATGAGCAGAGGGTGAGAGAGGAGAGTTGAGCCCCACTTCCCCTGAGGCCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS GCA 90 bp GGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTGCCAAAGACAGCAGAGCAGAGGAGGCATG +
Preference number: 5 (lower is better)
Translates to: GSAPALSRPSALCHL*LPRSCQRQQSRGGM
Trigger: CATGCCTCCTCTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS GCA 90 bp GCAGGAAGGGGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTTaGCATCTTTGCCTGCCGCGTTCCTGCCAAAGACAGCAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: AGRGSAPALSRPSAL*HLCLPRSCQRQQSR
Trigger: TCTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS CCA 90 bp AGCGGCCCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATaGTGTCTGTGTAGCCCACCTCTTCCAGGTACTGTCGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: SGPAGNGRAWTACRG*CLCSPPLPGTVGEA
Trigger: AGCTTCTCCGACAGTACCTGGAAGAGGTGGGCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGGGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000593979.6
ENST00000597021.6
ENST00000597063.6
ENST00000600358.7
CDS CCA 90 bp GCGGATGCCCCTGTCGTCGTGGGCGGTGATGGTGAGAGGCTGGTTTaGATGACTCACCACTTGGTTGATCTGGGTTGGACCGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: ADAPVVVGGDGERLV*MTHHLVDLGWTAAA
Trigger: GGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACCATCACCGCCCACGACGACAGGGGCATCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS CCA 90 bp TTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTTTCTGCCTCTCCCCGACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: FGGSPSTSRRSARMP*SLTRRLSASPRLGP
Trigger: AGGACCCAGTCGGGGAGAGGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594357.6
ENST00000602223.5
CDS CCA 90 bp CCTGAGCCAGAGCATCTGTCTCTGGGAGGCGTGGGAAGCTACTTCTaGAGCTTAGGGACAAGAGTGGGTGGCTCGGCTCGGCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: PEPEHLSLGGVGSYF*SLGTRVGGSARLLL
Trigger: GAGCAGGAGCCGAGCCGAGCCACCCACTCTTGTCCCTAAGCTCCAGAAGTAGCTTCCCACGCCTCCCAGAGACAGATGCTCTGGCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS-3UTR CAA 90 bp CGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCAGGGAACGGACGCGCTaGGACCGCATGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: RILLGRDRLLQVPELERARERTR*DRMSRM
Trigger: CATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCT...GGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLRSLPS*PAAFLF
Trigger: AAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCG...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGCCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: STSSAAFFLAVTAFCRFQPPKRS*PSLPAA
Trigger: CGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGG...CTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTTCGGGCACCAGAGCCTaGGATGGGAGCTTCACACGC +
Preference number: 5 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVSGTRA*DGSFTR
Trigger: GCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCGA...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCAGCGGGCCAGTCACTTTaGGGGGCAGCCCATCCACAT +
Preference number: 5 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPAGQSL*GAAHPH
Trigger: ATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGC...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGCGGGCCAGTCACTTTaGGGGGCAGCCCATCCACAT +
Preference number: 5 (lower is better)
Translates to: RILLGRDRLLQVPELERAAGQSL*GAAHPH
Trigger: ATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGC...GGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATGCAGGTTCCAGAGCTaGAGCGTGCCGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPCRFQS*SVPSSE
Trigger: CTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCTGCAGGTTCCAGAGCTaGAGCGTGCCGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: RILLGRDRLLQVPELERACRFQS*SVPSSE
Trigger: CTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCA...GGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCCGTGGCTCAGCACGCTaGGGTCGTAGCCATCATAGG +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPRGSAR*GRSHHR
Trigger: CCTATGATGGCTACGACCCAAGCGTGCTGAGCCACG...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAGGCTTACCTGTCCGATaGTCCAGGAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGEGLPVR*SRKRMP
Trigger: GGGCATCCGCTTCCTGGACAATCGGACAGGTAAGCC...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGGCTTACCTGTCCGATaGTCCAGGAAGCGGATGCCC +
Preference number: 5 (lower is better)
Translates to: WKAALIPGAAVRAQGETPGLPVR*SRKRMP
Trigger: GGGCATCCGCTTCCTGGACAATCGGACAGGTAAGCC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCTCCTGCACGCACGTTTaGTTGTCCAGGCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLSCTHV*LSRLQR
Trigger: TCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGA...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp AGGACGCCCCTGACTGGACTGCGGGGCTCAGCACACCTGGCAGTACTAGGCATGCATCATACGAAGACCTaGGCCAGGGCATCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: RTPLTGLRGSAHLAVLGMHHTKT*ARASAP
Trigger: TGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGATG...CATGCCTAGTACTGCCAGGTGTGCTGAGCCCCGCAGTCCAGTCAGGGGCGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS TCA 90 bp TTCCTGACATCAGGAATGCGCCGTTGGGGTCCACGGCTAGGCAGGTaGCTGCGTCCAGGTGTGCAACCATGGAGTGCACCGGCTTACCTG +
Preference number: 5 (lower is better)
Translates to: FLTSGMRRWGPRLGR*LRPGVQPWSAPAYL
Trigger: CAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGATGTCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS TCA 90 bp AGGCAACAGCGTGGATGGCCTCCTCGTGCTTCTTGCGGTGGGCCGTaGTCTCCTGCACGCACGTTTTGTTGTCCAGGCTCCAGAGACGCA +
Preference number: 5 (lower is better)
Translates to: RQQRGWPPRASCGGP*SPARTFCCPGSRDA
Trigger: TGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS GCA 90 bp GCATGTCGAGGATGGTGTCTGTGTAGCCCACCTCTTCCAGGTACCTaGAGGGGTGCAGAGCCACGTGGGTCAGACATCCCCTGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: ACRGWCLCSPPLPGT*RGAEPRGSDIPWAS
Trigger: AGAAGCCCAGGGGATGTCTGACCCACGTGGCTCTGCACCCCTGCAGGTACCTGGAAGAGGTGGGCTACACAGACACCATCCTCGACATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594847.6
CDS CCA 90 bp CCTGAGCCAGAGCATCTGTCTCTGGGAGGCGTGGGAAGCTACTTCTaGAGCTTAGGGACAAGAGTGGGTGGCTCGGCTCGGCTCCCTTTC +
Preference number: 5 (lower is better)
Translates to: PEPEHLSLGGVGSYF*SLGTRVGGSARLPF
Trigger: GAAAGGGAGCCGAGCCGAGCCACCCACTCTTGTCCCTAAGCTCCAGAAGTAGCTTCCCACGCCTCCCAGAGACAGATGCTCTGGCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597063.6
CDS-3UTR CAA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGCATACTCTAGCATCTaGATCCGCCGCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WKAALIPGAAVRAQGETPAYSSI*IRRTRS
Trigger: GGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GTTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGATTCCACGGGGCCATaGGAGACTTGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: VPELERAVLGGGEQSRLADSTGP*ETCSDT
Trigger: TGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAATC...AGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp GCCGCCCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCAGGGAACGGACGCGCTaGGACCGCATGTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: AAQALFAIFACRVPLYLLRERTR*DRMSRM
