RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STRIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000143093

Ensembl transcript IDs: ENST00000369795.8, ENST00000369796.5, ENST00000461054.1, ENST00000473429.5, ENST00000485775.5, ENST00000489059.1, ENST00000535003.5, ENST00000539541.1, ENST00000540970.1

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTaGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAA +
Preference number: 1 (lower is better)
Translates to: QAGLTQAQDRLRKTQ*GCAATWWGMGALQQ
Trigger: TTGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR CCA 90 bp GACTGCGGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTT +
Preference number: 1 (lower is better)
Translates to: DCGRHSGAVLPPGGG*EHCSNELGQSHRYL
Trigger: AAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCCGCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR CCA 90 bp GAAGAATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTaGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGAC +
Preference number: 1 (lower is better)
Translates to: EEWISGRDDCFGAGP*EPRGGQAGLTQAQD
Trigger: GTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR GCA 90 bp AGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATC +
Preference number: 1 (lower is better)
Translates to: RHSGAVLPPGGGWEH*SNELGQSHRYLQII
Trigger: GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR TCA 90 bp CTTGTGCTCTCGGCGGCCCCGTTTCTGCTGCTGCTCAATCAAGTCTaGAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTTGCGAATCAC +
Preference number: 1 (lower is better)
Translates to: LVLSAAPFLLLLNQV*SRCWWRGCSHVANH
Trigger: GTGATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCGAGAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 90 bp TGCTTTATCAGAGCCTTGTGCTCTCGGCGGCCCCGTTTCTGCTGCTaGTCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTC +
Preference number: 1 (lower is better)
Translates to: CFIRALCSRRPRFCC*SIKSEADAGGEAAL
Trigger: GAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCGAGAGCACAAGGCTCTGATAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 90 bp TCCTGCTTTATCAGAGCCTTGTGCTCTCGGCGGCCCCGTTTCTGCTaGTGCTCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCT +
Preference number: 1 (lower is better)
Translates to: SCFIRALCSRRPRFC*CSIKSEADAGGEAA
Trigger: AGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCGAGAGCACAAGGCTCTGATAAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 90 bp GCAATCGACGTGTACTTGTGCTGTTTCAGAGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACTGCCT +
Preference number: 1 (lower is better)
Translates to: AIDVYLCCFRVLMLS*IGLGSPTTVFVSLP
Trigger: AGGCAGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGCACAAGTACACGTCGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 90 bp GAGAGGGGAGCGGAGGTATTCCTCCTCCATCTGTGCCTGGACCTCTaGAATCGACGTGTACTTGTGCTGTTTCAGAGTCTTGATGCTTTC +
Preference number: 1 (lower is better)
Translates to: ERGAEVFLLHLCLDL*NRRVLVLFQSLDAF
Trigger: GAAAGCATCAAGACTCTGAAACAGCACAAGTACACGTCGATTGCAGAGGTCCAGGCACAGATGGAGGAGGAATACCTCCGCTCCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 90 bp ATGCACGGCGGAGGGGTTCCCATCCCATTCCAGCTTTCCCAGCCTTaGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGAG +
Preference number: 1 (lower is better)
Translates to: MHGGGVPIPFQLSQP*ADCEMSQNQPYPRE
Trigger: CTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAATGGGATGGGAACCCCTCCGCCGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR TCA 90 bp ACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCTaGAATTCAGATGCACGGCGGAGGGGTTCCCATCCCATTCCAGCT +
Preference number: 1 (lower is better)
Translates to: TKQGFVCLERHQHDP*NSDARRRGSHPIPA
Trigger: AGCTGGAATGGGATGGGAACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR TCA 90 bp CAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATaGCCCCTGAAATTCAGATGCACGGCGGAGGGGTTCCCATCCCAT +
Preference number: 1 (lower is better)
Translates to: QADKARICMSREASA*PLKFRCTAEGFPSH
Trigger: ATGGGATGGGAACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR TCA 90 bp CTTCCTCTTCTCGAGAGTCATCAGCCTTGTAGGGATCCCGCTCGTTaGAGGCATCTAGGTTGTCCTGCTTTATCAGAGCCTTGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: LPLLESHQPCRDPAR*RHLGCPALSEPCAL
Trigger: GAGAGCACAAGGCTCTGATAAAGCAGGACAACCTAGATGCCTTCAACGAGCGGGATCCCTACAAGGCTGATGACTCTCGAGAAGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 90 bp ACCACTGCAAAATTTGGTCACCATCCCAAACAGCATGATGGCAAATaGCTCATTGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGT +
Preference number: 1 (lower is better)
Translates to: TTAKFGHHPKQHDGK*LIVVQRGAQLGSEG
Trigger: ACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGTGACCAAATTTTGCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 90 bp AGTCCCCTAACCAACAGCCTCACTGCAGCAGCTCTTCCCAGGAAATaGGCTTGGAGAAGACCTCCCTTTCTAACCAGAGGTCATAGTTCA +
Preference number: 1 (lower is better)
Translates to: SPLTNSLTAAALPRK*AWRRPPFLTRGHSS
Trigger: TGAACTATGACCTCTGGTTAGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTTAGGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR TCA 90 bp TTCCCATCCCATTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATaGGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTA +
Preference number: 1 (lower is better)
Translates to: FPSHSSFPSLGLIVK*AKTNHIQERRVGEV
Trigger: TACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAATGGGATGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR TCA 90 bp CTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTaGCAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACC +
Preference number: 1 (lower is better)
Translates to: LSGPGPNPKLSSFAS*QSKDLYVSRGISMT
Trigger: GGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCACAGTGGGGCTGTGCTaGCACCTGGTGGGGGATGGG +
Preference number: 2 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSTVGLC*HLVGDG
Trigger: CCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGT...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp CACTGGCAGGAAGTCAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTGAACTCCGCCGTCAGCTCTaGCAGCTCATGCACCACGCA +
Preference number: 2 (lower is better)
Translates to: HWQEVRVAVGPVIAPGVELRRQL*QLMHHA
Trigger: TGCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAG...TTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTGACTTCCTGCCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp CAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTCCTCCACTCAGCGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAG +
Preference number: 2 (lower is better)
Translates to: QRGAQLGSEGLPHGPPLSGGWEH*SNELGQ
Trigger: CTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC...GCTGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR TCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAGGGATCCCGCTCGTTaGAGGCATCTAGGTTGTCCT +
Preference number: 2 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSRDPAR*RHLGCP
Trigger: AGGACAACCTAGATGCCTTCAACGAGCGGGATCCCT...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATCGGCTCTGAAGGTCTaGCGCATGGTCCTCCACTCA +
Preference number: 2 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAASALKV*RMVLHS
Trigger: TGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGTCAGCCAGGGAGATaGCAGGCTTCCTCACAGCAC +
Preference number: 2 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDCQPGR*QASSQH
Trigger: GTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTGACA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR TCA 90 bp TCGTGGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACTGCCTAGAGTGTCCACTGGACAAAGGTaGCACAGGCAAGGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SWIGLGSPTTVFVSLPRVSTGQR*HRQGQA
Trigger: TGCCTGGCCTTGCCTGTGTCACCTTTGTCCAGTGGA...CACTCTAGGCAGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp TGGGTGCTGCAGCCAACAGGATCTTCAGGAGGGCAATCATATACTGAGGCAGGCACAGTGGGGCTGTGCTaGCACCTGGTGGGGGATGGG +
Preference number: 2 (lower is better)
Translates to: WVLQPTGSSGGQSYTEAGTVGLC*HLVGDG
Trigger: CCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGT...GCCTGCCTCAGTATATGATTGCCCTCCTGAAGATCCTGTTGGCTGCAGCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTCATTGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTTTCGGAGCAGGACCCTaGGAACCAAGGGGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: LIVVQRGAQLGSEGLPHGFGAGP*EPRGGQ
Trigger: TTGACCTCCCCTTGGTTCCCAGGGTCCTGCTCCGAA...ACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR TCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTCTTCTTCTCCCCCTaGGAGAGGGGAGCGGAGGTA +
Preference number: 2 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNFFFSP*ERGAEV
Trigger: TACCTCCGCTCCCCTCTCTCAGGGGGAGAAGAAGAA...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CAA 90 bp CCAGAGGTCATAGTTCATCTGAAAGTCCTCAGGGAGGTCCACCCGTaGGCCCAGGACACTCTGCAGGCAGTTGTCCACTGGCAGGAAGTC +
Preference number: 2 (lower is better)
Translates to: PEVIVHLKVLREVHP*AQDTLQAVVHWQEV
Trigger: GACTTCCTGCCAGTGGACAACTGCCTGCAGAGTGTCCTGGGCCAACGGGTGGACCTCCCTGAGGACTTTCAGATGAACTATGACCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTCAGCCTTCATGCTCTaGAGCTCCTCAAAGCCGCCT +
Preference number: 2 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNSAFML*SSSKPP
Trigger: AGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGA...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTCCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAA +
Preference number: 2 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVPPGGG*EHCSNE
Trigger: TTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGG...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR TCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGGGAGCACTGCAGCAATaGACTAGGACAGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGGALQQ*TRTVPQ
Trigger: CTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCC...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR TCA 90 bp CAGTCCCCTAACCAACAGCCTCACTGCAGCAGCTCTTCCCAGGAAATGGGCTTGCGAGAGGCATCAGCATaGCCCCTGAAATTCAGATGC +
Preference number: 2 (lower is better)
Translates to: QSPNQQPHCSSSSQEMGLREASA*PLKFRC
Trigger: GCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCG...CAAGCCCATTTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTTAGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTGGCCCAGGACACTCTaGAGGCAGTTGTCCACTGGC +
Preference number: 2 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSWPRTL*RQLSTG
Trigger: GCCAGTGGACAACTGCCTGCAGAGTGTCCTGGGCCA...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTCAGGCAGAGATGACTaGTTCGGAGCAGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: DTDFLALALILNSPPLQASGRDD*FGAGPW
Trigger: CCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp TCCATCTGTGCCTGGACCTCTGCAATCGACGTGTACTTGTGCTGTTTCAGAGTCTCAGGCAGAGATGACTaGTTCGGAGCAGGACCCTGG +
Preference number: 2 (lower is better)
Translates to: SICAWTSAIDVYLCCFRVSGRDD*FGAGPW
Trigger: CCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGA...GACTCTGAAACAGCACAAGTACACGTCGATTGCAGAGGTCCAGGCACAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTGGAGGCCCAGGATGCTaGGCTTCTCAGCCTTCATGC +
Preference number: 2 (lower is better)
Translates to: ALALILNSPPLQADKARIGGPGC*ASQPSC
Trigger: GCATGAAGGCTGAGAAGCGCAGCATCCTGGGCCTCC...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCATGTGCTGCCACCTGGTaGGGGATGGGAGCACTGCAG +
Preference number: 2 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPCAATW*GMGALQ
Trigger: CTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACA...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp TGTCACCTGCTTCCAAACTCTCCGCCGTCAGCTCTGGCAGCTCATGCACCACGCGAAAAATGGCCCCTCTaGTTAAGGGAAGCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: CHLLPNSPPSALAAHAPREKWPL*LREASL
Trigger: AAGAGAAGCTTCCCTTAACCAGAGGGGCCATTTTTC...GCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAGAGTTTGGAAGCAGGTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp GGCATCAAGATCATTGCCGTATGCCCAGTCGTCGTTCAGCCGATGCCGCACCTTACTGTTGCTGTCCACTaGACAAAGGTGACACAGGCA +
Preference number: 2 (lower is better)
Translates to: GIKIIAVCPVVVQPMPHLTVAVH*TKVTQA
Trigger: TGCCTGTGTCACCTTTGTCCAGTGGACAGCAACAGT...AAGGTGCGGCATCGGCTGAACGACGACTGGGCATACGGCAATGATCTTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTGCAGGCGGCACTGTTaGTGTCCACTGGACAAAGGT +
Preference number: 2 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSCRRHC*CPLDKG
Trigger: ACCTTTGTCCAGTGGACAGCAACAGTGCCGCCTGCA...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp CAGTCCCCTAACCAACAGCCTCACTGCAGCAGCTCTTCCCAGGAAATGGGCTTGTTGGTAGAGGGTTTCTaGAGGGACTTGCTCAACTTC +
Preference number: 2 (lower is better)
Translates to: QSPNQQPHCSSSSQEMGLLVEGF*RDLLNF
Trigger: GAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAA...CAAGCCCATTTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTTAGGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATGTGCTGCCACCTGGTaGGGGATGGGAGCACTGCAG +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRCAATW*GMGALQ
Trigger: CTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR TCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGGGCTGATTGTGAAATaGGCCAAAACCAACCATATC +
Preference number: 2 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVGLIVK*AKTNHI
Trigger: GATATGGTTGGTTTTGGCTCATTTCACAATCAGCCC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAG +
Preference number: 2 (lower is better)
Translates to: ALALILNSPPLQADKARIGGWEH*SNELGQ
Trigger: CTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATGCTTCCTCACAGCACTaGTGCAGGCGGCACTGTTGC +
Preference number: 2 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYASSQH*CRRHCC
Trigger: GCAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGC...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGATGCTTTCGTGGATTaGCCTGGGCAGCCCCACCAC +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRDAFVD*PGQPHH
Trigger: GTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATC...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CAGTCCCCTAACCAACAGCCTCACTGCAGCAGCTCTTCCCAGGAAATGGGCTTGCATAGAGCTGCATCATaGCTTGTTTCACCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: QSPNQQPHCSSSSQEMGLHRAAS*LVSPLG
Trigger: CCCTAAAGGTGAAACAAGCCATGATGCAGCTCTATG...CAAGCCCATTTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTTAGGGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR TCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAGGAGCACTGCAGCAATaGACTAGGACAGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPGALQQ*TRTVPQ
Trigger: CTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCC...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR TCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAACATAGCGCCGGGCGTTaGAGCGTTCAATGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKHSAGR*SVQCWH
Trigger: GTGCCAACATTGAACGCTTCAACGCCCGGCGCTATG...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAG +
Preference number: 2 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPGGWEH*SNELGQ
Trigger: CTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTCCTCACAGCACTGCTaGAGGCGGCACTGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYSSQHC*RRHCCC
Trigger: ACAGCAACAGTGCCGCCTGCAGCAGTGCTGTGAGGA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp TCCATCTGTGCCTGGACCTCTGCAATCGACGTGTACTTGTGCTGTTTCAGAGTCCCCCGTTTCTGCTGCTaGTCAATCAAGTCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: SICAWTSAIDVYLCCFRVPRFCC*SIKSEA
Trigger: TGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGG...GACTCTGAAACAGCACAAGTACACGTCGATTGCAGAGGTCCAGGCACAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGACGGCGGCCCCGTTTCTaGTGCTGCTCAATCAAGTCT +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRRRPRF*CCSIKS
Trigger: AGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCG...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTACATGGTCTTCATGTTaGTCTTTCGCCACTGCCGCC +
Preference number: 2 (lower is better)
Translates to: ALALILNSPPLQADKARITWSSC*SFATAA
Trigger: GGCGGCAGTGGCGAAAGAGCAACATGAAGACCATGT...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATTCGGAGCAGGACCCTaGGAACCAAGGGGAGGTCAA +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRFGAGP*EPRGGQ
Trigger: TTGACCTCCCCTTGGTTCCCAGGGTCCTGCTCCGAA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACTTTCGTGGATTGGCCTaGGCAGCCCCACCACTGTGT +
Preference number: 2 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDFRGLA*AAPPLC
Trigger: ACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAA...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRVLMLS*IGLGSP
Trigger: GGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGAC...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR GCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCGCATCTAGGTTGTCCTaGTTTATCAGAGCCTTGTGC +
Preference number: 2 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSASRLS*FIRALC
Trigger: GCACAAGGCTCTGATAAAGCAGGACAACCTAGATGC...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGACCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAA +
Preference number: 2 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRPPGGG*EHCSNE
Trigger: TTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGG...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATACCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAA +
Preference number: 2 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIPPGGG*EHCSNE
Trigger: TTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGG...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR CAA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTaGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCA +
Preference number: 2 (lower is better)
Translates to: DTDFLALALILNSPP*QADKARICMSREAS
Trigger: TGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR TCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGGAGCACTGCAGCAATaGACTAGGACAGTCCCACAG +
Preference number: 2 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIGALQQ*TRTVPQ
Trigger: CTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTTTGGCAAACACCAGGTaGTGGGCCATGTATTCAAAC +
