RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STON2 (Homo sapiens)

Ensembl gene IDs: ENSG00000140022

Ensembl transcript IDs: ENST00000553821.2, ENST00000554710.1, ENST00000555226.1, ENST00000555284.1, ENST00000555447.5, ENST00000556280.1, ENST00000557055.5, ENST00000614646.4, ENST00000649389.1, ENST00000652748.1

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATCTGCTTTCCCACAATGCTCTGGTAGAATACCACTGGGGTTGCTaGTCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTC +
Preference number: 1 (lower is better)
Translates to: HLLSHNALVEYHWGC*SKAHGGATVLKASV
Trigger: GACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCTACCAGAGCATTGTGGGAAAGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR TCA 90 bp CAGGTATTGACTGCAACTTCAGCTACTCAGGAAGACACCCTATCATaGCTCAGGAAGACACCCTATCATGACTCTGGGATCAGGATTCCT +
Preference number: 1 (lower is better)
Translates to: QVLTATSATQEDTLS*LRKTPYHDSGIRIP
Trigger: AGGAATCCTGATCCCAGAGTCATGATAGGGTGTCTTCCTGAGTCATGATAGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR TCA 90 bp AGATCTGGTATACTGTTCCCAACATGCAGTGGCCACAGCAGGTATTaGCTGCAACTTCAGCTACTCAGGAAGACACCCTATCATGACTCA +
Preference number: 1 (lower is better)
Translates to: RSGILFPTCSGHSRY*LQLQLLRKTPYHDS
Trigger: TGAGTCATGATAGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGCATGTTGGGAACAGTATACCAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR CCA 90 bp GTAACTGCAAACAGGAAGATCTGGTATACTGTTCCCAACATGCAGTaGCCACAGCAGGTATTGACTGCAACTTCAGCTACTCAGGAAGAC +
Preference number: 1 (lower is better)
Translates to: VTANRKIWYTVPNMQ*PQQVLTATSATQED
Trigger: GTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGCATGTTGGGAACAGTATACCAGATCTTCCTGTTTGCAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR GCA 90 bp AACAATTTGCTGTTGGGACCTGACTATACATCTGCTTTCCCACAATaGTCTGGTAGAATACCACTGGGGTTGCTGATCCAAAGCACATGG +
Preference number: 1 (lower is better)
Translates to: NNLLLGPDYTSAFPQ*SGRIPLGLLIQSTW
Trigger: CCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCTACCAGAGCATTGTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR GCA 90 bp CTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTaGTGTTGGGACCTGACTATACATCTGCTTTCCCACAATGCTCTG +
Preference number: 1 (lower is better)
Translates to: LFPHPYTLELSHPTI*CWDLTIHLLSHNAL
Trigger: CAGAGCATTGTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR TCA 90 bp AACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACAGATaGACATCAGAAGGCAATCGTGCTAACACTGATGTGGGAGGTTCT +
Preference number: 1 (lower is better)
Translates to: NFSRLPLPESYASDR*TSEGNRANTDVGGS
Trigger: AGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATGTTCATCTGTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR CCA 90 bp CCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTaGGACCTGACTATACATCTGCTTTCCCACAATGCTCTGGTAGAA +
Preference number: 1 (lower is better)
Translates to: PHPYTLELSHPTICC*DLTIHLLSHNALVE
Trigger: TTCTACCAGAGCATTGTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CCA 90 bp TCAGGGTTTCCTGGTAAAATACAAGTAACTGCAAACAGGAAGATCTaGTATACTGTTCCCAACATGCAGTGGCCACAGCAGGTATTGACT +
Preference number: 1 (lower is better)
Translates to: SGFPGKIQVTANRKI*YTVPNMQWPQQVLT
Trigger: AGTCAATACCTGCTGTGGCCACTGCATGTTGGGAACAGTATACCAGATCTTCCTGTTTGCAGTTACTTGTATTTTACCAGGAAACCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR CCA 90 bp CGAGTGACAGATGAACATCAGAAGGCAATCGTGCTAACACTGATGTaGGAGGTTCTTTTCCTGACTGTAACAGTCACAACAAACCACATA +
Preference number: 1 (lower is better)
Translates to: RVTDEHQKAIVLTLM*EVLFLTVTVTTNHI
Trigger: TATGTGGTTTGTTGTGACTGTTACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATGTTCATCTGTCACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAATCCCAGGATGTTTACTaGGTGTCCTCCTTCAATTTT +
Preference number: 2 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQSQDVY*VSSFNF
Trigger: AAAATTGAAGGAGGACACTCAGTAAACATCCTGGGA...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGATGGAGGCGCAACAGTaGTTAAGGCTTCAGTCATGG +
Preference number: 2 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWMEAQQ*LRLQSW
Trigger: CCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCAT...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR TCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGTTTGCTGTTGGGACCTaGCTATACATCTGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWFAVGT*LYICFP
Trigger: GGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAA...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp CTCCAACAGTCAGGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTATACTGTTCCCAACATaGAGTGGCCACAGCAGGTAT +
Preference number: 2 (lower is better)
Translates to: LQQSGEPRALGMTRIKEPILFPT*SGHSRY
Trigger: ATACCTGCTGTGGCCACTGCATGTTGGGAACAGTAT...AGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGGCAGGAAGAGGATGCTaGAATTCCTTACTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: CLRLQSWCGARQHPQLELAGRGC*NSLLCP
Trigger: TGGACAGAGTAAGGAATTCCAGCATCCTCTTCCTGC...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR TCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCTCCCAGGATGTTTACTaGGTGTCCTCCTTCAATTTT +
Preference number: 2 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGSQDVY*VSSFNF
Trigger: AAAATTGAAGGAGGACACTCAGTAAACATCCTGGGA...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGATCATCCCCAGTACTTaGAGGGTTAGACCTACTTCT +
Preference number: 2 (lower is better)
Translates to: CLRLQSWCGARQHPQLELIIPST*RVRPTS
Trigger: AGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGAT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTaGGGACCTGACTATACATCTGCTTTCCCACAATGCTCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: PSPLYFRTLTPNNLL*GPDYTSAFPQCSGR
Trigger: TCTACCAGAGCATTGTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CCA 90 bp GTGCTAACACTGATGTGGGAGGTTCTTTTCCTGACTGTAACAGTCACAACAAACGTTCCCAACATGCAGTaGCCACAGCAGGTATTGACT +
Preference number: 2 (lower is better)
Translates to: VLTLMWEVLFLTVTVTTNVPNMQ*PQQVLT
Trigger: AGTCAATACCTGCTGTGGCCACTGCATGTTGGGAAC...GTTTGTTGTGACTGTTACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR TCA 90 bp CAGTGTGAATTTGGGAATTCACTGAGATTGAATCTACCTCTTGAACTGAACATCGGCCACAGCAGGTATTaGCTGCAACTTCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: QCEFGNSLRLNLPLELNIGHSRY*LQLQLL
Trigger: GAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCC...GATGTTCAGTTCAAGAGGTAGATTCAATCTCAGTGAATTCCCAAATTCACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR TCA 90 bp CAGTTAAAGAATGGAGACACCTCAAAAAGGTCTAGTAAGACCCAAAGAGGAAATGCTCCAACAGTCAGGTaGACCTCGTGCTTTAGGCAT +
Preference number: 2 (lower is better)
Translates to: QLKNGDTSKRSSKTQRGNAPTVR*TSCFRH
Trigger: ATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAGC...ATTTCCTCTTTGGGTCTTACTAGACCTTTTTGAGGTGTCTCCATTCTTTAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR GCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCATGGAGGCGCAACAGTaGTTAAGGCTTCAGTCATGG +
Preference number: 2 (lower is better)
Translates to: FITDITRMEGEEWCFSVIMEAQQ*LRLQSW
Trigger: CCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCAT...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGCCTCAACACCCATTTTaGAGAATGTGGGTCCATTCA +
Preference number: 2 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEPQHPF*RMWVHS
Trigger: TGAATGGACCCACATTCTGCAAAATGGGTGTTGAGG...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTCAATCCAACACATCTaGCTACCACAAATACAACCA +
Preference number: 2 (lower is better)
Translates to: ITDITRMEGEEWCFSVIASIQHI*LPQIQP
Trigger: TGGTTGTATTTGTGGTAGTCAGATGTGTTGGATTGA...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR TCA 90 bp GGATTCTTAATTAACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACGAAGACACCCTATCATaGCTCAGGAAGACACCCTAT +
Preference number: 2 (lower is better)
Translates to: GFLINFSRLPLPESYASDEDTLS*LRKTPY
Trigger: ATAGGGTGTCTTCCTGAGTCATGATAGGGTGTCTTC...GTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAATTAAGAATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR GCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGTCTCTCATCTGGTTTTaGCATAACTTACAAATAGTC +
Preference number: 2 (lower is better)
Translates to: CLRLQSWCGARQHPQLELSLIWF*HNLQIV
Trigger: GACTATTTGTAAGTTATGGCAAAACCAGATGAGAGA...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTATCATCCCCAGTACTTaGAGGGTTAGACCTACTTCT +
Preference number: 2 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSIIPST*RVRPTS
Trigger: AGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGAT...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTTAAGGCTTCAGTCATaGTGTGGGGCTAGACAGCAT +
Preference number: 2 (lower is better)
Translates to: FITDITRMEGEEWCFSVILRLQS*CGARQH
Trigger: ATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCTCTCATCTGGTTTTaGCATAACTTACAAATAGTC +
Preference number: 2 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSLIWF*HNLQIV
Trigger: GACTATTTGTAAGTTATGGCAAAACCAGATGAGAGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp CCAGGAGGGAAATGTCTTGAAAGCTTAACAGTTAAAGAATGGAGACACCTCAAACAAACCACATACCAGTaGTGTGAGATAAGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: PGGKCLESLTVKEWRHLKQTTYQ*CEISRD
Trigger: GTCTCTGCTTATCTCACAGCACTGGTATGTGGTTTG...TTTGAGGTGTCTCCATTCTTTAACTGTTAAGCTTTCAAGACATTTCCCTCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR GCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTCACACCCAACAATTTaGTGTTGGGACCTGACTATA +
Preference number: 2 (lower is better)
Translates to: FITDITRMEGEEWCFSVISHPTI*CWDLTI
Trigger: TATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp CAGTGTGAATTTGGGAATTCACTGAGATTGAATCTACCTCTTGAACTGAACATCACAGCAGGTATTGACTaGAACTTCAGCTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: QCEFGNSLRLNLPLELNITAGID*NFSYSG
Trigger: TCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGT...GATGTTCAGTTCAAGAGGTAGATTCAATCTCAGTGAATTCCCAAATTCACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CCA 90 bp GGATTCTTAATTAACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACGCAAACAGGAAGATCTaGTATACTGTTCCCAACATG +
Preference number: 2 (lower is better)
Translates to: GFLINFSRLPLPESYASDANRKI*YTVPNM
Trigger: CATGTTGGGAACAGTATACCAGATCTTCCTGTTTGC...GTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAATTAAGAATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTCAATCCAACACATCTaGCTACCACAAATACAACCA +
Preference number: 2 (lower is better)
Translates to: SLDLGFIHPDALKFITDISIQHI*LPQIQP
Trigger: TGGTTGTATTTGTGGTAGTCAGATGTGTTGGATTGA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR TCA 90 bp CAGTTAAAGAATGGAGACACCTCAAAAAGGTCTAGTAAGACCCAAAGAGGAAATAGAAAGTTATGCGAGTaGCAGATGAACATCAGAAGG +
Preference number: 2 (lower is better)
Translates to: QLKNGDTSKRSSKTQRGNRKLCE*QMNIRR
Trigger: CCTTCTGATGTTCATCTGTCACTCGCATAACTTTCT...ATTTCCTCTTTGGGTCTTACTAGACCTTTTTGAGGTGTCTCCATTCTTTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR TCA 90 bp TGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAGAAAGCAAATCCTGTGACTaGAACCTTAGAGAGATGGAA +
Preference number: 2 (lower is better)
Translates to: WSERSDSWNQNIMFPTLESKSCD*NLREME
Trigger: TTCCATCTCTCTAAGGTTTCAGTCACAGGATTTGCT...TTCTAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCCCTTTTCTCTCATCTaGTTTTGCCATAACTTACAA +
Preference number: 2 (lower is better)
Translates to: HILLFPHPYTLELSHPTIPFSLI*FCHNLQ
Trigger: TTGTAAGTTATGGCAAAACCAGATGAGAGAAAAGGG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR GCA 90 bp AATGCCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAATCTCAAGACTGCCTTTaGCAGAAAGTTATGCGAGTG +
Preference number: 2 (lower is better)
Translates to: NAPYKCLRYYVYLFQESESQDCL*QKVMRV
Trigger: CACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGA...TTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR CAA 90 bp GAACTCCCAAATGCCCCTTACAAATGCCTCAGGTATTATGTATATTaGTTTCAGGAATCAGAAGTGGACTGTATTTTTCAGTGTGAATTT +
Preference number: 2 (lower is better)
Translates to: ELPNAPYKCLRYYVY*FQESEVDCIFQCEF
Trigger: AAATTCACACTGAAAAATACAGTCCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATTTGGGAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR GCA 72 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTaGTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAG +
Preference number: 3 (lower is better)
Translates to: GVADPKHMEAQQ*LRLQSWCGARQ
Trigger: CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CCA 72 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATaGTGTGGGGCTAGACAGCATCCCCAACTAGAATTG +
Preference number: 3 (lower is better)
Translates to: HMEAQQCLRLQS*CGARQHPQLEL
Trigger: CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CAA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCACTAGAATTGAGGGTTaGATCTGTGGGGTAACACGA +
Preference number: 3 (lower is better)
Translates to: SKAHGGATVLKASVMVWGTRIEG*ICGVTR
Trigger: TCGTGTTACCCCACAGATCAAACCCTCAATTCTAGT...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR TCA 72 bp TCCCACAATGCTCTGGTAGAATACCACTGGGGTTGCTaGTCCAAAGCACATGGAGGCGCAACAGTGCTTAAG +
Preference number: 3 (lower is better)
Translates to: SHNALVEYHWGC*SKAHGGATVLK
Trigger: CTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCTACCAGAGCATTGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCCTTACTCTGTCCAGTaGGAATCAATCCAACACATC +
Preference number: 3 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLPYSVQ*ESIQHI
Trigger: GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGG...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGAGAATACCACTGGGGTaGCTGATCCAAAGCACATGG +
Preference number: 3 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWRIPLG*LIQSTW
Trigger: CCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCT...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR TCA 72 bp ACTGCAACTTCAGCTACTCAGGAAGACACCCTATCATaGCTCAGGAAGACACCCTATCATGACTCTGGGATC +
Preference number: 3 (lower is better)
Translates to: TATSATQEDTLS*LRKTPYHDSGI
Trigger: GATCCCAGAGTCATGATAGGGTGTCTTCCTGAGTCATGATAGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR TCA 72 bp ATACTGTTCCCAACATGCAGTGGCCACAGCAGGTATTaGCTGCAACTTCAGCTACTCAGGAAGACACCCTAT +
Preference number: 3 (lower is better)
Translates to: ILFPTCSGHSRY*LQLQLLRKTPY
Trigger: ATAGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGCATGTTGGGAACAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CAA 90 bp CATCAGAAGGCAATCGTGCTAACACTGATGTGGGAGGTTCTTTTCCTGACTGTATGGCCACAGCAGGTATaGACTGCAACTTCAGCTACT +
Preference number: 3 (lower is better)
Translates to: HQKAIVLTLMWEVLFLTVWPQQV*TATSAT
Trigger: AGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCA...TACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR CCA 72 bp AACAGGAAGATCTGGTATACTGTTCCCAACATGCAGTaGCCACAGCAGGTATTGACTGCAACTTCAGCTACT +
Preference number: 3 (lower is better)
Translates to: NRKIWYTVPNMQ*PQQVLTATSAT
Trigger: AGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGCATGTTGGGAACAGTATACCAGATCTTCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CAA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCCTTACTCTGTCCAGTaGGAATCAATCCAACACATC +
Preference number: 3 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAPYSVQ*ESIQHI
Trigger: GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR GCA 72 bp CACCCCTATACTTTAGAACTCTCACACCCAACAATTTaGTGTTGGGACCTGACTATACATCTGCTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: HPYTLELSHPTI*CWDLTIHLLSH
Trigger: GTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CCA 72 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTaGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACC +
Preference number: 3 (lower is better)
Translates to: IYLIDYPIIPST*RVRPTSVSGST
Trigger: GGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CCA 72 bp GATGAACATCAGAAGGCAATCGTGCTAACACTGATGTaGGAGGTTCTTTTCCTGACTGTAACAGTCACAACA +
Preference number: 3 (lower is better)
Translates to: DEHQKAIVLTLM*EVLFLTVTVTT
Trigger: TGTTGTGACTGTTACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATGTTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CAA 90 bp CCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAGTGGCCCTCAACACCCATTTaGCAGAATGTGGGTCCATTC +
Preference number: 3 (lower is better)
Translates to: PLTNASGIMYICFRNQKWPSTPI*QNVGPF
Trigger: GAATGGACCCACATTCTGCAAAATGGGTGTTGAGGG...CCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CAA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTATCCTAACATCTATTTaGGAGACCTGTCTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTILTSI*ETCLCL
Trigger: GAGGCACAGACAGGTCTCCAAAATAGATGTTAGGAT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CAA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCATCCTAACATCTATTTaGGAGACCTGTCTGTGCCTC +
Preference number: 3 (lower is better)
Translates to: FITDITRMEGEEWCFSVIILTSI*ETCLCL
Trigger: GAGGCACAGACAGGTCTCCAAAATAGATGTTAGGAT...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR TCA 72 bp ATTCACTGGATCTTGGGTTCATCCATCCTGACGCACTaGAATTTATTACAGACATTACAAGAATGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: IHWILGSSILTH*NLLQTLQEWRV
Trigger: CACCCTCCATTCTTGTAATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR TCA 72 bp ATGATGAATGATGGAAAATGTAAGGCTTGGAACAGCTaGATCATTCACTGGATCTTGGGTTCATCCATCCTG +
Preference number: 3 (lower is better)
Translates to: MMNDGKCKAWNS*IIHWILGSSIL
Trigger: CAGGATGGATGAACCCAAGATCCAGTGAATGATTCAGCTGTTCCAAGCCTTACATTTTCCATCATTCATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CCA 72 bp TATACTTTAGAACTCTCACACCCAACAATTTGCTGTTaGGACCTGACTATACATCTGCTTTCCCACAATGCT +