Trigger: CATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCT...GAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp GAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: EPTGCGGRPGNECRRSASRSLPS*PAAFLF
Trigger: AAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCG...GCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCTTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGFTRCF*CCTLSS
Trigger: GCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAA...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CCAGCAGGGAACGGACGCGCTTGGACCGCATGTCGAGGATGGTGTCTGTGTAGCTTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: PAGNGRAWTACRGWCLCSFTRCF*CCTLSS
Trigger: GCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAA...GCTACACAGACACCATCCTCGACATGCGGTCCAAGCGCGTCCGTTCCCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGCGGGCCAGTCACTTTaGGGGGCAGCCCATCCACAT +
Preference number: 5 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTAGQSL*GAAHPH
Trigger: ATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGC...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAACTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGELRSLS*VTVRSA
Trigger: GGCAGATCTCACCGTCACCAACGACAACGACCTCAG...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGTCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGA +
Preference number: 5 (lower is better)
Translates to: WKAALIPGAAVRAQGETPSQLRS*SLVTVR
Trigger: TCTCACCGTCACCAACGACAACGACCTCAGCTGCGA...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGAGCGCAGGGTGAACTaGGGGTTCCACGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: EPTGCGGRPGNECRRSASERRVN*GFHVFL
Trigger: TAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTC...GCTCGCACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGTGCAGGTTCCAGAGCTaGAGCGTGCCGTCCTCGGAG +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRCRFQS*SVPSSE
Trigger: CTCCGAGGACGGCACGCTCAAGCTCTGGAACCTGCA...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGATCAGGAATGCGCCGTaGGGGTCCACGGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQIRNAP*GSTARQ
Trigger: CTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGAT...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCTGCACGCACGTTTTGTaGTCCAGGCTCCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPCTHVL*SRLQRR
Trigger: GCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCA...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGCATGGGCGTGCAGAGACTCAGAATGCGGGGTTTCTGCCCTCACCTCAGCCCCTCCTGCACGCACGTTTaGTTGTCCAGGCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GMGVQRLRMRGFCPHLSPSCTHV*LSRLQR
Trigger: TCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGA...GGGGCTGAGGTGAGGGCAGAAACCCCGCATTCTGAGTCTCTGCACGCCCATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600615.5
CDS-3UTR CAA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGGCTGCCCTAGGAGTGTaGGGCAATCCCTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQAALGV*GNPWPG
Trigger: TCCAGGCCAGGGATTGCCCAACACTCCTAGGGCAGC...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp GGGCCAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTGGGAAGTGGAGATaGCAGTGGGCCAAGATCGTG +
Preference number: 5 (lower is better)
Translates to: GPVTFGGSPSTSRRSARMPGKWR*QWAKIV
Trigger: CACGATCTTGGCCCACTGCAATCTCCACTTCCCAGG...CATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS TCA 90 bp GAAGCTGCCGCCCCTCCTTCCACACCAACGGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCATTGGAGACTTGTTCTGACACATCTG +
Preference number: 5 (lower is better)
Translates to: EAAAPPSTPTGCSPG*PIPRGHWRLVLTHL
Trigger: CAGATGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCCCGTTGGTGTGGAAGGAGGGGCGGCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000593979.6
ENST00000594704.5
ENST00000596012.2
ENST00000597021.6
ENST00000597063.6
ENST00000600710.1
CDS TCA 90 bp GGACACAGGACTCCATTCTCACCGGCCTTCCTCCCACAACGACACTaGCACGCCGCACAGGCTCAGCCTCTTTCTCAGCTTCCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: GHRTPFSPAFLPQRH*HAAQAQPLSQLPPP
Trigger: AGGAGGAGGAAGCTGAGAAAGAGGCTGAGCCTGTGCGGCGTGTCAGTGTCGTTGTGGGAGGAAGGCCGGTGAGAATGGAGTCCTGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS GCA 90 bp ACGGCTGCCATCACCAGAGCTCCACTCCATCCTCAGAACACTCGCTaGACTTGCAGCGGGACACAGGACTCCATTCTCACCGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: TAAITRAPLHPQNTR*TCSGTQDSILTGLP
Trigger: AGGAAGGCCGGTGAGAATGGAGTCCTGTGTCCCGCTGCAAGTGCAGCGAGTGTTCTGAGGATGGAGTGGAGCTCTGGTGATGGCAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS GCA 90 bp AACGGGTGCAGAGGTCACTGCAGATGTACCCTCTCGCCTCACGGCTaGCATCACCAGAGCTCCACTCCATCCTCAGAACACTCGCTGCAC +
Preference number: 5 (lower is better)
Translates to: NGCRGHCRCTLSPHG*HHQSSTPSSEHSLH
Trigger: GTGCAGCGAGTGTTCTGAGGATGGAGTGGAGCTCTGGTGATGGCAGCCGTGAGGCGAGAGGGTACATCTGCAGTGACCTCTGCACCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS-3UTR CAA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTGCATACTCTAGCATCTaGATCCGCCGCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVAYSSI*IRRTRS
Trigger: GGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGC...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp GCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGATCTGCCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCG +
Preference number: 5 (lower is better)
Translates to: ALFAIFACRVPLYLLLDLPPKRS*PSLPAA
Trigger: CGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGG...CAGATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPFTRCF*CCTLSS
Trigger: GCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAAGAATGCCTTGGAGTTaGACCCGACGGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: ALWKAALIPGAAVRAQGERMPWS*TRRLSS
Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTCT...TTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGAGAATGCCTTGGAGTTaGACCCGACGGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: WKAALIPGAAVRAQGETPRMPWS*TRRLSS
Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTCT...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GAAGGCCAGGGAACGAATGCCGTCGTAGTGCGAGCGCAGGGTGAACTTGGGGTTCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: EGQGTNAVVVRAQGELGVLRSLS*VTVRSA
Trigger: GGCAGATCTCACCGTCACCAACGACAACGACCTCAG...AACCCCAAGTTCACCCTGCGCTCGCACTACGACGGCATTCGTTCCCTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: RRILLGRDRLLQVPELERLRSLS*VTVRSA
Trigger: GGCAGATCTCACCGTCACCAACGACAACGACCTCAG...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTGCCGTCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGA +
Preference number: 5 (lower is better)
Translates to: AFFLAVTAFCRFQSLSVPSQLRS*SLVTVR
Trigger: TCTCACCGTCACCAACGACAACGACCTCAGCTGCGA...CGGCACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCGTGGCTCAGCACGCTaGGGTCGTAGCCATCATAGG +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRRGSAR*GRSHHR
