Pregenerated sensors for STRADB (Homo sapiens)

Ensembl gene IDs: ENSG00000082146

Ensembl transcript IDs: ENST00000458269.6, ENST00000466770.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GCTCCCAGAAGATGGGCCAACCAGGACCCTCAGGAGATAGTGATTTaGCTACAGCACTGCATCGCCTTAGCTTGCGTCGACAAAACTATT	+
Preference number: 5 (lower is better) Translates to: APRRWANQDPQEIVI*LQHCIALACVDKTI Trigger: AATAGTTTTGTCGACGCAAGCTAAGGCGATGCAGTGCTGTAGCCAAATCACTATCTCCTGAGGGTCCTGGTTGGCCCATCTTCTGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CCA 90 bp	GATCTAATCAGTGAACGCGATTTTCCTATAGGAGCTCCCAGAAGATaGGCCAACCAGGACCCTCAGGAGATAGTGATTTGGCTACAGCAC	+
Preference number: 5 (lower is better) Translates to: DLISERDFPIGAPRR*ANQDPQEIVIWLQH Trigger: GTGCTGTAGCCAAATCACTATCTCCTGAGGGTCCTGGTTGGCCCATCTTCTGGGAGCTCCTATAGGAAAATCGCGTTCACTGATTAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CCA 72 bp	AGATGGGCCAACCAGGACCCTCAGGAGATAGTGATTTaGCTACAGCACTGCATCGCCTTAGCTTGCGTCGAC	+
Preference number: 6 (lower is better) Translates to: RWANQDPQEIVI*LQHCIALACVD Trigger: GTCGACGCAAGCTAAGGCGATGCAGTGCTGTAGCCAAATCACTATCTCCTGAGGGTCCTGGTTGGCCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CAA 72 bp	AAGATGGGCCAACCAGGACCCTCAGGAGATAGTGATTaGGCTACAGCACTGCATCGCCTTAGCTTGCGTCGA	+
Preference number: 6 (lower is better) Translates to: KMGQPGPSGDSD*ATALHRLSLRR Trigger: TCGACGCAAGCTAAGGCGATGCAGTGCTGTAGCCAAATCACTATCTCCTGAGGGTCCTGGTTGGCCCATCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CAA 90 bp	AGCTCCCAGAAGATGGGCCAACCAGGACCCTCAGGAGATAGTGATTaGGCTACAGCACTGCATCGCCTTAGCTTGCGTCGACAAAACTAT	+
Preference number: 6 (lower is better) Translates to: SSQKMGQPGPSGDSD*ATALHRLSLRRQNY Trigger: ATAGTTTTGTCGACGCAAGCTAAGGCGATGCAGTGCTGTAGCCAAATCACTATCTCCTGAGGGTCCTGGTTGGCCCATCTTCTGGGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CAA 90 bp	CCCTCAGGAGATAGTGATTTGGCTACAGCACTGCATCGCCTTAGCTaGCGTCGACAAAACTATTTAAGTGAGAAGCAGTTCTTTGCTGAA	+
Preference number: 6 (lower is better) Translates to: PSGDSDLATALHRLS*RRQNYLSEKQFFAE Trigger: TTCAGCAAAGAACTGCTTCTCACTTAAATAGTTTTGTCGACGCAAGCTAAGGCGATGCAGTGCTGTAGCCAAATCACTATCTCCTGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CAA 72 bp	GATAGTGATTTGGCTACAGCACTGCATCGCCTTAGCTaGCGTCGACAAAACTATTTAAGTGAGAAGCAGTTC	+
Preference number: 6 (lower is better) Translates to: DSDLATALHRLS*RRQNYLSEKQF Trigger: GAACTGCTTCTCACTTAAATAGTTTTGTCGACGCAAGCTAAGGCGATGCAGTGCTGTAGCCAAATCACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458269.6
CDS CAA 72 bp	GAATGTATGTCAGAAGCCCAATTCTTAGCTACAACCTaGACTAAAGGAAATAATTGTAGAGGTATCCTTCAA	+
Preference number: 6 (lower is better) Translates to: ECMSEAQFLATT*TKGNNCRGILQ Trigger: TTGAAGGATACCTCTACAATTATTTCCTTTAGTCAAGGTTGTAGCTAAGAATTGGGCTTCTGACATACATTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466770.1

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