Preference number: 3 (lower is better)
Translates to: YTLELSHPTICC*DLTIHLLSHNA
Trigger: AGCATTGTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR-3UTR CAA 90 bp CCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAGTGGTTCTCAAGACTGCCTTaGCCAGAAAGTTATGCGAGT +
Preference number: 3 (lower is better)
Translates to: PLTNASGIMYICFRNQKWFSRLP*PESYAS
Trigger: ACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAA...CCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR-3UTR CAA 90 bp TGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAGAAACATGCAACTGTCTATaGGTCATGAGGTATAAAAAG +
Preference number: 3 (lower is better)
Translates to: WSERSDSWNQNIMFPTLETCNCL*VMRYKK
Trigger: CTTTTTATACCTCATGACCAATAGACAGTTGCATGT...TTCTAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGGAGGTGCTCTTCCGTaGCCCCCTGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLGGALP*PPASGQ
Trigger: CTGCCCACTCGCAGGGGGGCACGGAAGAGCACCTCC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGGCCCAGGCGGCACTCTaGGAGCCCAGACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQAQAAL*EPRQET
Trigger: AGTTTCCTGTCTGGGCTCGCAGAGTGCCGCCTGGGC...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCCCACCCGGCCGCACTaGTCTCGCCACGATCCCTCC +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIPTRPH*SRHDPS
Trigger: GGAGGGATCGTGGCGAGAGCAGTGCGGCCGGGTGGG...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACAAAGCCGGCTTCTCTaGCCGCGGGATACCCACCCG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSQSRLL*PRDTHP
Trigger: CGGGTGGGTATCCCGCGGCCAGAGAAGCCGGCTTTG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR TCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGACTGAACCCAGTTGCTaGTGGCCGAGGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQTEPSC*WPRPGQ
Trigger: CTGACCTGGCCTCGGCCATCAGCAACTGGGTTCAGT...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGAGGTCAGGTGGGGGCTaGTCAGGGCTCCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELRSGGG*SGLPGG
Trigger: CCCACCTGGGAGCCCTGAGCAGCCCCCACCTGACCT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCATCCTCAGCCAGCTCTaGACCTCCACCTCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGILSQL*TSTSAP
Trigger: TGGGGCAGAGGTGGAGGTGCAGAGCTGGCTGAGGAT...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAGTGCCCATTCATGGCTaGACTGCTGGCCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQVPIHG*TAGLPA
Trigger: AGCTGGCAGGCCAGCAGTCCAGCCATGAATGGGCAC...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACTGGTCTGGGGAAGATaGCAGTCCTGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSLVWGR*QSWEVL
Trigger: GAGCACCTCCCAGGACTGTCATCTTCCCCAGACCAG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGAGGCTGGGACCGTGCTaGTCCAGGCGGGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWRLGPC*SRRVSI
Trigger: GATGCTCACCCGCCTGGATCAGCACGGTCCCAGCCT...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGGCGGAGAAGCCAGTTaGCATCCTCAGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLGGEAS*HPQPAL
Trigger: CAGAGCTGGCTGAGGATGTCAACTGGCTTCTCCGCC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTAGGTCAGGTGGGGGCTaGTCAGGGCTCCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPRSGGG*SGLPGG
Trigger: CCCACCTGGGAGCCCTGAGCAGCCCCCACCTGACCT...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAACTGGAGGGGCAGGGTaGCCATTCATGGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSTGGAG*PFMAGL
Trigger: CAGTCCAGCCATGAATGGGCACCCTGCCCCTCCAGT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAGAAGGAGACCCATTCTaGCTGGTGGGTGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQEGDPF*LVGGNH
Trigger: GTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTC...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGGAGTGGGAATGGTCTTaGGAGCCTCCATCCACCACA +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQEWEWS*EPPSTT
Trigger: TGTGGTGGATGGAGGCTCTCAAGACCATTCCCACTC...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAGGAGGAATTGTCAGTTaGGTCAGCCCCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQGGIVS*VSPRSL
Trigger: CAGGCTTCTGGGGCTGACTCAACTGACAATTCCTCC...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555447.5
CDS-3UTR TCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACGTCCTCTTGTCAGTTaGGTCAGCCCCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSRPLVS*VSPRSL
Trigger: CAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR GCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAAGTGGAGCCAAAACTTaGCCCCCGGTTCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQSGAKT*PPVHFG
Trigger: GCCAAAGTGAACCGGGGGGCAAGTTTTGGCTCCACT...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCTCAGCCCCAGAAGCCTaGCCACTCGTCTGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGSAPEA*PLVCSS
Trigger: TGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGA...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCAGGGTGCCCATTCATaGCTGGACTGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIQGAHS*LDCWPA
Trigger: GGCAGGCCAGCAGTCCAGCCATGAATGGGCACCCTG...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGACTGAACCCAGTTGCTaGTGGCCGAGGCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWTEPSC*WPRPGQ
Trigger: CTGACCTGGCCTCGGCCATCAGCAACTGGGTTCAGT...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGGTTGCCCTCCAAGGTaGAGCCTCAGTTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLGCPPR*SLSYRR
Trigger: CCTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGATGAGGTGGAGATGTaGTGGCCCAGGGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLDEVEM*WPRVCH
Trigger: ATGACACACCCTGGGCCAGCACATCTCCACCTCATC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCGCCTGGCCACTCGTCTaGTCCTCAGCATTGATGAGC +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGAWPLV*SSALMS
Trigger: GCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGC...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTTGGGAGCGCCTCTCCTaGTCCTCAAAGAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLWERLS*SSKKAL
Trigger: CAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCA...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCTGCACCTCCACCTCTaGCCCATTGACACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGLHLHL*PIDTCG
Trigger: GCCACAAGTGTCAATGGGGCAGAGGTGGAGGTGCAG...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCACTGCCGTCTGCCTaGCTGTCTGCCACTCCGTCC +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSLPSA*LSATPS
Trigger: GGACGGAGTGGCAGACAGGCAGGCAGACGGCAGTGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAACCCATTCTGACTGGTaGGTGGCAATCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQTHSDW*VAITWS
Trigger: GGACCATGTGATTGCCACCCACCAGTCAGAATGGGT...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCGTGCCCATTCATGGCTaGACTGCTGGCCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIVPIHG*TAGLPA
Trigger: AGCTGGCAGGCCAGCAGTCCAGCCATGAATGGGCAC...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATGAGGGGTCCAGGCGGTaGGTGCGGGTGGAGGTATGC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHEGSRR*VRVEVC
Trigger: GCATACCTCCACCCGCACCCACCGCCTGGACCCCTC...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR TCA 90 bp GCAGTGGCCACAGCAGGTATTGACTGCAACTTCAGCTACTCAGGAAGACACCCTGCTCCAACAGTCAGGTaGACCTCGTGCTTTAGGCAT +
Preference number: 4 (lower is better)
Translates to: AVATAGIDCNFSYSGRHPAPTVR*TSCFRH
Trigger: ATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAGC...AGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCGAGTGGGAATGGTCTTaGGAGCCTCCATCCACCACA +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGEWEWS*EPPSTT
Trigger: TGTGGTGGATGGAGGCTCTCAAGACCATTCCCACTC...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCAAGCTGCTTCAGAGATaGGGCCCATCTTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGKLLQR*GPSFQR
Trigger: CCTCTGAAAAGATGGGCCTCATCTCTGAAGCAGCTT...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACCTCTTCAAGGTAGTTaGGGCCAACTGTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQPLQGS*GQLCSS
Trigger: ACTTGAGCACAGTTGGCCTCAACTACCTTGAAGAGG...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTTGGTGGTGGTGGGCATaGTGTCCTGCCTCAAAACTA +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLWWWWA*CPASKL
Trigger: TAGTTTTGAGGCAGGACATCATGCCCACCACCACCA...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCTTCTCACAGGGAACCTaGGTGAGGGGGTCACGATTG +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGFSQGT*VRGSRL
Trigger: CAATCGTGACCCCCTCACTCAGGTTCCCTGTGAGAA...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAATGGAGTTGAAGGCATaGTCGTACTTGGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQMELKA*SYLAVP
Trigger: GGGAACTGCCAAGTACGAGCATGCCTTCAACTCCAT...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTGGAGGTGCTCTTCCGTaGCCCCCTGCGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIGGALP*PPASGQ
Trigger: CTGCCCACTCGCAGGGGGGCACGGAAGAGCACCTCC...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGCCCAGGTGGGGAAGCTaGTTCAGAGATGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELPRWGS*FRDEAH
Trigger: ATGGGCCTCATCTCTGAAGCAGCTTCCCCACCTGGG...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTGGTCCAGGCGGTGGGTaGGGGTGGAGGTATGCTCCG +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIGPGGG*GWRYAP
Trigger: CGGAGCATACCTCCACCCGCACCCACCGCCTGGACC...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACAAACCCAGGCAGTCTaGCTCCAGAGTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSQTQAV*LQSLYL
Trigger: CAAGTACAGACTCTGGAGCCAGACTGCCTGGGTTTG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCGAGGTGGAGATGTGCTaGCCCAGGGTGTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGEVEMC*PRVCHL
Trigger: AAGATGACACACCCTGGGCCAGCACATCTCCACCTC...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGCACCCGTCACGAGGCTaGGACCGTGCTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVHPSRG*DRADPG
Trigger: GCCTGGATCAGCACGGTCCCAGCCTCGTGACGGGTG...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATCATCCACACACCCATaGAAACGGCACTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSSSTHP*KRHSWS
Trigger: GCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGA...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CAA 72 bp GCTTTCCCACAATGCTCTGGTAGAATACCACTGGGGTaGCTGATCCAAAGCACATGGAGGCGCAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: AFPQCSGRIPLG*LIQSTWRRNSA
Trigger: AGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCTACCAGAGCATTGTGGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCACTGCTGACCTCAGGTaGACCCCAGAATACTGTCTG +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGTADLR*TPEYCL
Trigger: CAGACAGTATTCTGGGGTTCACCTGAGGTCAGCAGT...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGGAAGGAGACCCATTCTaGCTGGTGGGTGGCAATCAC +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELEGDPF*LVGGNH
Trigger: GTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTC...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAAAGCTGCTTCAGAGATaGGGCCCATCTTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSKLLQR*GPSFQR
Trigger: CCTCTGAAAAGATGGGCCTCATCTCTGAAGCAGCTT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTGCTTCAGAGGAGAGGTaGCTGGTGGTAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPASEER*LVVKGS
Trigger: GCTGCCCTTTACCACCAGTCACCTCTCCTCTGAAGC...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGGCTGATCCAGGCGGGTaGGCATCTAGTTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELADPGG*ASSSIQ
Trigger: CTGGATTGAACTAGATGCTCACCCGCCTGGATCAGC...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAATCTTCTCTTTATAGGTaGCACGGTCTATCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQSSLYR*HGLSAS
Trigger: GCTTGCGGATAGACCGTGTCACCTATAAAGAGAAGA...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCCCTGAACTGCATGGATaGAACTCAGGAAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGPELHG*NSGSHR
Trigger: ACGATGACTTCCTGAGTTTCATCCATGCAGTTCAGG...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAGAACAGAATGACCCGTaGGTTGTGGAAAACATCCTC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQEQNDP*VVENIL
Trigger: GAGGATGTTTTCCACAACTCACGGGTCATTCTGTTC...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAATACAAGAATGGAGGGTaGGGAATGGTGCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQYKNGG*GMVLLC
Trigger: ACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTA...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCAGAAGTTCATCAAAGTaGTCTTGGGACGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGRSSSK*SWDGPS
Trigger: AGAGGGACCGTCCCAAGAGCACTTTGATGAACTTCT...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGGAGGGCTGTACATCCTaGAGAGTCTCATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQEGCTS*RVSFRK
Trigger: TTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTC...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGTGGGAGCGCCTCTCCTaGTCCTCAAAGAAAGCACTG +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWWERLS*SSKKAL
Trigger: CAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCA...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCCGTGTCAAGACATGGTaGTGGAGAATCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGRVKTW*WRIWLS
Trigger: AGACAACCAGATTCTCCAGCACCATGTCTTGACACG...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAGTGGAGCCAAAACTTaGCCCCCGGTTCACTTTGGC +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQISGAKT*PPVHFG
Trigger: GCCAAAGTGAACCGGGGGGCAAGTTTTGGCTCCACT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAGAGCCGAGTTCAAGGTaGCAAAAGAAACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSEPSSR*QKKQCG
Trigger: CCCACACTGTTTCTTTTGCCACCTTGAACTCGGCTC...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAAGCCTCTCTTGCCGTTaGTTAATCTGCCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSSLSCR*LICQAE
Trigger: TTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAATGGGTGGCAATCACATaGTCCAAAGTCGTCATGCTA +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQWVAIT*SKVVML
Trigger: TAGCATGACGACTTTGGACCATGTGATTGCCACCCA...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCCTCCATCCACCACATaGTTCTCCCCGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAPPSTT*FSPEEL
Trigger: GAGCTCCTCCGGGGAGAACCATGTGGTGGATGGAGG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCTGTTTCCTGATGAGGTaGAGATGTGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQICFLMR*RCAGPG
Trigger: CCCTGGGCCAGCACATCTCCACCTCATCAGGAAACA...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCATGTCCAGCAGGGCATaGTCAATGGTAGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGMSSRA*SMVGLS
Trigger: AGACAGCCCTACCATTGACCATGCCCTGCTGGACAT...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCTGGTGTCTTCAGAATaGGTGGTCCAGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGLVSSE*VVQLLS
Trigger: TGAGAGCAGCTGGACCACCCATTCTGAAGACACCAG...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGCAGGGTGCCCATTCATaGCTGGACTGCTGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVQGAHS*LDCWPA
Trigger: GGCAGGCCAGCAGTCCAGCCATGAATGGGCACCCTG...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACATTCAGGAAAGGGTTaGTTGCCCTCCAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSHSGKG*LPSKVK
Trigger: CTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGATGAGGGAATCTCTTTaGCTTTTGCCCGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQMRESL*LLPVVL
Trigger: CAGTACCACGGGCAAAAGCCAAAGAGATTCCCTCAT...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAATGAGGGAATCTCTTTaGCTTTTGCCCGTGGTACTG +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQMRESL*LLPVVL
Trigger: CAGTACCACGGGCAAAAGCCAAAGAGATTCCCTCAT...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCACCCGTCACGAGGCTaGGACCGTGCTGATCCAGGC +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIHPSRG*DRADPG
Trigger: GCCTGGATCAGCACGGTCCCAGCCTCGTGACGGGTG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGGATCCTCAACATCATTaGCCACCCGTCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWDPQHH*PPVTRL
Trigger: CAGCCTCGTGACGGGTGGCCAATGATGTTGAGGATC...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGGGCCACAGCAGGTTTaGGCTGGTATTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLGPQQV*AGISSS
Trigger: AGAAGAAGAAATACCAGCCCAAACCTGCTGTGGCCC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTGGTGCTGGAGAATCTaGTTGTCTCCTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGWCWRI*LSPLLT
Trigger: TGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCA...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAATGGTGCTGGAGAATCTaGTTGTCTCCTTTGCTCACA +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQWCWRI*LSPLLT
Trigger: TGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCA...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTCCCTCGCCGGGGTTCTaGCTCCTCTTGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTPSPGF*LLLGWG
Trigger: ACCCCAGCCCAAGAGGAGCCAGAACCCCGGCGAGGG...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGCTGGTCTGGGGAAGATaGCAGTCCTGGGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVLVWGR*QSWEVL
Trigger: GAGCACCTCCCAGGACTGTCATCTTCCCCAGACCAG...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTGGTTGCCCTCCAAGGTaGAGCCTCAGTTACAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPGCPPR*SLSYRR
Trigger: CCTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACC...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGTTGCACTGCCAAAGTaGTCAGGGTCATCAATTTGG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLVALPK*SGSSIW
Trigger: CCAAATTGATGACCCTGATCACTTTGGCAGTGCAAC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTAGGCTGGGACCGTGCTaGTCCAGGCGGGTGAGCATC +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTRLGPC*SRRVSI