Preference number: 2 (lower is better)
Translates to: ALALILNSPPLQADKARILANTR*WAMYSN
Trigger: GTTTGAATACATGGCCCAGCACCTGGTGTTTGCCAA...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR TCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTGGGCTGATTGTGAAATaGGCCAAAACCAACCATATC +
Preference number: 2 (lower is better)
Translates to: ALALILNSPPLQADKARIGLIVK*AKTNHI
Trigger: GATATGGTTGGTTTTGGCTCATTTCACAATCAGCCC...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATTGGTTACTGTCACCTaGTTCCAAACTCTCCGCCGT +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRLVTVT*FQTLRR
Trigger: ACGGCGGAGAGTTTGGAAGCAGGTGACAGTAACCAA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAACAGCTTTCCCAGCCTTaGGCTGATTGTGAAATGAGC +
Preference number: 2 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKQLSQP*ADCEMS
Trigger: GCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTG...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATACAGCTTTCCCAGCCTTaGGCTGATTGTGAAATGAGC +
Preference number: 2 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIQLSQP*ADCEMS
Trigger: GCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTG...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAGAAAAATGGCCCCTCTaGTTAAGGGAAGCTTCTCTT +
Preference number: 2 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPEKWPL*LREASL
Trigger: AAGAGAAGCTTCCCTTAACCAGAGGGGCCATTTTTC...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp ACACCACCAGCATCATTGTCCTTGAATGCTTCCACTTTGTCAGCTTGTTCAAGAGCAAACACCAGGTGCTaGGCCATGTATTCAAACTGG +
Preference number: 2 (lower is better)
Translates to: TPPASLSLNASTLSACSRANTRC*AMYSNW
Trigger: CCAGTTTGAATACATGGCCCAGCACCTGGTGTTTGC...TCTTGAACAAGCTGACAAAGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGCACCTTCTGGTAGATaGCAGACATGGTCTTCATGT +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRAPSGR*QTWSSC
Trigger: ACATGAAGACCATGTCTGCCATCTACCAGAAGGTGC...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGACCACTGCAAAATTTaGTCACCATCCCAAACAGCA +
Preference number: 2 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRDHCKI*SPSQTA
Trigger: TGCTGTTTGGGATGGTGACCAAATTTTGCAGTGGTC...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR TCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAATCCTCCTTTGCAAGCTaGCAAAGCAAGGATTTGTAT +
Preference number: 2 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKSSFAS*QSKDLY
Trigger: ATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGA...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGAAGTAAAGGAAGAATaGATCTCAGGCAGAGATGAC +
Preference number: 2 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIEVKEE*ISGRDD
Trigger: GTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR TCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCATCCTCCTTTGCAAGCTaGCAAAGCAAGGATTTGTAT +
Preference number: 2 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPSSFAS*QSKDLY
Trigger: ATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGA...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATGCTTTATCAGAGCCTaGTGCTCTCGGCGGCCCCGT +
Preference number: 3 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAACFIRA*CSRRPR
Trigger: ACGGGGCCGCCGAGAGCACAAGGCTCTGATAAAGCA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp TGTCACCTGCTTCCAAACTCTCCGCCGTCAGCTCTGGCAGCTCATGCACCACGCGCCCACGGGAGCCCTTaGGGGCAAGTCAGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: CHLLPNSPPSALAAHAPRAHGSP*GQVSLS
Trigger: TGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGGC...GCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAGAGTTTGGAAGCAGGTGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR TCA 72 bp CAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTaGAGCGTTCAATGTTGGCACGAAGGGCACACTCCT +
Preference number: 3 (lower is better)
Translates to: QGCCGPGHSAGR*SVQCWHEGHTP
Trigger: AGGAGTGTGCCCTTCGTGCCAACATTGAACGCTTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp TTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTaGCGCATGGTCCTCCACTCAGCCTTGTCACCCTCA +
Preference number: 3 (lower is better)
Translates to: LYSGEPSSALKV*RMVLHSALSPS
Trigger: TGAGGGTGACAAGGCTGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp TCCTCAGGGAGGTCCACCCGTTGGCCCAGGACACTCTaGAGGCAGTTGTCCACTGGCAGGAAGTCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: SSGRSTRWPRTL*RQLSTGRKSGL
Trigger: CAACCCTGACTTCCTGCCAGTGGACAACTGCCTGCAGAGTGTCCTGGGCCAACGGGTGGACCTCCCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCTCCCAGGAAATGGGCTaGGAGAAGACCTCCCTTTCT +
Preference number: 3 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSSQEMG*EKTSLS
Trigger: AGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGA...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp GGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAGTCCCACAGGTACCTT +
Preference number: 3 (lower is better)
Translates to: GAVLPPGGGWEH*SNELGQSHRYL
Trigger: AAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR GCA 72 bp CAGCCAGGGAGATGGCAGGCTTCCTCACAGCACTGCTaGAGGCGGCACTGTTGCTGTCCACTGGACAAAGGT +
Preference number: 3 (lower is better)
Translates to: QPGRWQASSQHC*RRHCCCPLDKG
Trigger: ACCTTTGTCCAGTGGACAGCAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp AGCCCTTTGGGGCAAGTCAGCCTGTCAGTCTGTGGGTaGTGTAGCGGGGGAGGCATCACTTCATCCCGTTCC +
Preference number: 3 (lower is better)
Translates to: SPLGQVSLSVCG*CSGGGITSSRS
Trigger: GGAACGGGATGAAGTGATGCCTCCCCCGCTACAGCACCCACAGACTGACAGGCTGACTTGCCCCAAAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 72 bp AGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAACTAGGACAGTCCCAC +
Preference number: 3 (lower is better)
Translates to: RHSGAVLPPGGG*EHCSNELGQSH
Trigger: GTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR GCA 72 bp TGTCAGCCAGGGAGATGGCAGGCTTCCTCACAGCACTaGTGCAGGCGGCACTGTTGCTGTCCACTGGACAAA +
Preference number: 3 (lower is better)
Translates to: CQPGRWQASSQH*CRRHCCCPLDK
Trigger: TTTGTCCAGTGGACAGCAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 72 bp ATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTaGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAA +
Preference number: 3 (lower is better)
Translates to: ISGRDDCFGAGP*EPRGGQAGLTQ
Trigger: TTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATTGAAGGCATCTAGGTaGTCCTGCTTTATCAGAGCC +
Preference number: 3 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAALKASR*SCFIRA
Trigger: GGCTCTGATAAAGCAGGACAACCTAGATGCCTTCAA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp AGGCCCAGGATGCTGCGCTTCTCAGCCTTCATGCTCTaGAGCTCCTCAAAGCCGCCTAGCGTGCACAATACT +
Preference number: 3 (lower is better)
Translates to: RPRMLRFSAFML*SSSKPPSVHNT
Trigger: AGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGCGCAGCATCCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp AGAGCCTTGTGCTCTCGGCGGCCCCGTTTCTGCTGCTaGTCAATCAAGTCTGAAGCAGATGCTGGTGGAGAG +
Preference number: 3 (lower is better)
Translates to: RALCSRRPRFCC*SIKSEADAGGE
Trigger: CTCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCGAGAGCACAAGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 72 bp ACTGTCACCTGCTTCCAAACTCTCCGCCGTCAGCTCTaGCAGCTCATGCACCACGCAGTGAGGGTAATCCAG +
Preference number: 3 (lower is better)
Translates to: TVTCFQTLRRQL*QLMHHAVRVIQ
Trigger: CTGGATTACCCTCACTGCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAGAGTTTGGAAGCAGGTGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR TCA 72 bp TCGGCGGCCCCGTTTCTGCTGCTGCTCAATCAAGTCTaGAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTT +
Preference number: 3 (lower is better)
Translates to: SAAPFLLLLNQV*SRCWWRGCSHV
Trigger: AACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR TCA 72 bp GGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCTaGAATTCAGATGCACGGCGGAGGGGTTCCCATCCC +
Preference number: 3 (lower is better)
Translates to: GFVCLERHQHDP*NSDARRRGSHP
Trigger: GGGATGGGAACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGACATACAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR CCA 72 bp GGATCTTCAGGAGGGCAATCATATACTGAGGCAGGCTaGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGA +
Preference number: 3 (lower is better)
Translates to: GSSGGQSYTEAG*GASLGRGFLQG
Trigger: TCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCTCAGTATATGATTGCCCTCCTGAAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 72 bp CTTGTGCTGTTTCAGAGTCTTGATGCTTTCGTGGATTaGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACT +
Preference number: 3 (lower is better)
Translates to: LVLFQSLDAFVD*PGQPHHCVRVT
Trigger: AGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 72 bp GTGTACTTGTGCTGTTTCAGAGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTG +
Preference number: 3 (lower is better)
Translates to: VYLCCFRVLMLS*IGLGSPTTVFV
Trigger: CACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGCACAAGTACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CCA 72 bp ACCAACAGCCTCACTGCAGCAGCTCTTCCCAGGAAATaGGCTTGGAGAAGACCTCCCTTTCTAACCAGAGGT +
Preference number: 3 (lower is better)
Translates to: TNSLTAAALPRK*AWRRPPFLTRG
Trigger: ACCTCTGGTTAGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR GCA 72 bp GCACCTTCTGGTAGATGGCAGACATGGTCTTCATGTTaGTCTTTCGCCACTGCCGCCCCAAGTATTTGGTCT +
Preference number: 3 (lower is better)
Translates to: APSGRWQTWSSC*SFATAAPSIWS
Trigger: AGACCAAATACTTGGGGCGGCAGTGGCGAAAGAGCAACATGAAGACCATGTCTGCCATCTACCAGAAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: ALALILNSPPLQADKARIMANGS*LYSGEP
Trigger: GGGCTCCCCGCTGTACAACAATGAGCCATTTGCCAT...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTTGCCGCCCCAAGTATTaGGTCTGTACCTTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: ALALILNSPPLQADKARICRPKY*VCTLSS
Trigger: GCTGCTCAAGGTACAGACCAAATACTTGGGGCGGCA...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCACGGGCATCAAGATCATaGCCGTATGCCCAGTCGTCG +
Preference number: 3 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPRASRS*PYAQSS
Trigger: CGACGACTGGGCATACGGCAATGATCTTGATGCCCG...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCGGTTTCTGCAGGGACTaGCTCAACTTCTTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSGFCRD*LNFFFS
Trigger: GGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACC...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR TCA 72 bp AAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATaGCCCCTGAAATTCAGATGCACGGCGGAGGGGTTC +
Preference number: 3 (lower is better)
Translates to: KARICMSREASA*PLKFRCTAEGF
Trigger: GAACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR-3UTR CAA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCATCCCCCTCCAGACTGTaGTCATCATCATTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPSPSRL*SSSFSS
Trigger: AGAGGAGAATGATGATGACAACAGTCTGGAGGGGGA...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATATCAGGTACATGATGTaGAGCAGGACCCTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYIRYMM*SRTLRS
Trigger: AGACCTCAGGGTCCTGCTCAACATCATGTACCTGAT...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp TCCTCAGGCAAGACGTCCGCTAGGATGTTGATTGAGTCTGTTTTGGCTTTTGAGATGTTGCGAATCACTTaGATGCTGTCCTCAGGAAGC +
Preference number: 3 (lower is better)
Translates to: SSGKTSARMLIESVLAFEMLRIT*MLSSGS
Trigger: GCTTCCTGAGGACAGCATCAAAGTGATTCGCAACAT...CTCAAAAGCCAAAACAGACTCAATCAACATCCTAGCGGACGTCTTGCCTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR-3UTR CAA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACGCAATCGACGTGTACTaGTGCTGTTTCAGAGTCTTG +
Preference number: 3 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDAIDVY*CCFRVL
Trigger: CAAGACTCTGAAACAGCACAAGTACACGTCGATTGC...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp CACTGGCAGGAAGTCAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTGAAACAGTGGGGCTGTGCTaGCACCTGGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: HWQEVRVAVGPVIAPGVETVGLC*HLVGDG
Trigger: CCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGT...TTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTGACTTCCTGCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCCCCACGGGAGCCCTTTaGGGCAAGTCAGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCPTGAL*GKSACQ
Trigger: CTGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGG...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCCTCCGAATAGCCCTCTaGGTCTTTGCGCTGGTTGCG +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSLRIAL*VFALVA
Trigger: CGCAACCAGCGCAAAGACTCAGAGGGCTATTCGGAG...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR GCA 90 bp CACTGGCAGGAAGTCAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTGAACTGTCAGTCTGTGGGTaGTGTAGCGGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: HWQEVRVAVGPVIAPGVELSVCG*CSGGGI
Trigger: GATGCCTCCCCCGCTACAGCACCCACAGACTGACAG...TTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTGACTTCCTGCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCTGGCCCAGGACACTCTaGAGGCAGTTGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCWPRTL*RQLSTG
Trigger: GCCAGTGGACAACTGCCTGCAGAGTGTCCTGGGCCA...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp CACTGGCAGGAAGTCAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTGAACATCCAGGAGCCTCATaGCATGGGTCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: HWQEVRVAVGPVIAPGVEHPGAS*HGSGAG
Trigger: ACCAGCACCGGACCCATGCCATGAGGCTCCTGGATG...TTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTGACTTCCTGCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSVLMLS*IGLGSP
Trigger: GGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGAC...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCCATAGCGCCGGGCGTTaGAGCGTTCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCHSAGR*SVQCWH
Trigger: GTGCCAACATTGAACGCTTCAACGCCCGGCGCTATG...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAAGCTCCGAGAGCTCTaGAGCCCACTTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSKLREL*SPLVCV
Trigger: GACACAGACAAGTGGGCTGCAGAGCTCTCGGAGCTT...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTCGGCTCTGAAGGTCTaGCGCATGGTCCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDSALKV*RMVLHS
Trigger: TGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCTCAGCCTTCATGCTCTaGAGCTCCTCAAAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSSAFML*SSSKPP
Trigger: AGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGA...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCAGGAGCCTCATGGCATaGGTCCGGTGCTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCRSLMA*VRCWLV
Trigger: TACCAACCAGCACCGGACCCATGCCATGAGGCTCCT...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCTGTCAGCCAGGGAGATaGCAGGCTTCCTCACAGCAC +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCCQPGR*QASSQH
Trigger: GTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTGACA...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGATGTGCTGCCACCTGGTaGGGGATGGGAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRCAATW*GMGALQ
Trigger: CTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACA...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAAAGCTCCGAGAGCTCTaGAGCCCACTTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAKLREL*SPLVCV
Trigger: GACACAGACAAGTGGGCTGCAGAGCTCTCGGAGCTT...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACATGGCATGGGTCCGGTaGTGGTTGGTATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDMAWVR*WLVSSS
Trigger: TGAGCTGGATACCAACCAGCACCGGACCCATGCCAT...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTCAGCCTTCATGCTCTaGAGCTCCTCAAAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDSAFML*SSSKPP
Trigger: AGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATTTATCAGAGCCTTGTaGTCTCGGCGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAFIRAL*SRRPRF
Trigger: GAAACGGGGCCGCCGAGAGCACAAGGCTCTGATAAA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTTTATCAGAGCCTTGTaGTCTCGGCGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDFIRAL*SRRPRF
Trigger: GAAACGGGGCCGCCGAGAGCACAAGGCTCTGATAAA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACTGTCAGTCTGTGGGTaGTGTAGCGGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRLSVCG*CSGGGI
Trigger: GATGCCTCCCCCGCTACAGCACCCACAGACTGACAG...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCACATGGTCTTCATGTTaGTCTTTCGCCACTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSTWSSC*SFATAA
Trigger: GGCGGCAGTGGCGAAAGAGCAACATGAAGACCATGT...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAG +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCGGWEH*SNELGQ
Trigger: CTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGTTTCGTGGATTGGCCTaGGCAGCCCCACCACTGTGT +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVFRGLA*AAPPLC
Trigger: ACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAA...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGTTCGGAGCAGGACCCTaGGAACCAAGGGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVFGAGP*EPRGGQ
Trigger: TTGACCTCCCCTTGGTTCCCAGGGTCCTGCTCCGAA...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGGGAGCACTGCAGCAATaGACTAGGACAGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVGALQQ*TRTVPQ
Trigger: CTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCC...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGAGCTTCCTCACAGCACTaGTGCAGGCGGCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRASSQH*CRRHCC
Trigger: ACAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGC...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000369796.5
CDS-3UTR GCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCGAGGGGCGTGACCACTaGAAAATTTGGTCACCATCC +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCEGRDH*KIWSPS
Trigger: GGATGGTGACCAAATTTTGCAGTGGTCACGCCCCTC...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCGGAGGCCCAGGATGCTaGGCTTCTCAGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALIGGPGC*ASQPSC
Trigger: GCATGAAGGCTGAGAAGCGCAGCATCCTGGGCCTCC...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACGGCGGCCCCGTTTCTaGTGCTGCTCAATCAAGTCT +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRRRPRF*CCSIKS