Trigger: CCTATGATGGCTACGACCCAAGCGTGCTGAGCCACG...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGCCTCCTCGTGCTTCTaGCGGTGGGCCGTGATCTCC +
Preference number: 5 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKASSCF*RWAVIS
Trigger: GGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp TGGCTGTGCTGCCCTCTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCCCTGGCCTGGAAGCCTaGGTTAGTGTCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: WLCCPLESSSDTRSGCQGPGLEA*VSVWKA
Trigger: TGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGG...GCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAGAGGGCAGCACAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCCCCTCGCTTCCACCTTaGTGGTTATGGAGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPPSLPP*WLWSPK
Trigger: TTTGGGGCTCCATAACCACAAAGGTGGAAGCGAGGG...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539396.5
CDS GCA 90 bp TGGAGGTCTTGTCAACTGCCAGTTACCAACGGGTGCAGAGGTCACTaGAGATGTACCCTCTCGCCTCACGGCTGCCATCACCAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: WRSCQLPVTNGCRGH*RCTLSPHGCHHQSS
Trigger: GGAGCTCTGGTGATGGCAGCCGTGAGGCGAGAGGGTACATCTGCAGTGACCTCTGCACCCGTTGGTAACTGGCAGTTGACAAGACCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CCA 90 bp TCGGCTCCTGCTCCAATAGAAAAGCTTTACAAGCCAAGCCCGCTGTaGGGACCAGCCGTCCCACTGCATTCCGCCCAGGGTGTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: SAPAPIEKLYKPSPL*GPAVPLHSAQGVRE
Trigger: TTCTCTCACACCCTGGGCGGAATGCAGTGGGACGGCTGGTCCCCACAGCGGGCTTGGCTTGTAAAGCTTTTCTATTGGAGCAGGAGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS-3UTR CAA 90 bp TGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGGATTCCACGGGGCCATaGGAGACTTGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: WKAALIPGAAVRAQGETPDSTGP*ETCSDT
Trigger: TGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAATC...CGGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp AGGTCAGCCAGAATGCCTTGGAGTTTGACCCGACGGCTTTCTGCAGGGTCGAGGTTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGC +
Preference number: 5 (lower is better)
Translates to: RSARMPWSLTRRLSAGSRFTRCF*CCTLSS
Trigger: GCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAA...CCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS-3UTR CAA 90 bp CGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCAGAGCTTGAGCGTAGAATGCCTTGGAGTTaGACCCGACGGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RRILLGRDRLLQVPELERRMPWS*TRRLSS
Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTCT...ACGCTCAAGCTCTGGAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGTCAGCCAGAATGCCTaGGAGTTTGACCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRVSQNA*EFDPTA
Trigger: AGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGAC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCC +
Preference number: 5 (lower is better)
Translates to: GFLGKGPLAPPGSMANRQLRSLS*VTVRSA
Trigger: GGCAGATCTCACCGTCACCAACGACAACGACCTCAG...CTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGTCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGA +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRSQLRS*SLVTVR
Trigger: TCTCACCGTCACCAACGACAACGACCTCAGCTGCGA...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAAGCGCCGCATTCTTCTaGGCCGTGACCGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKSAAFF*AVTAFC
Trigger: GCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCT...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGTGCACGCACGTTTTGTaGTCCAGGCTCCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRCTHVL*SRLQRR
Trigger: GCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCA...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp CTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGCCATCCTGCACGCACGTTTaGTTGTCCAGGCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LGKGPLAPPGSMANRQRPSCTHV*LSRLQR
Trigger: TCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGA...TGGCCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACACATCATACGAAGACCTaGGCCAGGGCATCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTHHTKT*ARASAP
Trigger: TGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGATG...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGCTGCCCTAGGAGTGTaGGGCAATCCCTGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWAALGV*GNPWPG
Trigger: TCCAGGCCAGGGATTGCCCAACACTCCTAGGGCAGC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS TCA 90 bp CGTGGCTCAGCACGCTTGGGTCGTAGCCATCATAGGGATCCATGCTaGGGTCTGGAATCTTCCAACTATGGATGCAGGCATCTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RGSARLGRSHHRDPC*GLESSNYGCRHLPR
Trigger: GCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACCTCAGCATGGATCCCTATGATGGCTACGACCCAAGCGTGCTGAGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000598074.1
ENST00000601631.6
CDS TCA 90 bp TGGGCAACAGGAAGAGAAAGAAGAAAGCAACCCAGCCGGTCAGTGTaGGGACAGAATGGCCCCAGGAGGAATGCAGGGAGCCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: WATGRERRKQPSRSV*GQNGPRRNAGSLPG
Trigger: GCCTGGAAGGCTCCCTGCATTCCTCCTGGGGCCATTCTGTCCTCACACTGACCGGCTGGGTTGCTTTCTTCTTTCTCTTCCTGTTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS GCA 90 bp AGGTTGATGCCCTGGAGGTCTTGTCAACTGCCAGTTACCAACGGGTaGAGAGGTCACTGCAGATGTACCCTCTCGCCTCACGGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: RLMPWRSCQLPVTNG*RGHCRCTLSPHGCH
Trigger: ATGGCAGCCGTGAGGCGAGAGGGTACATCTGCAGTGACCTCTGCACCCGTTGGTAACTGGCAGTTGACAAGACCTCCAGGGCATCAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS-3UTR CAA 90 bp GGTTCCACATCTAGCGCCGCATTCTTCTTGGCCGTGACCGCCTTCTGCAGGTTCCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GSTSSAAFFLAVTAFCRFRSLPS*PAAFLF
Trigger: AAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCG...GAACCTGCAGAAGGCGGTCACGGCCAAGAAGAATGCGGCGCTAGATGTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAATCGGGCACCAGAGCCTaGGATGGGAGCTTCACACGC +
Preference number: 5 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKSGTRA*DGSFTR
Trigger: GCGTGTGAAGCTCCCATCCAAGGCTCTGGTGCCCGA...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGGAGCGCAGGGTGAACTaGGGGTTCCACGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRERRVN*GFHVFL
Trigger: TAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTC...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACAGAGGTCCTGCACGCACGTTTaGTTGTCCAGGCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: FLGKGPLAPPGSMANRQRSCTHV*LSRLQR
Trigger: TCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGA...CCTCTGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS CCA 90 bp GAAGCGCGCCCACTCGTGCCCTTCCACACCCAAACACCACTCTCCTaGACAATTACTTTTACTCTGAGAGAAAGGGCGACCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: EARPLVPFHTQTPLS*TITFTLRERATSSG
Trigger: GCCACTGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTGGGTGTGGAAGGGCACGAGTGGGCGCGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539396.5
ENST00000600710.1
CDS CCA 90 bp AAGAGAAAGAAGAAAGCAACCCAGCCGGTCAGTGTGAGGACAGAATaGCCCCAGGAGGAATGCAGGGAGCCTTCCAGGCAGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: KRKKKATQPVSVRTE*PQEECREPSRQKDR