Trigger: GATGCTCACCCGCCTGGATCAGCACGGTCCCAGCCT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGCAGTGTCTGTCAGTTTaGCGAAGATCGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELQCLSV*RRSVPS
Trigger: ACTGGGGACCGATCTTCGTCAAACTGACAGACACTG...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATTGAAGCCGGGGTTCTaGAATCTCATGACAGATCTC +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSLKPGF*NLMTDL
Trigger: GAGATCTGTCATGAGATTTCAGAACCCCGGCTTCAA...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGACACTGGCAGATCCATaGGACGGTCCTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWTLADP*DGPELH
Trigger: ATGCAGTTCAGGACCGTCTCATGGATCTGCCAGTGT...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGACACTGGCAGATCCATaGGACGGTCCTGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELTLADP*DGPELH
Trigger: ATGCAGTTCAGGACCGTCTCATGGATCTGCCAGTGT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATGGCGGAGAAGCCAGTTaGCATCCTCAGCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHGGEAS*HPQPAL
Trigger: CAGAGCTGGCTGAGGATGTCAACTGGCTTCTCCGCC...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGTCAGAGGAGTCATCCTaGTCCGAGTGGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELSEESS*SEWEWS
Trigger: AGACCATTCCCACTCGGAGCAGGATGACTCCTCTGA...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACAGCCTGGCCACTCGTCTaGTCCTCAGCATTGATGAGC +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTAWPLV*SSALMS
Trigger: GCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGC...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAATCTGGGATCACAGATaGACTTGGTGGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQIWDHR*TWWCIW
Trigger: CCAAATACACCACCAAGTGCATCTGTGATCCCAGAT...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCGTCTGCCTGCCTGTCTaGCACTCCGTCCTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAVCLPV*HSVLLS
Trigger: TGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGAC...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CCA 90 bp GGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTCTCCAAAAGCCAATCTCACGCTGGCTTTaGAGGCAGAAGTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GEPRALGMTRIKEPLQKPISRWL*RQKLWA
Trigger: TGCCCACAACTTCTGCCTCCAAAGCCAGCGTGAGAT...TGGCTTTTGGAGAGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGGTGGGCAGGAAAGGGTaGCTCTTCATTGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELVGRKG*LFIEGD
Trigger: GTCTCCTTCAATGAAGAGCCACCCTTTCCTGCCCAC...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGGTGGGCAGGAAAGGGTaGCTCTTCATTGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWVGRKG*LFIEGD
Trigger: GTCTCCTTCAATGAAGAGCCACCCTTTCCTGCCCAC...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTGGTGTCTTCAGAATaGGTGGTCCAGCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQILVSSE*VVQLLS
Trigger: TGAGAGCAGCTGGACCACCCATTCTGAAGACACCAG...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGACGAGCAGAGGTCACTaGAGGGGCAGGGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVTSRGH*RGRVPI
Trigger: AATGGGCACCCTGCCCCTCCAGTGACCTCTGCTCGT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCACAGATGCACTTGGTaGTGTATTTGGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLHRCTW*CIWLQR
Trigger: CCTCTGAAGCCAAATACACCACCAAGTGCATCTGTG...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGGATCACAGATGCACTTaGTGGTGTATTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQDHRCT*WCIWLQ
Trigger: CTGAAGCCAAATACACCACCAAGTGCATCTGTGATC...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCGTGGTACTGGAAATaGAACTGTTTTGGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWPWYWK*NCFGSA
Trigger: GGCGCTCCCAAAACAGTTCCATTTCCAGTACCACGG...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGCAGGAAGAGGATGCTaGAATTCCTTACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLAGRGC*NSLLCP
Trigger: TGGACAGAGTAAGGAATTCCAGCATCCTCTTCCTGC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACGTGAGTTGTTTTCCTaGCTGGGTGCATATTCTCTA +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSRELFS*LGAYSL
Trigger: TAGAGAATATGCACCCAGTCAGGAAAACAACTCACG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555447.5
CDS-3UTR TCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAGGGTGGCTCTTCATTaGAGGAGACCCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIRVALH*RRPILT
Trigger: AGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQTSSSS*SEEELS
Trigger: TGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGT...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTGCTGGCCTGCCAGCTaGTGGCCTCCATCTCTACTT +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHCWPAS*WPPSLL
Trigger: AAGTAGAGATGGAGGCCATCAGCTGGCAGGCCAGCA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGGCTTCAGAGGAGAGGTaGCTGGTGGTAAAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVASEER*LVVKGS
Trigger: GCTGCCCTTTACCACCAGTCACCTCTCCTCTGAAGC...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCGCTGATCCAGGCGGGTaGGCATCTAGTTCAATCCAG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAADPGG*ASSSIQ
Trigger: CTGGATTGAACTAGATGCTCACCCGCCTGGATCAGC...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCTCCATGAGACGGTCCTaGACTGCATGGATGAAACTC +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQISMRRS*TAWMKL
Trigger: GAGTTTCATCCATGCAGTTCAGGACCGTCTCATGGA...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGTCCATGAGACGGTCCTaGACTGCATGGATGAAACTC +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELSMRRS*TAWMKL
Trigger: GAGTTTCATCCATGCAGTTCAGGACCGTCTCATGGA...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCCAGAGTTACTCTCATaGCAGGCTCAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIPELLS*QAQSQK
Trigger: TTTCTGGCTCTGAGCCTGTCATGAGAGTAACTCTGG...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCAAGAAGCATTCCACCTaGTCTTCACCACCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGKKHST*SSPPSL
Trigger: CAAAGAGGGTGGTGAAGATCAGGTGGAATGCTTCTT...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCCATTGTTCTGATAGATaGTGCCAGTGGAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGHCSDR*CQWNFQ
Trigger: TTGGAAGTTCCACTGGCATCATCTATCAGAACAATG...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTGGGTTCATCCATCCTaGCGCACTGAAATTTATTAC +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGWVHPS*RTEIYY
Trigger: GTAATAAATTTCAGTGCGTCAGGATGGATGAACCCA...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGATGGAGTTGAAGGCATaGTCGTACTTGGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELMELKA*SYLAVP
Trigger: GGGAACTGCCAAGTACGAGCATGCCTTCAACTCCAT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCTGGTAGCTGTAGTGTaGAGAATAATTGACCCACTT +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQLVAVV*RIIDPL
Trigger: AAGTGGGTCAATTATTCTGCACACTACAGCTACCAG...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GCAGTGGCCACAGCAGGTATTGACTGCAACTTCAGCTACTCAGGAAGACACCCTCAAACCACATACCAGTaGTGTGAGATAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: AVATAGIDCNFSYSGRHPQTTYQ*CEISRD
Trigger: GTCTCTGCTTATCTCACAGCACTGGTATGTGGTTTG...AGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTGTAACCACTTCGCCCTaGTCCATCCACGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPVTTSP*SIHEMY
Trigger: GTACATCTCGTGGATGGAGCAGGGCGAAGTGGTTAC...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCCAGGTGGGGAAGCTaGTTCAGAGATGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHPRWGS*FRDEAH
Trigger: ATGGGCCTCATCTCTGAAGCAGCTTCCCCACCTGGG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTACTGGAGGGGCAGGGTaGCCATTCATGGCTGGACTG +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSTGGAG*PFMAGL
Trigger: CAGTCCAGCCATGAATGGGCACCCTGCCCCTCCAGT...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAAGATCGGTCCCCAGTaGCTGGAGGACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIKIGPQ*LEDMMF
Trigger: AAACATCATGTCCTCCAGGCACTGGGGACCGATCTT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTGCCCAGGCGGCACTCTaGGAGCCCAGACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTAQAAL*EPRQET
Trigger: AGTTTCCTGTCTGGGCTCGCAGAGTGCCGCCTGGGC...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAGTGGGCATGATGTCCTaGCTCAAAACTATTTCATTC +
Preference number: 4 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQVGMMS*LKTISF
Trigger: GAATGAAATAGTTTTGAGGCAGGACATCATGCCCAC...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCAGGACACTTTCCCTaGGGAAGTTTTTCACCCACT +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWPGHFP*GSFSPT
Trigger: AGTGGGTGAAAAACTTCCGCAGGGAAAGTGTCCTGG...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCACGACATTCACGTGATTaGCAAATCTGGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSRHSRD*QIWKAL
Trigger: AAGTGCCTTCCAGATTTGCCAATCACGTGAATGTCG...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTATCTCACGCTGGCTTTaGAGGCAGAAGTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPISRWL*RQKLWA
Trigger: TGCCCACAACTTCTGCCTCCAAAGCCAGCGTGAGAT...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGAGCCTCTCTTGCCGTTaGTTAATCTGCCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELSLSCR*LICQAE
Trigger: TTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTACGAGCAGAGGTCACTaGAGGGGCAGGGTGCCCATT +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTITSRGH*RGRVPI
Trigger: AATGGGCACCCTGCCCCTCCAGTGACCTCTGCTCGT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGGCATCAGAGTGTGACTaGGTTTTGCTTGAATCATCA +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQASECD*VLLESS
Trigger: TGATGATTCAAGCAAAACCCAGTCACACTCTGATGC...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCGATCCTCAACATCATTaGCCACCCGTCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIADPQHH*PPVTRL
Trigger: CAGCCTCGTGACGGGTGGCCAATGATGTTGAGGATC...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCATCCGTGTCAAGACATaGTGCTGGAGAATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGIRVKT*CWRIWL
Trigger: CAACCAGATTCTCCAGCACCATGTCTTGACACGGAT...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAATGACCCGTGAGTTGTaGAAAACATCCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSMTREL*KTSSST
Trigger: TGTGGATGAGGATGTTTTCCACAACTCACGGGTCAT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAATCATCCCCAGTACTTaGAGGGTTAGACCTACTTCT +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSIIPST*RVRPTS
Trigger: AGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGAT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGAGGAGGAATTGTCATTaGGAGCAGAGGCCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVRRNCH*EQRPPP
Trigger: CGGAGGGGGCCTCTGCTCCCAATGACAATTCCTCCT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR TCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCGTGGTAAAGGGCAGCTaGCTTCATTGTCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIVVKGS*LHCHQR
Trigger: CCTTTGATGACAATGAAGTCAGCTGCCCTTTACCAC...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCATTGTTCTGATAGATaGTGCCAGTGGAACTTCCAA +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLHCSDR*CQWNFQ
Trigger: TTGGAAGTTCCACTGGCATCATCTATCAGAACAATG...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTACCACTGGGGTTGCTaGTCCAAAGCACATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVYHWGC*SKAHGG
Trigger: GCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGTA...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGTACAAGAATGGAGGGTaGGGAATGGTGCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELYKNGG*GMVLLC
Trigger: ACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTA...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGGATGAGGTGGAGATGTaGTGGCCCAGGGTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVDEVEM*WPRVCH
Trigger: ATGACACACCCTGGGCCAGCACATCTCCACCTCATC...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGTCAGCATTGATGAGCTaGAGATCTGTATACGAACAT +
Preference number: 4 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQSALMS*RSVYEH
Trigger: ATGTTCGTATACAGATCTGCAGCTCATCAATGCTGA...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGGAGGGCTGTACATCCTaGAGAGTCTCATTCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWEGCTS*RVSFRK
Trigger: TTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTC...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCTGCACCTCCACCTCTaGCCCATTGACACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTILHLHL*PIDTCG
Trigger: GCCACAAGTGTCAATGGGGCAGAGGTGGAGGTGCAG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCGAGGGTGAGGAATGGTaGTTCTCTGTCATCGCCTGG +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIEGEEW*FSVIAW
Trigger: CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTC...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCGTGATTGGCAAATCTaGAAGGCACTTCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIARDWQI*KALPGQ
Trigger: CTGACCGGGAAGTGCCTTCCAGATTTGCCAATCACG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACACAAACCCAGGCAGTCTaGCTCCAGAGTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTQTQAV*LQSLYL
Trigger: CAAGTACAGACTCTGGAGCCAGACTGCCTGGGTTTG...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCCCTCCATCCACCACATaGTTCTCCCCGGAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIPPSTT*FSPEEL
Trigger: GAGCTCCTCCGGGGAGAACCATGTGGTGGATGGAGG...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGGAGGTGGAGATGTGCTaGCCCAGGGTGTGTCATCTT +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVEVEMC*PRVCHL
Trigger: AAGATGACACACCCTGGGCCAGCACATCTCCACCTC...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTGTTTCCTGATGAGGTaGAGATGTGCTGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHCFLMR*RCAGPG
Trigger: CCCTGGGCCAGCACATCTCCACCTCATCAGGAAACA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTGTCTTCAGAATGGGTaGTCCAGCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPCLQNG*SSCSQK
Trigger: CTTCTGAGAGCAGCTGGACCACCCATTCTGAAGACA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGACTTGGTGGTGTATTTaGCTTCAGAGGAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWTWWCI*LQRRGD
Trigger: GTCACCTCTCCTCTGAAGCCAAATACACCACCAAGT...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTCATCCACACACCCATaGAAACGGCACTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIASSTHP*KRHSWS
Trigger: GCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGA...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CAA 72 bp TATACTGTTCCCAACATGCAGTGGCCACAGCAGGTATaGACTGCAACTTCAGCTACTCAGGAAGACACCCTA +
Preference number: 4 (lower is better)
Translates to: YTVPNMQWPQQV*TATSATQEDTL
Trigger: TAGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGCATGTTGGGAACAGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGACTGCTGACCTCAGGTaGACCCCAGAATACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVTADLR*TPEYCL
Trigger: CAGACAGTATTCTGGGGTTCACCTGAGGTCAGCAGT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTGCTGGCCTGCCAGCTaGTGGCCTCCATCTCTACTT +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTCWPAS*WPPSLL
Trigger: AAGTAGAGATGGAGGCCATCAGCTGGCAGGCCAGCA...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCATTGTCATCAAAGGTaGCCCAGCTGGGAAAACGAG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAHCHQR*PSWENE
Trigger: CTCGTTTTCCCAGCTGGGTCACCTTTGATGACAATG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTGTGGTAAAGGGCAGCTaGCTTCATTGTCATCAAAGG +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPVVKGS*LHCHQR
Trigger: CCTTTGATGACAATGAAGTCAGCTGCCCTTTACCAC...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCAGTGTCTGTCAGTTTaGCGAAGATCGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHQCLSV*RRSVPS
Trigger: ACTGGGGACCGATCTTCGTCAAACTGACAGACACTG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCGGTTCTGAAATCTCATaGCAGATCTCCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIGSEIS*QISSLN
Trigger: GTTCAAGCTGGAGATCTGTCATGAGATTTCAGAACC...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTTGAAGCCGGGGTTCTaGAATCTCATGACAGATCTC +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPLKPGF*NLMTDL
Trigger: GAGATCTGTCATGAGATTTCAGAACCCCGGCTTCAA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCAGCAAACACTGTCCTaGACCGCATTAGCTCAAACC +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAQQTLS*TALAQT
Trigger: GGTTTGAGCTAATGCGGTTCAGGACAGTGTTTGCTG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCCAGAGTTACTCTCATaGCAGGCTCAGAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAPELLS*QAQSQK
Trigger: TTTCTGGCTCTGAGCCTGTCATGAGAGTAACTCTGG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTGCTCCGAGCATGCTTaGACAGGACTCACTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDICSEHA*TGLTAV
Trigger: GACGGCAGTGAGTCCTGTTCAAGCATGCTCGGAGCA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR GCA 90 bp CTCCAACAGTCAGGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTAAATCCAATGAAGTGTaGTTTCTGTCCCCCGACTTG +
Preference number: 4 (lower is better)
Translates to: LQQSGEPRALGMTRIKEPKSNEV*FLSPDL
Trigger: CAAGTCGGGGGACAGAAAGCACACTTCATTGGATTT...AGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACACAGATCAGCCTCTCTTaGCGTTGGTTAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTQISLS*RWLICQ
Trigger: CTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTG...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGAATCTCTTTGGCTTTTaGCCGTGGTACTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELNLFGF*PWYWKW
Trigger: CCATTTCCAGTACCACGGGCAAAAGCCAAAGAGATT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCTCTGGTTGTCTCCTTTaGTCACAATGCCAGAGAATT +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGSGCLL*SQCQRI