Trigger: AGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCG...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTTGCTCTTTCGCCACTaGCGCCCCAAGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDLLFRH*RPKYLV
Trigger: GACCAAATACTTGGGGCGGCAGTGGCGAAAGAGCAA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACAACCAACAGCCTCACTaGAGCAGCTCTTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDNQQPH*SSSSQE
Trigger: TTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTT...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCGCCCGGACCGCCGACTaGCGGCTCCATCTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSARTAD*RLHLGC
Trigger: GCAGCCAAGATGGAGCCGGCAGTCGGCGGTCCGGGC...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369795.8
CDS-3UTR GCA 90 bp CTCATTGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTTGCCAAGGCGGAAACTaGAGGGCGAACACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LIVVQRGAQLGSEGLPHGCQGGN*RANTAV
Trigger: CACTGCTGTGTTCGCCCTGCAGTTTCCGCCTTGGCA...ACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTCCCACGGGAGCCCTTTaGGGCAAGTCAGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVPTGAL*GKSACQ
Trigger: CTGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGG...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCTCAAAGGAATGCAGTTaGCAAACACCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSSKECS*QTPGAG
Trigger: CCCAGCACCTGGTGTTTGCCAACTGCATTCCTTTGA...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGCACACTCCTCTGCCTaGAAGTCCCAAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVAHSSA*KSQGRA
Trigger: TGCCCGGCCTTGGGACTTCCAGGCAGAGGAGTGTGC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTTGTGCTGCCACCTGGTaGGGGATGGGAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVCAATW*GMGALQ
Trigger: CTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACA...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCCAGCTTTCCCAGCCTTaGGCTGATTGTGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSQLSQP*ADCEMS
Trigger: GCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTG...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAGCTGTTTCAGAGTCTTaGTGCTTTCGTGGATTGGCC +
Preference number: 4 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAAVSES*CFRGLA
Trigger: GGCCAATCCACGAAAGCATCAAGACTCTGAAACAGC...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGGTCTGTTTTGGCTTTTaGGGTGGGTGCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVVCFGF*GGCCSQ
Trigger: TTGGCTGCAGCACCCACCTCAAAAGCCAAAACAGAC...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGAGATGGGGGCTGACTTaGACACCACCAGCATCATTG +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVRWGLT*TPPASL
Trigger: CAATGATGCTGGTGGTGTTCAAGTCAGCCCCCATCT...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACCATAGCGCCGGGCGTTaGAGCGTTCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNHSAGR*SVQCWH
Trigger: GTGCCAACATTGAACGCTTCAACGCCCGGCGCTATG...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCACCCCGTTTCTGCTGCTaGTCAATCAAGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAPRFCC*SIKSEA
Trigger: TGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGG...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCCACCCCCAGCTTCATaGTCTGCAACACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALIPPPAS*SATLWW
Trigger: CCACCACAGTGTTGCAGAGCATGAAGCTGGGGGTGG...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGAAGATCATTGCCGTATaGCCAGTCGTCGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVKIIAV*PVVVQP
Trigger: CGGCTGAACGACGACTGGGCATACGGCAATGATCTT...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCTGTCAGCCAGGGAGATaGCAGGCTTCCTCACAGCAC +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALICQPGR*QASSQH
Trigger: GTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTGACA...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGGATGCTTTCGTGGATTaGCCTGGGCAGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQDAFVD*PGQPHH
Trigger: GTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATC...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGATGCTTTCGTGGATTaGCCTGGGCAGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVDAFVD*PGQPHH
Trigger: GTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNVLMLS*IGLGSP
Trigger: GGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGAC...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCGCAAACACCAGGTGCTaGGCCATGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCANTRC*AMYSNW
Trigger: CCAGTTTGAATACATGGCCCAGCACCTGGTGTTTGC...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCGCACCTTCTGGTAGATaGCAGACATGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSAPSGR*QTWSSC
Trigger: ACATGAAGACCATGTCTGCCATCTACCAGAAGGTGC...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCACAGCTTTCCCAGCCTTaGGCTGATTGTGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAQLSQP*ADCEMS
Trigger: GCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTG...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVAPPKH*TCPPPG
Trigger: TCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGAGTCTGTTTTGGCTTTTaGGGTGGGTGCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRVCFGF*GGCCSQ
Trigger: TTGGCTGCAGCACCCACCTCAAAAGCCAAAACAGAC...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTGCGCTGGTTGCGGTTaGACTCGCGGGCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPCAGCG*TRGLCP
Trigger: GGGGCAAAGCCCGCGAGTTCAACCGCAACCAGCGCA...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR TCA 90 bp CTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTCTTCTTCTCCCCCTGAGATGCGCTGGTTGCGGTTaGACTCGCGGGCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: LGRGFLQGLAQLLLLPLRCAGCG*TRGLCP
Trigger: GGGGCAAAGCCCGCGAGTTCAACCGCAACCAGCGCA...TCTCAGGGGGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCCCAGGACTGCACCTCTaGCTCCGAGCTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIPGLHL*LRAALP
Trigger: GGGGAGTGCAGCTCGGAGGCAGAGGTGCAGTCCTGG...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGGCTTCCTCACAGCACTaGTGCAGGCGGCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGASSQH*CRRHCC
Trigger: ACAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGC...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000369796.5
CDS-3UTR GCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGTCGGCTCTGAAGGTCTaGCGCATGGTCCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQSALKV*RMVLHS
Trigger: TGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGA...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGAGCTTCTCAGCCTTCATaGTCTGCAGCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRASQPS*SAAPQS
Trigger: GCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGC...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGGGTGCTGCAGCCAACAGGATCTTCAGGAGGGCAATCATATACTGAGGCAGGCGGAGGCCCAGGATGCTaGGCTTCTCAGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: WVLQPTGSSGGQSYTEAGGGPGC*ASQPSC
Trigger: GCATGAAGGCTGAGAAGCGCAGCATCCTGGGCCTCC...GCCTGCCTCAGTATATGATTGCCCTCCTGAAGATCCTGTTGGCTGCAGCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTTATCAGAGCCTTGTaGTCTCGGCGGCCCCGTTTC +
Preference number: 4 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNFIRAL*SRRPRF
Trigger: GAAACGGGGCCGCCGAGAGCACAAGGCTCTGATAAA...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAGCATCTAGGTTGTCCTaGTTTATCAGAGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAASRLS*FIRALC
Trigger: GCACAAGGCTCTGATAAAGCAGGACAACCTAGATGC...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTTGGCAAACACCAGGTaGTGGGCCATGTATTCAAAC +
Preference number: 4 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDLANTR*WAMYSN
Trigger: GTTTGAATACATGGCCCAGCACCTGGTGTTTGCCAA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp CAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTCCTCCACTCAGCTTAGGATCAAAGGAATaGAGTTGGCAAACACCAGGT +
Preference number: 4 (lower is better)
Translates to: QRGAQLGSEGLPHGPPLSLGSKE*SWQTPG
Trigger: ACCTGGTGTTTGCCAACTGCATTCCTTTGATCCTAA...GCTGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGATTGCTCTTTCGCCACTaGCGCCCCAAGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRLLFRH*RPKYLV
Trigger: GACCAAATACTTGGGGCGGCAGTGGCGAAAGAGCAA...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGTCAGGCAGAGATGACTaGTTCGGAGCAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGSGRDD*FGAGPW
Trigger: CCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGA...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCATATGTCAGTCTTGTaGCTGGCCTCCTGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALIHMSVL*LASCQG
Trigger: GCCTTGGCAGGAGGCCAGGCACAAGACTGACATATG...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCTTCTTGTCTGTCACATaGATCCGGAAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCFLSVT*IRKSSS
Trigger: TGAGGAGGACTTCCGGATCCATGTGACAGACAAGAA...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGCATGGGTCCGGTGCTaGTTGGTATCCAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVAWVRC*LVSSSV
Trigger: GACTGAGCTGGATACCAACCAGCACCGGACCCATGC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGCATCAAGATCATTGCCGTATGCCCAGTCGTCGTTCAGCCGATGCCGCACCTTGCATGGGTCCGGTGCTaGTTGGTATCCAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GIKIIAVCPVVVQPMPHLAWVRC*LVSSSV
Trigger: GACTGAGCTGGATACCAACCAGCACCGGACCCATGC...AAGGTGCGGCATCGGCTGAACGACGACTGGGCATACGGCAATGATCTTGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GCTGCGGCTGGACTCAAGGAACATCTCAATGTCTTTCTCTCTGACCTTGGGAGCGTTGTTCACGATCAGTaGGCCCGGACCGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: AAAGLKEHLNVFLSDLGSVVHDQ*ARTADC
Trigger: GCAGTCGGCGGTCCGGGCCCACTGATCGTGAACAAC...GCTCCCAAGGTCAGAGAGAAAGACATTGAGATGTTCCTTGAGTCCAGCCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp CAGTCCCCTAACCAACAGCCTCACTGCAGCAGCTCTTCCCAGGAAATGGGCTTGGGAGCACTGCAGCAATaGACTAGGACAGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: QSPNQQPHCSSSSQEMGLGALQQ*TRTVPQ
Trigger: CTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCC...CAAGCCCATTTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTTAGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCAGCAACATAGAGAATTaGTCGAGCCACCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCSNIEN*SSHLES
Trigger: AGACTCAAGGTGGCTCGAGCAATTCTCTATGTTGCT...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGTTGGTAGAGGGTTTCTaGAGGGACTTGCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVLVEGF*RDLLNF
Trigger: GAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAA...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGTTGGCAAACACCAGGTaGTGGGCCATGTATTCAAAC +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVLANTR*WAMYSN
Trigger: GTTTGAATACATGGCCCAGCACCTGGTGTTTGCCAA...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGTCACCTGCTTCCAAACTCTCCGCCGTCAGCTCTGGCAGCTCATGCACCACGCTTGGTTACTGTCACCTaGTTCCAAACTCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: CHLLPNSPPSALAAHAPRLVTVT*FQTLRR
Trigger: ACGGCGGAGAGTTTGGAAGCAGGTGACAGTAACCAA...GCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAGAGTTTGGAAGCAGGTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCACATGGTCTTCATGTTaGTCTTTCGCCACTGCCGCC +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALITWSSC*SFATAA
Trigger: GGCGGCAGTGGCGAAAGAGCAACATGAAGACCATGT...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCAACCAACAGCCTCACTaGAGCAGCTCTTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALINQQPH*SSSSQE
Trigger: TTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTT...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAG +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGGGWEH*SNELGQ
Trigger: CTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGGGGGGATGGGAGCACTaGAGCAATGAACTAGGACAG +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQGGWEH*SNELGQ
Trigger: CTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCTCTGCAACACTGTGGTaGGCATCTCCTCAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALISATLW*ASPQAR
Trigger: TCTTGCCTGAGGAGATGCCCACCACAGTGTTGCAGA...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTCTCCGCCGTCAGCTCTaGCAGCTCATGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQALRRQL*QLMHHA
Trigger: TGCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAG...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCCTCCGCCGTCAGCTCTaGCAGCTCATGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIILRRQL*QLMHHA
Trigger: TGCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAG...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGGCTCTTCCCAGGAAATaGGCTTGGAGAAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGALPRK*AWRRPP
Trigger: GGGAGGTCTTCTCCAAGCCCATTTCCTGGGAAGAGC...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCGTTGTTCACGATCAGTaGGCCCGGACCGCCGACTGC +
Preference number: 4 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSVVHDQ*ARTADC
Trigger: GCAGTCGGCGGTCCGGGCCCACTGATCGTGAACAAC...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGTCTGAGTCTTTGCGCTaGTTGCGGTTGAACTCGCGG +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQSESLR*LRLNSR
Trigger: CCGCGAGTTCAACCGCAACCAGCGCAAAGACTCAGA...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR TCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTGCTCAATCAAGTCTaGAGCAGATGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALILLNQV*SRCWWR
Trigger: TCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAG...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TGGGTGCTGCAGCCAACAGGATCTTCAGGAGGGCAATCATATACTGAGGCAGGCAGGGATCCCGCTCGTTaGAGGCATCTAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: WVLQPTGSSGGQSYTEAGRDPAR*RHLGCP
Trigger: AGGACAACCTAGATGCCTTCAACGAGCGGGATCCCT...GCCTGCCTCAGTATATGATTGCCCTCCTGAAGATCCTGTTGGCTGCAGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGAGATGGGGGCTGACTTaGACACCACCAGCATCATTG +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGRWGLT*TPPASL
Trigger: CAATGATGCTGGTGGTGTTCAAGTCAGCCCCCATCT...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGCTTCAAGATGGGGGCTaGCTTGAACACCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQLQDGG*LEHHQH
Trigger: ATGCTGGTGGTGTTCAAGTCAGCCCCCATCTTGAAG...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGCGAGAGGCATCAGCATaGCCCCTGAAATTCAGATGC +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQREASA*PLKFRC
Trigger: GCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCG...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCTCCTCCTTTGCAAGCTaGCAAAGCAAGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCSSFAS*QSKDLY
Trigger: ATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGA...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCCCTCTGCCTCCGAGCTaGACTCCCCAAACGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSPLPPS*TPQTCL
Trigger: AAGGCACGTTTGGGGAGTGCAGCTCGGAGGCAGAGG...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCGGAGGCCCAGGATGCTaGGCTTCTCAGCCTTCATGC +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFGGPGC*ASQPSC
Trigger: GCATGAAGGCTGAGAAGCGCAGCATCCTGGGCCTCC...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTTGCTGGTGGAGAGGCTaGTCTCATGTTGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVCWWRG*SHVANH
Trigger: GTGATTCGCAACATGAGAGCAGCCTCTCCACCAGCA...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGTGCTGGTGGAGAGGCTaGTCTCATGTTGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGCWWRG*SHVANH
Trigger: GTGATTCGCAACATGAGAGCAGCCTCTCCACCAGCA...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTCTGTGCCTGGACCTCTaGAATCGACGTGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVLCLDL*NRRVLV
Trigger: CACAAGTACACGTCGATTGCAGAGGTCCAGGCACAG...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCTTGGTTACTGTCACCTaGTTCCAAACTCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALILVTVT*FQTLRR
Trigger: ACGGCGGAGAGTTTGGAAGCAGGTGACAGTAACCAA...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGAAGATCATTGCCGTATaGCCAGTCGTCGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGKIIAV*PVVVQP
Trigger: CGGCTGAACGACGACTGGGCATACGGCAATGATCTT...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCCATCCAGGAGCCTCATaGCATGGGTCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFHPGAS*HGSGAG
Trigger: ACCAGCACCGGACCCATGCCATGAGGCTCCTGGATG...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCCCCACGGGAGCCCTTTaGGGCAAGTCAGCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPPTGAL*GKSACQ
Trigger: CTGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGG...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACAATACTGTCTTCCAGAGCAGCATCCTCCATCTGTGCCTaGACCTCTGCAATCGACGTG +
Preference number: 4 (lower is better)
Translates to: SAAPQSRLACTILSSRAASSICA*TSAIDV
Trigger: CACGTCGATTGCAGAGGTCCAGGCACAGATGGAGGA...TGCTGCTCTGGAAGACAGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTTATACTGAGGCAGGCTaGGGAGCAAGCCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVYTEAG*GASLGR
Trigger: TCTACCAAGGCTTGCTCCCCAGCCTGCCTCAGTATA...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTTTGGCTTTTGAGGTaGGTGCTGCAGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNFWLLR*VLQPTG
Trigger: TCCTGTTGGCTGCAGCACCCACCTCAAAAGCCAAAA...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTCTCCGCCGTCAGCTCTaGCAGCTCATGCACCACGCA +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARILRRQL*QLMHHA
Trigger: TGCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAG...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGTTCCTCCAGCAAAATTaGTTACTGTCACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVFLQQN*LLSPAS
Trigger: GGAAGCAGGTGACAGTAACCAATTTTGCTGGAGGAA...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCATAGAGCTGCATCATaGCTTGTTTCACCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVHRAAS*LVSPLG
Trigger: CCCTAAAGGTGAAACAAGCCATGATGCAGCTCTATG...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTGCACACTCCTCTGCCTaGAAGTCCCAAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARIAHSSA*KSQGRA
Trigger: TGCCCGGCCTTGGGACTTCCAGGCAGAGGAGTGTGC...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACAATACTGTCTTCCAGAGCAGCACAGGCAGTTGTCCACTaGCAGGAAGTCAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: SAAPQSRLACTILSSRAAQAVVH*QEVRVA