Trigger: CCTGTCCTTCTGCCTGGAAGGCTCCCTGCATTCCTCCTGGGGCCATTCTGTCCTCACACTGACCGGCTGGGTTGCTTTCTTCTTTCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS CCA 90 bp GGGAGGCGTGGGAAGCTACTTCTGGAGCTTAGGGACAAGAGTGGGTaGCTCGGCTCGGCTCCTGCTCCAATAGAAAAGCTTTACAAGCCA +
Preference number: 5 (lower is better)
Translates to: GRRGKLLLELRDKSG*LGSAPAPIEKLYKP
Trigger: TGGCTTGTAAAGCTTTTCTATTGGAGCAGGAGCCGAGCCGAGCCACCCACTCTTGTCCCTAAGCTCCAGAAGTAGCTTCCCACGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS-3UTR CAA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGCATACTCTAGCATCTaGATCCGCCGCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWAYSSI*IRRTRS
Trigger: GGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp GGCAGCCGTTGGGGAGGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCAGGAAATCAAACTCATaGATAGCATCCTCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: GSRWGGIPGERAVSTTRLRKSNS*IASSES
Trigger: CGACTCTGAGGATGCTATCAATGAGTTTGATTTCCT...GAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCCTCCCCAACGGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TTCCAGAGCTTGAGCGTGCCGTCCTCGGAGGCGGTGAGCAGAGCCGACTGGCTGAGGAAATCAAACTCATaGATAGCATCCTCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: FQSLSVPSSEAVSRADWLRKSNS*IASSES
Trigger: CGACTCTGAGGATGCTATCAATGAGTTTGATTTCCT...CAGCCAGTCGGCTCTGCTCACCGCCTCCGAGGACGGCACGCTCAAGCTCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp AGTGTTGGGCAATCCCTGGCCTGGAAGCCTTGGTTAGTGTCTGGAAAGCAGTGGGTCAGCCAGAATGCCTaGGAGTTTGACCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: SVGQSLAWKPWLVSGKQWVSQNA*EFDPTA
Trigger: AGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGAC...CCACTGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGGGATTGCCCAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp GTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGCGGGCCAGTCACTTTaGGGGGCAGCCCATCCACAT +
Preference number: 5 (lower is better)
Translates to: VRAQGELGVPRLLKSIFAAGQSL*GAAHPH
Trigger: ATGTGGATGGGCTGCCCCCAAAAGTGACTGGCCCGC...AGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GGGATTCCTGGGGAAAGGGCCGTTAGCACCACCAGGCTCCATGGCAAACAGACATGGATGACTCACCACTaGGTTGATCTGGGTTGGACC +
Preference number: 5 (lower is better)
Translates to: GIPGERAVSTTRLHGKQTWMTHH*VDLGWT
Trigger: GGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCA...TGTCTGTTTGCCATGGAGCCTGGTGGTGCTAACGGCCCTTTCCCCAGGAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
CDS-3UTR CAA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGATCAGGAATGCGCCGTaGGGGTCCACGGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEIRNAP*GSTARQ
Trigger: CTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGAT...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp CAGTCACTTTTGGGGGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTAGAATGCCTTGGAGTTaGACCCGACGGCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: QSLLGAAHPHPAGQPECLRMPWS*TRRLSA
Trigger: TGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCT...AAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCCCCCAAAAGTGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS CCA 90 bp CAGCACGCTTGGGTCGTAGCCATCATAGGGATCCATGCTGAGGTCTaGAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTA +
Preference number: 5 (lower is better)
Translates to: QHAWVVAIIGIHAEV*NLPTMDAGICPATV
Trigger: TACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACCTCAGCATGGATCCCTATGATGGCTACGACCCAAGCGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000598074.1
ENST00000601631.6
CDS-3UTR CAA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAAGAGCGCAGGGTGAACTaGGGGTTCCACGTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKERRVN*GFHVFL
Trigger: TAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTC...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp CTGGAAAGCAGCTCTGATACCAGGAGCGGCTGTCAGGGCACAGGGGGAAACCCCGCACCTTCTGGAGTCTaGGAAAAACTGATCCCTAAA +
Preference number: 5 (lower is better)
Translates to: LESSSDTRSGCQGTGGNPAPSGV*EKLIPK
Trigger: TTTAGGGATCAGTTTTTCCAAGACTCCAGAAGGTGC...GGGGTTTCCCCCTGTGCCCTGACAGCCGCTCCTGGTATCAGAGCTGCTTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp GGGGCTTATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACCTGGCCTGGAAGCCTaGGTTAGTGTCTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: GAYKQEPGRGPRVQGRTKPGLEA*VSVWKA
Trigger: TGCTTTCCAGACACTAACCAAGGCTTCCAGGCCAGG...TTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATAAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS CCA 90 bp AAGGAAGGCCACCTGAGCCCCTTCCACACCCAAACACCACTCTCCTaGACAATTACTTTTACTCTGAGAGAAAGGGCGACCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: KEGHLSPFHTQTPLS*TITFTLRERATSSG
Trigger: GCCACTGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTGGGTGTGGAAGGGGCTCAGGTGGCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593979.6
CDS-3UTR CAA 90 bp ATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGCATACTCTAGCATCTaGATCCGCCGCACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: INRNLEGDRGCRVEPNKRAYSSI*IRRTRS
Trigger: GGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGC...TCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp TGCCTGCCGCGTTCCTCTTTATCTGCTCCTCGATCTGTTTCACCAGCAGCGACTGATTCCACGGGGCCATaGGAGACTTGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: CLPRSSLSAPRSVSPAATDSTGP*ETCSDT
Trigger: TGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAATC...AGTCGCTGCTGGTGAAACAGATCGAGGAGCAGATAAAGAGGAACGCGGCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594704.5
CDS-3UTR CAA 90 bp GAGCAGAGCCGACTGGCTGTGGTGGAAGGCCAGGGAACGAATGCCGTCGTAGTGAGGAAATCAAACTCATaGATAGCATCCTCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: EQSRLAVVEGQGTNAVVVRKSNS*IASSES
Trigger: CGACTCTGAGGATGCTATCAATGAGTTTGATTTCCT...CACTACGACGGCATTCGTTCCCTGGCCTTCCACCACAGCCAGTCGGCTCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAAGAATGCCTTGGAGTTaGACCCGACGGCTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKRMPWS*TRRLSS
Trigger: GCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTCT...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp GTGCGAGCGCAGGGTGAACTTGGGGTTCCACGTCTTCTTAAAAGCATCTTTGCTGTCAGCCAGAATGCCTaGGAGTTTGACCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: VRAQGELGVPRLLKSIFAVSQNA*EFDPTA
Trigger: AGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGAC...AGCAAAGATGCTTTTAAGAAGACGTGGAACCCCAAGTTCACCCTGCGCTCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000600358.7
CDS-3UTR CAA 90 bp GAATCTTCCAACTATGGATGCAGGCATCTGCCCCGCCACTGTAGCAGTATTCACGTCAGCCAGAATGCCTaGGAGTTTGACCCGACGGCT +
Preference number: 5 (lower is better)
Translates to: ESSNYGCRHLPRHCSSIHVSQNA*EFDPTA
Trigger: AGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGAC...GTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600358.7
CDS-3UTR CAA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCGTGGCTCAGCACGCTaGGGTCGTAGCCATCATAGG +
Preference number: 5 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGRGSAR*GRSHHR