Trigger: AATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGA...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCCAGGACACTTTCCCTaGGGAAGTTTTTCACCCACT +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAPGHFP*GSFSPT
Trigger: AGTGGGTGAAAAACTTCCGCAGGGAAAGTGTCCTGG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGTGTGGAAGGCAACTaGAATATAGAGGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSCVEGN*NIEDLE
Trigger: TTCCAAATCCTCTATATTGCAGTTGCCTTCCACACA...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCGTCTGTGCCTCTTCATaGTCACACCATTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIVCASS*SHHCSD
Trigger: ATCAGAACAATGGTGTGAGCATGAAGAGGCACAGAC...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTGAGGGTGAGGAATGGTaGTTCTCTGTCATCGCCTGG +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIEGEEW*FSVIAW
Trigger: CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTC...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTTTGAACAGGACTCACTaGCGTCTGCCTGCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSLNRTH*RLPACL
Trigger: CAGACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAA...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCGTGATTGGCAAATCTaGAAGGCACTTCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHRDWQI*KALPGQ
Trigger: CTGACCGGGAAGTGCCTTCCAGATTTGCCAATCACG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGGAAATGGAACTGTTTTaGGAGCGCCTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVEMELF*ERLSCS
Trigger: GGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTC...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCGTGGTACTGGAAATaGAACTGTTTTGGGAGCGCC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHPWYWK*NCFGSA
Trigger: GGCGCTCCCAAAACAGTTCCATTTCCAGTACCACGG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCTTTGGCTTTTGCCCGTaGTACTGGAAATGGAACTGT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIFGFCP*YWKWNC
Trigger: ACAGTTCCATTTCCAGTACCACGGGCAAAAGCCAAA...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCAAGAAACAGTGTGGGTaGCCGGAAGCTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAKKQCG*PEAEFL
Trigger: CAAAAACTCAGCTTCCGGTCACCCACACTGTTTCTT...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACAAAGTTGTGGGCATGCTaGACTCGACATTCACGTGAT +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTKLWAC*TRHSRD
Trigger: ATCACGTGAATGTCGAGTTCAGCATGCCCACAACTT...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CATCAGAAGGCAATCGTGCTAACACTGATGTGGGAGGTTCTTTTCCTGACTGTACACATACCAGTGCTGTaGGATAAGCAGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: HQKAIVLTLMWEVLFLTVHIPVL*DKQRQD
Trigger: GTCTTGTCTCTGCTTATCTCACAGCACTGGTATGTG...TACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CTCCAACAGTCAGGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTAGAAAGTTATGCGAGTaGCAGATGAACATCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LQQSGEPRALGMTRIKEPRKLCE*QMNIRR
Trigger: CCTTCTGATGTTCATCTGTCACTCGCATAACTTTCT...AGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTCATCTTCACACTGCTaGCCTCAGGTGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTISSSHC*PQVNPR
Trigger: TCTGGGGTTCACCTGAGGTCAGCAGTGTGAAGATGA...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGAGGGTGGCTCTTCATTaGAGGAGACCCATTCTGACT +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVRVALH*RRPILT
Trigger: AGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCGTGTCATCTTCAAACTaGACCCAGTTGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIVSSSN*TQLLMA
Trigger: GGCCATCAGCAACTGGGTTCAGTTTGAAGATGACAC...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCATTGTCATCAAAGGTaGCCCAGCTGGGAAAACGAG +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIHCHQR*PSWENE
Trigger: CTCGTTTTCCCAGCTGGGTCACCTTTGATGACAATG...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAATTTGGAGTTGTTTaGGTTTTTCAACAGCATCAG +
Preference number: 4 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLQFGVV*VFQQHQ
Trigger: CTGATGCTGTTGAAAAACTCAAACAACTCCAAATTG...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACAAGTGCCTGGAGGACATaGTGTTTTTCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTSAWRT*CFSSQG
Trigger: TCCCTGAGAAGAAAAACATCATGTCCTCCAGGCACT...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTTGGTGGTGGTGGGCATaGTGTCCTGCCTCAAAACTA +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSWWWWA*CPASKL
Trigger: TAGTTTTGAGGCAGGACATCATGCCCACCACCACCA...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCAGCAAACACTGTCCTaGACCGCATTAGCTCAAACC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHQQTLS*TALAQT
Trigger: GGTTTGAGCTAATGCGGTTCAGGACAGTGTTTGCTG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTTCTCACAGGGAACCTaGGTGAGGGGGTCACGATTG +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTFSQGT*VRGSRL
Trigger: CAATCGTGACCCCCTCACTCAGGTTCCCTGTGAGAA...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCTCAATCCAACACATCTaGCTACCACAAATACAACCA +
Preference number: 4 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGSIQHI*LPQIQP
Trigger: TGGTTGTATTTGTGGTAGTCAGATGTGTTGGATTGA...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTACCACTGGGGTTGCTaGTCCAAAGCACATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIYHWGC*SKAHGG
Trigger: GCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGTA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CTCCAACAGTCAGGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTCTGGTAGCTGTAGTGTaGAGAATAATTGACCCACTT +
Preference number: 4 (lower is better)
Translates to: LQQSGEPRALGMTRIKEPLVAVV*RIIDPL
Trigger: AAGTGGGTCAATTATTCTGCACACTACAGCTACCAG...AGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp CTCAGGATAGCAAATCCTGTGACTGAAACCTTAGAGAGATGGAAAAAGTGTTCCGCAAGGCTTTGTCACTaGACTCCACACTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LRIANPVTETLERWKKCSARLCH*TPHSLG
Trigger: TCCCAAGGAGTGTGGAGTGCAGTGACAAAGCCTTGC...GGAACACTTTTTCCATCTCTCTAAGGTTTCAGTCACAGGATTTGCTATCCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCAGATCAGCCTCTCTTaGCGTTGGTTAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHQISLS*RWLICQ
Trigger: CTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACACAGGTAGAGTTGCACTaGCAAAGTGATCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTQVELH*QSDQGH
Trigger: ATGACCCTGATCACTTTGGCAGTGCAACTCTACCTG...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTCTCTCATCTGGTTTTaGCATAACTTACAAATAGTC +
Preference number: 4 (lower is better)
Translates to: SKAHGGATVLKASVMVWGSLIWF*HNLQIV
Trigger: GACTATTTGTAAGTTATGGCAAAACCAGATGAGAGA...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGGAGCCGAGTTCAAGGTaGCAAAAGAAACAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEEPSSR*QKKQCG
Trigger: CCCACACTGTTTCTTTTGCCACCTTGAACTCGGCTC...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTACCCATTCTGACTGGTaGGTGGCAATCACATGGTCC +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTITHSDW*VAITWS
Trigger: GGACCATGTGATTGCCACCCACCAGTCAGAATGGGT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCTGTCTTCAGAATGGGTaGTCCAGCTGCTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHICLQNG*SSCSQK
Trigger: CTTCTGAGAGCAGCTGGACCACCCATTCTGAAGACA...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCATTCAGGAAAGGGTTaGTTGCCCTCCAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIHSGKG*LPSKVK
Trigger: CTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATG...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGGCATCAGAGTGTGACTaGGTTTTGCTTGAATCATCA +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWASECD*VLLESS
Trigger: TGATGATTCAAGCAAAACCCAGTCACACTCTGATGC...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCTATCCGCAAGCTGTaGATTCTGCCATTCTCATCA +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSIRKL*ILPFSS
Trigger: TGATGAGAATGGCAGAATCCACAGCTTGCGGATAGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCGGGCCACAGCAGGTTTaGGCTGGTATTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIGPQQV*AGISSS
Trigger: AGAAGAAGAAATACCAGCCCAAACCTGCTGTGGCCC...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCAGGAAACTCAGGATGTaGATCCGTGTCAAGACATGG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIARKLRM*IRVKTW
Trigger: CCATGTCTTGACACGGATCCACATCCTGAGTTTCCT...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTTTTCACCCACTCACTaGGCACAGGGTAACGGATCA +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVFSPTH*AQGNGS
Trigger: TGATCCGTTACCCTGTGCCCAGTGAGTGGGTGAAAA...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCAACAATTTGCTGTTaGGACCTGACTATACATCTG +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWPTICC*DLTIHL
Trigger: CAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGG...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTCAGACATTACAAGAATaGAGGGTGAGGAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPQTLQE*RVRNGA
Trigger: AGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCAAGTTGTGGGCATGCTaGACTCGACATTCACGTGAT +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIKLWAC*TRHSRD
Trigger: ATCACGTGAATGTCGAGTTCAGCATGCCCACAACTT...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTCATCTTCACACTGCTaGCCTCAGGTGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVISSSHC*PQVNPR
Trigger: TCTGGGGTTCACCTGAGGTCAGCAGTGTGAAGATGA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTGTGTCATCTTCAAACTaGACCCAGTTGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSVSSSN*TQLLMA
Trigger: GGCCATCAGCAACTGGGTTCAGTTTGAAGATGACAC...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGGAAATATCCAGCTTCTaGACTTTGGAGAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELEISSF*TLEKFI
Trigger: GATGAACTTCTCCAAAGTTCAGAAGCTGGATATTTC...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGAGTGCCTGGAGGACATaGTGTTTTTCTTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVSAWRT*CFSSQG
Trigger: TCCCTGAGAAGAAAAACATCATGTCCTCCAGGCACT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCTGAACTGCATGGATaGAACTCAGGAAGTCATCGT +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHPELHG*NSGSHR
Trigger: ACGATGACTTCCTGAGTTTCATCCATGCAGTTCAGG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCTGTGCTCAAGTCCATTaGCAACACTGGCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHICAQVH*QHWQIH
Trigger: ATGGATCTGCCAGTGTTGTCAATGGACTTGAGCACA...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTCCTCTTCAAGGTAGTTaGGGCCAACTGTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSPLQGS*GQLCSS
Trigger: ACTTGAGCACAGTTGGCCTCAACTACCTTGAAGAGG...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATGAACAGAATGACCCGTaGGTTGTGGAAAACATCCTC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHEQNDP*VVENIL
Trigger: GAGGATGTTTTCCACAACTCACGGGTCATTCTGTTC...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGAAGAAGCATTCCACCTaGTCTTCACCACCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVKKHST*SSPPSL
Trigger: CAAAGAGGGTGGTGAAGATCAGGTGGAATGCTTCTT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCCCAGGATGTTTACTaGGTGTCCTCCTTCAATTTT +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSQDVY*VSSFNF
Trigger: AAAATTGAAGGAGGACACTCAGTAAACATCCTGGGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTTTGCTGTTGGGACCTaGCTATACATCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHFAVGT*LYICFP
Trigger: GGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCAAGGCTTGGAACAGCTaGATCATTCACTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAKAWNS*IIHWIL
Trigger: CAAGATCCAGTGAATGATTCAGCTGTTCCAAGCCTT...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGTGCAAGAGGTTACACTaGATGAGAATGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELCKRLH*MRMDDE
Trigger: TTCATCATCCATTCTCATTCAGTGTAACCTCTTGCA...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTGTAACCACTTCGCCCTaGTCCATCCACGAGATGTAC +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIVTTSP*SIHEMY
Trigger: GTACATCTCGTGGATGGAGCAGGGCGAAGTGGTTAC...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTCAGAGGAGTCATCCTaGTCCGAGTGGGAATGGTCT +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVISEESS*SEWEWS
Trigger: AGACCATTCCCACTCGGAGCAGGATGACTCCTCTGA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGTCAGCATTGATGAGCTaGAGATCTGTATACGAACAT +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWSALMS*RSVYEH
Trigger: ATGTTCGTATACAGATCTGCAGCTCATCAATGCTGA...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATAGAAGTTCATCAAAGTaGTCTTGGGACGGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHRSSSK*SWDGPS
Trigger: AGAGGGACCGTCCCAAGAGCACTTTGATGAACTTCT...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGTGTGTGGAAGGCAACTaGAATATAGAGGATTTGGAA +
Preference number: 4 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWCVEGN*NIEDLE
Trigger: TTCCAAATCCTCTATATTGCAGTTGCCTTCCACACA...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACAGTCTGTGCCTCTTCATaGTCACACCATTGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTVCASS*SHHCSD
Trigger: ATCAGAACAATGGTGTGAGCATGAAGAGGCACAGAC...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCACACCCAACAATTTaGTGTTGGGACCTGACTATA +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSHPTI*CWDLTI
Trigger: TATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTGGTATGCTCCGAGCATaGTTGAACAGGACTCACTGC +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTGMLRA*LNRTHC
Trigger: GCAGTGAGTCCTGTTCAAGCATGCTCGGAGCATACC...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTATCTCACGCTGGCTTTaGAGGCAGAAGTTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIISRWL*RQKLWA
Trigger: TGCCCACAACTTCTGCCTCCAAAGCCAGCGTGAGAT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTGGGTGGCAATCACATaGTCCAAAGTCGTCATGCTA +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHWVAIT*SKVVML
Trigger: TAGCATGACGACTTTGGACCATGTGATTGCCACCCA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATATTCTGACTGGTGGGTaGCAATCACATGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHILTGG*QSHGPK
Trigger: CTTTGGACCATGTGATTGCCACCCACCAGTCAGAAT...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTATGTCCAGCAGGGCATaGTCAATGGTAGGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTMSSRA*SMVGLS
Trigger: AGACAGCCCTACCATTGACCATGCCCTGCTGGACAT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATACTTGGTGGTGTATTTaGCTTCAGAGGAGAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHTWWCI*LQRRGD
Trigger: GTCACCTCTCCTCTGAAGCCAAATACACCACCAAGT...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGCACAGATGCACTTGGTaGTGTATTTGGCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVHRCTW*CIWLQR
Trigger: CCTCTGAAGCCAAATACACCACCAAGTGCATCTGTG...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTGAAATGGAACTGTTTTaGGAGCGCCTCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIEMELF*ERLSCS
Trigger: GGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTC...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGACAGCAGGTTTGGGCTaGTATTTCTTCTTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: CLRLQSWCGARQHPQLELTAGLG*YFFFSL
Trigger: TAAAGAGAAGAAGAAATACCAGCCCAAACCTGCTGT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTGGAAACGGCACTCATaGAGCTTGATCCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVWKRHS*SLIHFV
Trigger: CACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCA...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCATGACCCGTGAGTTGTaGAAAACATCCTCATCCACA +
Preference number: 4 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAMTREL*KTSSST
Trigger: TGTGGATGAGGATGTTTTCCACAACTCACGGGTCAT...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTTAAGGCTTCAGTCATaGTGTGGGGCTAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHLRLQS*CGARQH
Trigger: ATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTGAAATATCCAGCTTCTaGACTTTGGAGAAGTTCATC +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPEISSF*TLEKFI
Trigger: GATGAACTTCTCCAAAGTTCAGAAGCTGGATATTTC...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATGGTTCTGAAATCTCATaGCAGATCTCCAGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHGSEIS*QISSLN
Trigger: GTTCAAGCTGGAGATCTGTCATGAGATTTCAGAACC...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTTGTGCTCAAGTCCATTaGCAACACTGGCAGATCCAT +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSCAQVH*QHWQIH
Trigger: ATGGATCTGCCAGTGTTGTCAATGGACTTGAGCACA...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTTTGCTGTTGGGACCTaGCTATACATCTGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIFAVGT*LYICFP
Trigger: GGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAA...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAGAGGTTACACTGAATaGGAATGGATGATGAATGAT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIRGYTE*EWMMND
Trigger: ATCATTCATCATCCATTCTCATTCAGTGTAACCTCT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp AGATGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAGGGATCAGGATTCCTTaGCGCAAGGCTTTGTCACTG +
Preference number: 4 (lower is better)
Translates to: RWSERSDSWNQNIMFPTLGIRIP*RKALSL
Trigger: CAGTGACAAAGCCTTGCGGCAAGGAATCCTGATCCC...TAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATATCTGGGATCACAGATaGACTTGGTGGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHIWDHR*TWWCIW
Trigger: CCAAATACACCACCAAGTGCATCTGTGATCCCAGAT...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCAAGATCGGTCCCCAGTaGCTGGAGGACATGATGTTT +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIKIGPQ*LEDMMF
Trigger: AAACATCATGTCCTCCAGGCACTGGGGACCGATCTT...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTATGGAGGCGCAACAGTaGTTAAGGCTTCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTMEAQQ*LRLQSW