Trigger: AGCAACCCTGACTTCCTGCCAGTGGACAACTGCCTG...TGCTGCTCTGGAAGACAGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTTGTGCTGCCACCTGGTaGGGGATGGGAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARICAATW*GMGALQ
Trigger: CTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACA...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGGAAAAATGGCCCCTCTaGTTAAGGGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVEKWPL*LREASL
Trigger: AAGAGAAGCTTCCCTTAACCAGAGGGGCCATTTTTC...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR CAA 72 bp ACCATCCCAAACAGCATGATGGCAAATGGCTCATTGTaGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TIPNSMMANGSL*YSGEPSSALKV
Trigger: GACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CAA 72 bp GTCACCATCCCAAACAGCATGATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VTIPNSMMANGS*LYSGEPSSALK
Trigger: CTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCTTCTTCTTCTCCCCCTaGGAGAGGGGAGCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIFFFSP*ERGAEV
Trigger: TACCTCCGCTCCCCTCTCTCAGGGGGAGAAGAAGAA...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTCTTCTTCTCCCCCTaGGAGAGGGGAGCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSFFFSP*ERGAEV
Trigger: TACCTCCGCTCCCCTCTCTCAGGGGGAGAAGAAGAA...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACCGTCCGCTAGGATGTTaGTTGAGTCTGTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNRPLGC*LSLFWL
Trigger: AAGCCAAAACAGACTCAATCAACATCCTAGCGGACG...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCTCCACTGGACAAAGGTaGCACAGGCAAGGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFSTGQR*HRQGQA
Trigger: TGCCTGGCCTTGCCTGTGTCACCTTTGTCCAGTGGA...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTCTGTCAGTCTGTGGGTaGTGTAGCGGGGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARILSVCG*CSGGGI
Trigger: GATGCCTCCCCCGCTACAGCACCCACAGACTGACAG...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAACAGTGGGGCTGTGCTaGCACCTGGTGGGGGATGGG +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRTVGLC*HLVGDG
Trigger: CCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGT...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCTCAGGCAGAGATGACTaGTTCGGAGCAGGACCCTGG +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIISGRDD*FGAGPW
Trigger: CCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGA...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCGCTTCCTCACAGCACTaGTGCAGGCGGCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPASSQH*CRRHCC
Trigger: GCAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGC...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGCATGGGTCCGGTGCTaGTTGGTATCCAGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQAAWVRC*LVSSSV
Trigger: GACTGAGCTGGATACCAACCAGCACCGGACCCATGC...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCCATCCAGGAGCCTCATaGCATGGGTCCGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPHPGAS*HGSGAG
Trigger: ACCAGCACCGGACCCATGCCATGAGGCTCCTGGATG...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTGTCAGCCAGGGAGATaGCAGGCTTCCTCACAGCAC +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQACQPGR*QASSQH
Trigger: GTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTGACA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCAGCATGATGGCAAATaGCTCATTGTTGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALIQHDGK*LIVVQR
Trigger: CCGCTGTACAACAATGAGCCATTTGCCATCATGCTG...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGATTCCTCCAGCAAAATTaGTTACTGTCACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRFLQQN*LLSPAS
Trigger: GGAAGCAGGTGACAGTAACCAATTTTGCTGGAGGAA...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TCGTGGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACTGCCTAGAGTGCATAGAGCTGCATCATaGCTTGTTTCACCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: SWIGLGSPTTVFVSLPRVHRAAS*LVSPLG
Trigger: CCCTAAAGGTGAAACAAGCCATGATGCAGCTCTATG...CACTCTAGGCAGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp CTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTCTTCTTCTCCCCCTGAGACCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: LGRGFLQGLAQLLLLPLRPPGGG*EHCSNE
Trigger: TTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGG...TCTCAGGGGGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000485775.5
3UTR CAA 72 bp TCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTaGCGAATCACTTTGATGCTGTCCTCAGGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: SEADAGGEAALM*RITLMLSSGSG
Trigger: CCCGCTTCCTGAGGACAGCATCAAAGTGATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCTTGCTCGAGCCACCTTaGGTCTCTTCTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPLLEPP*VSSPWQ
Trigger: CTGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCAA...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCAGGGATCCCGCTCGTTaGAGGCATCTAGGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSRDPAR*RHLGCP
Trigger: AGGACAACCTAGATGCCTTCAACGAGCGGGATCCCT...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACAATACTGTCTTCCAGAGCAGCAGCTGTTTCAGAGTCTTaGTGCTTTCGTGGATTGGCC +
Preference number: 4 (lower is better)
Translates to: SAAPQSRLACTILSSRAAAVSES*CFRGLA
Trigger: GGCCAATCCACGAAAGCATCAAGACTCTGAAACAGC...TGCTGCTCTGGAAGACAGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGCGTCCGCTAGGATGTTaGTTGAGTCTGTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGRPLGC*LSLFWL
Trigger: AAGCCAAAACAGACTCAATCAACATCCTAGCGGACG...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCCATAGCGCCGGGCGTTaGAGCGTTCAATGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPHSAGR*SVQCWH
Trigger: GTGCCAACATTGAACGCTTCAACGCCCGGCGCTATG...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTTGCGAATCCTCCGAATAGCCCTCTaGGTCTTTGCGCTGGTTGCG +
Preference number: 4 (lower is better)
Translates to: SIKSEADAGGEAALMLRILRIAL*VFALVA
Trigger: CGCAACCAGCGCAAAGACTCAGAGGGCTATTCGGAG...GATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGACCAGGACTGCACCTCTaGCTCCGAGCTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRPGLHL*LRAALP
Trigger: GGGGAGTGCAGCTCGGAGGCAGAGGTGCAGTCCTGG...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATACCAGGACTGCACCTCTaGCTCCGAGCTGCACTCCCC +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIPGLHL*LRAALP
Trigger: GGGGAGTGCAGCTCGGAGGCAGAGGTGCAGTCCTGG...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTTCGGCTCTGAAGGTCTaGCGCATGGTCCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARISALKV*RMVLHS
Trigger: TGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGA...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTTGCGAATCGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACT +
Preference number: 4 (lower is better)
Translates to: SIKSEADAGGEAALMLRIGSGAG*YPAQST
Trigger: AGTGGACTGAGCTGGATACCAACCAGCACCGGACCC...GATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCAGGAGCCTCATGGCATaGGTCCGGTGCTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPRSLMA*VRCWLV
Trigger: TACCAACCAGCACCGGACCCATGCCATGAGGCTCCT...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGCAGCATGATGGCAAATaGCTCATTGTTGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQQHDGK*LIVVQR
Trigger: CCGCTGTACAACAATGAGCCATTTGCCATCATGCTG...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTCCATCTGTGCCTaGACCTCTGCAATCGACGTG +
Preference number: 4 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSSSICA*TSAIDV
Trigger: CACGTCGATTGCAGAGGTCCAGGCACAGATGGAGGA...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTCCTCCATCTGTGCCTaGACCTCTGCAATCGACGTG +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQASSICA*TSAIDV
Trigger: CACGTCGATTGCAGAGGTCCAGGCACAGATGGAGGA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGCACCTTCTGGTAGATaGCAGACATGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVAPSGR*QTWSSC
Trigger: ACATGAAGACCATGTCTGCCATCTACCAGAAGGTGC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGGCACCTTCTGGTAGATaGCAGACATGGTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQAPSGR*QTWSSC
Trigger: ACATGAAGACCATGTCTGCCATCTACCAGAAGGTGC...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCGCTCTTCCCAGGAAATaGGCTTGGAGAAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIALPRK*AWRRPP
Trigger: GGGAGGTCTTCTCCAAGCCCATTTCCTGGGAAGAGC...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTGCTCTTCCCAGGAAATaGGCTTGGAGAAGACCTCCC +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPALPRK*AWRRPP
Trigger: GGGAGGTCTTCTCCAAGCCCATTTCCTGGGAAGAGC...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCCCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPPPGGG*EHCSNE
Trigger: TTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGG...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCGAAAAATGGCCCCTCTaGTTAAGGGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TPTPEHNQDTDFLALALIEKWPL*LREASL
Trigger: AAGAGAAGCTTCCCTTAACCAGAGGGGCCATTTTTC...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
3UTR CAA 72 bp GGCAAGACGTCCGCTAGGATGTTGATTGAGTCTGTTTaGGCTTTTGAGGTGGGTGCTGCAGCCAACAGGATC +
Preference number: 4 (lower is better)
Translates to: GKTSARMLIESV*AFEVGAAANRI
Trigger: GATCCTGTTGGCTGCAGCACCCACCTCAAAAGCCAAAACAGACTCAATCAACATCCTAGCGGACGTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTAGATGGGGGCTGACTTaGACACCACCAGCATCATTG +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQARWGLT*TPPASL
Trigger: CAATGATGCTGGTGGTGTTCAAGTCAGCCCCCATCT...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCGAGGGGCGTGACCACTaGAAAATTTGGTCACCATCC +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFEGRDH*KIWSPS
Trigger: GGATGGTGACCAAATTTTGCAGTGGTCACGCCCCTC...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCACGGCGGCCCCGTTTCTaGTGCTGCTCAATCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPRRPRF*CCSIKS
Trigger: AGACTTGATTGAGCAGCAGCAGAAACGGGGCCGCCG...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTCTGTGCCTGGACCTCTaGAATCGACGTGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQALCLDL*NRRVLV
Trigger: CACAAGTACACGTCGATTGCAGAGGTCCAGGCACAG...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCTTGCTCTTTCGCCACTaGCGCCCCAAGTATTTGGTC +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIILLFRH*RPKYLV
Trigger: GACCAAATACTTGGGGCGGCAGTGGCGAAAGAGCAA...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCACATGGTCTTCATGTTaGTCTTTCGCCACTGCCGCC +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIITWSSC*SFATAA
Trigger: GGCGGCAGTGGCGAAAGAGCAACATGAAGACCATGT...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCGGGCATCAAGATCATTaGCGTATGCCCAGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFGHQDH*RMPSRR
Trigger: ACGACGACTGGGCATACGGCAATGATCTTGATGCCC...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATGGCCCAGGACACTCTaGAGGCAGTTGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRWPRTL*RQLSTG
Trigger: GCCAGTGGACAACTGCCTGCAGAGTGTCCTGGGCCA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTTGTGCCTGGCCTCCTaGCAAGGCGGAAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYLCLAS*QGGNCR
Trigger: CCTGCAGTTTCCGCCTTGGCAGGAGGCCAGGCACAA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTATACTGAGGCAGGCTaGGGAGCAAGCCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPYTEAG*GASLGR
Trigger: TCTACCAAGGCTTGCTCCCCAGCCTGCCTCAGTATA...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTCTGCAACACTGTGGTaGGCATCTCCTCAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQASATLW*ASPQAR
Trigger: TCTTGCCTGAGGAGATGCCCACCACAGTGTTGCAGA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGCATAGAGCTGCATCATaGCTTGTTTCACCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGHRAAS*LVSPLG
Trigger: CCCTAAAGGTGAAACAAGCCATGATGCAGCTCTATG...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGCACACTCCTCTGCCTaGAAGTCCCAAGGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIAHSSA*KSQGRA
Trigger: TGCCCGGCCTTGGGACTTCCAGGCAGAGGAGTGTGC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCCAGGCAGTTGTCCACTaGCAGGAAGTCAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPQAVVH*QEVRVA
Trigger: AGCAACCCTGACTTCCTGCCAGTGGACAACTGCCTG...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCGGCAAGGCCAGGCACTaGTTGAGCCCATATGTCAGT +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPGKARH*LSPYVS
Trigger: ACTGACATATGGGCTCAACCAGTGCCTGGCCTTGCC...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCCTGCTCAATCAAGTCTaGAGCAGATGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIILLNQV*SRCWWR
Trigger: TCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAG...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTCTTCAAGATGGGGGCTaGCTTGAACACCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARILQDGG*LEHHQH
Trigger: ATGCTGGTGGTGTTCAAGTCAGCCCCCATCTTGAAG...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTTGCGAATCCTTCAAGATGGGGGCTaGCTTGAACACCACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SIKSEADAGGEAALMLRILQDGG*LEHHQH
Trigger: ATGCTGGTGGTGTTCAAGTCAGCCCCCATCTTGAAG...GATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTCGAGAGGCATCAGCATaGCCCCTGAAATTCAGATGC +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARIREASA*PLKFRC
Trigger: GCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCG...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGTCCTCCTTTGCAAGCTaGCAAAGCAAGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGSSFAS*QSKDLY
Trigger: ATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGA...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TCCTCAGGCAAGACGTCCGCTAGGATGTTGATTGAGTCTGTTTTGGCTTTTGAGAAGCTCCGAGAGCTCTaGAGCCCACTTGTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: SSGKTSARMLIESVLAFEKLREL*SPLVCV
Trigger: GACACAGACAAGTGGGCTGCAGAGCTCTCGGAGCTT...CTCAAAAGCCAAAACAGACTCAATCAACATCCTAGCGGACGTCTTGCCTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGACCTCTGCCTCCGAGCTaGACTCCCCAAACGTGCCTT +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRPLPPS*TPQTCL
Trigger: AAGGCACGTTTGGGGAGTGCAGCTCGGAGGCAGAGG...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ACACCACCAGCATCATTGTCCTTGAATGCTTCCACTTTGTCAGCTTGTTCAAGACCTCTGCCTCCGAGCTaGACTCCCCAAACGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TPPASLSLNASTLSACSRPLPPS*TPQTCL
Trigger: AAGGCACGTTTGGGGAGTGCAGCTCGGAGGCAGAGG...TCTTGAACAAGCTGACAAAGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCGCTTCTCAGCCTTCATaGTCTGCAGCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPASQPS*SAAPQS
Trigger: GCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGC...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCTGCTGGTGGAGAGGCTaGTCTCATGTTGCGAATCAC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPCWWRG*SHVANH
Trigger: GTGATTCGCAACATGAGAGCAGCCTCTCCACCAGCA...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCCCGTTTCTGCTGCTaGTCAATCAAGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPPRFCC*SIKSEA
Trigger: TGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGG...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GCTGCGGCTGGACTCAAGGAACATCTCAATGTCTTTCTCTCTGACCTTGGGAGCGCATCTAGGTTGTCCTaGTTTATCAGAGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: AAAGLKEHLNVFLSDLGSASRLS*FIRALC
Trigger: GCACAAGGCTCTGATAAAGCAGGACAACCTAGATGC...GCTCCCAAGGTCAGAGAGAAAGACATTGAGATGTTCCTTGAGTCCAGCCGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCCTGTGCCTGGACCTCTaGAATCGACGTGTACTTGTG +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPLCLDL*NRRVLV
Trigger: CACAAGTACACGTCGATTGCAGAGGTCCAGGCACAG...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAACCACCCCCAGCTTCATaGTCTGCAACACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKPPPAS*SATLWW
Trigger: CCACCACAGTGTTGCAGAGCATGAAGCTGGGGGTGG...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GCTGCGGCTGGACTCAAGGAACATCTCAATGTCTTTCTCTCTGACCTTGGGAGCTTGGCAAACACCAGGTaGTGGGCCATGTATTCAAAC +
Preference number: 4 (lower is better)
Translates to: AAAGLKEHLNVFLSDLGSLANTR*WAMYSN
Trigger: GTTTGAATACATGGCCCAGCACCTGGTGTTTGCCAA...GCTCCCAAGGTCAGAGAGAAAGACATTGAGATGTTCCTTGAGTCCAGCCGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAAGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACT +
Preference number: 4 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKGSGAG*YPAQST
Trigger: AGTGGACTGAGCTGGATACCAACCAGCACCGGACCC...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTTTCGTGGATTGGCCTaGGCAGCCCCACCACTGTGT +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYFRGLA*AAPPLC
Trigger: ACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCGCAAACACCAGGTGCTaGGCCATGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFANTRC*AMYSNW
Trigger: CCAGTTTGAATACATGGCCCAGCACCTGGTGTTTGC...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTCAAAGGAATGCAGTTaGCAAACACCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPSKECS*QTPGAG
Trigger: CCCAGCACCTGGTGTTTGCCAACTGCATTCCTTTGA...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGACCACCTGGTGGGGGATaGGAGCACTGCAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRPPGGG*EHCSNE
Trigger: TTCATTGCTGCAGTGCTCCCATCCCCCACCAGGTGG...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACTGTCAGTCTTGTGCCTaGCCTCCTGCCAAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDCQSCA*PPAKAE
Trigger: TTCCGCCTTGGCAGGAGGCCAGGCACAAGACTGACA...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGATTGCTCGAGCCACCTTaGGTCTCTTCTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRLLEPP*VSSPWQ
Trigger: CTGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCAA...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIAPPKH*TCPPPG
Trigger: TCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATATTCTTCTTCTCCCCCTaGGAGAGGGGAGCGGAGGTA +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIFFFSP*ERGAEV
Trigger: TACCTCCGCTCCCCTCTCTCAGGGGGAGAAGAAGAA...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAGTCTGTTTTGGCTTTTaGGGTGGGTGCTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPVCFGF*GGCCSQ
Trigger: TTGGCTGCAGCACCCACCTCAAAAGCCAAAACAGAC...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACAATACTGTCTTCCAGAGCAGCAAGATCCGAAGCAGATTaGTACAAGAAAAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SAAPQSRLACTILSSRAARSEAD*YKKRGS