Trigger: CCTATGATGGCTACGACCCAAGCGTGCTGAGCCACG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGCATCATACGAAGACCTaGGCCAGGGCATCAGCGCCA +
Preference number: 5 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEHHTKT*ARASAP
Trigger: TGGCGCTGATGCCCTGGCCAAGGTCTTCGTATGATG...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS GCA 90 bp ATCCATGCTGAGGTCTGGAATCTTCCAACTATGGATGCAGGCATCTaGCCCGCCACTGTAGCAGTATTCACTGTTGCTGCCCATAGCCAC +
Preference number: 5 (lower is better)
Translates to: IHAEVWNLPTMDAGI*PATVAVFTVAAHSH
Trigger: GTGGCTATGGGCAGCAACAGTGAATACTGCTACAGTGGCGGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACCTCAGCATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000601631.6
CDS CCA 90 bp GACAGAGCCAGACTTCGTCCCTTCCACACCCAAACACCACTCTCCTaGACAATTACTTTTACTCTGAGAGAAAGGGCGACCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: DRARLRPFHTQTPLS*TITFTLRERATSSG
Trigger: GCCACTGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTGGGTGTGGAAGGGACGAAGTCTGGCTCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435164.6
CDS GCA 90 bp GAGAGGAAGGGGAATGGGGGACACAACTGGACCATCCCACAAGTGTaGAGGATCATCAGCCATGAGCAGGGCAATGAATTAAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: ERKGNGGHNWTIPQV*RIISHEQGNELKMH
Trigger: GTGCATCTTTAATTCATTGCCCTGCTCATGGCTGATGATCCTGCACACTTGTGGGATGGTCCAGTTGTGTCCCCCATTCCCCTTCCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS CCA 90 bp CCAGAGAAAGAGCCTTACCCCTTCCACACCCAAACACCACTCTCCTaGACAATTACTTTTACTCTGAGAGAAAGGGCGACCAGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PEKEPYPFHTQTPLS*TITFTLRERATSSG
Trigger: GCCACTGCTGGTCGCCCTTTCTCTCAGAGTAAAAGTAATTGTCCAGGAGAGTGGTGTTTGGGTGTGGAAGGGGTAAGGCTCTTTCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391910.7
CDS-3UTR CAA 90 bp TATAAACAGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGGATTCCACGGGGCCATaGGAGACTTGTTCTGACACA +
Preference number: 5 (lower is better)
Translates to: YKQEPGRGPRVQGRTKQEDSTGP*ETCSDT
Trigger: TGTGTCAGAACAAGTCTCCAATGGCCCCGTGGAATC...CTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCTGTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp GGGCGGCGCCATGAAAATCCCGTTATTTATACAGATATACAGGGAGTTCAGGGGCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GRRHENPVIYTDIQGVQGRSLPS*PAAFLF
Trigger: AAAGAGGAACGCGGCAGGCAAAGATGGCAAAGAGCG...CCCCTGAACTCCCTGTATATCTGTATAAATAACGGGATTTTCATGGCGCCGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS TCA 90 bp TATGATATTTGGCCCTTTCCTGCTTCAGCGCATACTCTAGCATCTTaGTCCGCCGCACCAGGTCCGTCTTTAGATTCTCCTGCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: YDIWPFPASAHTLAS*SAAPGPSLDSPALS
Trigger: GGAAAGGGCAGGAGAATCTAAAGACGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAAATATCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000593979.6
ENST00000594704.5
ENST00000596012.2
ENST00000597021.6
ENST00000597063.6
ENST00000600710.1
CDS-3UTR CAA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAGCACCTTCTGGAGTCTaGGAAAAACTGATCCCTAAA +
Preference number: 5 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKAPSGV*EKLIPK
Trigger: TTTAGGGATCAGTTTTTCCAAGACTCCAGAAGGTGC...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS-3UTR CAA 90 bp AGGAACCTGGAAGGGGACCGAGGGTGCAGGGTAGAACCAAACAAGAGAGTGAAAAGGAAATCAAACTCATaGATAGCATCCTCAGAGTCG +
Preference number: 5 (lower is better)
Translates to: RNLEGDRGCRVEPNKRVKRKSNS*IASSES
Trigger: CGACTCTGAGGATGCTATCAATGAGTTTGATTTCCT...TTTCACTCTCTTGTTTGGTTCTACCCTGCACCCTCGGTCCCCTTCCAGGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263280.11
ENST00000391910.7
CDS CCA 72 bp GTGGGACTGAAGGCCAGGCCCCACACGGCGTCCCCGTaGCCCTCCAGGACGTGGCTCAGCACGCTTGGGTCG +
Preference number: 6 (lower is better)
Translates to: VGLKARPHTASP*PSRTWLSTLGS
Trigger: CGACCCAAGCGTGCTGAGCCACGTCCTGGAGGGCCACGGGGACGCCGTGTGGGGCCTGGCCTTCAGTCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000598074.1
ENST00000601631.6
CDS CAA 90 bp CGGCTTTCTGCCTCTCCCCGACTGGGTCCTCATCCTGTTCCCTCCTaGAGGCCAGCCAGAGCTGGACGCCCGCCCTGGAGGGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: RLSASPRLGPHPVPS*RPARAGRPPWRAGG
Trigger: GCCGCCAGCCCTCCAGGGCGGGCGTCCAGCTCTGGCTGGCCTCAAGGAGGGAACAGGATGAGGACCCAGTCGGGGAGAGGCAGAAAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594357.6
CDS TCA 72 bp GGAAGGAGGCCACGATGTGGGCAGGCTCGGTGCTGGTaGAGGCCACTGAGGTGGGGACCCCGTGCTCGCTGG +
Preference number: 6 (lower is better)
Translates to: GRRPRCGQARCW*RPLRWGPRARW
Trigger: CCAGCGAGCACGGGGTCCCCACCTCAGTGGCCTTCACCAGCACCGAGCCTGCCCACATCGTGGCCTCCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
ENST00000601631.6
CDS GCA 72 bp CTGTGGGGAAGGTGCAGAGGCAGGCCGGGCTGCTGCTaGTGGGGTCCCAGATGCGGACGGTGCCATCAGCAG +
Preference number: 6 (lower is better)
Translates to: LWGRCRGRPGCC*WGPRCGRCHQQ
Trigger: CTGCTGATGGCACCGTCCGCATCTGGGACCCCAGCAGCAGCAGCCCGGCCTGCCTCTGCACCTTCCCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000598074.1
ENST00000600615.5
ENST00000601631.6
CDS GCA 72 bp CTGGGGTGGCAGGCAACAGCGTGGATGGCCTCCTCGTaGTTCTTGCGGTGGGCCGTGATCTCCTGCACGCAC +
Preference number: 6 (lower is better)
Translates to: LGWQATAWMASS*FLRWAVISCTH
Trigger: GTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS GCA 72 bp GACTCCCAGAGCCTCCCACAGGGACGCAAGCATCTCTaGTGCCTGCCTCTGGCCCTCCCCACCCACTACGAG +
Preference number: 6 (lower is better)
Translates to: DSQSLPQGRKHL*CLPLALPTHYE
Trigger: CTCGTAGTGGGTGGGGAGGGCCAGAGGCAGGCAGCAGAGATGCTTGCGTCCCTGTGGGAGGCTCTGGGAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS CCA 72 bp GCAATGAGGGCCTTGCTGGGGTGGCAGGCAACAGCGTaGATGGCCTCCTCGTGCTTCTTGCGGTGGGCCGTG +
Preference number: 6 (lower is better)
Translates to: AMRALLGWQATA*MASSCFLRWAV
Trigger: CACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAAGGCCCTCATTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS CCA 72 bp GGGGTGGTCACTGGGCTCCTCGCTCAGACGCAGCCCTaGAACCCCTCACCTGGCCTTGTCCAAAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: GVVTGLLAQTQP*NPSPGLVQRPQ
Trigger: CTGAGGCCTTTGGACAAGGCCAGGTGAGGGGTTCCAGGGCTGCGTCTGAGCGAGGAGCCCAGTGACCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS TCA 72 bp GGGGACCAGCCGTCCCACTGCATTCCGCCCAGGGTGTaGGAGAAATGTGCCACAGACACGACCCCGGGTTCC +
Preference number: 6 (lower is better)
Translates to: GDQPSHCIPPRV*EKCATDTTPGS
Trigger: GGAACCCGGGGTCGTGTCTGTGGCACATTTCTCTCACACCCTGGGCGGAATGCAGTGGGACGGCTGGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS TCA 72 bp GTCCAGGTGTGCAACCATGGAGTGCACCGGCTTACCTaGGGCGAGAAGGGCGGGTGGCAGGTTCCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: VQVCNHGVHRLT*GEKGGWQVPLP
Trigger: TGGGAGGGGAACCTGCCACCCGCCCTTCTCGCCTCAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 72 bp GCGGCAGGGGCAGTGAACAAAACAGGCAACTCTCCCTaGCCCGCAGCACTGACGCTGCAGCTGGGCAACAGG +
Preference number: 6 (lower is better)
Translates to: AAGAVNKTGNSP*PAALTLQLGNR
Trigger: CCTGTTGCCCAGCTGCAGCGTCAGTGCTGCGGGGCAGGGAGAGTTGCCTGTTTTGTTCACTGCCCCTGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS GCA 72 bp AGAGCCTCCCACAGGGACGCAAGCATCTCTGCTGCCTaGCTCTGGCCCTCCCCACCCACTACGAGCACAAGG +
Preference number: 6 (lower is better)
Translates to: RASHRDASISAA*LWPSPPTTSTR