Trigger: CCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCAT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTAGGCATGCTCGTACTTaGCAGTTCCCAGAGTTACTC +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTRHART*QFPELL
Trigger: GAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTAGGCATGCTCGTACTTaGCAGTTCCCAGAGTTACTC +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIRHART*QFPELL
Trigger: GAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAGTGGCGTGATTGGCAAATCTaGAAGGCACTTCCCGGTCAG +
Preference number: 4 (lower is better)
Translates to: PLTNASGIMYICFRNQKWRDWQI*KALPGQ
Trigger: CTGACCGGGAAGTGCCTTCCAGATTTGCCAATCACG...CCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGGCACTCCACACTCCTTaGGATTTTCCATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEALHTP*DFPFHL
Trigger: GAGATGAAATGGAAAATCCCAAGGAGTGTGGAGTGC...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTATTCTGACTGGTGGGTaGCAATCACATGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIILTGG*QSHGPK
Trigger: CTTTGGACCATGTGATTGCCACCCACCAGTCAGAAT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTGTCAAGACATGGTGCTaGAGAATCTGGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIVKTWC*RIWLSP
Trigger: AGGAGACAACCAGATTCTCCAGCACCATGTCTTGAC...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTATCCGTGTCAAGACATaGTGCTGGAGAATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIIRVKT*CWRIWL
Trigger: CAACCAGATTCTCCAGCACCATGTCTTGACACGGAT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTAGGAAACTCAGGATGTaGATCCGTGTCAAGACATGG +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIRKLRM*IRVKTW
Trigger: CCATGTCTTGACACGGATCCACATCCTGAGTTTCCT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTTTTCACCCACTCACTaGGCACAGGGTAACGGATCA +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIFSPTH*AQGNGS
Trigger: TGATCCGTTACCCTGTGCCCAGTGAGTGGGTGAAAA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAAGTTAAATGAATGCTaGCTTAAGGTCAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIKLNEC*LKVRGV
Trigger: AACTCCTCTGACCTTAAGCCAGCATTCATTTAACTT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp GGATTCTTAATTAACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACAAGAAACAGTGTGGGTaGCCGGAAGCTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GFLINFSRLPLPESYASDKKQCG*PEAEFL
Trigger: CAAAAACTCAGCTTCCGGTCACCCACACTGTTTCTT...GTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAATTAAGAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTAAGAAACAGTGTGGGTaGCCGGAAGCTGAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIKKQCG*PEAEFL
Trigger: CAAAAACTCAGCTTCCGGTCACCCACACTGTTTCTT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCAACTCGACATTCACGTaGTTGGCAAATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVINSTFT*LANLEG
Trigger: GCCTTCCAGATTTGCCAATCACGTGAATGTCGAGTT...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTGTTGCACTGCCAAAGTaGTCAGGGTCATCAATTTGG +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIVALPK*SGSSIW
Trigger: CCAAATTGATGACCCTGATCACTTTGGCAGTGCAAC...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTGACAGATCTCCAGCTTaGACTCACGGAATGGTTTTT +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSDRSPA*THGMVF
Trigger: AAAAACCATTCCGTGAGTTCAAGCTGGAGATCTGTC...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTCTTCTCTTTATAGGTaGCACGGTCTATCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVISSLYR*HGLSAS
Trigger: GCTTGCGGATAGACCGTGTCACCTATAAAGAGAAGA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCCATCCTGACGCACTaGAATTTATTACAGACATTA +
Preference number: 4 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSILTH*NLLQTL
Trigger: TAATGTCTGTAATAAATTTCAGTGCGTCAGGATGGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GTGCTAACACTGATGTGGGAGGTTCTTTTCCTGACTGTAACAGTCACAACAAACAAAAGAACTCCCAAATaGCCCTTACAAATGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLTLMWEVLFLTVTVTTNKRTPK*PLQMPQ
Trigger: CTGAGGCATTTGTAAGGGGCATTTGGGAGTTCTTTT...GTTTGTTGTGACTGTTACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACACAGTTACAGAAGGCGTaGGGTTTAAAGAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: STWRVRPTSVSGSTQILTQLQKA*GLKRKY
Trigger: ATATTTCCTCTTTAAACCGCACGCCTTCTGTAACTG...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTCAGGTAGAGTTGCACTaGCAAAGTGATCAGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIQVELH*QSDQGH
Trigger: ATGACCCTGATCACTTTGGCAGTGCAACTCTACCTG...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCTCTGGTTGTCTCCTTTaGTCACAATGCCAGAGAATT +
Preference number: 4 (lower is better)
Translates to: EEDAGIPYSVQLESIQHISGCLL*SQCQRI
Trigger: AATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGA...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCCGTGTCAAGACATGGTaGTGGAGAATCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIRVKTW*WRIWLS
Trigger: AGACAACCAGATTCTCCAGCACCATGTCTTGACACG...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATGTGGGCATGATGTCCTaGCTCAAAACTATTTCATTC +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHVGMMS*LKTISF
Trigger: GAATGAAATAGTTTTGAGGCAGGACATCATGCCCAC...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTCGACATTCACGTGATTaGCAAATCTGGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSRHSRD*QIWKAL
Trigger: AAGTGCCTTCCAGATTTGCCAATCACGTGAATGTCG...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTGTCAAGACATGGTGCTaGAGAATCTGGTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTVKTWC*RIWLSP
Trigger: AGGAGACAACCAGATTCTCCAGCACCATGTCTTGAC...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTGGAAACGGCACTCATaGAGCTTGATCCACTTTGTG +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIWKRHS*SLIHFV
Trigger: CACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTGCAGGAAGAGGATGCTaGAATTCCTTACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTAGRGC*NSLLCP
Trigger: TGGACAGAGTAAGGAATTCCAGCATCCTCTTCCTGC...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTTAAGGCTTCAGTCATaGTGTGGGGCTAGACAGCAT +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDILRLQS*CGARQH
Trigger: ATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCAGACATTACAAGAATaGAGGGTGAGGAATGGTGCT +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTIQTLQE*RVRNGA
Trigger: AGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
3UTR CAA 72 bp CTATACTTTAGAACTCTCACACCCAACAATTTGCTGTaGGGACCTGACTATACATCTGCTTTCCCACAATGC +
Preference number: 4 (lower is better)
Translates to: LYFRTLTPNNLL*GPDYTSAFPQC
Trigger: GCATTGTGGGAAAGCAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp AGATGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAAACTCGACATTCACGTaGTTGGCAAATCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RWSERSDSWNQNIMFPTLNSTFT*LANLEG
Trigger: GCCTTCCAGATTTGCCAATCACGTGAATGTCGAGTT...TAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAGTGGAAGTTGTGGGCATGCTaGACTCGACATTCACGTGAT +
Preference number: 4 (lower is better)
Translates to: PLTNASGIMYICFRNQKWKLWAC*TRHSRD
Trigger: ATCACGTGAATGTCGAGTTCAGCATGCCCACAACTT...CCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CAGTTAAAGAATGGAGACACCTCAAAAAGGTCTAGTAAGACCCAAAGAGGAAATGAAGACACCCTATCATaGCTCAGGAAGACACCCTAT +
Preference number: 4 (lower is better)
Translates to: QLKNGDTSKRSSKTQRGNEDTLS*LRKTPY
Trigger: ATAGGGTGTCTTCCTGAGTCATGATAGGGTGTCTTC...ATTTCCTCTTTGGGTCTTACTAGACCTTTTTGAGGTGTCTCCATTCTTTAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp AGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAGAAAAAGGCCACAGCAGGTATTaGCTGCAACTTCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: SERSDSWNQNIMFPTLEKGHSRY*LQLQLL
Trigger: GAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCC...TTTTTCTAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTAAGGCTTGGAACAGCTaGATCATTCACTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTKAWNS*IIHWIL
Trigger: CAAGATCCAGTGAATGATTCAGCTGTTCCAAGCCTT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp CCAGGAGGGAAATGTCTTGAAAGCTTAACAGTTAAAGAATGGAGACACCTCAAAACAGCAGGTATTGACTaGAACTTCAGCTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGGKCLESLTVKEWRHLKTAGID*NFSYSG
Trigger: TCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGT...TTTGAGGTGTCTCCATTCTTTAACTGTTAAGCTTTCAAGACATTTCCCTCCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp AGATGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAATACTGTTCCCAACATaGAGTGGCCACAGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: RWSERSDSWNQNIMFPTLILFPT*SGHSRY
Trigger: ATACCTGCTGTGGCCACTGCATGTTGGGAACAGTAT...TAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGTTTTCCTGACTGGGTaGATATTCTCTACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIVFLTG*IFSTLF
Trigger: GAAGAGGGTAGAGAATATGCACCCAGTCAGGAAAAC...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555447.5
CDS-3UTR GCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGCAGTTACAGAAGGCGTaGGGTTTAAAGAGGAAATAT +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVQLQKA*GLKRKY
Trigger: ATATTTCCTCTTTAAACCGCACGCCTTCTGTAACTG...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTAATCTCTTTGGCTTTTaGCCGTGGTACTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTNLFGF*PWYWKW
Trigger: CCATTTCCAGTACCACGGGCAAAAGCCAAAGAGATT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp CTCAGGATAGCAAATCCTGTGACTGAAACCTTAGAGAGATGGAAAAAGTGTTCCGCAAACAGGAAGATCTaGTATACTGTTCCCAACATG +
Preference number: 4 (lower is better)
Translates to: LRIANPVTETLERWKKCSANRKI*YTVPNM
Trigger: CATGTTGGGAACAGTATACCAGATCTTCCTGTTTGC...GGAACACTTTTTCCATCTCTCTAAGGTTTCAGTCACAGGATTTGCTATCCTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCTCTTCACAGGAAAATaGCAACCAAATGACAGGAGA +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTILFTGK*QPNDRR
Trigger: TCTCCTGTCATTTGGTTGCCATTTTCCTGTGAAGAG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555447.5
CDS-3UTR CCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGATCACAGATGCACTTaGTGGTGTATTTGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIDHRCT*WCIWLQ
Trigger: CTGAAGCCAAATACACCACCAAGTGCATCTGTGATC...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTTTGGCTTTTGCCCGTaGTACTGGAAATGGAACTGT +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIFGFCP*YWKWNC
Trigger: ACAGTTCCATTTCCAGTACCACGGGCAAAAGCCAAA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTCTATCCGCAAGCTGTaGATTCTGCCATTCTCATCA +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDISIRKL*ILPFSS
Trigger: TGATGAGAATGGCAGAATCCACAGCTTGCGGATAGA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTATCATCCCCAGTACTTaGAGGGTTAGACCTACTTCT +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIIIPST*RVRPTS
Trigger: AGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGAT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGGTGAGTAGGAACGGATaGAGGAAAAGAAGATTAATT +
Preference number: 4 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEVSRNG*RKRRLI
Trigger: AATTAATCTTCTTTTCCTTCATCCGTTCCTACTCAC...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp CAGTTAAAGAATGGAGACACCTCAAAAAGGTCTAGTAAGACCCAAAGAGGAAATAATAAGAAGCAGAGGTaGGTAGGAACGGATGAAGGA +
Preference number: 4 (lower is better)
Translates to: QLKNGDTSKRSSKTQRGNNKKQR*VGTDEG
Trigger: TCCTTCATCCGTTCCTACTCACCTCTGCTTCTTATT...ATTTCCTCTTTGGGTCTTACTAGACCTTTTTGAGGTGTCTCCATTCTTTAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDITSSSS*SEEELS
Trigger: TGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTGGGTTCATCCATCCTaGCGCACTGAAATTTATTAC +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIWVHPS*RTEIYY
Trigger: GTAATAAATTTCAGTGCGTCAGGATGGATGAACCCA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCAAGAGGTTACACTaGATGAGAATGGATGATGAA +
Preference number: 4 (lower is better)
Translates to: HILLFPHPYTLELSHPTICKRLH*MRMDDE
Trigger: TTCATCATCCATTCTCATTCAGTGTAACCTCTTGCA...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp AATGCCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAATGGAGTTGAAGGCATaGTCGTACTTGGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: NAPYKCLRYYVYLFQESEMELKA*SYLAVP
Trigger: GGGAACTGCCAAGTACGAGCATGCCTTCAACTCCAT...TTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp TGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAGAACCTCAACACCCATTTTaGAGAATGTGGGTCCATTCA +
Preference number: 4 (lower is better)
Translates to: WSERSDSWNQNIMFPTLEPQHPF*RMWVHS
Trigger: TGAATGGACCCACATTCTGCAAAATGGGTGTTGAGG...TTCTAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCACACCCAACAATTTaGTGTTGGGACCTGACTATA +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTSHPTI*CWDLTI
Trigger: TATAGTCAGGTCCCAACAGCAAATTGTTGGGTGTGA...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp AATGCCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAAGGCATGCTCGTACTTaGCAGTTCCCAGAGTTACTC +
Preference number: 4 (lower is better)
Translates to: NAPYKCLRYYVYLFQESERHART*QFPELL
Trigger: GAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCT...TTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp CCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAGTGGGTGCTAACACTGATGTaGGAGGTTCTTTTCCTGACT +
Preference number: 4 (lower is better)
Translates to: PLTNASGIMYICFRNQKWVLTLM*EVLFLT
Trigger: AGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCAC...CCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGGAGCGTTCTGACTCTTaGAATCAGAATATAATGTTC +
Preference number: 4 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEERSDS*NQNIMF
Trigger: GAACATTATATTCTGATTCCAAGAGTCAGAACGCTC...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTACAGCAGGTTTGGGCTaGTATTTCTTCTTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSTAGLG*YFFFSL
Trigger: TAAAGAGAAGAAGAAATACCAGCCCAAACCTGCTGT...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCCTTTTCTCTCATCTaGTTTTGCCATAACTTACAA +
Preference number: 4 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHPFSLI*FCHNLQ
Trigger: TTGTAAGTTATGGCAAAACCAGATGAGAGAAAAGGG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTCCAACAATTTGCTGTTaGGACCTGACTATACATCTG +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTPTICC*DLTIHL
Trigger: CAGATGTATAGTCAGGTCCCAACAGCAAATTGTTGG...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAGTTAAAGAATGGAGACACCTCAAAAAGGTCTAGTAAGACCCAAAGAGGAAATAGCAAATCCTGTGACTaGAACCTTAGAGAGATGGAA +
Preference number: 4 (lower is better)
Translates to: QLKNGDTSKRSSKTQRGNSKSCD*NLREME
Trigger: TTCCATCTCTCTAAGGTTTCAGTCACAGGATTTGCT...ATTTCCTCTTTGGGTCTTACTAGACCTTTTTGAGGTGTCTCCATTCTTTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCTCAATCCAACACATCTaGCTACCACAAATACAACCA +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVISIQHI*LPQIQP
Trigger: TGGTTGTATTTGTGGTAGTCAGATGTGTTGGATTGA...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp AAGAACTCCCAAATGCCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCTCTCAAGACTGCCTTTaGCAGAAAGTTATGCGAGTG +
Preference number: 4 (lower is better)
Translates to: KNSQMPLTNASGIMYICFSQDCL*QKVMRV
Trigger: CACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGA...GAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATTTGGGAGTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCTCTCATCTGGTTTTaGCATAACTTACAAATAGTC +
Preference number: 4 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVSLIWF*HNLQIV
Trigger: GACTATTTGTAAGTTATGGCAAAACCAGATGAGAGA...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp CAGTGTGAATTTGGGAATTCACTGAGATTGAATCTACCTCTTGAACTGAACATCGTGATTATCAAACTCTaGATTTTGGGGGAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QCEFGNSLRLNLPLELNIVIIKL*ILGESS
Trigger: TGAGCTTTCCCCCAAAATTCAGAGTTTGATAATCAC...GATGTTCAGTTCAAGAGGTAGATTCAATCTCAGTGAATTCCCAAATTCACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTCAATTTGGAGTTGTTTaGGTTTTTCAACAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDIQFGVV*VFQQHQ
Trigger: CTGATGCTGTTGAAAAACTCAAACAACTCCAAATTG...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTCCATCCTGACGCACTaGAATTTATTACAGACATTA +
Preference number: 4 (lower is better)
Translates to: SLDLGFIHPDALKFITDISILTH*NLLQTL
Trigger: TAATGTCTGTAATAAATTTCAGTGCGTCAGGATGGA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR TCA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCAGAGGTTACACTGAATaGGAATGGATGATGAATGAT +
Preference number: 4 (lower is better)
Translates to: FITDITRMEGEEWCFSVIRGYTE*EWMMND
Trigger: ATCATTCATCATCCATTCTCATTCAGTGTAACCTCT...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CCA 90 bp AGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAGAAAAACGACATTCACGTGATTaGCAAATCTGGAAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SERSDSWNQNIMFPTLEKRHSRD*QIWKAL
Trigger: AAGTGCCTTCCAGATTTGCCAATCACGTGAATGTCG...TTTTTCTAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp CAGTGTGAATTTGGGAATTCACTGAGATTGAATCTACCTCTTGAACTGAACATCTCAAACTCTGAATTTTaGGGGAAAGCTCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: QCEFGNSLRLNLPLELNISNSEF*GKAHSS
Trigger: GCTTGAATGAGCTTTCCCCCAAAATTCAGAGTTTGA...GATGTTCAGTTCAAGAGGTAGATTCAATCTCAGTGAATTCCCAAATTCACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTAAGTTAAATGAATGCTaGCTTAAGGTCAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTKLNEC*LKVRGV
Trigger: AACTCCTCTGACCTTAAGCCAGCATTCATTTAACTT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR GCA 90 bp GGATTCTTAATTAACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACAATGCCCCTTACAAATaGCTCAGGTATTATGTATAT +
Preference number: 4 (lower is better)
Translates to: GFLINFSRLPLPESYASDNAPYK*LRYYVY
