Pregenerated sensors for STRIT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000240045

Ensembl transcript IDs: ENST00000489090.2

Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGAGGCATGAGCCACCTTaGACAGCCTCAGCCCACTTT	+
Preference number: 2 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRRHEPP*TASAHF Trigger: AAAGTGGGCTGAGGCTGTGCAAGGTGGCTCATGCCT...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
3UTR-3UTR GCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGTTATGCATACCAAAGTaGCAGTTTATGATCCAAGTT	+
Preference number: 2 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRLCIPK*QFMIQV Trigger: AACTTGGATCATAAACTGGCACTTTGGTATGCATAA...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR CCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGATTCCTGTTGGTGGGTaGCTAGGTCAGGCCACGCTT	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRIPVGG*LGQATL Trigger: AAGCGTGGCCTGACCTAGCCACCCACCAACAGGAAT...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR CCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGCATTATTCCTGTTGGTaGGTGGCTAGGTCAGGCCAC	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRHYSCW*VARSGH Trigger: GTGGCCTGACCTAGCCACCCACCAACAGGAATAATG...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR CCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGAGCCATTATTCCTGTTaGTGGGTGGCTAGGTCAGGC	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRSHYSC*WVARSG Trigger: GCCTGACCTAGCCACCCACCAACAGGAATAATGGCT...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR TCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGAGGAACCAGAAGGTGTaGAAATGTAGACCCCGCTTT	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRRNQKV*KCRPRF Trigger: AAAGCGGGGTCTACATTTTCACACCTTCTGGTTCCT...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR CCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGAAGGTCTCCAATTTCTaGGCTCAAAGGATCCTCACA	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRKVSNF*AQRILT Trigger: TGTGAGGATCCTTTGAGCCCAGAAATTGGAGACCTT...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR TCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGCAACATAAATCATTATaGTGCAGCCCACAATCCAGC	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRQHKSL*CSPQSS Trigger: GCTGGATTGTGGGCTGCATCATAATGATTTATGTTG...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS-3UTR TCA 90 bp	AGATGGGGTCTCTCTCTGTCGCCTAGGAAGGTCTCCAATTTCTGGGCTCAAAGGTTCCCATCTGATAAGTaGGCAACAATTCCTCAGTGT	+
Preference number: 4 (lower is better) Translates to: RWGLSLSPRKVSNFWAQRFPSDK*ATIPQC Trigger: ACACTGAGGAATTGTTGCTCACTTATCAGATGGGAA...CCTTTGAGCCCAGAAATTGGAGACCTTCCTAGGCGACAGAGAGAGACCCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS CCA 72 bp	TGTAGACCCCGCTTTTTCAGCCATTATTCCTGTTGGTaGGTGGCTAGGTCAGGCCACGCTTACCTCTTTCTT	+
Preference number: 6 (lower is better) Translates to: CRPRFFSHYSCW*VARSGHAYLFL Trigger: AAGAAAGAGGTAAGCGTGGCCTGACCTAGCCACCCACCAACAGGAATAATGGCTGAAAAAGCGGGGTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489090.2
CDS TCA 72 bp	CCAGCCAATCAGGAGAAGAATAGGAACCAGAAGGTGTaGAAATGTAGACCCCGCTTTTTCAGCCATTATTCC	+
Preference number: 6 (lower is better) Translates to: PANQEKNRNQKV*KCRPRFFSHYS Trigger: GGAATAATGGCTGAAAAAGCGGGGTCTACATTTTCACACCTTCTGGTTCCTATTCTTCTCCTGATTGGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489090.2