Trigger: CCTTGTGCTCGTAGTGGGTGGGGAGGGCCAGAGGCAGGCAGCAGAGATGCTTGCGTCCCTGTGGGAGGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 72 bp AGGCAGGTGACTGCGTCCAGGTGTGCAACCATGGAGTaGACCGGCTTACCTGAGGCGAGAAGGGCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: RQVTASRCATME*TGLPEARRAGG
Trigger: GCCACCCGCCCTTCTCGCCTCAGGTAAGCCGGTGCACTCCATGGTTGCACACCTGGACGCAGTCACCTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 72 bp CCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTTaGCTGCCGCGTTCCCAGCCTGACTGCGGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: PALSRPSALCHL*LPRSQPDCGRR
Trigger: CCTTCTCCCGCAGTCAGGCTGGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CCA 72 bp TCAGCGCCAGCACTGGCAATGAGGGCCTTGCTGGGGTaGCAGGCAACAGCGTGGATGGCCTCCTCGTGCTTC +
Preference number: 6 (lower is better)
Translates to: SAPALAMRALLG*QATAWMASSCF
Trigger: GAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAAGGCCCTCATTGCCAGTGCTGGCGCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS TCA 72 bp TCAGGAATGCGCCGTTGGGGTCCACGGCTAGGCAGGTaGCTGCGTCCAGGTGTGCAACCATGGAGTGCACCG +
Preference number: 6 (lower is better)
Translates to: SGMRRWGPRLGR*LRPGVQPWSAP
Trigger: CGGTGCACTCCATGGTTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS TCA 72 bp CGGGTGGCAGGTTCCCCTCCCACTCTGGGCCTCGCCTaGGAGAGTGAAAGGACTGGACGAGAGACTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RVAGSPPTLGLA*ESERTGRETPR
Trigger: TCTGGGAGTCTCTCGTCCAGTCCTTTCACTCTCTCAGGCGAGGCCCAGAGTGGGAGGGGAACCTGCCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 72 bp GCAGCCTGGGCAACGGAGCAGAAATGTCGGAGAAGCTaGCGCCCCTCCTTCCACACCAACGGGCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: AAWATEQKCRRS*RPSFHTNGLFS
Trigger: GGAGAACAGCCCGTTGGTGTGGAAGGAGGGGCGGCAGCTTCTCCGACATTTCTGCTCCGTTGCCCAGGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600710.1
CDS CCA 72 bp AGTCATGGCCTGCACATGTGTCGGGGACAGAAGGGGTaGTCACTGGGCTCCTCGCTCAGACGCAGCCCTGGA +
Preference number: 6 (lower is better)
Translates to: SHGLHMCRGQKG*SLGSSLRRSPG
Trigger: TCCAGGGCTGCGTCTGAGCGAGGAGCCCAGTGACCACCCCTTCTGTCCCCGACACATGTGCAGGCCATGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS CAA 90 bp GGCAGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTaGACCCGACGGCTTTCTGCAGGGTCGAGGCATAGGGCCGGAGTC +
Preference number: 6 (lower is better)
Translates to: GSPSTSRRSARMPWS*TRRLSAGSRHRAGV
Trigger: GACTCCGGCCCTATGCCTCGACCCTGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000435164.6
ENST00000601631.6
CDS CAA 90 bp AGACGCAGGGAGCAGTCATGGCTTCCTGACATCAGGAATGCGCCGTaGGGGTCCACGGCTAGGCAGGTGACTGCGTCCAGGTGTGCAACC +
Preference number: 6 (lower is better)
Translates to: RRREQSWLPDIRNAP*GSTARQVTASRCAT
Trigger: GGTTGCACACCTGGACGCAGTCACCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGATGTCAGGAAGCCATGACTGCTCCCTGCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS CAA 90 bp TTGCTGGGGTGGCAGGCAACAGCGTGGATGGCCTCCTCGTGCTTCTaGCGGTGGGCCGTGATCTCCTGCACGCACGTTTTGTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LLGWQATAWMASSCF*RWAVISCTHVLLSR
Trigger: CCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCACCCCAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS CAA 90 bp CTTCGCATCCATCCCAGCAGTCATGCAGACACCGACACCCAGGGCTaGAGGGCCCCTGTCTTCCACCCACATGACCCTGGCAGGAATGCC +
Preference number: 6 (lower is better)
Translates to: LRIHPSSHADTDTQG*RAPVFHPHDPGRNA
Trigger: GGCATTCCTGCCAGGGTCATGTGGGTGGAAGACAGGGGCCCTCAAGCCCTGGGTGTCGGTGTCTGCATGACTGCTGGGATGGATGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS CAA 90 bp GGGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTGCCAAAGACAGCAGAGCAGAGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: GICPSTEPPKRSLPS*PAAFLPKTAEQRRH
Trigger: ATGCCTCCTCTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS CAA 90 bp TGCAGGAAGGGGATCTGCCCCAGCACTGAGCCGCCCAAGCGCTCTTaGCCATCTTTGCCTGCCGCGTTCCTGCCAAAGACAGCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: CRKGICPSTEPPKRS*PSLPAAFLPKTAEQ
Trigger: CTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGGGCAGATCCCCTTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS TCA 72 bp TCTGGGTTGGACCGCTGCTGCCCCGGGACTCCAGCGTaGGGAGGGCACTGCCAACCTCCATGTCATACAAGA +
Preference number: 6 (lower is better)
Translates to: SGLDRCCPGTPA*GGHCQPPCHTR
Trigger: TCTTGTATGACATGGAGGTTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGGGCAGCAGCGGTCCAACCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS TCA 72 bp CGTGGATGGCCTCCTCGTGCTTCTTGCGGTGGGCCGTaGTCTCCTGCACGCACGTTTTGTTGTCCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: RGWPPRASCGGP*SPARTFCCPGS
Trigger: GGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS TCA 72 bp CCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTaGCCCGACGGCTTTCTGCCTCTCCCCGACTGGGTC +
Preference number: 6 (lower is better)
Translates to: PHPAGQPECLGV*PDGFLPLPDWV
Trigger: GACCCAGTCGGGGAGAGGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594357.6
ENST00000602223.5
CDS TCA 72 bp AGGTTCCCCTCCCACTCTGGGCCTCGCCTGAGAGAGTaGAAGGACTGGACGAGAGACTCCCAGAGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: RFPSHSGPRLRE*KDWTRDSQSLP
Trigger: TGGGAGGCTCTGGGAGTCTCTCGTCCAGTCCTTTCACTCTCTCAGGCGAGGCCCAGAGTGGGAGGGGAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594581.5
ENST00000595357.5
CDS GCA 72 bp GCTGCCTCAGTGTCTTCGCATCCATCCCAGCAGTCATaGAGACACCGACACCCAGGGCTTGAGGGCCCCTGT +
Preference number: 6 (lower is better)
Translates to: AASVSSHPSQQS*RHRHPGLEGPC
Trigger: ACAGGGGCCCTCAAGCCCTGGGTGTCGGTGTCTGCATGACTGCTGGGATGGATGCGAAGACACTGAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS GCA 72 bp GGATGGTGTCTGTGTAGCCCACCTCTTCCAGGTACCTaGAGGGGTGCAGAGCCACGTGGGTCAGACATCCCC +
Preference number: 6 (lower is better)
Translates to: GWCLCSPPLPGT*RGAEPRGSDIP
Trigger: GGGGATGTCTGACCCACGTGGCTCTGCACCCCTGCAGGTACCTGGAAGAGGTGGGCTACACAGACACCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594847.6
CDS CCA 72 bp GTGTCCATGATGAAGACGTCTTCATGTGGCCGGGGCTaGGGTGTGCCAGGAGGCGGGCCAGTCACTTTTGGG +
Preference number: 6 (lower is better)
Translates to: VSMMKTSSCGRG*GVPGGGPVTFG
Trigger: CCCAAAAGTGACTGGCCCGCCTCCTGGCACACCCCAGCCCCGGCCACATGAAGACGTCTTCATCATGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263280.11
ENST00000539396.5
ENST00000594357.6
ENST00000599231.5
ENST00000601631.6
CDS CAA 72 bp GAGCAGTCATGGCTTCCTGACATCAGGAATGCGCCGTaGGGGTCCACGGCTAGGCAGGTGACTGCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: EQSWLPDIRNAP*GSTARQVTASR
Trigger: CCTGGACGCAGTCACCTGCCTAGCCGTGGACCCCAACGGCGCATTCCTGATGTCAGGAAGCCATGACTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS CAA 72 bp TGGCAGGCAACAGCGTGGATGGCCTCCTCGTGCTTCTaGCGGTGGGCCGTGATCTCCTGCACGCACGTTTTG +
Preference number: 6 (lower is better)
Translates to: WQATAWMASSCF*RWAVISCTHVL
Trigger: CAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGCCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS CAA 72 bp CCCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTaGCCTGCCGCGTTCCTGCCAAAGACAGCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: PSTEPPKRSLPS*PAAFLPKTAEQ