Trigger: ATATACATAATACCTGAGGCATTTGTAAGGGGCATT...GTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAATTAAGAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR GCA 90 bp AATGCCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAATTAACTTCTCAAGACTaGCTTTGCCAGAAAGTTATG +
Preference number: 4 (lower is better)
Translates to: NAPYKCLRYYVYLFQESELTSQD*LCQKVM
Trigger: CATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAA...TTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
3UTR CAA 72 bp AATGCCCCTTACAAATGCCTCAGGTATTATGTATATTaGTTTCAGGAATCAGAAGTGGACTGTATTTTTCAG +
Preference number: 4 (lower is better)
Translates to: NAPYKCLRYYVY*FQESEVDCIFQ
Trigger: CTGAAAAATACAGTCCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CCA 90 bp AATGCCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAAACATTAGAAAAATATaGCTTTTCCACGTCTCTACC +
Preference number: 4 (lower is better)
Translates to: NAPYKCLRYYVYLFQESENIRKI*LFHVST
Trigger: GGTAGAGACGTGGAAAAGCCATATTTTTCTAATGTT...TTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGGCATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS GCA 90 bp GGCAAAGCCGGCTTCTCTGGCCGCGGGATACCCACCCGGCCGCACTaGTCTCGCCACGATCCCTCCCGGCCGCAGCGCCGACGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GKAGFSGRGIPTRPH*SRHDPSRPQRRRRL
Trigger: GAGCCGGCGTCGGCGCTGCGGCCGGGAGGGATCGTGGCGAGAGCAGTGCGGCCGGGTGGGTATCCCGCGGCCAGAGAAGCCGGCTTTGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557055.5
ENST00000649389.1
CDS CCA 90 bp TCCCCGGCGTCCGCCGAAAGGTCGCCGCGGCAAAGCCGGCTTCTCTaGCCGCGGGATACCCACCCGGCCGCACTGCTCTCGCCACGATCC +
Preference number: 5 (lower is better)
Translates to: SPASAERSPRQSRLL*PRDTHPAALLSPRS
Trigger: GGATCGTGGCGAGAGCAGTGCGGCCGGGTGGGTATCCCGCGGCCAGAGAAGCCGGCTTTGCCGCGGCGACCTTTCGGCGGACGCCGGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000557055.5
ENST00000649389.1
CDS GCA 90 bp CGAGGGGTCCAGGCGGTGGGTGCGGGTGGAGGTATGCTCCGAGCATaGTTGAACAGGACTCACTGCCGTCTGCCTGCCTGTCTGCCACTC +
Preference number: 5 (lower is better)
Translates to: RGVQAVGAGGGMLRA*LNRTHCRLPACLPL
Trigger: GAGTGGCAGACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAAGCATGCTCGGAGCATACCTCCACCCGCACCCACCGCCTGGACCCCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CCA 90 bp GAGCCTCCATCCACCACATGGTTCTCCCCGGAGGAGCTCTCGGACTaGTCTGGGGAAGATGACAGTCCTGGGAGGTGCTCTTCCGTGCCC +
Preference number: 5 (lower is better)
Translates to: EPPSTTWFSPEELSD*SGEDDSPGRCSSVP
Trigger: GGGCACGGAAGAGCACCTCCCAGGACTGTCATCTTCCCCAGACCAGTCCGAGAGCTCCTCCGGGGAGAACCATGTGGTGGATGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 90 bp CACTGCCGTCTGCCTGCCTGTCTGCCACTCCGTCCTCTTGTCAGTTaGGTCAGCCCCAGAAGCCTGGCCACTCGTCTGCTCCTCAGCATT +
Preference number: 5 (lower is better)
Translates to: HCRLPACLPLRPLVS*VSPRSLATRLLLSI
Trigger: AATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGACGGCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS GCA 90 bp GGGTCACGATTGGCGGAGAAGCCAGTTGACATCCTCAGCCAGCTCTaGACCTCCACCTCTGCCCCATTGACACTTGTGGCCGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: GSRLAEKPVDILSQL*TSTSAPLTLVAVLS
Trigger: ACTCAGGACGGCCACAAGTGTCAATGGGGCAGAGGTGGAGGTGCAGAGCTGGCTGAGGATGTCAACTGGCTTCTCCGCCAATCGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp AGGTATGCTCCGAGCATGCTTGAACAGGACTCACTGCCGTCTGCCTaGCTGTCTGCCACTCCGTCCTCTTGTCAGTTGAGTCAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RYAPSMLEQDSLPSA*LSATPSSCQLSQPQ
Trigger: CTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAAGCATGCTCGGAGCATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CCA 90 bp ATTGTCATCAAAGGTGACCCAGCTGGGAAAACGAGCAGAGGTCACTaGAGGGGCAGGGTGCCCATTCATGGCTGGACTGCTGGCCTGCCA +
Preference number: 5 (lower is better)
Translates to: IVIKGDPAGKTSRGH*RGRVPIHGWTAGLP
Trigger: TGGCAGGCCAGCAGTCCAGCCATGAATGGGCACCCTGCCCCTCCAGTGACCTCTGCTCGTTTTCCCAGCTGGGTCACCTTTGATGACAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000556280.1
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 90 bp ATTGGCCACCCGTCACGAGGCTGGGACCGTGCTGATCCAGGCGGGTaGGCATCTAGTTCAATCCAGGCTACTGGGTCATCATCAGGTAGA +
Preference number: 5 (lower is better)
Translates to: IGHPSRGWDRADPGG*ASSSIQATGSSSGR
Trigger: TCTACCTGATGATGACCCAGTAGCCTGGATTGAACTAGATGCTCACCCGCCTGGATCAGCACGGTCCCAGCCTCGTGACGGGTGGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp AGGCCCAGGCGGCACTCTGCGAGCCCAGACAGGAAACTCAGGATGTaGATCCGTGTCAAGACATGGTGCTGGAGAATCTGGTTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: RPRRHSASPDRKLRM*IRVKTWCWRIWLSP
Trigger: AGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCTGTCTGGGCTCGCAGAGTGCCGCCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp GTCTGCCACTCCGTCCTCTTGTCAGTTGAGTCAGCCCCAGAAGCCTaGCCACTCGTCTGCTCCTCAGCATTGATGAGCTGCAGATCTGTA +
Preference number: 5 (lower is better)
Translates to: VCHSVLLSVESAPEA*PLVCSSALMSCRSV
Trigger: TACAGATCTGCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS-3UTR CAA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCCGTCCTCTTGTCAGTaGAGTCAGCCCCAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQPSSCQ*SQPQKP
Trigger: AGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGG...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS GCA 90 bp TTCATTCCCTTTGACGAGGATGTCATTGAGGCCCAGGCGGCACTCTaGGAGCCCAGACAGGAAACTCAGGATGTGGATCCGTGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: FIPFDEDVIEAQAAL*EPRQETQDVDPCQD
Trigger: GTCTTGACACGGATCCACATCCTGAGTTTCCTGTCTGGGCTCGCAGAGTGCCGCCTGGGCCTCAATGACATCCTCGTCAAAGGGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp ACCTCAGCTTACTGCAACCTCCGCTCCCAGGTTCAGCAATTCACATaGCTCAGCCTCCTGAGTGGCTGGGATTACAGAAGTGCACGACCA +
Preference number: 5 (lower is better)
Translates to: TSAYCNLRSQVQQFT*LSLLSGWDYRSARP
Trigger: TGGTCGTGCACTTCTGTAATCCCAGCCACTCAGGAGGCTGAGGCATGTGAATTGCTGAACCTGGGAGCGGAGGTTGCAGTAAGCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCGAGTGGGAATGGTCTaGAGAGCCTCCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLRVGMV*RASIHH
Trigger: GTGGTGGATGGAGGCTCTCAAGACCATTCCCACTCG...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGGATCCTCAACATCATaGGCCACCCGTCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLGSSTS*ATRHEA
Trigger: AGCCTCGTGACGGGTGGCCAATGATGTTGAGGATCC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCGGCACTCATGGAGCTaGATCCACTTTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQRHSWS*IHFVVV
Trigger: CACCACCACAAAGTGGATCAAGCTCCATGAGTGCCG...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS GCA 90 bp GCCCCAGAAGCCTGGCCACTCGTCTGCTCCTCAGCATTGATGAGCTaGAGATCTGTATACGAACATCCAAAGCTAGGACTGCTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: APEAWPLVCSSALMS*RSVYEHPKLGLLVS
Trigger: AGACACCAGCAGTCCTAGCTTTGGATGTTCGTATACAGATCTGCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCGGATCCTCAACATCATaGGCCACCCGTCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGGSSTS*ATRHEA
Trigger: AGCCTCGTGACGGGTGGCCAATGATGTTGAGGATCC...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGTCCACCTCTGCCCCATaGACACTTGTGGCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWSTSAP*TLVAVL
Trigger: CAGGACGGCCACAAGTGTCAATGGGGCAGAGGTGGA...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp GCTTTGGAGGCAGAAGTTGTGGGCATGCTGAACTCGACATTCACGTaGTTGGCAAATCTGGAAGGCACTTCCCGGTCAGAGCCGAGTTCA +
Preference number: 5 (lower is better)
Translates to: ALEAEVVGMLNSTFT*LANLEGTSRSEPSS
Trigger: TGAACTCGGCTCTGACCGGGAAGTGCCTTCCAGATTTGCCAATCACGTGAATGTCGAGTTCAGCATGCCCACAACTTCTGCCTCCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553821.2
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp TTGCCCGTGGTACTGGAAATGGAACTGTTTTGGGAGCGCCTCTCCTaGTCCTCAAAGAAAGCACTGAAAGGGTTGATAGGGGAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LPVVLEMELFWERLS*SSKKALKGLIGEGC
Trigger: ACAGCCCTCCCCTATCAACCCTTTCAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTCCAGTACCACGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp ATTAAACCAGATGAGAACTCCGTCTGCTCTCCCCTATGCGACCAGTaGTTCAGGGTTAGGGGGCAGATGAAATGGAATCCTGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: IKPDENSVCSPLCDQ*FRVRGQMKWNPGSP
Trigger: AGGGCTGCCAGGATTCCATTTCATCTGCCCCCTAACCCTGAAGCACTGGTCGCATAGGGGAGAGCAGACGGAGTTCTCATCTGGTTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 90 bp GTCCTCTTGTCAGTTGAGTCAGCCCCAGAAGCCTGGCCACTCGTCTaGTCCTCAGCATTGATGAGCTGCAGATCTGTATACGAACATCCA +
Preference number: 5 (lower is better)
Translates to: VLLSVESAPEAWPLV*SSALMSCRSVYEHP
Trigger: TGGATGTTCGTATACAGATCTGCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CCA 90 bp TCTGTATACGAACATCCAAAGCTAGGACTGCTGGTGTCTTCAGAATaGGTGGTCCAGCTGCTCTCAGAAGTCAGAGGGCATCTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: SVYEHPKLGLLVSSE*VVQLLSEVRGHLPR
Trigger: CCTGGGGAGATGCCCTCTGACTTCTGAGAGCAGCTGGACCACCCATTCTGAAGACACCAGCAGTCCTAGCTTTGGATGTTCGTATACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp GCGAGCCCAGACAGGAAACTCAGGATGTGGATCCGTGTCAAGACATaGTGCTGGAGAATCTGGTTGTCTCCTTTGCTCACAATGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ASPDRKLRMWIRVKT*CWRIWLSPLLTMPE
Trigger: CTCTGGCATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCTGTCTGGGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp TTTCCCCCAGGACACTTTCCCTGCGGAAGTTTTTCACCCACTCACTaGGCACAGGGTAACGGATCATCACATTCTCACAGGGAACCTGAG +
Preference number: 5 (lower is better)
Translates to: FPPGHFPCGSFSPTH*AQGNGSSHSHREPE
Trigger: CTCAGGTTCCCTGTGAGAATGTGATGATCCGTTACCCTGTGCCCAGTGAGTGGGTGAAAAACTTCCGCAGGGAAAGTGTCCTGGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp CTCCAACAGTCAGGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTCCTTGCCGCAAGGCTTaGTCACTGCACTCCACACTC +
Preference number: 5 (lower is better)
Translates to: LQQSGEPRALGMTRIKEPPCRKA*SLHSTL
Trigger: GAGTGTGGAGTGCAGTGACAAAGCCTTGCGGCAAGG...AGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACCTGACTGTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCGAGTGGGAATGGTCTaGAGAGCCTCCATCCACCAC +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWRVGMV*RASIHH
Trigger: GTGGTGGATGGAGGCTCTCAAGACCATTCCCACTCG...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCTCAGGAAAGGGTTGGTaGCCCTCCAAGGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGSGKGW*PSKVKP
Trigger: AGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGA...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAATCATTCAGGAAAGGGTaGGTTGCCCTCCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQSFRKG*VALQGE
Trigger: TTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGA...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCCAGTGTCTGTCAGTTaGACGAAGATCGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGPVSVS*TKIGPQ
Trigger: CTGGGGACCGATCTTCGTCAAACTGACAGACACTGG...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTGTGCTCAAGTCCATaGACAACACTGGCAGATCCA +
Preference number: 5 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQLCSSP*TTLADP
Trigger: TGGATCTGCCAGTGTTGTCAATGGACTTGAGCACAG...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTGTGAGGGGGTCACGATaGGCGGAGAAGCCAGTTGAC +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPVRGSR*AEKPVD
Trigger: GTCAACTGGCTTCTCCGCCAATCGTGACCCCCTCAC...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAAGAATACCACTGGGGTaGCTGATCCAAAGCACATGG +
Preference number: 5 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQRIPLG*LIQSTW
Trigger: CCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCT...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp CAGATCAGCCTCTCTTGCCGTTGGTTAATCTGCCAGGCAGAAATCTaGAACCGCACAATTCAAACCCAGGCAGTCTGGCTCCAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: QISLSCRWLICQAEI*NRTIQTQAVWLQSL
Trigger: CAGACTCTGGAGCCAGACTGCCTGGGTTTGAATTGTGCGGTTTCAGATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554710.1
ENST00000555447.5
ENST00000557055.5
ENST00000649389.1
CDS TCA 90 bp CGAGTGGGCAGGAAAGGGTGGCTCTTCATTGAAGGAGACCCATTCTaGCTGGTGGGTGGCAATCACATGGTCCAAAGTCGTCATGCTAAA +
Preference number: 5 (lower is better)
Translates to: RVGRKGWLFIEGDPF*LVGGNHMVQSRHAK
Trigger: TTTAGCATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTTTCCTGCCCACTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp GAGGAATTGTCAGTTGAGTCAGCCCCAGAAGCCTGGCCACTCGTCTaGTCCTCAGCATTGATGAGCTGCAGATCTGTATACGAACATCCA +
Preference number: 5 (lower is better)
Translates to: EELSVESAPEAWPLV*SSALMSCRSVYEHP
Trigger: TGGATGTTCGTATACAGATCTGCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000652748.1
CDS GCA 90 bp GTCATCGTAATTGGTGGTGCCCAGCTTAATCACCTGTTCCCTCTCTaGTGTGTGGGCCACAGCAGGTTTGGGCTGGTATTTCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VIVIGGAQLNHLFPL*CVGHSRFGLVFLLL
Trigger: GAGAAGAAGAAATACCAGCCCAAACCTGCTGTGGCCCACACAGCAGAGAGGGAACAGGTGATTAAGCTGGGCACCACCAATTACGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp TTGTGGAAAACATCCTCATCCACACACCCATGGAAACGGCACTCATaGAGCTTGATCCACTTTGTGGTGGTGGTGGGCATGATGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LWKTSSSTHPWKRHS*SLIHFVVVVGMMSC
Trigger: GCAGGACATCATGCCCACCACCACCACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp AACCGGCACGCATCCAAAGGGTTGAACAGAATGACCCGTGAGTTGTaGAAAACATCCTCATCCACACACCCATGGAAACGGCACTCATGG +
Preference number: 5 (lower is better)
Translates to: NRHASKGLNRMTREL*KTSSSTHPWKRHSW
Trigger: CCATGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACGGGTCATTCTGTTCAACCCTTTGGATGCGTGCCGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCCCGGAAGCTGAGTTTTaGTCCGGCAGTCGGTTTATC +
Preference number: 5 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGPEAEF*SGSRFI
Trigger: GATAAACCGACTGCCGGACAAAAACTCAGCTTCCGG...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCAGCCTCTCTTGCCGTaGGTTAATCTGCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWQPLLP*VNLPGR
Trigger: TCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTG...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGTTCATCAAAGTGCTCTaGGGACGGTCCCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: HMEAQQCLRLQSWCGARQFIKVL*GRSLFL
Trigger: TAAGAAGAGGGACCGTCCCAAGAGCACTTTGATGAA...CTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTAAAGCACTGAAAGGGTaGATAGGGGAGGGCTGTACA +
Preference number: 5 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLKALKG*IGEGCT
Trigger: TGTACAGCCCTCCCCTATCAACCCTTTCAGTGCTTT...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAAGAATCTCTTTGGCTTTaGCCCGTGGTACTGGAAATG +
Preference number: 5 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQESLWL*PVVLEM
Trigger: CATTTCCAGTACCACGGGCAAAAGCCAAAGAGATTC...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACATCATCAGGTAGAGTaGCACTGCCAAAGTGATCAG +
Preference number: 5 (lower is better)
Translates to: AQQCLRLQSWCGARQHPQHHQVE*HCQSDQ
Trigger: CTGATCACTTTGGCAGTGCAACTCTACCTGATGATG...TTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTGGCGGAGAAGCCAGTaGACATCCTCAGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPWRRSQ*TSSASS
Trigger: AGAGCTGGCTGAGGATGTCAACTGGCTTCTCCGCCA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS GCA 90 bp TTGTCCGGCAGTCGGTTTATCCTCCACACAATGGAGTTGAAGGCATaGTCGTACTTGGCAGTTCCCAGAGTTACTCTCATGACAGGCTCA +
Preference number: 5 (lower is better)
Translates to: LSGSRFILHTMELKA*SYLAVPRVTLMTGS
Trigger: TGAGCCTGTCATGAGAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAGGATAAACCGACTGCCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553821.2
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp GCAGGAAAGGGTGGCTCTTCATTGAAGGAGACCCATTCTGACTGGTaGGTGGCAATCACATGGTCCAAAGTCGTCATGCTAAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: AGKGGSSLKETHSDW*VAITWSKVVMLKRH
Trigger: GTGCCTTTTTAGCATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp TGGGCAGGAAAGGGTGGCTCTTCATTGAAGGAGACCCATTCTGACTaGTGGGTGGCAATCACATGGTCCAAAGTCGTCATGCTAAAAAGG +
Preference number: 5 (lower is better)
Translates to: WAGKGGSSLKETHSD*WVAITWSKVVMLKR
Trigger: CCTTTTTAGCATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTTTCCTGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp AGAATGACCCGTGAGTTGTGGAAAACATCCTCATCCACACACCCATaGAAACGGCACTCATGGAGCTTGATCCACTTTGTGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RMTRELWKTSSSTHP*KRHSWSLIHFVVVV
Trigger: CACCACCACCACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACGGGTCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp CAAGGGCAGTACTCAGAATGTAGACAGATCAGCCTCTCTTGCCGTTaGTTAATCTGCCAGGCAGAAATAGTTCCACATGGCTGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: QGQYSECRQISLSCR*LICQAEIVPHGWGS
Trigger: GCTTCCCCAGCCATGTGGAACTATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGTCTACATTCTGAGTACTGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS-3UTR CAA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACAGATCTCACGCTGGCTTaGGAGGCAGAAGTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: STWRVRPTSVSGSTQILTDLTLA*EAEVVG
Trigger: GCCCACAACTTCTGCCTCCAAAGCCAGCGTGAGATC...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCACAGATCAGCCTCTCTaGCCGTTGGTTAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: QTLQEWRVRNGASLSSPGTDQPL*PLVNLP
Trigger: TGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGT...GCCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGAGGAGGAATTGTCAGTaGAGTCAGCCCCAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: CLRLQSWCGARQHPQLELRRNCQ*SQPQKP
Trigger: AGGCTTCTGGGGCTGACTCAACTGACAATTCCTCCT...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555447.5
CDS-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGGATCACAGATGCACTaGGTGGTGTATTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLGSQMH*VVYLAS
