Pregenerated sensors for STRC (Homo sapiens)

Ensembl gene IDs: ENSG00000242866

Ensembl transcript IDs: ENST00000432436.1, ENST00000448437.6, ENST00000460952.1, ENST00000471703.5, ENST00000485556.5

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	AACAAGGTAATATTTATTGCATGTTTGTGTATCATGCACTGTGCTAAGCCCACACACAGAACCAAGATATaGATCCAAGCCTGTCTGACT	+
Preference number: 2 (lower is better) Translates to: NKVIFIACLCIMHCAKPTHRTKI*IQACLT Trigger: AGTCAGACAGGCTTGGATTCATATCTTGGTTCTGTG...TGTGGGCTTAGCACAGTGCATGATACACAAACATGCAATAAATATTACCTTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432436.1
CDS-3UTR TCA 90 bp	AACAAGGTAATATTTATTGCATGTTTGTGTATCATGCACTGTGCTAAGCCCACACCACACTACTGCCTCTaGGTATTCGAGGAATTCCCC	+
Preference number: 4 (lower is better) Translates to: NKVIFIACLCIMHCAKPTPHYCL*VFEEFP Trigger: GGGGAATTCCTCGAATACTCAGAGGCAGTAGTGTGG...TGTGGGCTTAGCACAGTGCATGATACACAAACATGCAATAAATATTACCTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432436.1
CDS GCA 90 bp	GACAGGAACAATGTGAGTGGAAAAGCAGTGGATTGGGAGTCATACTaGTGGGTTTTAAGTCTTGCCTCTGCCCTTAGCTGTATAACTCTA	+
Preference number: 5 (lower is better) Translates to: DRNNVSGKAVDWESY*WVLSLASALSCITL Trigger: TAGAGTTATACAGCTAAGGGCAGAGGCAAGACTTAAAACCCAGCAGTATGACTCCCAATCCACTGCTTTTCCACTCACATTGTTCCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460952.1
CDS CCA 90 bp	AGGAACAATGTGAGTGGAAAAGCAGTGGATTGGGAGTCATACTGCTaGGTTTTAAGTCTTGCCTCTGCCCTTAGCTGTATAACTCTAGGT	+
Preference number: 5 (lower is better) Translates to: RNNVSGKAVDWESYC*VLSLASALSCITLG Trigger: ACCTAGAGTTATACAGCTAAGGGCAGAGGCAAGACTTAAAACCCAGCAGTATGACTCCCAATCCACTGCTTTTCCACTCACATTGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460952.1
CDS CCA 72 bp	TTCTCCCAGCCTTGGTCTTTTCATCTGAAAGCAGGGTaGGTGGCCTGGAAGATTTCTCAGGCCCTTCCAGCT	+
Preference number: 6 (lower is better) Translates to: FSQPWSFHLKAG*VAWKISQALPA Trigger: AGCTGGAAGGGCCTGAGAAATCTTCCAGGCCACCCACCCTGCTTTCAGATGAAAAGACCAAGGCTGGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000448437.6 ENST00000471703.5 ENST00000485556.5
CDS CCA 72 bp	ACCAGGCAAACAAAGTCCCTTAGCTTCTCCCAGCCTTaGTCTTTTCATCTGAAAGCAGGGTGGGTGGCCTGG	+
Preference number: 6 (lower is better) Translates to: TRQTKSLSFSQP*SFHLKAGWVAW Trigger: CCAGGCCACCCACCCTGCTTTCAGATGAAAAGACCAAGGCTGGGAGAAGCTAAGGGACTTTGTTTGCCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000448437.6 ENST00000471703.5 ENST00000485556.5
CDS GCA 72 bp	AATGTGAGTGGAAAAGCAGTGGATTGGGAGTCATACTaGTGGGTTTTAAGTCTTGCCTCTGCCCTTAGCTGT	+
Preference number: 6 (lower is better) Translates to: NVSGKAVDWESY*WVLSLASALSC Trigger: ACAGCTAAGGGCAGAGGCAAGACTTAAAACCCAGCAGTATGACTCCCAATCCACTGCTTTTCCACTCACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460952.1
CDS CCA 72 bp	GTGAGTGGAAAAGCAGTGGATTGGGAGTCATACTGCTaGGTTTTAAGTCTTGCCTCTGCCCTTAGCTGTATA	+
Preference number: 6 (lower is better) Translates to: VSGKAVDWESYC*VLSLASALSCI Trigger: TATACAGCTAAGGGCAGAGGCAAGACTTAAAACCCAGCAGTATGACTCCCAATCCACTGCTTTTCCACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460952.1
CDS CAA 72 bp	GAAAGACAGGAACAATGTGAGTGGAAAAGCAGTGGATaGGGAGTCATACTGCTGGGTTTTAAGTCTTGCCTC	+
Preference number: 6 (lower is better) Translates to: ERQEQCEWKSSG*GVILLGFKSCL Trigger: GAGGCAAGACTTAAAACCCAGCAGTATGACTCCCAATCCACTGCTTTTCCACTCACATTGTTCCTGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460952.1