Trigger: GGAACCTCTTTTCTTGTATCAATCTGCTTCGGATCT...TGCTGCTCTGGAAGACAGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAATGGCATGGGTCCGGTaGTGGTTGGTATCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRMAWVR*WLVSSS
Trigger: TGAGCTGGATACCAACCAGCACCGGACCCATGCCAT...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTCAGCCTTCATGCTCTaGAGCTCCTCAAAGCCGCCT +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYSAFML*SSSKPP
Trigger: AGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGCATCTAGGTTGTCCTaGTTTATCAGAGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQAASRLS*FIRALC
Trigger: GCACAAGGCTCTGATAAAGCAGGACAACCTAGATGC...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTGTTTCTGCAGGGACTTaGTCAACTTCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPVSAGT*STSSSP
Trigger: GGGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAAC...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATATCCTCACAGCACTGCTaGAGGCGGCACTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDISSQHC*RRHCCC
Trigger: ACAGCAACAGTGCCGCCTGCAGCAGTGCTGTGAGGA...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTTCTTGTCTGTCACATaGATCCGGAAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQAFLSVT*IRKSSS
Trigger: TGAGGAGGACTTCCGGATCCATGTGACAGACAAGAA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACT +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIGSGAG*YPAQST
Trigger: AGTGGACTGAGCTGGATACCAACCAGCACCGGACCC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAAGGAGCCTCATGGCATaGGTCCGGTGCTGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIRSLMA*VRCWLV
Trigger: TACCAACCAGCACCGGACCCATGCCATGAGGCTCCT...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCCAGCATGATGGCAAATaGCTCATTGTTGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIQHDGK*LIVVQR
Trigger: CCGCTGTACAACAATGAGCCATTTGCCATCATGCTG...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGATTTCGTGGATTGGCCTaGGCAGCCCCACCACTGTGT +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRFRGLA*AAPPLC
Trigger: ACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAA...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATGCTCTGCAACACTGTaGTGGGCATCTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRCSATL*WASPQA
Trigger: TGCCTGAGGAGATGCCCACCACAGTGTTGCAGAGCA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACTGCTCTGCAACACTGTaGTGGGCATCTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDCSATL*WASPQA
Trigger: TGCCTGAGGAGATGCCCACCACAGTGTTGCAGAGCA...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGACAGGCAGTTGTCCACTaGCAGGAAGTCAGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRQAVVH*QEVRVA
Trigger: AGCAACCCTGACTTCCTGCCAGTGGACAACTGCCTG...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATCTGAGTCTTTGCGCTaGTTGCGGTTGAACTCGCGG +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRSESLR*LRLNSR
Trigger: CCGCGAGTTCAACCGCAACCAGCGCAAAGACTCAGA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR TCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAAAACTCCAGGTCTGGTaGCTCCGAATAGCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPKLQVW*LRIALY
Trigger: ATACAGGGCTATTCGGAGTCACCAGACCTGGAGTTT...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369796.5
CDS-3UTR GCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTAGCAACATAGAGAATTaGTCGAGCCACCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQASNIEN*SSHLES
Trigger: AGACTCAAGGTGGCTCGAGCAATTCTCTATGTTGCT...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAAGAGGGGCGTGACCACTaGAAAATTTGGTCACCATCC +
Preference number: 4 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKEGRDH*KIWSPS
Trigger: GGATGGTGACCAAATTTTGCAGTGGTCACGCCCCTC...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATGCTTCTCAGCCTTCATaGTCTGCAGCTCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYASQPS*SAAPQS
Trigger: GCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGC...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCACCCCGTTTCTGCTGCTaGTCAATCAAGTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPPRFCC*SIKSEA
Trigger: TGCTTCAGACTTGATTGAGCAGCAGCAGAAACGGGG...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCTTGGTAGAGGGTTTCTaGAGGGACTTGCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPLVEGF*RDLLNF
Trigger: GAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAA...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCATTGGTTACTGTCACCTaGTTCCAAACTCTCCGCCGT +
Preference number: 4 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPLVTVT*FQTLRR
Trigger: ACGGCGGAGAGTTTGGAAGCAGGTGACAGTAACCAA...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAAAAGATCATTGCCGTATaGCCAGTCGTCGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKKIIAV*PVVVQP
Trigger: CGGCTGAACGACGACTGGGCATACGGCAATGATCTT...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGGGCATCAAGATCATTaGCGTATGCCCAGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRGHQDH*RMPSRR
Trigger: ACGACGACTGGGCATACGGCAATGATCTTGATGCCC...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCATGGCCCAGGACACTCTaGAGGCAGTTGTCCACTGGC +
Preference number: 4 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPWPRTL*RQLSTG
Trigger: GCCAGTGGACAACTGCCTGCAGAGTGTCCTGGGCCA...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAAACCAACAGCCTCACTaGAGCAGCTCTTCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRNQQPH*SSSSQE
Trigger: TTCCTGGGAAGAGCTGCTGCAGTGAGGCTGTTGGTT...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCATTCATCAGGAATTCTaGCCCTTCCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIIHQEF*PFRVAV
Trigger: TACAGCTACACGGAAGGGCCAGAATTCCTGATGAAT...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTATACTGAGGCAGGCTaGGGAGCAAGCCTTGGTAGA +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYYTEAG*GASLGR
Trigger: TCTACCAAGGCTTGCTCCCCAGCCTGCCTCAGTATA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCATTTTGGCTTTTGAGGTaGGTGCTGCAGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPFWLLR*VLQPTG
Trigger: TCCTGTTGGCTGCAGCACCCACCTCAAAAGCCAAAA...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTCTGCAACACTGTGGTaGGCATCTCCTCAGGCAAGA +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYSATLW*ASPQAR
Trigger: TCTTGCCTGAGGAGATGCCCACCACAGTGTTGCAGA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATATGCTCTGCAACACTGTaGTGGGCATCTCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDICSATL*WASPQA
Trigger: TGCCTGAGGAGATGCCCACCACAGTGTTGCAGAGCA...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTTCCTCCAGCAAAATTaGTTACTGTCACCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: EHNQDTDFLALALILNSPFLQQN*LLSPAS
Trigger: GGAAGCAGGTGACAGTAACCAATTTTGCTGGAGGAA...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTAGATCCGAAGCAGATTaGTACAAGAAAAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQARSEAD*YKKRGS
Trigger: GGAACCTCTTTTCTTGTATCAATCTGCTTCGGATCT...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCGGGCTGATTGTGAAATaGGCCAAAACCAACCATATC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPGLIVK*AKTNHI
Trigger: GATATGGTTGGTTTTGGCTCATTTCACAATCAGCCC...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATACGAGAGGCATCAGCATaGCCCCTGAAATTCAGATGC +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIREASA*PLKFRC
Trigger: GCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCG...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TCCATCTGTGCCTGGACCTCTGCAATCGACGTGTACTTGTGCTGTTTCAGAGTCTCCTCCTTTGCAAGCTaGCAAAGCAAGGATTTGTAT +
Preference number: 4 (lower is better)
Translates to: SICAWTSAIDVYLCCFRVSSFAS*QSKDLY
Trigger: ATACAAATCCTTGCTTTGTCAGCTTGCAAAGGAGGA...GACTCTGAAACAGCACAAGTACACGTCGATTGCAGAGGTCCAGGCACAGATGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR GCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCAGCAACATAGAGAATTaGTCGAGCCACCTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPSNIEN*SSHLES
Trigger: AGACTCAAGGTGGCTCGAGCAATTCTCTATGTTGCT...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCACCCCCAGCTTCATaGTCTGCAACACTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPPPPAS*SATLWW
Trigger: CCACCACAGTGTTGCAGAGCATGAAGCTGGGGGTGG...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTTAGGATCAAAGGAATaGAGTTGGCAAACACCAGGT +
Preference number: 4 (lower is better)
Translates to: DTDFLALALILNSPPLQALGSKE*SWQTPG
Trigger: ACCTGGTGTTTGCCAACTGCATTCCTTTGATCCTAA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTATTCATCAGGAATTCTaGCCCTTCCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARIIHQEF*PFRVAV
Trigger: TACAGCTACACGGAAGGGCCAGAATTCCTGATGAAT...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCAGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPVLMLS*IGLGSP
Trigger: GGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGAC...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTTTTGGCTTTTGAGGTaGGTGCTGCAGCCAACAGGA +
Preference number: 4 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYFWLLR*VLQPTG
Trigger: TCCTGTTGGCTGCAGCACCCACCTCAAAAGCCAAAA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCGAAGTAAAGGAAGAATaGATCTCAGGCAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFEVKEE*ISGRDD
Trigger: GTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTC...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGACTGCTCAATCAAGTCTaGAGCAGATGCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRLLNQV*SRCWWR
Trigger: TCTCCACCAGCATCTGCTTCAGACTTGATTGAGCAG...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGCTGTTTCAGAGTCTTaGTGCTTTCGTGGATTGGCC +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIAVSES*CFRGLA
Trigger: GGCCAATCCACGAAAGCATCAAGACTCTGAAACAGC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAACGTCCGCTAGGATGTTaGTTGAGTCTGTTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKRPLGC*LSLFWL
Trigger: AAGCCAAAACAGACTCAATCAACATCCTAGCGGACG...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCAGGAGCACTGCAGCAATaGACTAGGACAGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPGALQQ*TRTVPQ
Trigger: CTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCC...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGATTGGTAGAGGGTTTCTaGAGGGACTTGCTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRLVEGF*RDLLNF
Trigger: GAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAA...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTTTAGGATCAAAGGAATaGAGTTGGCAAACACCAGGT +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARILGSKE*SWQTPG
Trigger: ACCTGGTGTTTGCCAACTGCATTCCTTTGATCCTAA...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp GTCCTTGAATGCTTCCACTTTGTCAGCTTGTTCAAGATCCGAAGCAGATTGATAGGGCATCAAGATCATTaGCGTATGCCCAGTCGTCGT +
Preference number: 4 (lower is better)
Translates to: VLECFHFVSLFKIRSRLIGHQDH*RMPSRR
Trigger: ACGACGACTGGGCATACGGCAATGATCTTGATGCCC...TATCAATCTGCTTCGGATCTTGAACAAGCTGACAAAGTGGAAGCATTCAAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp ACACCACCAGCATCATTGTCCTTGAATGCTTCCACTTTGTCAGCTTGTTCAAGATCAAAGGAATGCAGTTaGCAAACACCAGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TPPASLSLNASTLSACSRSKECS*QTPGAG
Trigger: CCCAGCACCTGGTGTTTGCCAACTGCATTCCTTTGA...TCTTGAACAAGCTGACAAAGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCGAAGTAAAGGAAGAATaGATCTCAGGCAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPEVKEE*ISGRDD
Trigger: GTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTC...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTGAAGTAAAGGAAGAATaGATCTCAGGCAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: ALALILNSPPLQADKARIEVKEE*ISGRDD
Trigger: GTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTC...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGACAGCTTTCCCAGCCTTaGGCTGATTGTGAAATGAGC +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRQLSQP*ADCEMS
Trigger: GCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTG...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAACTGTTGCTGTCCACTaGACAAAGGTGACACAGGCA +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRTVAVH*TKVTQA
Trigger: TGCCTGTGTCACCTTTGTCCAGTGGACAGCAACAGT...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAGGGCTGATTGTGAAATaGGCCAAAACCAACCATATC +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRGLIVK*AKTNHI
Trigger: GATATGGTTGGTTTTGGCTCATTTCACAATCAGCCC...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR GCA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAGTTTCTGCAGGGACTTaGTCAACTTCTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIVSAGT*STSSSP
Trigger: GGGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAAC...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACATTCATCAGGAATTCTaGCCCTTCCGTGTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDIHQEF*PFRVAV
Trigger: TACAGCTACACGGAAGGGCCAGAATTCCTGATGAAT...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CCA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACGAAAAATGGCCCCTCTaGTTAAGGGAAGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDEKWPL*LREASL
Trigger: AAGAGAAGCTTCCCTTAACCAGAGGGGCCATTTTTC...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR TCA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAAGATCCGAAGCAGATTaGTACAAGAAAAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRRSEAD*YKKRGS
Trigger: GGAACCTCTTTTCTTGTATCAATCTGCTTCGGATCT...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAGACCACTGCAAAATTTaGTCACCATCCCAAACAGCA +
Preference number: 4 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRDHCKI*SPSQTA
Trigger: TGCTGTTTGGGATGGTGACCAAATTTTGCAGTGGTC...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCAGCAAACACCAGGTGCTaGGCCATGTATTCAAACTGG +
Preference number: 4 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPANTRC*AMYSNW
Trigger: CCAGTTTGAATACATGGCCCAGCACCTGGTGTTTGC...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR TCA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCAGGGCTGATTGTGAAATaGGCCAAAACCAACCATATC +
Preference number: 4 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPGLIVK*AKTNHI
Trigger: GATATGGTTGGTTTTGGCTCATTTCACAATCAGCCC...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCGGCTGGGGCTGTTTGTaGTTCACGATCAGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSGWGCL*FTISGP
Trigger: GGGCCCACTGATCGTGAACAACAAACAGCCCCAGCC...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CAA 90 bp CTCATTGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTGCCCACGGGAGCCCTTaGGGGCAAGTCAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: LIVVQRGAQLGSEGLPHGAHGSP*GQVSLS
Trigger: TGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGGC...ACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACGCTGGGGAGCAAGCCTaGGTAGAGGGTTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDAGEQA*VEGFCR
Trigger: CCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGC...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAGGCTGGGGCTGTTTGTaGTTCACGATCAGTGGGCCC +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAGWGCL*FTISGP
Trigger: GGGCCCACTGATCGTGAACAACAAACAGCCCCAGCC...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CAA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCAGCTCCACCAAAGCATaGAACGTGCCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCSSTKA*NVPTSR
Trigger: CCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCT...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAGCAAATGGCTCATTGTaGTACAGCGGGGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAANGSL*YSGEPS
Trigger: GCTGGGCTCCCCGCTGTACAACAATGAGCCATTTGC...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCTGCCGCCCCAAGTATTaGGTCTGTACCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GRHSGAVLPPGGGWEHCSCRPKY*VCTLSS
Trigger: GCTGCTCAAGGTACAGACCAAATACTTGGGGCGGCA...GCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGATGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRWVRCW*VSSSVH
Trigger: GTGGACTGAGCTGGATACCAACCAGCACCGGACCCA...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CACTGGCAGGAAGTCAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTGAAATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: HWQEVRVAVGPVIAPGVEMANGS*LYSGEP
Trigger: GGGCTCCCCGCTGTACAACAATGAGCCATTTGCCAT...TTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTGACTTCCTGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGAGCTGGGGAGCAAGCCTaGGTAGAGGGTTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRAGEQA*VEGFCR
Trigger: CCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGC...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGCATCAAGATCATTGCCGTATGCCCAGTCGTCGTTCAGCCGATGCCGCACCTTAGGGAGGTCCACCCGTaGGCCCAGGACACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GIKIIAVCPVVVQPMPHLREVHP*AQDTLQ
Trigger: CTGCAGAGTGTCCTGGGCCAACGGGTGGACCTCCCT...AAGGTGCGGCATCGGCTGAACGACGACTGGGCATACGGCAATGATCTTGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCTTGCGCTGGTTGCGGTaGAACTCGCGGGCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: TPTPEHNQDTDFLALALILRWLR*NSRALP
Trigger: GGGCAAAGCCCGCGAGTTCAACCGCAACCAGCGCAA...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CAA 90 bp TCGTGGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACTGCCTAGAGTGGAGTCTTTGCGCTGGTaGCGGTTGAACTCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: SWIGLGSPTTVFVSLPRVESLRW*RLNSRA
Trigger: AGCCCGCGAGTTCAACCGCAACCAGCGCAAAGACTC...CACTCTAGGCAGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCAAGCTCTGCAGCCCACTaGTCTGTGTCAGCATACTCA +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAASSAAH*SVSAYS
Trigger: TGAGTATGCTGACACAGACAAGTGGGCTGCAGAGCT...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGATTGCTCGAGCCACCTaGAGTCTCTTCTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVIARAT*SLFSLA
Trigger: TGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCAAT...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CTCATTGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTGCAAATGGCTCATTGTaGTACAGCGGGGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LIVVQRGAQLGSEGLPHGANGSL*YSGEPS