Trigger: TGAAGCCAAATACACCACCAAGTGCATCTGTGATCC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGCTGGAGAATCTGGTaGTCTCCTTTGCTCACAATG +
Preference number: 5 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSCWRIW*SPLLTM
Trigger: CATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCA...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTAGAATGACCCGTGAGTaGTGGAAAACATCCTCATCC +
Preference number: 5 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLRMTRE*WKTSSS
Trigger: GGATGAGGATGTTTTCCACAACTCACGGGTCATTCT...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGCACGCATCCAAAGGGTaGAACAGAATGACCCGTGAG +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWHASKG*NRMTRE
Trigger: CTCACGGGTCATTCTGTTCAACCCTTTGGATGCGTG...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTCCACCTCTGCCCCATaGACACTTGTGGCCGTCCTG +
Preference number: 5 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHSTSAP*TLVAVL
Trigger: CAGGACGGCCACAAGTGTCAATGGGGCAGAGGTGGA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS GCA 90 bp TCAAAGAAAGCACTGAAAGGGTTGATAGGGGAGGGCTGTACATCCTaGAGAGTCTCATTCAGGAAAGGGTTGGTTGCCCTCCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: SKKALKGLIGEGCTS*RVSFRKGLVALQGE
Trigger: TTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTCCCCTATCAACCCTTTCAGTGCTTTCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp AGCCCAGACAGGAAACTCAGGATGTGGATCCGTGTCAAGACATGGTaGTGGAGAATCTGGTTGTCTCCTTTGCTCACAATGCCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: SPDRKLRMWIRVKTW*WRIWLSPLLTMPEN
Trigger: ATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCTGTCTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 90 bp TCTTGCCAAGGGCAGTACTCAGAATGTAGACAGATCAGCCTCTCTTaGCGTTGGTTAATCTGCCAGGCAGAAATAGTTCCACATGGCTGG +
Preference number: 5 (lower is better)
Translates to: SCQGQYSECRQISLS*RWLICQAEIVPHGW
Trigger: CCAGCCATGTGGAACTATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGTCTACATTCTGAGTACTGCCCTTGGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CCA 90 bp GAATCTCTTTGGCTTTTGCCCGTGGTACTGGAAATGGAACTGTTTTaGGAGCGCCTCTCCTGCTCCTCAAAGAAAGCACTGAAAGGGTTG +
Preference number: 5 (lower is better)
Translates to: ESLWLLPVVLEMELF*ERLSCSSKKALKGL
Trigger: CAACCCTTTCAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTCCAGTACCACGGGCAAAAGCCAAAGAGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAAGGCATGCTCGTACTaGGCAGTTCCCAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIKACSY*AVPRVT
Trigger: AGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTCCACACAATGGAGTaGAAGGCATGCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQILHTME*KACSYL
Trigger: CAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAG...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGGATCTCACGCTGGCTTaGGAGGCAGAAGTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEDLTLA*EAEVVG
Trigger: GCCCACAACTTCTGCCTCCAAAGCCAGCGTGAGATC...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp GAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCGATCTCACGCTGGCTTaGGAGGCAGAAGTTGTGGGC +
Preference number: 5 (lower is better)
Translates to: EEDAGIPYSVQLESIQHIDLTLA*EAEVVG
Trigger: GCCCACAACTTCTGCCTCCAAAGCCAGCGTGAGATC...GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCATGGTGTGGGGCACGAGATGTACTTTTTaGCCTCGTGAGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: SKAHGGATVLKASVMVWGTRCTF*PRELFS
Trigger: GGAAAACAACTCACGAGGCAAAAAAGTACATCTCGT...GCCCCACACCATGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCACAGATCAGCCTCTCTaGCCGTTGGTTAATCTGCCA +
Preference number: 5 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQITDQPL*PLVNLP
Trigger: TGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCAAGGGTGGCTCTTCATaGAAGGAGACCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIKGGSS*KETHSD
Trigger: GTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTT...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACATCAGGAAAGGGTTGGTaGCCCTCCAAGGTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: STWRVRPTSVSGSTQILTSGKGW*PSKVKP
Trigger: AGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGA...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCCAGTGTCTGTCAGTTaGACGAAGATCGGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAPVSVS*TKIGPQ
Trigger: CTGGGGACCGATCTTCGTCAAACTGACAGACACTGG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAATCTGGTTGTCTCCTTaGCTCACAATGCCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSIWLSP*LTMPEN
Trigger: ATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGAT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTGAGGAGGAATTGTCATaGGGAGCAGAGGCCCCCTCC +
Preference number: 5 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSEEELS*GAEAPS
Trigger: GGAGGGGGCCTCTGCTCCCAATGACAATTCCTCCTC...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS TCA 90 bp AATCTCCTCTTCAAGGTAGTTGAGGCCAACTGTGCTCAAGTCCATTaGCAACACTGGCAGATCCATGAGACGGTCCTGAACTGCATGGAT +
Preference number: 5 (lower is better)
Translates to: NLLFKVVEANCAQVH*QHWQIHETVLNCMD
Trigger: ATCCATGCAGTTCAGGACCGTCTCATGGATCTGCCAGTGTTGTCAATGGACTTGAGCACAGTTGGCCTCAACTACCTTGAAGAGGAGATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 90 bp CACGGATTTCAGTCCTCATCCTTTCACGACTGCAGGATGACTTCCTaGCATCCCCAGAGATGGTTCTGCCTTGACACCACATTAGGAAAA +
Preference number: 5 (lower is better)
Translates to: HGFQSSSFHDCRMTS*HPQRWFCLDTTLGK
Trigger: TTTTCCTAATGTGGTGTCAAGGCAGAACCATCTCTGGGGATGTCAGGAAGTCATCCTGCAGTCGTGAAAGGATGAGGACTGAAATCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556280.1
CDS GCA 90 bp TACTCAGAATGTAGACAGATCAGCCTCTCTTGCCGTTGGTTAATCTaGCAGGCAGAAATAGTTCCACATGGCTGGGGAAGCCTCACAATC +
Preference number: 5 (lower is better)
Translates to: YSECRQISLSCRWLI*QAEIVPHGWGSLTI
Trigger: GATTGTGAGGCTTCCCCAGCCATGTGGAACTATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGTCTACATTCTGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 90 bp AGTTACAGAATTAAACCAGATGAGAACTCCGTCTGCTCTCCCCTATaGGACCAGTGCTTCAGGGTTAGGGGGCAGATGAAATGGAATCCT +
Preference number: 5 (lower is better)
Translates to: SYRIKPDENSVCSPL*DQCFRVRGQMKWNP
Trigger: AGGATTCCATTTCATCTGCCCCCTAACCCTGAAGCACTGGTCGCATAGGGGAGAGCAGACGGAGTTCTCATCTGGTTTAATTCTGTAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CCA 90 bp CCAGACAGGAAACTCAGGATGTGGATCCGTGTCAAGACATGGTGCTaGAGAATCTGGTTGTCTCCTTTGCTCACAATGCCAGAGAATTCA +
Preference number: 5 (lower is better)
Translates to: PDRKLRMWIRVKTWC*RIWLSPLLTMPENS
Trigger: TGAATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp GGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTCAGTCAACGAGATGTACTTTTTaGCCTCGTGAGTTGTTTTCC +
Preference number: 5 (lower is better)
Translates to: GVADPKHMEAQQCLRLQSTRCTF*PRELFS
Trigger: GGAAAACAACTCACGAGGCAAAAAAGTACATCTCGT...TGACTGAAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTTCTGTTCTAGGTGTCTaGCCAAGGGCAGTACTCAGA +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPSVLGV*PRAVLR
Trigger: TCTGAGTACTGCCCTTGGCAAGACACCTAGAACAGA...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCTTCATCAAAGTGCTCTaGGGACGGTCCCTCTTCTTA +
Preference number: 5 (lower is better)
Translates to: IPSTWRVRPTSVSGSTQIFIKVL*GRSLFL
Trigger: TAAGAAGAGGGACCGTCCCAAGAGCACTTTGATGAA...GATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGGAATCTCTTTGGCTTTaGCCCGTGGTACTGGAAATG +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWESLWL*PVVLEM
Trigger: CATTTCCAGTACCACGGGCAAAAGCCAAAGAGATTC...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACCACTGGGGTTGCTGATCCAAAGCACATGGAGGCGCAACAGTGCTTAAGGCTTGAGTGTGACTGGGTTTaGCTTGAATCATCAAAACTG +
Preference number: 5 (lower is better)
Translates to: TTGVADPKHMEAQQCLRLECDWV*LESSKL
Trigger: CAGTTTTGATGATTCAAGCAAAACCCAGTCACACTC...AAGCCTTAAGCACTGTTGCGCCTCCATGTGCTTTGGATCAGCAACCCCAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TGCTTAAGGCTTCAGTCATGGTGTGGGGCTAGACAGCATCCCCAACTAGAATTGCATCATCAGGTAGAGTaGCACTGCCAAAGTGATCAG +
Preference number: 5 (lower is better)
Translates to: CLRLQSWCGARQHPQLELHHQVE*HCQSDQ
Trigger: CTGATCACTTTGGCAGTGCAACTCTACCTGATGATG...CAATTCTAGTTGGGGATGCTGTCTAGCCCCACACCATGACTGAAGCCTTAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGCGGCACTCATGGAGCTaGATCCACTTTGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVRHSWS*IHFVVV
Trigger: CACCACCACAAAGTGGATCAAGCTCCATGAGTGCCG...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGTGAGGGGGTCACGATaGGCGGAGAAGCCAGTTGAC +
Preference number: 5 (lower is better)
Translates to: FITDITRMEGEEWCFSVIVRGSR*AEKPVD
Trigger: GTCAACTGGCTTCTCCGCCAATCGTGACCCCCTCAC...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGGGTTGTCTGTTTCTGTaGTCTGGTAGCTGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWGCLFL*SGSCSV
Trigger: CACACTACAGCTACCAGACAACAGAAACAGACAACC...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTAGAATACCACTGGGGTaGCTGATCCAAAGCACATGG +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPRIPLG*LIQSTW
Trigger: CCATGTGCTTTGGATCAGCAACCCCAGTGGTATTCT...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS GCA 90 bp AAGGGTTGGTTGCCCTCCAAGGTGAAGCCTCAGTTACAGAAGGCGTaGGGTTTAAAGAGGAAATATCCAGCTTCTGAACTTTGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: KGWLPSKVKPQLQKA*GLKRKYPASELWRS
Trigger: ACTTCTCCAAAGTTCAGAAGCTGGATATTTCCTCTTTAAACCGCACGCCTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACCAACCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 90 bp TCTTCATTGAAGGAGACCCATTCTGACTGGTGGGTGGCAATCACATaGTCCAAAGTCGTCATGCTAAAAAGGCACTGGTCATCTTCACAC +
Preference number: 5 (lower is better)
Translates to: SSLKETHSDWWVAIT*SKVVMLKRHWSSSH
Trigger: GTGTGAAGATGACCAGTGCCTTTTTAGCATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp CATCAGAAGGCAATCGTGCTAACACTGATGTGGGAGGTTCTTTTCCTGACTGTACTCCACACAATGGAGTaGAAGGCATGCTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: HQKAIVLTLMWEVLFLTVLHTME*KACSYL
Trigger: CAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAG...TACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp TACAAATCCAATGAAGTGTGCTTTCTGTCCCCCGACTTGTATTCTTCATGGGAGCCGGAAGCTGAGTTTTaGTCCGGCAGTCGGTTTATC +
Preference number: 5 (lower is better)
Translates to: YKSNEVCFLSPDLYSSWEPEAEF*SGSRFI
Trigger: GATAAACCGACTGCCGGACAAAAACTCAGCTTCCGG...CTCCCATGAAGAATACAAGTCGGGGGACAGAAAGCACACTTCATTGGATTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp GGTTCTTTTCCTGACTGTAACAGTCACAACAAACCACATACCAGTGCTGTGAGATGGGATCAGGATTCCTaGCCGCAAGGCTTTGTCACT +
Preference number: 5 (lower is better)
Translates to: GSFPDCNSHNKPHTSAVRWDQDS*PQGFVT
Trigger: AGTGACAAAGCCTTGCGGCAAGGAATCCTGATCCCA...TCTCACAGCACTGGTATGTGGTTTGTTGTGACTGTTACAGTCAGGAAAAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp GCAGTGGCCACAGCAGGTATTGACTGCAACTTCAGCTACTCAGGAAGACACCCTTTGTGCCTTTTTCCATaGTCTATTGTGACTCAGGAT +
Preference number: 5 (lower is better)
Translates to: AVATAGIDCNFSYSGRHPLCLFP*SIVTQD
Trigger: ATCCTGAGTCACAATAGACAATGGAAAAAGGCACAA...AGGGTGTCTTCCTGAGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCAGCCTCTCTTGCCGTaGGTTAATCTGCCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTIQPLLP*VNLPGR
Trigger: TCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATGGTAGTACGGTAGACTaGGGTCCAGGGTCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHGSTVD*GPGSVL
Trigger: TAGAACAGACCCTGGACCCAAGTCTACCGTACTACC...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCCTGTGCTCAAGTCCATaGACAACACTGGCAGATCCA +
Preference number: 5 (lower is better)
Translates to: ITDITRMEGEEWCFSVIALCSSP*TTLADP
Trigger: TGGATCTGCCAGTGTTGTCAATGGACTTGAGCACAG...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTGGCGGAGAAGCCAGTaGACATCCTCAGCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTWRRSQ*TSSASS
Trigger: AGAGCTGGCTGAGGATGTCAACTGGCTTCTCCGCCA...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp TCAGTTACAGAAGGCGTGCGGTTTAAAGAGGAAATATCCAGCTTCTaGACTTTGGAGAAGTTCATCAAAGTGCTCTTGGGACGGTCCCTC +
Preference number: 5 (lower is better)
Translates to: SVTEGVRFKEEISSF*TLEKFIKVLLGRSL
Trigger: GAGGGACCGTCCCAAGAGCACTTTGATGAACTTCTCCAAAGTTCAGAAGCTGGATATTTCCTCTTTAAACCGCACGCCTTCTGTAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 90 bp AGACCTGTCTGTGCCTCTTCATGCTCACACCATTGTTCTGATAGATaGTGCCAGTGGAACTTCCAAAGAAGCATTCCACCTGATCTTCAC +
Preference number: 5 (lower is better)
Translates to: RPVCASSCSHHCSDR*CQWNFQRSIPPDLH
Trigger: GTGAAGATCAGGTGGAATGCTTCTTTGGAAGTTCCACTGGCATCATCTATCAGAACAATGGTGTGAGCATGAAGAGGCACAGACAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp CTGGCCTGCCAGCTGATGGCCTCCATCTCTACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCTAAAAGGAAAAGGAGAACATATGAG +
Preference number: 5 (lower is better)
Translates to: LACQLMASISTSSSS*SEEELSKRKRRTYE
Trigger: CTCATATGTTCTCCTTTTCCTTTTAGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGTAGAGATGGAGGCCATCAGCTGGCAGGCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555284.1
CDS CCA 90 bp AAACTCAGGATGTGGATCCGTGTCAAGACATGGTGCTGGAGAATCTaGTTGTCTCCTTTGCTCACAATGCCAGAGAATTCATCTCTGACA +
Preference number: 5 (lower is better)
Translates to: KLRMWIRVKTWCWRI*LSPLLTMPENSSLT
Trigger: TGTCAGAGATGAATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp GGTGAACCTCGTGCTTTAGGCATGACCAGAATCAAAGAGCCTCTCCAAAAGCCAGGGAATTCACTGAGATaGAATCTACCTCTTGAACTG +
Preference number: 5 (lower is better)
Translates to: GEPRALGMTRIKEPLQKPGNSLR*NLPLEL
Trigger: CAGTTCAAGAGGTAGATTCAATCTCAGTGAATTCCC...TGGCTTTTGGAGAGGCTCTTTGATTCTGGTCATGCCTAAAGCACGAGGTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGAAGGGTGGCTCTTCATaGAAGGAGACCCATTCTGAC +
Preference number: 5 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVKGGSS*KETHSD
Trigger: GTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTT...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTATCTGGTTGTCTCCTTaGCTCACAATGCCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPIWLSP*LTMPEN
Trigger: ATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGAT...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTACTAGAATTGAGGGTTaGATCTGTGGGGTAACACGA +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPTRIEG*ICGVTR
Trigger: TCGTGTTACCCCACAGATCAAACCCTCAATTCTAGT...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACAATCATTCACTGGATCTaGGGTTCATCCATCCTGACG +
Preference number: 5 (lower is better)
Translates to: STWRVRPTSVSGSTQILTIIHWI*GSSILT
Trigger: CGTCAGGATGGATGAACCCAAGATCCAGTGAATGAT...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp GCTGTGGATTCTGCCATTCTCATCATAGTTTTGAAGCCGGGGTTCTaGAATCTCATGACAGATCTCCAGCTTGAACTCACGGAATGGTTT +
Preference number: 5 (lower is better)
Translates to: AVDSAILIIVLKPGF*NLMTDLQLELTEWF
Trigger: AAACCATTCCGTGAGTTCAAGCTGGAGATCTGTCATGAGATTTCAGAACCCCGGCTTCAAAACTATGATGAGAATGGCAGAATCCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS-3UTR CAA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCCCGGAAGCTGAGTTTTaGTCCGGCAGTCGGTTTATC +
Preference number: 5 (lower is better)
Translates to: FITDITRMEGEEWCFSVIPEAEF*SGSRFI
Trigger: GATAAACCGACTGCCGGACAAAAACTCAGCTTCCGG...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAACAAACCACATACCAGTGCTGTGAGATAAGCAGAGACAAGACAAGGAGGCTTTGCACTCCACACTCCTaGGGATTTTCCATTTCATCT +
Preference number: 5 (lower is better)
Translates to: QQTTYQCCEISRDKTRRLCTPHS*GFSISS
Trigger: AGATGAAATGGAAAATCCCAAGGAGTGTGGAGTGCA...AAGCCTCCTTGTCTTGTCTCTGCTTATCTCACAGCACTGGTATGTGGTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp CATCAGAAGGCAATCGTGCTAACACTGATGTGGGAGGTTCTTTTCCTGACTGTATTCTCAAGACTGCCTTaGCCAGAAAGTTATGCGAGT +
Preference number: 5 (lower is better)
Translates to: HQKAIVLTLMWEVLFLTVFSRLP*PESYAS
Trigger: ACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAA...TACAGTCAGGAAAAGAACCTCCCACATCAGTGTTAGCACGATTGCCTTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp CTCAGGATAGCAAATCCTGTGACTGAAACCTTAGAGAGATGGAAAAAGTGTTCCCCCTCAACACCCATTTaGCAGAATGTGGGTCCATTC +
Preference number: 5 (lower is better)
Translates to: LRIANPVTETLERWKKCSPSTPI*QNVGPF
Trigger: GAATGGACCCACATTCTGCAAAATGGGTGTTGAGGG...GGAACACTTTTTCCATCTCTCTAAGGTTTCAGTCACAGGATTTGCTATCCTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTTCTGTTCTAGGTGTCTaGCCAAGGGCAGTACTCAGA +
Preference number: 5 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSSVLGV*PRAVLR
Trigger: TCTGAGTACTGCCCTTGGCAAGACACCTAGAACAGA...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTGGTAGTACGGTAGACTaGGGTCCAGGGTCTGTTCTA +
Preference number: 5 (lower is better)
Translates to: SLDLGFIHPDALKFITDIGSTVD*GPGSVL
Trigger: TAGAACAGACCCTGGACCCAAGTCTACCGTACTACC...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCTGTGGGATCACAGATGCACTaGGTGGTGTATTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: LIDYPIIPSTWRVRPTSVGSQMH*VVYLAS
Trigger: TGAAGCCAAATACACCACCAAGTGCATCTGTGATCC...CACAGAAGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATAATGAGGGAATCTCTTaGGCTTTTGCCCGTGGTACT +
Preference number: 5 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHNEGIS*AFARGT
Trigger: AGTACCACGGGCAAAAGCCAAAGAGATTCCCTCATT...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGTTGGGACCTACTATTTCATTCCCTTaGACGAGGATGTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: PSPLYFRTLTPNNLLLGPTISFP*TRMSLR
Trigger: CCTCAATGACATCCTCGTCAAAGGGAATGAAATAGT...AGGTCCCAACAGCAAATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATAGAATGACCCGTGAGTaGTGGAAAACATCCTCATCC +
Preference number: 5 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHRMTRE*WKTSSS
Trigger: GGATGAGGATGTTTTCCACAACTCACGGGTCATTCT...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCCACGCATCCAAAGGGTaGAACAGAATGACCCGTGAG +