Trigger: CTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS TCA 72 bp GCCCCTCCTTCCACACCAACGGGCTGTTCTCCAGGGTaGCCGATTCCACGGGGCCATTGGAGACTTGTTCTG +
Preference number: 6 (lower is better)
Translates to: APPSTPTGCSPG*PIPRGHWRLVL
Trigger: CAGAACAAGTCTCCAATGGCCCCGTGGAATCGGTCACCCTGGAGAACAGCCCGTTGGTGTGGAAGGAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000593979.6
ENST00000594704.5
ENST00000596012.2
ENST00000597021.6
ENST00000597063.6
ENST00000600358.7
ENST00000600710.1
CDS TCA 72 bp CCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTTaGCCCGACGGCTTTCCAGCTCATGGGGGCTCCCAT +
Preference number: 6 (lower is better)
Translates to: PHPAGQPECLGV*PDGFPAHGGSH
Trigger: ATGGGAGCCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594847.6
ENST00000595357.5
ENST00000599231.5
ENST00000600358.7
CDS GCA 72 bp AGGGGAAGTGGGGCTCAACTCTCCTCTCTCACCCTCTaGTCATCACCTCCTGTGGCCCGCCCAAAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: RGSGAQLSSLTL*SSPPVARPKEN
Trigger: GTTCTCCTTTGGGCGGGCCACAGGAGGTGATGAGCAGAGGGTGAGAGAGGAGAGTTGAGCCCCACTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS GCA 72 bp CCAGCACTGAGCCGCCCAAGCGCTCTTTGCCATCTTTaGCTGCCGCGTTCCTGCCAAAGACAGCAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: PALSRPSALCHL*LPRSCQRQQSR
Trigger: TCTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGGGCGGCTCAGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS CCA 72 bp GCAACAGCGTGGATGGCCTCCTCGTGCTTCTTGCGGTaGGCCGTGATCTCCTGCACGCACGTTTTGTTGTCC +
Preference number: 6 (lower is better)
Translates to: ATAWMASSCFLR*AVISCTHVLLS
Trigger: GGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGAGGCCATCCACGCTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS CCA 72 bp GAGCATCTGTCTCTGGGAGGCGTGGGAAGCTACTTCTaGAGCTTAGGGACAAGAGTGGGTGGCTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: EHLSLGGVGSYF*SLGTRVGGSAR
Trigger: CCGAGCCGAGCCACCCACTCTTGTCCCTAAGCTCCAGAAGTAGCTTCCCACGCCTCCCAGAGACAGATGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597021.6
ENST00000597063.6
CDS CCA 72 bp AGCCCATCCACATCCCGCAGGTCAGCCAGAATGCCTTaGAGTTTGACCCGACGGCTTTCTGCCTCTCCCCGA +
Preference number: 6 (lower is better)
Translates to: SPSTSRRSARMP*SLTRRLSASPR
Trigger: TCGGGGAGAGGCAGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGATGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594357.6
ENST00000602223.5
CDS CAA 72 bp TCCACATCCCGCAGGTCAGCCAGAATGCCTTGGAGTTaGACCCGACGGCTTTCCAGCTCATGGGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: STSRRSARMPWS*TRRLSSSWGLP
Trigger: TGGGAGCCCCCATGAGCTGGAAAGCCGTCGGGTCAAACTCCAAGGCATTCTGGCTGACCTGCGGGATGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594847.6
ENST00000595357.5
ENST00000599231.5
ENST00000600358.7
CDS CAA 72 bp TTGCGGTGGGCCGTGATCTCCTGCACGCACGTTTTGTaGTCCAGGCTCCAGAGACGCAGGGAGCAGTCATGG +
Preference number: 6 (lower is better)
Translates to: LRWAVISCTHVL*SRLQRRREQSW
Trigger: CCATGACTGCTCCCTGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
ENST00000601869.1
CDS CAA 90 bp TCGTGCTTCTTGCGGTGGGCCGTGATCTCCTGCACGCACGTTTTGTaGTCCAGGCTCCAGAGACGCAGGGAGCAGTCATGGCTTCCTGAC +
Preference number: 6 (lower is better)
Translates to: SCFLRWAVISCTHVL*SRLQRRREQSWLPD
Trigger: GTCAGGAAGCCATGACTGCTCCCTGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
CDS CAA 90 bp TCCTCGTGCTTCTTGCGGTGGGCCGTGATCTCCTGCACGCACGTTTaGTTGTCCAGGCTCCAGAGACGCAGGGAGCAGTCATGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: SSCFLRWAVISCTHV*LSRLQRRREQSWLP
Trigger: AGGAAGCCATGACTGCTCCCTGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAAGCACGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
CDS GCA 72 bp GCCTTGGATGGGAGCTTCACACGCTGCTTCTTGTGCTaGACGCTGTCCAGCTCATCGTCCTCGTCGCTGTCT +
Preference number: 6 (lower is better)
Translates to: ALDGSFTRCFLC*TLSSSSSSSLS
Trigger: AGACAGCGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCCATCCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000594847.6
ENST00000595357.5
ENST00000596016.5
ENST00000599231.5
ENST00000600358.7
ENST00000602397.5
CDS GCA 72 bp GCAGAGTCTCCATGCTCGCCCAACAAGTCCCCACACTaGGCTGGGTTCTGGAGAGACAAAGGTGAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: AESPCSPNKSPH*AGFWRDKGEPD
Trigger: GTCAGGCTCACCTTTGTCTCTCCAGAACCCAGCGCAGTGTGGGGACTTGTTGGGCGAGCATGGAGACTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS CCA 72 bp GCTCCAATAGAAAAGCTTTACAAGCCAAGCCCGCTGTaGGGACCAGCCGTCCCACTGCATTCCGCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: APIEKLYKPSPL*GPAVPLHSAQG
Trigger: ACCCTGGGCGGAATGCAGTGGGACGGCTGGTCCCCACAGCGGGCTTGGCTTGTAAAGCTTTTCTATTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS CCA 72 bp ACCTCTTCCAGGTACCTGCAGGGGTGCAGAGCCACGTaGGTCAGACATCCCCTGGGCTTCTTCATGTACCAC +
Preference number: 6 (lower is better)
Translates to: TSSRYLQGCRAT*VRHPLGFFMYH
Trigger: GTGGTACATGAAGAAGCCCAGGGGATGTCTGACCCACGTGGCTCTGCACCCCTGCAGGTACCTGGAAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594847.6
CDS CAA 72 bp ACCAGAGCCTTGGATGGGAGCTTCACACGCTGCTTCTaGTGCTGCACGCTGTCCAGCTCATCGTCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: TRALDGSFTRCF*CCTLSSSSSSS
Trigger: CGACGAGGACGATGAGCTGGACAGCGTGCAGCACAAGAAGCAGCGTGTGAAGCTCCCATCCAAGGCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000594847.6
ENST00000595357.5
ENST00000596016.5
ENST00000599231.5
ENST00000600358.7
ENST00000602397.5
CDS CAA 72 bp GGTGATGGTGAGAGGCTGGTTTGGATGACTCACCACTaGGTTGATCTGGGTTGGACCGCTGCTGCCCCGGGA +
Preference number: 6 (lower is better)
Translates to: GDGERLVWMTHH*VDLGWTAAAPG
Trigger: TCCCGGGGCAGCAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACCATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS CAA 72 bp TTCTTGCGGTGGGCCGTGATCTCCTGCACGCACGTTTaGTTGTCCAGGCTCCAGAGACGCAGGGAGCAGTCA +
Preference number: 6 (lower is better)
Translates to: FLRWAVISCTHV*LSRLQRRREQS
Trigger: TGACTGCTCCCTGCGTCTCTGGAGCCTGGACAACAAAACGTGCGTGCAGGAGATCACGGCCCACCGCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000600615.5
ENST00000601869.1
CDS CAA 72 bp CAGAGCTCCACTCCATCCTCAGAACACTCGCTGCACTaGCAGCGGGACACAGGACTCCATTCTCACCGGCCT +
Preference number: 6 (lower is better)
Translates to: QSSTPSSEHSLH*QRDTGLHSHRP
Trigger: AGGCCGGTGAGAATGGAGTCCTGTGTCCCGCTGCAAGTGCAGCGAGTGTTCTGAGGATGGAGTGGAGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CAA 90 bp TCCACCCACCCACGTCACACTCCATCCCTTCTAAGCACAGCCACGTaGCTGGCCTCAATGCCCTTATCCAGAGACAACAGGGTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: STHPRHTPSLLSTAT*LASMPLSRDNRVGA
Trigger: TGCTCCCACCCTGTTGTCTCTGGATAAGGGCATTGAGGCCAGCAACGTGGCTGTGCTTAGAAGGGATGGAGTGTGACGTGGGTGGGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS TCA 72 bp TCGTCGTGGGCGGTGATGGTGAGAGGCTGGTTTGGATaGCTCACCACTTGGTTGATCTGGGTTGGACCGCTG +
Preference number: 6 (lower is better)
Translates to: SSWAVMVRGWFG*LTTWLIWVGPL
Trigger: CAGCGGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACCATCACCGCCCACGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS TCA 72 bp ACTCCATTCTCACCGGCCTTCCTCCCACAACGACACTaGCACGCCGCACAGGCTCAGCCTCTTTCTCAGCTT +