Trigger: GCTGGGCTCCCCGCTGTACAACAATGAGCCATTTGC...ACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACGGGCATCAAGATCATaGCCGTATGCCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRRASRS*PYAQSS
Trigger: CGACGACTGGGCATACGGCAATGATCTTGATGCCCG...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATTGAAGCGTTCAATGTaGGCACGAAGGGCACACTCC +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAALKRSM*ARRAHS
Trigger: GGAGTGTGCCCTTCGTGCCAACATTGAACGCTTCAA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTCCCAGGAAATGGGCTaGGAGAAGACCTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDSQEMG*EKTSLS
Trigger: AGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGA...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTCCTCCACTCAGCCTAAACTCTCCTCCTTaGCAAGCTGACAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: QRGAQLGSEGLPHGPPLSLNSPP*QADKAR
Trigger: CCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAG...GCTGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTTTGCGCTGGTTGCGGTaGAACTCGCGGGCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVLRWLR*NSRALP
Trigger: GGGCAAAGCCCGCGAGTTCAACCGCAACCAGCGCAA...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CAA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCCACAGCAACTCCATCTaGAACAGGGGCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCHSNSI*NRGWVK
Trigger: TTTTACCCAGCCCCTGTTCAAGATGGAGTTGCTGTG...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369796.5
CDS-3UTR CAA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGAGCTCAGTCCACTTCTaGTCTGTCACATGGATCCGG +
Preference number: 5 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVSSVHF*SVTWIR
Trigger: CCGGATCCATGTGACAGACAAGAAGTGGACTGAGCT...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCGCAAATGGCTCATTGTaGTACAGCGGGGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: TPTPEHNQDTDFLALALIANGSL*YSGEPS
Trigger: GCTGGGCTCCCCGCTGTACAACAATGAGCCATTTGC...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGTGCTTTATCAGAGCCTaGTGCTCTCGGCGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQCFIRA*CSRRPR
Trigger: ACGGGGCCGCCGAGAGCACAAGGCTCTGATAAAGCA...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGTCTTTCTCTCTGACCTaGGGAGCCCACGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQSFSLT*GAHGSP
Trigger: AGGGCTCCCGTGGGCTCCCAAGGTCAGAGAGAAAGA...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGTCTTTCTCTCTGACCTaGGGAGCCCACGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGSFSLT*GAHGSP
Trigger: AGGGCTCCCGTGGGCTCCCAAGGTCAGAGAGAAAGA...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGGGGGCTGGGGCTGTTaGTTGTTCACGATCAGTGGG +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVGGWGC*LFTISG
Trigger: CCCACTGATCGTGAACAACAAACAGCCCCAGCCCCC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CAA 90 bp AGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTGAACTCGCGGGCTTaGCCCCCAGGCAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RAQPRYRLSGPGPNPKLSLNSRA*PPGRRP
Trigger: GGGCCTCCTGCCTGGGGGCAAAGCCCGCGAGTTCAA...GGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS TCA 90 bp CTTTCTGGAGACAGGGTCTGGCCGGCGCCCTGTGGTATATCACACTaGCGAGCAAGTAATGTCAAGCACAGCTGGCACCAGGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: LSGDRVWPAPCGISH*RASNVKHSWHQANS
Trigger: GCTGTTGGCCTGGTGCCAGCTGTGCTTGACATTACTTGCTCGTCAGTGTGATATACCACAGGGCGCCGGCCAGACCCTGTCTCCAGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 90 bp TCAGCCTTCATGCTCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACTaGATCACAGACAGGGAAGCAGAGCCAGGGTCAATGTGTCCACAG +
Preference number: 5 (lower is better)
Translates to: SAFMLCSSSKPPSVH*ITDREAEPGSMCPQ
Trigger: CTGTGGACACATTGACCCTGGCTCTGCTTCCCTGTCTGTGATGCAGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS GCA 90 bp GCTTCTCAGCCTTCATGCTCTGCAGCTCCTCAAAGCCGCCTAGCGTaGACTGCATCACAGACAGGGAAGCAGAGCCAGGGTCAATGTGTC +
Preference number: 5 (lower is better)
Translates to: ASQPSCSAAPQSRLA*TASQTGKQSQGQCV
Trigger: GACACATTGACCCTGGCTCTGCTTCCCTGTCTGTGATGCAGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS CCA 90 bp CTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACTTCTTGTCTGTCACTGCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: LPSHPGASWHGSGAG*YPAQSTSCLSLQGK
Trigger: CTTGCCCTGCAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CCA 90 bp GTGACTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTaGTTGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: VTSKPSRSLMAWVRC*LVSSSVHFLSVTAG
Trigger: CCCTGCAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS-3UTR CAA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCATTGCTCGAGCCACCTaGAGTCTCTTCTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: TPTPEHNQDTDFLALALIIARAT*SLFSLA
Trigger: TGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCAAT...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTAGCTCCACCAAAGCATaGAACGTGCCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVSSTKA*NVPTSR
Trigger: CCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCT...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCATGTTGCGAATCACTTaGATGCTGTCCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCMLRIT*MLSSGS
Trigger: GCTTCCTGAGGACAGCATCAAAGTGATTCGCAACAT...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CACTGGCAGGAAGTCAGGGTTGCTGTGGGCCCGGTCATAGCGCCGGGCGTTGAAATGTTGCGAATCACTTaGATGCTGTCCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: HWQEVRVAVGPVIAPGVEMLRIT*MLSSGS
Trigger: GCTTCCTGAGGACAGCATCAAAGTGATTCGCAACAT...TTCAACGCCCGGCGCTATGACCGGGCCCACAGCAACCCTGACTTCCTGCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp TCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACAATACTGTCTTCCAGAGCAGCATGCTTTATCAGAGCCTaGTGCTCTCGGCGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: SAAPQSRLACTILSSRAACFIRA*CSRRPR
Trigger: ACGGGGCCGCCGAGAGCACAAGGCTCTGATAAAGCA...TGCTGCTCTGGAAGACAGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGTCCCCCTCCAGACTGTaGTCATCATCATTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVSPSRL*SSSFSS
Trigger: AGAGGAGAATGATGATGACAACAGTCTGGAGGGGGA...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCGCCCACGGGAGCCCTTaGGGGCAAGTCAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIAHGSP*GQVSLS
Trigger: TGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGGC...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCGTTCCTCCAGCAAAATaGGTTACTGTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCVPPAK*VTVTCF
Trigger: GAAGCAGGTGACAGTAACCAATTTTGCTGGAGGAAC...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GACCCTGGGAACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACACACCACCAGCATCATaGTCCTTGAATGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: DPGNQGEVKLGSPKPRTDTPPAS*SLNAST
Trigger: AGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT...GTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTTCCCAGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCAGGGAGGTCCACCCGTaGGCCCAGGACACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIREVHP*AQDTLQ
Trigger: CTGCAGAGTGTCCTGGGCCAACGGGTGGACCTCCCT...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCACTAAACTCTCCTCCTTaGCAAGCTGACAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAALNSPP*QADKAR
Trigger: CCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAG...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCCTAAACTCTCCTCCTTaGCAAGCTGACAAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCLNSPP*QADKAR
Trigger: CCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAG...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS GCA 90 bp GCAGTGACTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTaGTGGTTGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACATGG +
Preference number: 5 (lower is better)
Translates to: AVTSKPSRSLMAWVR*WLVSSSVHFLSVTW
Trigger: CCATGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS GCA 90 bp CTCCAGGAGGAGAAAGATGTTGTAGCGCATCCAGGACTGCACCTCTaGCTCCGAGCTGCACTCCCCAAACGTGCCTTGAGCAACATAGAG +
Preference number: 5 (lower is better)
Translates to: LQEEKDVVAHPGLHL*LRAALPKRALSNIE
Trigger: CTCTATGTTGCTCAAGGCACGTTTGGGGAGTGCAGCTCGGAGGCAGAGGTGCAGTCCTGGATGCGCTACAACATCTTTCTCCTCCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS GCA 90 bp GCAGTGACTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTaGTGGTTGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: AVTSKPSRSLMAWVR*WLVSSSVHFLSVTA
Trigger: TGCAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGTCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CCA 90 bp CTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACTTCTTGTCTGTCACATGGATCCGGA +
Preference number: 5 (lower is better)
Translates to: LPSHPGASWHGSGAG*YPAQSTSCLSHGSG
Trigger: TCCGGATCCATGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CCA 90 bp TTCTCCCTGGCAGTGACTTCCAAGCCATCCAGGAGCCTCATGGCATaGGTCCGGTGCTGGTTGGTATCCAGCTCAGTCCACTTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: FSLAVTSKPSRSLMA*VRCWLVSSSVHFLS
Trigger: AGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGTCACTGCCAGGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS CCA 90 bp GCTCACCCAAAGCCACTCACCTGTTTCAGAGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: AHPKPLTCFRVLMLS*IGLGSPTTVFVSLP
Trigger: AGGCAGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGGTGAGTGGCTTTGGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS-3UTR CAA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCAGCTCTGCAGCCCACTaGTCTGTGTCAGCATACTCA +
Preference number: 5 (lower is better)
Translates to: TPTPEHNQDTDFLALALISSAAH*SVSAYS
Trigger: TGAGTATGCTGACACAGACAAGTGGGCTGCAGAGCT...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGTCACCTGCTTCCAAACTCTCCGCCGTCAGCTCTGGCAGCTCATGCACCACGCTCCCCCTCCAGACTGTaGTCATCATCATTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CHLLPNSPPSALAAHAPRSPSRL*SSSFSS
Trigger: AGAGGAGAATGATGATGACAACAGTCTGGAGGGGGA...GCGTGGTGCATGAGCTGCCAGAGCTGACGGCGGAGAGTTTGGAAGCAGGTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATTAACAATGACCTCTTaGTGGCGGTTTACATCCACC +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAALTMTS*WRFTST
Trigger: GGTGGATGTAAACCGCCACAAAGAGGTCATTGTTAA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAAGACACAGTGGGGCTGTGCTGCCACCTGGTGGGGGATGGGAGCACTGCAGCATTCCACTTTGTCAGCTaGTTCAAGATCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: EDTVGLCCHLVGDGSTAAFHFVS*FKIRSR
Trigger: TCTGCTTCGGATCTTGAACAAGCTGACAAAGTGGAA...TGCTGCAGTGCTCCCATCCCCCACCAGGTGGCAGCACAGCCCCACTGTGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCCCAGCATCATTGTCCTaGAATGCTTCCACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SWAHPSPGQTAEDTVGLCPASLS*NASTLS
Trigger: TGACAAAGTGGAAGCATTCAAGGACAATGATGCTGG...GCACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGAAAGATGGGGGCTGACTaGAACACCACCAGCATCATT +
Preference number: 5 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRKMGAD*NTTSII
Trigger: AATGATGCTGGTGGTGTTCAAGTCAGCCCCCATCTT...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGACACTCTGCAGGCAGTaGTCCACTGGCAGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQTLCRQ*STGRKS
Trigger: TGACTTCCTGCCAGTGGACAACTGCCTGCAGAGTGT...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GCTGCGGCTGGACTCAAGGAACATCTCAATGTCTTTCTCTCTGACCTTGGGAGCGGGGGCTGGGGCTGTTaGTTGTTCACGATCAGTGGG +
Preference number: 5 (lower is better)
Translates to: AAAGLKEHLNVFLSDLGSGGWGC*LFTISG
Trigger: CCCACTGATCGTGAACAACAAACAGCCCCAGCCCCC...GCTCCCAAGGTCAGAGAGAAAGACATTGAGATGTTCCTTGAGTCCAGCCGCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS TCA 90 bp CATGATGGCAAATGGCTCATTGTTGTACAGCGGGGAGCCTGGAGGTaGCACAAAGGTATCAGGACCCTCCCAAAGCCTTCCGCCTCAGCT +
Preference number: 5 (lower is better)
Translates to: HDGKWLIVVQRGAWR*HKGIRTLPKPSASA
Trigger: AGCTGAGGCGGAAGGCTTTGGGAGGGTCCTGATACCTTTGTGTCACCTCCAGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CCA 90 bp GTGACTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTaGTTGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACATGGATC +
Preference number: 5 (lower is better)
Translates to: VTSKPSRSLMAWVRC*LVSSSVHFLSVTWI
Trigger: GATCCATGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CCA 90 bp GGGGGAGGAGATAGCTCAGGGCAACTAATTTATGCCAAACCTTTCTaGAGACAGGGTCTGGCCGGCGCCCTGTGGTATATCACACTGACG +
Preference number: 5 (lower is better)
Translates to: GGGDSSGQLIYAKPF*RQGLAGALWYITLT
Trigger: CGTCAGTGTGATATACCACAGGGCGCCGGCCAGACCCTGTCTCCAGAAAGGTTTGGCATAAATTAGTTGCCCTGAGCTATCTCCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS-3UTR CAA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGAGCTCAGTCCACTTCTaGTCTGTCACATGGATCCGG +
Preference number: 5 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQSSVHF*SVTWIR
Trigger: CCGGATCCATGTGACAGACAAGAAGTGGACTGAGCT...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACGAGGCTGCTCTCATGTaGCGAATCACTTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNEAALM*RITLML
Trigger: CAGCATCAAAGTGATTCGCAACATGAGAGCAGCCTC...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTTGCTTTATCAGAGCCTaGTGCTCTCGGCGGCCCCGT +
Preference number: 5 (lower is better)
Translates to: DTDFLALALILNSPPLQACFIRA*CSRRPR
Trigger: ACGGGGCCGCCGAGAGCACAAGGCTCTGATAAAGCA...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTTCTTTCTCTCTGACCTaGGGAGCCCACGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: EHNQDTDFLALALILNSPSFSLT*GAHGSP
Trigger: AGGGCTCCCGTGGGCTCCCAAGGTCAGAGAGAAAGA...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CTCATTGTTGTACAGCGGGGAGCCCAGCTCGGCTCTGAAGGTCTGCCGCATGGTGTTCCTCCAGCAAAATaGGTTACTGTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: LIVVQRGAQLGSEGLPHGVPPAK*VTVTCF
Trigger: GAAGCAGGTGACAGTAACCAATTTTGCTGGAGGAAC...ACCATGCGGCAGACCTTCAGAGCCGAGCTGGGCTCCCCGCTGTACAACAATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp AAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGACACAGTGGGGCTGTGCCAGCATCATTGTCCTaGAATGCTTCCACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: KLGSPKPRTDCGRHSGAVPASLS*NASTLS
Trigger: TGACAAAGTGGAAGCATTCAAGGACAATGATGCTGG...CACAGCCCCACTGTGTCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACAAGATGGGGGCTGACTaGAACACCACCAGCATCATT +
Preference number: 5 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNKMGAD*NTTSII
Trigger: AATGATGCTGGTGGTGTTCAAGTCAGCCCCCATCTT...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGTGCTGCAGCCAACAGGATCTTCAGGAGGGCAATCATATACTGAGGCAGGCGACATGGTCTTCATGTaGCTCTTTCGCCACTGCCGC +
Preference number: 5 (lower is better)
Translates to: WVLQPTGSSGGQSYTEAGDMVFM*LFRHCR
Trigger: GCGGCAGTGGCGAAAGAGCAACATGAAGACCATGTC...GCCTGCCTCAGTATATGATTGCCCTCCTGAAGATCCTGTTGGCTGCAGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGTTGAAGCGTTCAATGTaGGCACGAAGGGCACACTCC +
Preference number: 5 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGLKRSM*ARRAHS
Trigger: GGAGTGTGCCCTTCGTGCCAACATTGAACGCTTCAA...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAATTGAACTCGCGGGCTTaGCCCCCAGGCAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKLNSRA*PPGRRP
Trigger: GGGCCTCCTGCCTGGGGGCAAAGCCCGCGAGTTCAA...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS TCA 90 bp ACAAGCCAAAAGCTCACCCAAAGCCACTCACCTGTTTCAGAGTCTTaGTGCTTTCGTGGATTGGCCTGGGCAGCCCCACCACTGTGTTCG +
Preference number: 5 (lower is better)
Translates to: TSQKLTQSHSPVSES*CFRGLAWAAPPLCS
Trigger: CGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGGTGAGTGGCTTTGGGTGAGCTTTTGGCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS GCA 90 bp GCCCATATGTCAGTCTTGTGCCTGGCCTCCTGCCAAGGCGGAAACTaGAGGGCGAACACAGCAGTGTTCTATTTCCATGTTCAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: AHMSVLCLASCQGGN*RANTAVFYFHVQKL
Trigger: GAGCTTCTGAACATGGAAATAGAACACTGCTGTGTTCGCCCTGCAGTTTCCGCCTTGGCAGGAGGCCAGGCACAAGACTGACATATGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS CCA 90 bp CGGCCCTTGGGACCTTGCCCTCTTTCCTCCAGGGATGAAAGGCCTTaGCTGAAGGGCCATGTCTTAGAACATTCATGCAGAGTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: RPLGPCPLSSRDERP*LKGHVLEHSCRVQV
Trigger: CACTTGAACTCTGCATGAATGTTCTAAGACATGGCCCTTCAGCCAAGGCCTTTCATCCCTGGAGGAAAGAGGGCAAGGTCCCAAGGGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS-3UTR CAA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCTGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPWVRCW*VSSSVH
Trigger: GTGGACTGAGCTGGATACCAACCAGCACCGGACCCA...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGCTCCCCAAACGTGCCTaGAGCAACATAGAGAATTGC +
Preference number: 5 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGLPKRA*SNIENC
Trigger: GCAATTCTCTATGTTGCTCAAGGCACGTTTGGGGAG...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTAGCTCCACCAAAGCATaGAACGTGCCCACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: EHNQDTDFLALALILNSPSSTKA*NVPTSR
Trigger: CCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCT...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTGAGGCTGCTCTCATGTaGCGAATCACTTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVEAALM*RITLML
Trigger: CAGCATCAAAGTGATTCGCAACATGAGAGCAGCCTC...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTTCCCCCTCCAGACTGTaGTCATCATCATTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVSPSRL*SSSFSS
Trigger: AGAGGAGAATGATGATGACAACAGTCTGGAGGGGGA...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGGGTTTCTGCAGGGACTaGCTCAACTTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQGFCRD*LNFFFS
Trigger: GGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACC...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AACCAAGGGGAGGTCAAGCTGGGCTCACCCAAGCCCAGGACAGACTGCGGAAGATTGATTGAGTCTGTTTaGGCTTTTGAGGTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: NQGEVKLGSPKPRTDCGRLIESV*AFEVGA
Trigger: AGCACCCACCTCAAAAGCCAAAACAGACTCAATCAA...TCTTCCGCAGTCTGTCCTGGGCTTGGGTGAGCCCAGCTTGACCTCCCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTAAGATGGGGGCTGACTaGAACACCACCAGCATCATT +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVKMGAD*NTTSII
Trigger: AATGATGCTGGTGGTGTTCAAGTCAGCCCCCATCTT...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTCGGGCATCAAGATCATaGCCGTATGCCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: DTDFLALALILNSPPLQARASRS*PYAQSS