Preference number: 6 (lower is better)
Translates to: TPFSPAFLPQRH*HAAQAQPLSQL
Trigger: AAGCTGAGAAAGAGGCTGAGCCTGTGCGGCGTGTCAGTGTCGTTGTGGGAGGAAGGCCGGTGAGAATGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS GCA 72 bp CCAAGCGCTCTTTGCCATCTTTGCCTGCCGCGTTCCTaGCAAAGACAGCAGAGCAGAGGAGGCATGAGTCCT +
Preference number: 6 (lower is better)
Translates to: PSALCHLCLPRS*QRQQSRGGMSP
Trigger: AGGACTCATGCCTCCTCTGCTCTGCTGTCTTTGGCAGGAACGCGGCAGGCAAAGATGGCAAAGAGCGCTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599231.5
CDS GCA 72 bp AGAGCTCCACTCCATCCTCAGAACACTCGCTGCACTTaGAGCGGGACACAGGACTCCATTCTCACCGGCCTT +
Preference number: 6 (lower is better)
Translates to: RAPLHPQNTRCT*SGTQDSILTGL
Trigger: AAGGCCGGTGAGAATGGAGTCCTGTGTCCCGCTGCAAGTGCAGCGAGTGTTCTGAGGATGGAGTGGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS GCA 72 bp TGTCAACTGCCAGTTACCAACGGGTGCAGAGGTCACTaGAGATGTACCCTCTCGCCTCACGGCTGCCATCAC +
Preference number: 6 (lower is better)
Translates to: CQLPVTNGCRGH*RCTLSPHGCHH
Trigger: GTGATGGCAGCCGTGAGGCGAGAGGGTACATCTGCAGTGACCTCTGCACCCGTTGGTAACTGGCAGTTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS GCA 72 bp CCCTGGAGGTCTTGTCAACTGCCAGTTACCAACGGGTaGAGAGGTCACTGCAGATGTACCCTCTCGCCTCAC +
Preference number: 6 (lower is better)
Translates to: PWRSCQLPVTNG*RGHCRCTLSPH
Trigger: GTGAGGCGAGAGGGTACATCTGCAGTGACCTCTGCACCCGTTGGTAACTGGCAGTTGACAAGACCTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CCA 72 bp CCTGTCGTCGTGGGCGGTGATGGTGAGAGGCTGGTTTaGATGACTCACCACTTGGTTGATCTGGGTTGGACC +
Preference number: 6 (lower is better)
Translates to: PVVVGGDGERLV*MTHHLVDLGWT
Trigger: GGTCCAACCCAGATCAACCAAGTGGTGAGTCATCCAAACCAGCCTCTCACCATCACCGCCCACGACGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594581.5
ENST00000595357.5
ENST00000600615.5
CDS CCA 72 bp GGAGCAGCCTTCCCCTCGCTTCCACCTTTGTGGTTATaGAGCCCCAAACCTCTTAGGACTCTGCACCAGGAG +
Preference number: 6 (lower is better)
Translates to: GAAFPSLPPLWL*SPKPLRTLHQE
Trigger: CTCCTGGTGCAGAGTCCTAAGAGGTTTGGGGCTCCATAACCACAAAGGTGGAAGCGAGGGGAAGGCTGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539396.5
CDS GCA 72 bp ATCACCAGAGCTCCACTCCATCCTCAGAACACTCGCTaGACTTGCAGCGGGACACAGGACTCCATTCTCACC +
Preference number: 6 (lower is better)
Translates to: ITRAPLHPQNTR*TCSGTQDSILT
Trigger: GGTGAGAATGGAGTCCTGTGTCCCGCTGCAAGTGCAGCGAGTGTTCTGAGGATGGAGTGGAGCTCTGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CAA 72 bp CCCCCTTTCTGCCATCAGGTTGATGCCCTGGAGGTCTaGTCAACTGCCAGTTACCAACGGGTGCAGAGGTCA +
Preference number: 6 (lower is better)
Translates to: PPFCHQVDALEV*STASYQRVQRS
Trigger: TGACCTCTGCACCCGTTGGTAACTGGCAGTTGACAAGACCTCCAGGGCATCAACCTGATGGCAGAAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000596016.5
CDS CCA 72 bp GGGAAGCTACTTCTGGAGCTTAGGGACAAGAGTGGGTaGCTCGGCTCGGCTCCTGCTCCAATAGAAAAGCTT +
Preference number: 6 (lower is better)
Translates to: GKLLLELRDKSG*LGSAPAPIEKL
Trigger: AAGCTTTTCTATTGGAGCAGGAGCCGAGCCGAGCCACCCACTCTTGTCCCTAAGCTCCAGAAGTAGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597021.6
CDS CAA 72 bp CCACGTCACACTCCATCCCTTCTAAGCACAGCCACGTaGCTGGCCTCAATGCCCTTATCCAGAGACAACAGG +
Preference number: 6 (lower is better)
Translates to: PRHTPSLLSTAT*LASMPLSRDNR
Trigger: CCTGTTGTCTCTGGATAAGGGCATTGAGGCCAGCAACGTGGCTGTGCTTAGAAGGGATGGAGTGTGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601869.1
CDS TCA 72 bp TGGCCCTTTCCTGCTTCAGCGCATACTCTAGCATCTTaGTCCGCCGCACCAGGTCCGTCTTTAGATTCTCCT +
Preference number: 6 (lower is better)
Translates to: WPFPASAHTLAS*SAAPGPSLDSP
Trigger: AGGAGAATCTAAAGACGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGCGCTGAAGCAGGAAAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000593979.6
ENST00000594704.5
ENST00000596012.2
ENST00000597021.6
ENST00000597063.6
ENST00000600710.1
CDS CCA 72 bp TGGGTCGTAGCCATCATAGGGATCCATGCTGAGGTCTaGAATCTTCCAACTATGGATGCAGGCATCTGCCCC +
Preference number: 6 (lower is better)
Translates to: WVVAIIGIHAEV*NLPTMDAGICP
Trigger: GGGGCAGATGCCTGCATCCATAGTTGGAAGATTCCAGACCTCAGCATGGATCCCTATGATGGCTACGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000598074.1
ENST00000601631.6
CDS CCA 72 bp CTTGCAGTTGAGAGGAAGGGGAATGGGGGACACAACTaGACCATCCCACAAGTGTGCAGGATCATCAGCCAT +
Preference number: 6 (lower is better)
Translates to: LAVERKGNGGHN*TIPQVCRIISH
Trigger: ATGGCTGATGATCCTGCACACTTGTGGGATGGTCCAGTTGTGTCCCCCATTCCCCTTCCTCTCAACTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594581.5
CDS CAA 72 bp TTGGCCCTTTCCTGCTTCAGCGCATACTCTAGCATCTaGATCCGCCGCACCAGGTCCGTCTTTAGATTCTCC +
Preference number: 6 (lower is better)
Translates to: LALSCFSAYSSI*IRRTRSVFRFS
Trigger: GGAGAATCTAAAGACGGACCTGGTGCGGCGGATCAAGATGCTAGAGTATGCGCTGAAGCAGGAAAGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000593979.6
ENST00000594704.5
ENST00000596012.2
ENST00000597021.6
ENST00000597063.6
ENST00000600710.1
CDS CAA 72 bp CTTCTTAAAAGCATATCGCAGCTGAGGTCGTTGTCGTaGGTGACGGTGAGATCTGCCAAGTCCCCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: LLKSISQLRSLS*VTVRSAKSPRL
Trigger: GAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATATGCTTTTAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594287.6
CDS CAA 72 bp CCACGTCTTCTTAAAAGCATATCGCAGCTGAGGTCGTaGTCGTTGGTGACGGTGAGATCTGCCAAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: PRLLKSISQLRS*SLVTVRSAKSP
Trigger: GGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGCGATATGCTTTTAAGAAGACGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594287.6
CDS TCA 72 bp GCACGCTTGGGTCGTAGCCATCATAGGGATCCATGCTaGGGTCTGGAATCTTCCAACTATGGATGCAGGCAT +
Preference number: 6 (lower is better)
Translates to: ARLGRSHHRDPC*GLESSNYGCRH
Trigger: ATGCCTGCATCCATAGTTGGAAGATTCCAGACCTCAGCATGGATCCCTATGATGGCTACGACCCAAGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000539396.5
ENST00000594287.6
ENST00000594357.6
ENST00000594581.5
ENST00000595357.5
ENST00000598074.1
ENST00000601631.6
CDS CCA 72 bp CTCGCTCCAGCAGTTCCCCGTCAAGGCTATTTCCAGTaGAAGCCCTTGTACACACACACAATGCTATGTGTG +
Preference number: 6 (lower is better)
Translates to: LAPAVPRQGYFQ*KPLYTHTMLCV
Trigger: CACACATAGCATTGTGTGTGTGTACAAGGGCTTCCACTGGAAATAGCCTTGACGGGGAACTGCTGGAGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594847.6
CDS CAA 90 bp GGAGCCCCTTCCCCATCCTCTCCTGAGCCCAGGAAATCAAACTCATaGATAGCATCCTCAGAGTCGTCTTCCTCATCCTCGTCTTCCATT +
Preference number: 6 (lower is better)
Translates to: GAPSPSSPEPRKSNS*IASSESSSSSSSSI
Trigger: AATGGAAGACGAGGATGAGGAAGACGACTCTGAGGATGCTATCAATGAGTTTGATTTCCTGGGCTCAGGAGAGGATGGGGAAGGGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000263280.11
ENST00000391910.7
ENST00000435164.6
ENST00000539396.5
ENST00000594847.6
ENST00000595357.5
ENST00000599231.5
ENST00000600358.7
CDS CCA 72 bp TGTTACAGAGCTTCAATGGCCAAGTTACAAAGCGTCTaGGCATCAGGGCCCACATCTGTAAACTGGGGATCA +
Preference number: 6 (lower is better)
Translates to: CYRASMAKLQSV*ASGPTSVNWGS
Trigger: TGATCCCCAGTTTACAGATGTGGGCCCTGATGCCCAGACGCTTTGTAACTTGGCCATTGAAGCTCTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601869.1