Trigger: CGACGACTGGGCATACGGCAATGATCTTGATGCCCG...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAAAGGGAGGTCCACCCGTaGGCCCAGGACACTCTGCAG +
Preference number: 5 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKREVHP*AQDTLQ
Trigger: CTGCAGAGTGTCCTGGGCCAACGGGTGGACCTCCCT...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CCA 90 bp CATCACAGACAGGGAAGCAGAGCCAGGGTCAATGTGTCCACAGGCTaGCCCCTGACCATTGTGTCAGGCTCAGAAACATTCATGACATCA +
Preference number: 5 (lower is better)
Translates to: HHRQGSRARVNVSTG*PLTIVSGSETFMTS
Trigger: TGATGTCATGAATGTTTCTGAGCCTGACACAATGGTCAGGGGCCAGCCTGTGGACACATTGACCCTGGCTCTGCTTCCCTGTCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCATTGCTCGAGCCACCTaGAGTCTCTTCTCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFIARAT*SLFSLA
Trigger: TGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCAAT...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGTGCTGCAGCCAACAGGATCTTCAGGAGGGCAATCATATACTGAGGCAGGCCTCCCCAAACGTGCCTaGAGCAACATAGAGAATTGC +
Preference number: 5 (lower is better)
Translates to: WVLQPTGSSGGQSYTEAGLPKRA*SNIENC
Trigger: GCAATTCTCTATGTTGCTCAAGGCACGTTTGGGGAG...GCCTGCCTCAGTATATGATTGCCCTCCTGAAGATCCTGTTGGCTGCAGCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp TCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACAATACTGTCTTCCAGAGCAGCAATCAGGTACATGATGTaGAGCAGGACCCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: SAAPQSRLACTILSSRAAIRYMM*SRTLRS
Trigger: AGACCTCAGGGTCCTGCTCAACATCATGTACCTGAT...TGCTGCTCTGGAAGACAGTATTGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: EHNQDTDFLALALILNSPMANGS*LYSGEP
Trigger: GGGCTCCCCGCTGTACAACAATGAGCCATTTGCCAT...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIMANGS*LYSGEP
Trigger: GGGCTCCCCGCTGTACAACAATGAGCCATTTGCCAT...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTATGTTGCGAATCACTTaGATGCTGTCCTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVMLRIT*MLSSGS
Trigger: GCTTCCTGAGGACAGCATCAAAGTGATTCGCAACAT...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AATGGATCTCAGGCAGAGATGACTGCTTCGGAGCAGGACCCTGGGAACCAAGGGTTGAAGGCATCTAGGTaGTCCTGCTTTATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: NGSQAEMTASEQDPGNQGLKASR*SCFIRA
Trigger: GGCTCTGATAAAGCAGGACAACCTAGATGCCTTCAA...CCCTTGGTTCCCAGGGTCCTGCTCCGAAGCAGTCATCTCTGCCTGAGATCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAGCCCACGGGAGCCCTTaGGGGCAAGTCAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRAHGSP*GQVSLS
Trigger: TGACAGGCTGACTTGCCCCAAAGGGCTCCCGTGGGC...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp ACCCCCACCCCAGAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCTTGATTGAGTCTGTTTaGGCTTTTGAGGTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: TPTPEHNQDTDFLALALILIESV*AFEVGA
Trigger: AGCACCCACCTCAAAAGCCAAAACAGACTCAATCAA...GATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTCTGGGGTGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTGATTGAGTCTGTTTaGGCTTTTGAGGTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNLIESV*AFEVGA
Trigger: AGCACCCACCTCAAAAGCCAAAACAGACTCAATCAA...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTACGTCCGCTAGGATGTaGATTGAGTCTGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVTSARM*IESVLA
Trigger: AGCCAAAACAGACTCAATCAACATCCTAGCGGACGT...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGCAGGCTGGGGAGCAAGCCTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTAACAATGACCTCTTaGTGGCGGTTTACATCCACC +
Preference number: 5 (lower is better)
Translates to: RQAGEQALVEGFCRDLLNLTMTS*WRFTST
Trigger: GGTGGATGTAAACCGCCACAAAGAGGTCATTGTTAA...GTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCGACATGGTCTTCATGTaGCTCTTTCGCCACTGCCGC +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFDMVFM*LFRHCR
Trigger: GCGGCAGTGGCGAAAGAGCAACATGAAGACCATGTC...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCACACTCTGCAGGCAGTaGTCCACTGGCAGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFTLCRQ*STGRKS
Trigger: TGACTTCCTGCCAGTGGACAACTGCCTGCAGAGTGT...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS GCA 90 bp ACTGGCGAAAAGGGATGTCTCTATACCTGGCACAGGTTCAGCTGTTaGTGGCAAGCTGTCTACAAACTAACCCTCCTCATCCTGGGTGTC +
Preference number: 5 (lower is better)
Translates to: TGEKGCLYTWHRFSC*WQAVYKLTLLILGV
Trigger: GACACCCAGGATGAGGAGGGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTTTTCGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS CCA 90 bp GATCCGGAAGTCCTCCTCAAAGCATTTTCGATTCATCAGGAATTCTaGCCCTTCCGTGTAGCTGTAAAGCTCCGAGAGCTCTGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: DPEVLLKAFSIHQEF*PFRVAVKLRELCSP
Trigger: TGGGCTGCAGAGCTCTCGGAGCTTTACAGCTACACGGAAGGGCCAGAATTCCTGATGAATCGAAAATGCTTTGAGGAGGACTTCCGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CCA 90 bp GGCGAAAAGGGATGTCTCTATACCTGGCACAGGTTCAGCTGTTGCTaGCAAGCTGTCTACAAACTAACCCTCCTCATCCTGGGTGTCTCA +
Preference number: 5 (lower is better)
Translates to: GEKGCLYTWHRFSCC*QAVYKLTLLILGVS
Trigger: TGAGACACCCAGGATGAGGAGGGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTTTTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS-3UTR CAA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATGCTGGGGAGCAAGCCTaGGTAGAGGGTTTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYAGEQA*VEGFCR
Trigger: CCTGCAGAAACCCTCTACCAAGGCTTGCTCCCCAGC...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCTTGAAGCGTTCAATGTaGGCACGAAGGGCACACTCC +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFLKRSM*ARRAHS
Trigger: GGAGTGTGCCCTTCGTGCCAACATTGAACGCTTCAA...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCTCCCAGGAAATGGGCTaGGAGAAGACCTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFSQEMG*EKTSLS
Trigger: AGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGA...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAAGAGTCTTTGCGCTGGTaGCGGTTGAACTCGCGGGCT +
Preference number: 5 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKESLRW*RLNSRA
Trigger: AGCCCGCGAGTTCAACCGCAACCAGCGCAAAGACTC...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCAAGGCCAGGCACTGGTaGAGCCCATATGTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFKARHW*SPYVSL
Trigger: AAGACTGACATATGGGCTCAACCAGTGCCTGGCCTT...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS TCA 90 bp CGGCACTGTTGTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGAGGAGAAAGATGTTGTAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: RHCCLFPCSEAPPKH*TCPPPGGERCCSAS
Trigger: GGATGCGCTACAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGACAACAGTGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000369796.5
CDS TCA 90 bp GAGAACAAAAACAGGGTTTATGATGAGGAAATGGAAAGCAGGAGCTaGGAGGTGACGCCCAGGGATCCTAACACCCGGGAGGCAACACTA +
Preference number: 5 (lower is better)
Translates to: ENKNRVYDEEMESRS*EVTPRDPNTREATL
Trigger: TAGTGTTGCCTCCCGGGTGTTAGGATCCCTGGGCGTCACCTCTCAGCTCCTGCTTTCCATTTCCTCATCATAAACCCTGTTTTTGTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 90 bp CCGGTGCTGGTTGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACTaGAGGGCAAGAAACCAGTTACACCTGAGCCTAGAAAAATCCTCA +
Preference number: 5 (lower is better)
Translates to: PVLVGIQLSPLLVCH*RARNQLHLSLEKSS
Trigger: TGAGGATTTTTCTAGGCTCAGGTGTAACTGGTTTCTTGCCCTGCAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CCA 90 bp CATTCTGCGTGCCCAATCACTGGCGAAAAGGGATGTCTCTATACCTaGCACAGGTTCAGCTGTTGCTGGCAAGCTGTCTACAAACTAACC +
Preference number: 5 (lower is better)
Translates to: HSACPITGEKGCLYT*HRFSCCWQAVYKLT
Trigger: GGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTTTTCGCCAGTGATTGGGCACGCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS-3UTR CAA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATATGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCAC +
Preference number: 5 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDIWVRCW*VSSSVH
Trigger: GTGGACTGAGCTGGATACCAACCAGCACCGGACCCA...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AGGAGGGTGGGGGAAGTAAAGGAAGAATGGATCTCAGGCAGAGATGACTGCTTCATCAGGTACATGATGTaGAGCAGGACCCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: RRVGEVKEEWISGRDDCFIRYMM*SRTLRS
Trigger: AGACCTCAGGGTCCTGCTCAACATCATGTACCTGAT...GAAGCAGTCATCTCTGCCTGAGATCCATTCTTCCTTTACTTCCCCCACCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTATCAGGTACATGATGTaGAGCAGGACCCTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: DTDFLALALILNSPPLQAIRYMM*SRTLRS
Trigger: AGACCTCAGGGTCCTGCTCAACATCATGTACCTGAT...AGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GAGCACAACCAAGATACCGACTTTCTGGCCCTGGCCCTAATCCTAAACTCTCCTGGTTTCTGCAGGGACTaGCTCAACTTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EHNQDTDFLALALILNSPGFCRD*LNFFFS
Trigger: GGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACC...AGGAGAGTTTAGGATTAGGGCCAGGGCCAGAAAGTCGGTATCTTGGTTGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GGGGGATGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGTTGAATGCTTCCACTTaGTCAGCTTGTTCAAGATCC +
Preference number: 5 (lower is better)
Translates to: GGWEHCSNELGQSHRYLQLNAST*SACSRS
Trigger: GGATCTTGAACAAGCTGACAAAGTGGAAGCATTCAA...CTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCATCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCATGCCGCCCCAAGTATTaGGTCTGTACCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPCRPKY*VCTLSS
Trigger: GCTGCTCAAGGTACAGACCAAATACTTGGGGCGGCA...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGACGGGCATCAAGATCATaGCCGTATGCCCAGTCGTCG +
Preference number: 5 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRRASRS*PYAQSS
Trigger: CGACGACTGGGCATACGGCAATGATCTTGATGCCCG...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTTGCGAATCTCCCAGGAAATGGGCTaGGAGAAGACCTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SIKSEADAGGEAALMLRISQEMG*EKTSLS
Trigger: AGAAAGGGAGGTCTTCTCCAAGCCCATTTCCTGGGA...GATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS TCA 90 bp CACAGCAGTGTTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGAGGAGAAAGATGTTGTAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: HSSVLFPCSEAPPKH*TCPPPGGERCCSAS
Trigger: GGATGCGCTACAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGAACACTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS CCA 90 bp ATCATGACCCATGTCTTTATAGAGACCCAGGCAACTCCTGAACAATaGACTGAAGCCACTCCCAAGGAGAATTCCGTGACATCCGCAAGG +
Preference number: 5 (lower is better)
Translates to: IMTHVFIETQATPEQ*TEATPKENSVTSAR
Trigger: CCTTGCGGATGTCACGGAATTCTCCTTGGGAGTGGCTTCAGTCCATTGTTCAGGAGTTGCCTGGGTCTCTATAAAGACATGGGTCATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS-3UTR CAA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAAGCTCTGCAGCCCACTaGTCTGTGTCAGCATACTCA +
Preference number: 5 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPSSAAH*SVSAYS
Trigger: TGAGTATGCTGACACAGACAAGTGGGCTGCAGAGCT...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCGAGGCTGCTCTCATGTaGCGAATCACTTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPEAALM*RITLML
Trigger: CAGCATCAAAGTGATTCGCAACATGAGAGCAGCCTC...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCTTGAAGGCATCTAGGTaGTCCTGCTTTATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: WEHCSNELGQSHRYLQIILKASR*SCFIRA
Trigger: GGCTCTGATAAAGCAGGACAACCTAGATGCCTTCAA...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGGGAGCACTGCAGCAATGAACTAGGACAGTCCCACAGGTACCTTCAGATCATCGCAATCGACGTGTACTaGTGCTGTTTCAGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: WEHCSNELGQSHRYLQIIAIDVY*CCFRVL
Trigger: CAAGACTCTGAAACAGCACAAGTACACGTCGATTGC...GATGATCTGAAGGTACCTGTGGGACTGTCCTAGTTCATTGCTGCAGTGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTCTTCTTCTCCCCCTGAGAGCAATCGACGTGTACTaGTGCTGTTTCAGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: LGRGFLQGLAQLLLLPLRAIDVY*CCFRVL
Trigger: CAAGACTCTGAAACAGCACAAGTACACGTCGATTGC...TCTCAGGGGGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GTCTCGAGAGGCATCAGCATGACCCCTGAAATTCAGATGCACGGCGGAGGGGTTAAGATCCGAAGCAGATaGATACAAGAAAAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: VSRGISMTPEIQMHGGGVKIRSR*IQEKRF
Trigger: GAACCTCTTTTCTTGTATCAATCTGCTTCGGATCTT...AACCCCTCCGCCGTGCATCTGAATTTCAGGGGTCATGCTGATGCCTCTCGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp CTTGGTAGAGGGTTTCTGCAGGGACTTGCTCAACTTCTTCTTCTCCCCCTGAGAACACCACCAGCATCATaGTCCTTGAATGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: LGRGFLQGLAQLLLLPLRTPPAS*SLNAST
Trigger: AGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT...TCTCAGGGGGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACCCTCTACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAATGCCGCCCCAAGTATTaGGTCTGTACCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKCRPKY*VCTLSS
Trigger: GCTGCTCAAGGTACAGACCAAATACTTGGGGCGGCA...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TCAATCAAGTCTGAAGCAGATGCTGGTGGAGAGGCTGCTCTCATGTTGCGAATCTTGAAGGCATCTAGGTaGTCCTGCTTTATCAGAGCC +
Preference number: 5 (lower is better)
Translates to: SIKSEADAGGEAALMLRILKASR*SCFIRA
Trigger: GGCTCTGATAAAGCAGGACAACCTAGATGCCTTCAA...GATTCGCAACATGAGAGCAGCCTCTCCACCAGCATCTGCTTCAGACTTGATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTACGTCCGCTAGGATGTaGATTGAGTCTGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ALALILNSPPLQADKARITSARM*IESVLA
Trigger: AGCCAAAACAGACTCAATCAACATCCTAGCGGACGT...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GCCCTGGCCCTAATCCTAAACTCTCCTCCTTTGCAAGCTGACAAAGCAAGGATTGTTCCTCCAGCAAAATaGGTTACTGTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALALILNSPPLQADKARIVPPAK*VTVTCF
Trigger: GAAGCAGGTGACAGTAACCAATTTTGCTGGAGGAAC...AATCCTTGCTTTGTCAGCTTGCAAAGGAGGAGAGTTTAGGATTAGGGCCAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGTGAAATGAGCCAAAACCAACCATATCCAAGAGAGGAGGGTGGGGGAAGTAAACTCCCCAAACGTGCCTaGAGCAACATAGAGAATTGC +
Preference number: 5 (lower is better)
Translates to: CEMSQNQPYPREEGGGSKLPKRA*SNIENC
Trigger: GCAATTCTCTATGTTGCTCAAGGCACGTTTGGGGAG...TTTACTTCCCCCACCCTCCTCTCTTGGATATGGTTGGTTTTGGCTCATTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCACCCCCAGCAATCGACGTGTACTaGTGCTGTTTCAGAGTCTTG +
Preference number: 5 (lower is better)
Translates to: SGYNVAGGWNNIRNTPPPAIDVY*CCFRVL
Trigger: CAAGACTCTGAAACAGCACAAGTACACGTCGATTGC...TGGGGGTGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATGGTTTCTGCAGGGACTaGCTCAACTTCTTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYGFCRD*LNFFFS
Trigger: GGAGAAGAAGAAGTTGAGCAAGTCCCTGCAGAAACC...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CCA 90 bp TTCTTGCAGGCAGACAACAGTCTTAAAAGGCTTCTCCCTACAGGCTaGTTTCACTCTACTCACTTAGGACCAAACAAGCCAAAAGCTCAC +
Preference number: 5 (lower is better)
Translates to: FLQADNSLKRLLPTG*FHSTHLGPNKPKAH
Trigger: GTGAGCTTTTGGCTTGTTTGGTCCTAAGTGAGTAGAGTGAAACCAGCCTGTAGGGAGAAGCCTTTTAAGACTGTTGTCTGCCTGCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS-3UTR CAA 90 bp TTCCAGCTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATTTCAACTTAAAGTGCTaGAGCAGCAGCAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: FQLSQPWADCEMSQNQPYFNLKC*SSSSRT
Trigger: TGTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAA...ATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACTTCAACTTAAAGTGCTaGAGCAGCAGCAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDFNLKC*SSSSRT
Trigger: TGTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAA...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp CTTTCCCAGCCTTGGGCTGATTGTGAAATGAGCCAAAACCAACCATATCCAAGAACACCACCAGCATCATaGTCCTTGAATGCTTCCACT +
Preference number: 5 (lower is better)
Translates to: LSQPWADCEMSQNQPYPRTPPAS*SLNAST
Trigger: AGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT...TCTTGGATATGGTTGGTTTTGGCTCATTTCACAATCAGCCCAAGGCTGGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp ATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAAACACCCCAACACTCTGCAGGCAGTaGTCCACTGGCAGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: ITSGYNVAGGWNNIRNTPTLCRQ*STGRKS
Trigger: TGACTTCCTGCCAGTGGACAACTGCCTGCAGAGTGT...TGGGGTGTTTCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGAACGTCCGCTAGGATGTaGATTGAGTCTGTTTTGGCT +
Preference number: 5 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRTSARM*IESVLA
Trigger: AGCCAAAACAGACTCAATCAACATCCTAGCGGACGT...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TGCAAGCTGACAAAGCAAGGATTTGTATGTCTCGAGAGGCATCAGCATGACCCCAAGATCCGAAGCAGATaGATACAAGAAAAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: CKLTKQGFVCLERHQHDPKIRSR*IQEKRF
Trigger: GAACCTCTTTTCTTGTATCAATCTGCTTCGGATCTT...GGGGTCATGCTGATGCCTCTCGAGACATACAAATCCTTGCTTTGTCAGCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACCCAGCATCATTGTCCTaGAATGCTTCCACTTTGTCA +
Preference number: 5 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDPASLS*NASTLS
Trigger: TGACAAAGTGGAAGCATTCAAGGACAATGATGCTGG...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGATTAACAATGACCTCTTaGTGGCGGTTTACATCCACC +
Preference number: 5 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRLTMTS*WRFTST
Trigger: GGTGGATGTAAACCGCCACAAAGAGGTCATTGTTAA...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp TCCTCAGGCAAGACGTCCGCTAGGATGTTGATTGAGTCTGTTTTGGCTTTTGAGAAGATCCGAAGCAGATaGATACAAGAAAAGAGGTTC +
Preference number: 5 (lower is better)
Translates to: SSGKTSARMLIESVLAFEKIRSR*IQEKRF
Trigger: GAACCTCTTTTCTTGTATCAATCTGCTTCGGATCTT...CTCAAAAGCCAAAACAGACTCAATCAACATCCTAGCGGACGTCTTGCCTGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp GCCTCCGCAATTACTTCTGGATATAATGTAGCAGGAGGCTGGAATAACATCAGATTCCACTTTGTCAGCTaGTTCAAGATCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: ASAITSGYNVAGGWNNIRFHFVS*FKIRSR
Trigger: TCTGCTTCGGATCTTGAACAAGCTGACAAAGTGGAA...TCTGATGTTATTCCAGCCTCCTGCTACATTATATCCAGAAGTAATTGCGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp ACACCACCAGCATCATTGTCCTTGAATGCTTCCACTTTGTCAGCTTGTTCAAGATTCCACTTTGTCAGCTaGTTCAAGATCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: TPPASLSLNASTLSACSRFHFVS*FKIRSR
Trigger: TCTGCTTCGGATCTTGAACAAGCTGACAAAGTGGAA...TCTTGAACAAGCTGACAAAGTGGAAGCATTCAAGGACAATGATGCTGGTGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS-3UTR CAA 90 bp TTCAAACTGGTAGACATGGTTCAACTTAAAGTGCTTGAGCAGCAGCAGCAGGACTTGAATGCTTCCACTTaGTCAGCTTGTTCAAGATCC +
Preference number: 5 (lower is better)
Translates to: FKLVDMVQLKVLEQQQQDLNAST*SACSRS
Trigger: GGATCTTGAACAAGCTGACAAAGTGGAAGCATTCAA...GTCCTGCTGCTGCTGCTCAAGCACTTTAAGTTGAACCATGTCTACCAGTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS TCA 90 bp CCCTGTTGGAAGGAAATTTTGTGTATGTCAAGCAAATCTCAGATCTaGGGTTACCTCTTTCTCATCGTCCCTATCCCTTCTGGAAATCCA +
Preference number: 5 (lower is better)
Translates to: PCWKEILCMSSKSQI*GYLFLIVPIPSGNP
Trigger: TGGATTTCCAGAAGGGATAGGGACGATGAGAAAGAGGTAACCTCAGATCTGAGATTTGCTTGACATACACAAAATTTCCTTCCAACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS-3UTR CAA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATATTGAATGCTTCCACTTaGTCAGCTTGTTCAAGATCC +
Preference number: 5 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDILNAST*SACSRS
Trigger: GGATCTTGAACAAGCTGACAAAGTGGAAGCATTCAA...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS-3UTR CAA 90 bp AAAATCAAAGTGCTGAGGCAGCTGAAGGAGCCTCCGCAATTACTTCTGGATATAAATAGCCCTGTATTTTaGTCAGAGATGTGTGAACCA +
Preference number: 5 (lower is better)
Translates to: KIKVLRQLKEPPQLLLDINSPVF*SEMCEP
Trigger: TGGTTCACACATCTCTGACAAAAATACAGGGCTATT...TATATCCAGAAGTAATTGCGGAGGCTCCTTCAGCTGCCTCAGCACTTTGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369796.5
CDS TCA 90 bp AAAGTGCTTACACAAAGCAGGGGCTTACTATTAATAAATGGTATCTaGATAAATGAGTATGAACAAGAATGGCCAAAAGCATTTACCACC +
Preference number: 5 (lower is better)
Translates to: KVLTQSRGLLLINGI*INEYEQEWPKAFTT
Trigger: GGTGGTAAATGCTTTTGGCCATTCTTGTTCATACTCATTTATTCAGATACCATTTATTAATAGTAAGCCCCTGCTTTGTGTAAGCACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CAA 72 bp GAGTCTTTGCGCTGGTTGCGGTTGAACTCGCGGGCTTaGCCCCCAGGCAGGAGGCCCGCGGCGGCCCGCGGT +
Preference number: 6 (lower is better)
Translates to: ESLRWLRLNSRA*PPGRRPAAARG
Trigger: ACCGCGGGCCGCCGCGGGCCTCCTGCCTGGGGGCAAAGCCCGCGAGTTCAACCGCAACCAGCGCAAAGACTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000485775.5
ENST00000489059.1
CDS TCA 72 bp CCGAATAGCCCTCTGAGTCTTTGCGCTGGTTGCGGTTaGACTCGCGGGCTTTGCCCCCAGGCAGGAGGCCCG +
Preference number: 6 (lower is better)
Translates to: PNSPLSLCAGCG*TRGLCPQAGGP
Trigger: CGGGCCTCCTGCCTGGGGGCAAAGCCCGCGAGTTCAACCGCAACCAGCGCAAAGACTCAGAGGGCTATTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000485775.5
ENST00000489059.1
CDS TCA 72 bp AATGCTGCAGAGGGGAGAGGAACCAGATGCCCACCATaGGCAAAGGCCCAGGGCCTGGTGGAGCAGCCGTGC +
Preference number: 6 (lower is better)
Translates to: NAAEGRGTRCPP*AKAQGLVEQPC
Trigger: GCACGGCTGCTCCACCAGGCCCTGGGCCTTTGCTCATGGTGGGCATCTGGTTCCTCTCCCCTCTGCAGCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 72 bp ATCCCCAGGGTCCTACCCAGCTCGGCTCTGAAGGTCTaGCGCATGGTCCTCCACTCAGCCTTGTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: IPRVLPSSALKV*RMVLHSALSPS
Trigger: TGAGGGTGACAAGGCTGAGTGGAGGACCATGCGGCAGACCTTCAGAGCCGAGCTGGGTAGGACCCTGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 72 bp AGGCCCAGGATGCTGCGCTTCTCAGCCTTCATGCTCTaGAGCTCCTCAAAGCCGCCTAGCGTGCACTGCATC +
Preference number: 6 (lower is better)
Translates to: RPRMLRFSAFML*SSSKPPSVHCI
Trigger: GATGCAGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGAGCATGAAGGCTGAGAAGCGCAGCATCCTGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS CCA 72 bp GCAGTGACTTCCAAGCCATCCAGGAGCCTCATGGCATaGGTCCGGTGCTGGTTGGTATCCAGCTCAGTCCAC +
Preference number: 6 (lower is better)
Translates to: AVTSKPSRSLMA*VRCWLVSSSVH
Trigger: GTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGTCACTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS TCA 72 bp GACAGGGTCTGGCCGGCGCCCTGTGGTATATCACACTaGCGAGCAAGTAATGTCAAGCACAGCTGGCACCAG +
Preference number: 6 (lower is better)
Translates to: DRVWPAPCGISH*RASNVKHSWHQ
Trigger: CTGGTGCCAGCTGTGCTTGACATTACTTGCTCGTCAGTGTGATATACCACAGGGCGCCGGCCAGACCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 72 bp GAGAAAGATGTTGTAGCGCATCCAGGACTGCACCTCTaGCTCCGAGCTGCACTCCCCAAACGTGCCTTGAGC +
Preference number: 6 (lower is better)
Translates to: EKDVVAHPGLHL*LRAALPKRALS
Trigger: GCTCAAGGCACGTTTGGGGAGTGCAGCTCGGAGGCAGAGGTGCAGTCCTGGATGCGCTACAACATCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS GCA 72 bp ATGCTCTGCAGCTCCTCAAAGCCGCCTAGCGTGCACTaGATCACAGACAGGGAAGCAGAGCCAGGGTCAATG +
Preference number: 6 (lower is better)
Translates to: MLCSSSKPPSVH*ITDREAEPGSM
Trigger: CATTGACCCTGGCTCTGCTTCCCTGTCTGTGATGCAGTGCACGCTAGGCGGCTTTGAGGAGCTGCAGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS CAA 90 bp ACTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACATGGATCCGG +
Preference number: 6 (lower is better)
Translates to: TSKPSRSLMAWVRCW*VSSSVHFLSVTWIR
Trigger: CCGGATCCATGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CAA 90 bp ACTTCCAAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACTGCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: TSKPSRSLMAWVRCW*VSSSVHFLSVTAGQ
Trigger: TTGCCCTGCAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTTGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS GCA 72 bp TGTAGCGCATCCAGGACTGCACCTCTGCCTCCGAGCTaGACTCCCCAAACGTGCCTTGAGCAACATAGAGAA +
Preference number: 6 (lower is better)
Translates to: CSASRTAPLPPS*TPQTCLEQHRE
Trigger: TTCTCTATGTTGCTCAAGGCACGTTTGGGGAGTGCAGCTCGGAGGCAGAGGTGCAGTCCTGGATGCGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS CCA 72 bp AAGCCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTaGTTGGTATCCAGCTCAGTCCACTTCTTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: KPSRSLMAWVRC*LVSSSVHFLSV
Trigger: GACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS CCA 72 bp CATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACTTCTTGTCTGTCACTG +
Preference number: 6 (lower is better)
Translates to: HPGASWHGSGAG*YPAQSTSCLSL
Trigger: CAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CAA 72 bp CCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACA +
Preference number: 6 (lower is better)
Translates to: PSRSLMAWVRCW*VSSSVHFLSVT
Trigger: TGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CAA 72 bp CCATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTaGGTATCCAGCTCAGTCCACTTCTTGTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: PSRSLMAWVRCW*VSSSVHFLSVT
Trigger: AGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS TCA 72 bp TCTCCTCTTCCCCCAGGATGGGAAAGGCAGGCAGCTTaGCAAGGACAAGCGTTGACCAGCAATGCTAGCAGA +
Preference number: 6 (lower is better)
Translates to: SPLPPGWERQAA*QGQALTSNASR
Trigger: TCTGCTAGCATTGCTGGTCAACGCTTGTCCTTGTCAAGCTGCCTGCCTTTCCCATCCTGGGGGAAGAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS TCA 72 bp AAGCTCACCCAAAGCCACTCACCTGTTTCAGAGTCTTaGTGCTTTCGTGGATTGGCCTGGGCAGCCCCACCA +
Preference number: 6 (lower is better)
Translates to: KLTQSHSPVSES*CFRGLAWAAPP
Trigger: TGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGGTGAGTGGCTTTGGGTGAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS GCA 72 bp TGTCAGCCAGGGAGATGGCAGGCTTCCTCACAGCACTaGTGCAGGCGGCACTGTTGTCTATTTCCATGTTCA +
Preference number: 6 (lower is better)
Translates to: CQPGRWQASSQH*CRRHCCLFPCS
Trigger: TGAACATGGAAATAGACAACAGTGCCGCCTGCAGCAGTGCTGTGAGGAAGCCTGCCATCTCCCTGGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000369796.5
CDS CCA 72 bp CATCCAGGAGCCTCATGGCATGGGTCCGGTGCTGGTTaGTATCCAGCTCAGTCCACTTCTTGTCTGTCACAT +
Preference number: 6 (lower is better)
Translates to: HPGASWHGSGAG*YPAQSTSCLSH
Trigger: ATGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGACCCATGCCATGAGGCTCCTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CCA 72 bp AAGCCACTCACCTGTTTCAGAGTCTTGATGCTTTCGTaGATTGGCCTGGGCAGCCCCACCACTGTGTTCGTG +
Preference number: 6 (lower is better)
Translates to: KPLTCFRVLMLS*IGLGSPTTVFV
Trigger: CACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGGTGAGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS TCA 72 bp AACAGGGTTTATGATGAGGAAATGGAAAGCAGGAGCTaGGAGGTGACGCCCAGGGATCCTAACACCCGGGAG +
Preference number: 6 (lower is better)
Translates to: NRVYDEEMESRS*EVTPRDPNTRE
Trigger: CTCCCGGGTGTTAGGATCCCTGGGCGTCACCTCTCAGCTCCTGCTTTCCATTTCCTCATCATAAACCCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS TCA 72 bp AAATGGCTCATTGTTGTACAGCGGGGAGCCTGGAGGTaGCACAAAGGTATCAGGACCCTCCCAAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: KWLIVVQRGAWR*HKGIRTLPKPS
Trigger: GGAAGGCTTTGGGAGGGTCCTGATACCTTTGTGTCACCTCCAGGCTCCCCGCTGTACAACAATGAGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 72 bp GCACTCCCCAAACGTGCCTTGAGCAACATAGAGAATTaGTCGAGCCACCTTGAGTCTCTTCTCCCTGGCAGT +
Preference number: 6 (lower is better)
Translates to: ALPKRALSNIEN*SSHLESLLPGS
Trigger: ACTGCCAGGGAGAAGAGACTCAAGGTGGCTCGAGCAATTCTCTATGTTGCTCAAGGCACGTTTGGGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
ENST00000540970.1
CDS CCA 72 bp ACTCACCTGTTTCAGAGTCTTGATGCTTTCGTGGATTaGCCTGGGCAGCCCCACCACTGTGTTCGTGTCACT +
Preference number: 6 (lower is better)
Translates to: THLFQSLDAFVD*PGQPHHCVRVT
Trigger: AGTGACACGAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS CAA 72 bp GTCCGGTGCTGGTTGGTATCCAGCTCAGTCCACTTCTaGTCTGTCACTGCAGGGCAAGAAACCAGTTACACC +
Preference number: 6 (lower is better)
Translates to: VRCWLVSSSVHF*SVTAGQETSYT
Trigger: GGTGTAACTGGTTTCTTGCCCTGCAGTGACAGACAAGAAGTGGACTGAGCTGGATACCAACCAGCACCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CAA 90 bp AACAAGCCAAAAGCTCACCCAAAGCCACTCACCTGTTTCAGAGTCTaGATGCTTTCGTGGATTGGCCTGGGCAGCCCCACCACTGTGTTC +
Preference number: 6 (lower is better)
Translates to: NKPKAHPKPLTCFRV*MLSWIGLGSPTTVF
Trigger: GAACACAGTGGTGGGGCTGCCCAGGCCAATCCACGAAAGCATCAAGACTCTGAAACAGGTGAGTGGCTTTGGGTGAGCTTTTGGCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS CCA 72 bp TGCCCAATCACTGGCGAAAAGGGATGTCTCTATACCTaGCACAGGTTCAGCTGTTGCTGGCAAGCTGTCTAC +
Preference number: 6 (lower is better)
Translates to: CPITGEKGCLYT*HRFSCCWQAVY
Trigger: GTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTTTTCGCCAGTGATTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS CCA 72 bp GGACCTTGCCCTCTTTCCTCCAGGGATGAAAGGCCTTaGCTGAAGGGCCATGTCTTAGAACATTCATGCAGA +
Preference number: 6 (lower is better)
Translates to: GPCPLSSRDERP*LKGHVLEHSCR
Trigger: TCTGCATGAATGTTCTAAGACATGGCCCTTCAGCCAAGGCCTTTCATCCCTGGAGGAAAGAGGGCAAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CCA 72 bp GATAGCTCAGGGCAACTAATTTATGCCAAACCTTTCTaGAGACAGGGTCTGGCCGGCGCCCTGTGGTATATC +
Preference number: 6 (lower is better)
Translates to: DSSGQLIYAKPF*RQGLAGALWYI
Trigger: GATATACCACAGGGCGCCGGCCAGACCCTGTCTCCAGAAAGGTTTGGCATAAATTAGTTGCCCTGAGCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CAA 72 bp GTCACCATCCCAAACAGCATGATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCTGGAGGTGACACAAAG +
Preference number: 6 (lower is better)
Translates to: VTIPNSMMANGS*LYSGEPGGDTK
Trigger: CTTTGTGTCACCTCCAGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CAA 90 bp CACTGGCGAAAAGGGATGTCTCTATACCTGGCACAGGTTCAGCTGTaGCTGGCAAGCTGTCTACAAACTAACCCTCCTCATCCTGGGTGT +
Preference number: 6 (lower is better)
Translates to: HWRKGMSLYLAQVQL*LASCLQTNPPHPGC
Trigger: ACACCCAGGATGAGGAGGGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTTTTCGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS CAA 90 bp AATTTGGTCACCATCCCAAACAGCATGATGGCAAATGGCTCATTGTaGTACAGCGGGGAGCCTGGAGGTGACACAAAGGTATCAGGACCC +
Preference number: 6 (lower is better)
Translates to: NLVTIPNSMMANGSL*YSGEPGGDTKVSGP
Trigger: GGGTCCTGATACCTTTGTGTCACCTCCAGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGTGACCAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 72 bp GTAAGCACTGTGAAGGCAGGGATCACATGTCGTGTGTaGCACTATATCCTGGTACCAGCAAATGGGGATCAC +
Preference number: 6 (lower is better)
Translates to: VSTVKAGITCRV*HYILVPANGDH
Trigger: GTGATCCCCATTTGCTGGTACCAGGATATAGTGGCACACACGACATGTGATCCCTGCCTTCACAGTGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CCA 72 bp GGATGTCTCTATACCTGGCACAGGTTCAGCTGTTGCTaGCAAGCTGTCTACAAACTAACCCTCCTCATCCTG +
Preference number: 6 (lower is better)
Translates to: GCLYTWHRFSCC*QAVYKLTLLIL
Trigger: CAGGATGAGGAGGGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS CAA 72 bp ACCATCCCAAACAGCATGATGGCAAATGGCTCATTGTaGTACAGCGGGGAGCCTGGAGGTGACACAAAGGTA +
Preference number: 6 (lower is better)
Translates to: TIPNSMMANGSL*YSGEPGGDTKV
Trigger: TACCTTTGTGTCACCTCCAGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS GCA 72 bp AAGGGATGTCTCTATACCTGGCACAGGTTCAGCTGTTaGTGGCAAGCTGTCTACAAACTAACCCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: KGCLYTWHRFSC*WQAVYKLTLLI
Trigger: GATGAGGAGGGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS GCA 72 bp TATGTCTTGATGCCTAGCACAGTGCTGGCTCGTAGGTaGTGGAAAAATGGACACAGTGGGAAATACCAGCTG +
Preference number: 6 (lower is better)
Translates to: YVLMPSTVLARR*WKNGHSGKYQL
Trigger: CAGCTGGTATTTCCCACTGTGTCCATTTTTCCAGCACCTACGAGCCAGCACTGTGCTAGGCATCAAGACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CCA 72 bp GTCCTCCTCAAAGCATTTTCGATTCATCAGGAATTCTaGCCCTTCCGTGTAGCTGTAAAGCTCCGAGAGCTC +
Preference number: 6 (lower is better)
Translates to: VLLKAFSIHQEF*PFRVAVKLREL
Trigger: GAGCTCTCGGAGCTTTACAGCTACACGGAAGGGCCAGAATTCCTGATGAATCGAAAATGCTTTGAGGAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369795.8
ENST00000369796.5
ENST00000485775.5
CDS CAA 90 bp CAAAATTTGGTCACCATCCCAAACAGCATGATGGCAAATGGCTCATaGTTGTACAGCGGGGAGCCTGGAGGTGACACAAAGGTATCAGGA +
Preference number: 6 (lower is better)
Translates to: QNLVTIPNSMMANGS*LYSGEPGGDTKVSG
Trigger: TCCTGATACCTTTGTGTCACCTCCAGGCTCCCCGCTGTACAACAATGAGCCATTTGCCATCATGCTGTTTGGGATGGTGACCAAATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CCA 72 bp CATGTCTTTATAGAGACCCAGGCAACTCCTGAACAATaGACTGAAGCCACTCCCAAGGAGAATTCCGTGACA +
Preference number: 6 (lower is better)
Translates to: HVFIETQATPEQ*TEATPKENSVT
Trigger: TGTCACGGAATTCTCCTTGGGAGTGGCTTCAGTCCATTGTTCAGGAGTTGCCTGGGTCTCTATAAAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535003.5
CDS CAA 72 bp AAAGGGATGTCTCTATACCTGGCACAGGTTCAGCTGTaGCTGGCAAGCTGTCTACAAACTAACCCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: KGMSLYLAQVQL*LASCLQTNPPH
Trigger: ATGAGGAGGGTTAGTTTGTAGACAGCTTGCCAGCAACAGCTGAACCTGTGCCAGGTATAGAGACATCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS CAA 72 bp CACTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATaGAACGTGCCCACCTCCAGGAGGAGAAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: HSISMFRSSTKA*NVPTSRRRKML
Trigger: CAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CAA 90 bp CATACTCAAACTCCAGGTCTGGTGACTCCGAATAGCCCTGTATTTTaGTCAGAGATGTGTGAACCACAGCAACTCCATCTTGAACAGGGG +
Preference number: 6 (lower is better)
Translates to: HTQTPGLVTPNSPVF*SEMCEPQQLHLEQG
Trigger: CCCCTGTTCAAGATGGAGTTGCTGTGGTTCACACATCTCTGACAAAAATACAGGGCTATTCGGAGTCACCAGACCTGGAGTTTGAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369796.5
CDS CAA 90 bp CATTTTACAGAGGAGGAAATGACTTTCCCCAATTCACTCAGGAGTTaGCTCAGTGGTAGAGTCTACACTAGAATCCAGGCCAACAGGACC +
Preference number: 6 (lower is better)
Translates to: HFTEEEMTFPNSLRS*LSGRVYTRIQANRT
Trigger: GGTCCTGTTGGCCTGGATTCTAGTGTAGACTCTACCACTGAGCAAACTCCTGAGTGAATTGGGGAAAGTCATTTCCTCCTCTGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461054.1
CDS TCA 72 bp TGTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGAGGAGAAAGATGTTGT +
Preference number: 6 (lower is better)
Translates to: CLFPCSEAPPKH*TCPPPGGERCC
Trigger: ACAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000369796.5
CDS TCA 72 bp GTTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGAGGAGAAAGATGTTGT +
Preference number: 6 (lower is better)
Translates to: VLFPCSEAPPKH*TCPPPGGERCC
Trigger: ACAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS TCA 72 bp ACTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATTaGACGTGCCCACCTCCAGGAGGAGAAAGATGTTGT +
Preference number: 6 (lower is better)
Translates to: TLFPCSEAPPKH*TCPPPGGERCC
Trigger: ACAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540970.1
CDS CCA 72 bp GCAGACAACAGTCTTAAAAGGCTTCTCCCTACAGGCTaGTTTCACTCTACTCACTTAGGACCAAACAAGCCA +
Preference number: 6 (lower is better)
Translates to: ADNSLKRLLPTG*FHSTHLGPNKP
Trigger: TGGCTTGTTTGGTCCTAAGTGAGTAGAGTGAAACCAGCCTGTAGGGAGAAGCCTTTTAAGACTGTTGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539541.1
CDS CAA 72 bp ACTCCAGGTCTGGTGACTCCGAATAGCCCTGTATTTTaGTCAGAGATGTGTGAACCACAGCAACTCCATCTT +
Preference number: 6 (lower is better)
Translates to: TPGLVTPNSPVF*SEMCEPQQLHL
Trigger: AAGATGGAGTTGCTGTGGTTCACACATCTCTGACAAAAATACAGGGCTATTCGGAGTCACCAGACCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369796.5
CDS CAA 72 bp TTGTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATaGAACGTGCCCACCTCCAGGAGGAGAAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: LSISMFRSSTKA*NVPTSRRRKML
Trigger: CAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369795.8
ENST00000369796.5
CDS CAA 72 bp TGTTCTATTTCCATGTTCAGAAGCTCCACCAAAGCATaGAACGTGCCCACCTCCAGGAGGAGAAAGATGTTG +
Preference number: 6 (lower is better)
Translates to: CSISMFRSSTKA*NVPTSRRRKML
Trigger: CAACATCTTTCTCCTCCTGGAGGTGGGCACGTTCAATGCTTTGGTGGAGCTTCTGAACATGGAAATAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485775.5
CDS TCA 72 bp CTGATGTGTCCCACCCCAGTTTCCCCACCTATAAGATaGGGAAATATCTGTTACAAGAGAACTTGTAAAGCA +
Preference number: 6 (lower is better)
Translates to: LMCPTPVSPPIR*GNICYKRTCKA
Trigger: TGCTTTACAAGTTCTCTTGTAACAGATATTTCCTCATCTTATAGGTGGGGAAACTGGGGTGGGACACATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS CAA 72 bp AAGACTCAGCCTTTGATCCAGGCTGCCTTGTTTAAATaGTTGGTGACATTTTCCTGGGTGATATTTTCATCC +
Preference number: 6 (lower is better)
Translates to: KTQPLIQAALFK*LVTFSWVIFSS
Trigger: GGATGAAAATATCACCCAGGAAAATGTCACCAACAATTTAAACAAGGCAGCCTGGATCAAAGGCTGAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473429.5
CDS TCA 72 bp AAGGAAATTTTGTGTATGTCAAGCAAATCTCAGATCTaGGGTTACCTCTTTCTCATCGTCCCTATCCCTTCT +
Preference number: 6 (lower is better)
Translates to: KEILCMSSKSQI*GYLFLIVPIPS
Trigger: AGAAGGGATAGGGACGATGAGAAAGAGGTAACCTCAGATCTGAGATTTGCTTGACATACACAAAATTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473429.5