Preference number: 5 (lower is better)
Translates to: FITDITRMEGEEWCFSVIHASKG*NRMTRE
Trigger: CTCACGGGTCATTCTGTTCAACCCTTTGGATGCGTG...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTGGTCTTCACCACCCTCTTaGATCCTCTTTTTAAATCTG +
Preference number: 5 (lower is better)
Translates to: TDITRMEGEEWCFSVIAWSSPPS*ILFLNL
Trigger: CAGATTTAAAAAGAGGATCAAAGAGGGTGGTGAAGA...CCAGGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp AGTACTTGGAGGGTTAGACCTACTTCTGTGTCAGGTAGCACCCAAATCCTAACACCCAACAATTTGCTGTaGGGACCTGACTATACATCT +
Preference number: 5 (lower is better)
Translates to: STWRVRPTSVSGSTQILTPNNLL*GPDYTS
Trigger: AGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGG...TGTTAGGATTTGGGTGCTACCTGACACAGAAGTAGGTCTAACCCTCCAAGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGATTCTTAATTAACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACAAGGCATGCTCGTACTaGGCAGTTCCCAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: GFLINFSRLPLPESYASDKACSY*AVPRVT
Trigger: AGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTT...GTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAATTAAGAATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTAAGGCATGCTCGTACTaGGCAGTTCCCAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTKACSY*AVPRVT
Trigger: AGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTT...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGCCTTCCTGACGTCAGTCTaGTCTTCTACAGAGATAGAT +
Preference number: 5 (lower is better)
Translates to: ITDITRMEGEEWCFSVIAFLTSV*SSTEID
Trigger: ATCTATCTCTGTAGAAGACAAGACTGACGTCAGGAA...GGCGATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTTCATTCAGGAAAGGGTaGGTTGCCCTCCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTSFRKG*VALQGE
Trigger: TTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGA...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCAAAGCACTGAAAGGGTaGATAGGGGAGGGCTGTACA +
Preference number: 5 (lower is better)
Translates to: FITDITRMEGEEWCFSVIKALKG*IGEGCT
Trigger: TGTACAGCCCTCCCCTATCAACCCTTTCAGTGCTTT...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTAATGAGGGAATCTCTTaGGCTTTTGCCCGTGGTACT +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTINEGIS*AFARGT
Trigger: AGTACCACGGGCAAAAGCCAAAGAGATTCCCTCATT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTGCTGGAGAATCTGGTaGTCTCCTTTGCTCACAATG +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTICWRIW*SPLLTM
Trigger: CATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCA...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATCCTTACTCTGTCCAGTaGGAATCAATCCAACACATC +
Preference number: 5 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHPYSVQ*ESIQHI
Trigger: GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGG...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp ATTATGCATTTAAATCAGAGCAGACGCACCCACAGCTATGTATGGTaGACTTCCTCTAAGGCAGTAAGAGGTTACCAGGCGAACATAGTA +
Preference number: 5 (lower is better)
Translates to: IMHLNQSRRTHSYVW*TSSKAVRGYQANIV
Trigger: TACTATGTTCGCCTGGTAACCTCTTACTGCCTTAGAGGAAGTTCACCATACATAGCTGTGGGTGCGTCTGCTCTGATTTAAATGCATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555284.1
CDS-3UTR CAA 90 bp GGAAGAGGATGCTGGAATTCCTTACTCTGTCCAGTTGGAATCAATCCAACACATTTCCTGACGTCAGTCTaGTCTTCTACAGAGATAGAT +
Preference number: 5 (lower is better)
Translates to: GRGCWNSLLCPVGINPTHFLTSV*SSTEID
Trigger: ATCTATCTCTGTAGAAGACAAGACTGACGTCAGGAA...ATGTGTTGGATTGATTCCAACTGGACAGAGTAAGGAATTCCAGCATCCTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CCCCTTACAAATGCCTCAGGTATTATGTATATTTGTTTCAGGAATCAGAAGTGGTGGCCACAGCAGGTATaGACTGCAACTTCAGCTACT +
Preference number: 5 (lower is better)
Translates to: PLTNASGIMYICFRNQKWWPQQV*TATSAT
Trigger: AGTAGCTGAAGTTGCAGTCAATACCTGCTGTGGCCA...CCACTTCTGATTCCTGAAACAAATATACATAATACCTGAGGCATTTGTAAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp ATATACCTCATTGATTATCCTATCATCCCCAGTACTTGGAGGGTTAGACCTACTGGTTGTCTGTTTCTGTaGTCTGGTAGCTGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: IYLIDYPIIPSTWRVRPTGCLFL*SGSCSV
Trigger: CACACTACAGCTACCAGACAACAGAAACAGACAACC...AGTAGGTCTAACCCTCCAAGTACTGGGGATGATAGGATAATCAATGAGGTATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAATTTGATGTTACTAAGAGACAACGAGGATACAGAGGGGACTGTCCCTTTTCTCCTTACTCTGTCCAGTaGGAATCAATCCAACACATC +
Preference number: 5 (lower is better)
Translates to: QFDVTKRQRGYRGDCPFSPYSVQ*ESIQHI
Trigger: GATGTGTTGGATTGATTCCAACTGGACAGAGTAAGG...AGAAAAGGGACAGTCCCCTCTGTATCCTCGTTGTCTCTTAGTAACATCAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTACTAGAATTGAGGGTTaGATCTGTGGGGTAACACGA +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTITRIEG*ICGVTR
Trigger: TCGTGTTACCCCACAGATCAAACCCTCAATTCTAGT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTCCCAACAATTTGCTGTaGGGACCTGACTATACATCT +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTIPNNLL*GPDYTS
Trigger: AGATGTATAGTCAGGTCCCAACAGCAAATTGTTGGG...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTATCATTCACTGGATCTaGGGTTCATCCATCCTGACG +
Preference number: 5 (lower is better)
Translates to: SLDLGFIHPDALKFITDIIIHWI*GSSILT
Trigger: CGTCAGGATGGATGAACCCAAGATCCAGTGAATGAT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS TCA 90 bp GAGTTGCACTGCCAAAGTGATCAGGGTCATCAATTTGGAGTTGTTTaGGTTTTTCAACAGCATCAGAGTGTGACTGGGTTTTGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: ELHCQSDQGHQFGVV*VFQQHQSVTGFCLN
Trigger: ATTCAAGCAAAACCCAGTCACACTCTGATGCTGTTGAAAAACTCAAACAACTCCAAATTGATGACCCTGATCACTTTGGCAGTGCAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 90 bp TGCAGCTTCTGGCCATTGAAATGCCACAAAATAAGAGATTTCTCATaGACAACCATCCCTACCCATGAGGATTTGGATTCAAGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: CSFWPLKCHKIRDFS*TTIPTHEDLDSRVL
Trigger: CAGAACTCTTGAATCCAAATCCTCATGGGTAGGGATGGTTGTTCATGAGAAATCTCTTATTTTGTGGCATTTCAATGGCCAGAAGCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 90 bp CCACCCTCTTTGATCCTCTTTTTAAATCTGTGTGTGGAAGGCAACTaGAATATAGAGGATTTGGAAGGTTGTCTGTTTCTGTTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: PPSLILFLNLCVEGN*NIEDLEGCLFLLSG
Trigger: ACCAGACAACAGAAACAGACAACCTTCCAAATCCTCTATATTGCAGTTGCCTTCCACACACAGATTTAAAAAGAGGATCAAAGAGGGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTACTATTTCATTCCCTTaGACGAGGATGTCATTGAGG +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTITISFP*TRMSLR
Trigger: CCTCAATGACATCCTCGTCAAAGGGAATGAAATAGT...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTATCCTAACATCTATTTaGGAGACCTGTCTGTGCCTC +
Preference number: 5 (lower is better)
Translates to: SLDLGFIHPDALKFITDIILTSI*ETCLCL
Trigger: GAGGCACAGACAGGTCTCCAAAATAGATGTTAGGAT...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp TTTATTACAGACATTACAAGAATGGAGGGTGAGGAATGGTGCTTCTCTGTCATCGAGTGTGACTGGGTTTaGCTTGAATCATCAAAACTG +
Preference number: 5 (lower is better)
Translates to: FITDITRMEGEEWCFSVIECDWV*LESSKL
Trigger: CAGTTTTGATGATTCAAGCAAAACCCAGTCACACTC...GATGACAGAGAAGCACCATTCCTCACCCTCCATTCTTGTAATGTCTGTAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CATATCCTTCTCTTCCCTCACCCCTATACTTTAGAACTCTCACACCCAACAATTTCTTCACCACCCTCTTaGATCCTCTTTTTAAATCTG +
Preference number: 5 (lower is better)
Translates to: HILLFPHPYTLELSHPTISSPPS*ILFLNL
Trigger: CAGATTTAAAAAGAGGATCAAAGAGGGTGGTGAAGA...AATTGTTGGGTGTGAGAGTTCTAAAGTATAGGGGTGAGGGAAGAGAAGGATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp CAGTTAAAGAATGGAGACACCTCAAAAAGGTCTAGTAAGACCCAAAGAGGAAATTTCCTGACGTCAGTCTaGTCTTCTACAGAGATAGAT +
Preference number: 5 (lower is better)
Translates to: QLKNGDTSKRSSKTQRGNFLTSV*SSTEID
Trigger: ATCTATCTCTGTAGAAGACAAGACTGACGTCAGGAA...ATTTCCTCTTTGGGTCTTACTAGACCTTTTTGAGGTGTCTCCATTCTTTAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp TCACTGGATCTTGGGTTCATCCATCCTGACGCACTGAAATTTATTACAGACATTTGCAATATAGAGGATTaGGAAGGTTGTCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: SLDLGFIHPDALKFITDICNIED*EGCLFL
Trigger: CAGAAACAGACAACCTTCCAAATCCTCTATATTGCA...AATGTCTGTAATAAATTTCAGTGCGTCAGGATGGATGAACCCAAGATCCAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555447.5
ENST00000649389.1
CDS-3UTR CAA 90 bp AGATGGAGTGAGCGTTCTGACTCTTGGAATCAGAATATAATGTTCCCAACATTAAAACTAAGATTAATTTaGCCTTCCCCTCAACACCCA +
Preference number: 5 (lower is better)
Translates to: RWSERSDSWNQNIMFPTLKLRLI*PSPQHP
Trigger: TGGGTGTTGAGGGGAAGGCAAAATTAATCTTAGTTT...TAATGTTGGGAACATTATATTCTGATTCCAAGAGTCAGAACGCTCACTCCATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS-3UTR CAA 90 bp GGATTCTTAATTAACTTCTCAAGACTGCCTTTGCCAGAAAGTTATGCGAGTGACACATGCAACTGTCTATaGGTCATGAGGTATAAAAAG +
Preference number: 5 (lower is better)
Translates to: GFLINFSRLPLPESYASDTCNCL*VMRYKK
Trigger: CTTTTTATACCTCATGACCAATAGACAGTTGCATGT...GTCACTCGCATAACTTTCTGGCAAAGGCAGTCTTGAGAAGTTAATTAAGAATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS GCA 72 bp GGCTTCTCTGGCCGCGGGATACCCACCCGGCCGCACTaGTCTCGCCACGATCCCTCCCGGCCGCAGCGCCGA +
Preference number: 6 (lower is better)
Translates to: GFSGRGIPTRPH*SRHDPSRPQRR
Trigger: TCGGCGCTGCGGCCGGGAGGGATCGTGGCGAGAGCAGTGCGGCCGGGTGGGTATCCCGCGGCCAGAGAAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557055.5
ENST00000649389.1
CDS CCA 72 bp TCCGCCGAAAGGTCGCCGCGGCAAAGCCGGCTTCTCTaGCCGCGGGATACCCACCCGGCCGCACTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: SAERSPRQSRLL*PRDTHPAALLS
Trigger: CGAGAGCAGTGCGGCCGGGTGGGTATCCCGCGGCCAGAGAAGCCGGCTTTGCCGCGGCGACCTTTCGGCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000557055.5
ENST00000649389.1
CDS CAA 90 bp GGGGTCCAGGCGGTGGGTGCGGGTGGAGGTATGCTCCGAGCATGCTaGAACAGGACTCACTGCCGTCTGCCTGCCTGTCTGCCACTCCGT +
Preference number: 6 (lower is better)
Translates to: GVQAVGAGGGMLRAC*NRTHCRLPACLPLR
Trigger: ACGGAGTGGCAGACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAAGCATGCTCGGAGCATACCTCCACCCGCACCCACCGCCTGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS GCA 72 bp CAGGCGGTGGGTGCGGGTGGAGGTATGCTCCGAGCATaGTTGAACAGGACTCACTGCCGTCTGCCTGCCTGT +
Preference number: 6 (lower is better)
Translates to: QAVGAGGGMLRA*LNRTHCRLPAC
Trigger: ACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAAGCATGCTCGGAGCATACCTCCACCCGCACCCACCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CAA 72 bp GCGGTGGGTGCGGGTGGAGGTATGCTCCGAGCATGCTaGAACAGGACTCACTGCCGTCTGCCTGCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: AVGAGGGMLRAC*NRTHCRLPACL
Trigger: CAGACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAAGCATGCTCGGAGCATACCTCCACCCGCACCCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CAA 90 bp ACAGGACTCACTGCCGTCTGCCTGCCTGTCTGCCACTCCGTCCTCTaGTCAGTTGAGTCAGCCCCAGAAGCCTGGCCACTCGTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: TGLTAVCLPVCHSVL*SVESAPEAWPLVCS
Trigger: GGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGACGGCAGTGAGTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS TCA 72 bp CTGCCTGCCTGTCTGCCACTCCGTCCTCTTGTCAGTTaGGTCAGCCCCAGAAGCCTGGCCACTCGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LPACLPLRPLVS*VSPRSLATRLL
Trigger: GAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CAA 90 bp TCACTGCCGTCTGCCTGCCTGTCTGCCACTCCGTCCTCTTGTCAGTaGAGTCAGCCCCAGAAGCCTGGCCACTCGTCTGCTCCTCAGCAT +
Preference number: 6 (lower is better)
Translates to: SLPSACLSATPSSCQ*SQPQKPGHSSAPQH
Trigger: ATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGACGGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS TCA 72 bp CTGAGTGAGGGGGTCACGATTGGCGGAGAAGCCAGTTaGCATCCTCAGCCAGCTCTGCACCTCCACCTCTGC +
Preference number: 6 (lower is better)
Translates to: LSEGVTIGGEAS*HPQPALHLHLC
Trigger: GCAGAGGTGGAGGTGCAGAGCTGGCTGAGGATGTCAACTGGCTTCTCCGCCAATCGTGACCCCCTCACTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp TCCACCACATGGTTCTCCCCGGAGGAGCTCTCGGACTaGTCTGGGGAAGATGACAGTCCTGGGAGGTGCTCT +
Preference number: 6 (lower is better)
Translates to: STTWFSPEELSD*SGEDDSPGRCS
Trigger: AGAGCACCTCCCAGGACTGTCATCTTCCCCAGACCAGTCCGAGAGCTCCTCCGGGGAGAACCATGTGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp TCTGCCTGCCTGTCTGCCACTCCGTCCTCTTGTCAGTaGAGTCAGCCCCAGAAGCCTGGCCACTCGTCTGCT +
Preference number: 6 (lower is better)
Translates to: SACLSATPSSCQ*SQPQKPGHSSA
Trigger: AGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS TCA 72 bp CCGTCACGAGGCTGGGACCGTGCTGATCCAGGCGGGTaGGCATCTAGTTCAATCCAGGCTACTGGGTCATCA +
Preference number: 6 (lower is better)
Translates to: PSRGWDRADPGG*ASSSIQATGSS
Trigger: TGATGACCCAGTAGCCTGGATTGAACTAGATGCTCACCCGCCTGGATCAGCACGGTCCCAGCCTCGTGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp GGGGCAGGGTGCCCATTCATGGCTGGACTGCTGGCCTaGCAGCTGATGGCCTCCATCTCTACTTCTTCATCT +
Preference number: 6 (lower is better)
Translates to: GAGCPFMAGLLA*QLMASISTSSS
Trigger: AGATGAAGAAGTAGAGATGGAGGCCATCAGCTGGCAGGCCAGCAGTCCAGCCATGAATGGGCACCCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000556280.1
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp AAAGGTGACCCAGCTGGGAAAACGAGCAGAGGTCACTaGAGGGGCAGGGTGCCCATTCATGGCTGGACTGCT +
Preference number: 6 (lower is better)
Translates to: KGDPAGKTSRGH*RGRVPIHGWTA
Trigger: AGCAGTCCAGCCATGAATGGGCACCCTGCCCCTCCAGTGACCTCTGCTCGTTTTCCCAGCTGGGTCACCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000556280.1
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp GCCCATCTTTTCAGAGGAGTCATCCTGCTCCGAGTGGGAATGGTCTaGAGAGCCTCCATCCACCACATGGTTCTCCCCGGAGGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: AHLFRGVILLRVGMV*RASIHHMVLPGGAL
Trigger: GAGAGCTCCTCCGGGGAGAACCATGTGGTGGATGGAGGCTCTCAAGACCATTCCCACTCGGAGCAGGATGACTCCTCTGAAAAGATGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp GGAGATGTGCTGGCCCAGGGTGTGTCATCTTCAAACTaGACCCAGTTGCTGATGGCCGAGGCCAGGTCAGGT +
Preference number: 6 (lower is better)
Translates to: GDVLAQGVSSSN*TQLLMAEARSG
Trigger: ACCTGACCTGGCCTCGGCCATCAGCAACTGGGTTCAGTTTGAAGATGACACACCCTGGGCCAGCACATCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp TTTGACGAGGATGTCATTGAGGCCCAGGCGGCACTCTaGGAGCCCAGACAGGAAACTCAGGATGTGGATCCG +
Preference number: 6 (lower is better)
Translates to: FDEDVIEAQAAL*EPRQETQDVDP
Trigger: CGGATCCACATCCTGAGTTTCCTGTCTGGGCTCGCAGAGTGCCGCCTGGGCCTCAATGACATCCTCGTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp CCGAGCATGCTTGAACAGGACTCACTGCCGTCTGCCTaGCTGTCTGCCACTCCGTCCTCTTGTCAGTTGAGT +
Preference number: 6 (lower is better)
Translates to: PSMLEQDSLPSA*LSATPSSCQLS
Trigger: ACTCAACTGACAAGAGGACGGAGTGGCAGACAGGCAGGCAGACGGCAGTGAGTCCTGTTCAAGCATGCTCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CCA 72 bp TCCGTCCTCTTGTCAGTTGAGTCAGCCCCAGAAGCCTaGCCACTCGTCTGCTCCTCAGCATTGATGAGCTGC +
Preference number: 6 (lower is better)
Translates to: SVLLSVESAPEA*PLVCSSALMSC
Trigger: GCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAAGAGGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS CCA 72 bp GAGGAGGAATTGTCAGTTGAGTCAGCCCCAGAAGCCTaGCCACTCGTCTGCTCCTCAGCATTGATGAGCTGC +
Preference number: 6 (lower is better)
Translates to: EEELSVESAPEA*PLVCSSALMSC
Trigger: GCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGCTTCTGGGGCTGACTCAACTGACAATTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000652748.1
CDS CCA 72 bp CGGCACTCTGCGAGCCCAGACAGGAAACTCAGGATGTaGATCCGTGTCAAGACATGGTGCTGGAGAATCTGG +
Preference number: 6 (lower is better)
Translates to: RHSASPDRKLRM*IRVKTWCWRIW
Trigger: CCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCTGTCTGGGCTCGCAGAGTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp TTCAGAGGAGTCATCCTGCTCCGAGTGGGAATGGTCTaGAGAGCCTCCATCCACCACATGGTTCTCCCCGGA +
Preference number: 6 (lower is better)
Translates to: FRGVILLRVGMV*RASIHHMVLPG
Trigger: TCCGGGGAGAACCATGTGGTGGATGGAGGCTCTCAAGACCATTCCCACTCGGAGCAGGATGACTCCTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp ATAGGGGAGGGCTGTACATCCTGCAGAGTCTCATTCAGGAAAGGGTaGGTTGCCCTCCAAGGTGAAGCCTCAGTTACAGAAGGCGTGCGG +
Preference number: 6 (lower is better)
Translates to: IGEGCTSCRVSFRKG*VALQGEASVTEGVR
Trigger: CCGCACGCCTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTCCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp GTGGTGGTGGGCATGATGTCCTGCCTCAAAACTATTTCATTCCCTTaGACGAGGATGTCATTGAGGCCCAGGCGGCACTCTGCGAGCCCA +
Preference number: 6 (lower is better)
Translates to: VVVGMMSCLKTISFP*TRMSLRPRRHSASP
Trigger: TGGGCTCGCAGAGTGCCGCCTGGGCCTCAATGACATCCTCGTCAAAGGGAATGAAATAGTTTTGAGGCAGGACATCATGCCCACCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp GGGAGGGCTGTACATCCTGCAGAGTCTCATTCAGGAAAGGGTTGGTaGCCCTCCAAGGTGAAGCCTCAGTTACAGAAGGCGTGCGGTTTA +
Preference number: 6 (lower is better)
Translates to: GRAVHPAESHSGKGW*PSKVKPQLQKACGL
Trigger: TAAACCGCACGCCTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp GCACTGAAAGGGTTGATAGGGGAGGGCTGTACATCCTaGAGAGTCTCATTCAGGAAAGGGTTGGTTGCCCTC +
Preference number: 6 (lower is better)
Translates to: ALKGLIGEGCTS*RVSFRKGLVAL
Trigger: GAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTCCCCTATCAACCCTTTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp TACTGCAACCTCCGCTCCCAGGTTCAGCAATTCACATaGCTCAGCCTCCTGAGTGGCTGGGATTACAGAAGT +
Preference number: 6 (lower is better)
Translates to: YCNLRSQVQQFT*LSLLSGWDYRS
Trigger: ACTTCTGTAATCCCAGCCACTCAGGAGGCTGAGGCATGTGAATTGCTGAACCTGGGAGCGGAGGTTGCAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CCA 72 bp GTGCCCAGCTTAATCACCTGTTCCCTCTCTGCTGTGTaGGCCACAGCAGGTTTGGGCTGGTATTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: VPSLITCSLSAV*ATAGLGWYFFF
Trigger: GAAGAAGAAATACCAGCCCAAACCTGCTGTGGCCCACACAGCAGAGAGGGAACAGGTGATTAAGCTGGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp ACATCCTCATCCACACACCCATGGAAACGGCACTCATaGAGCTTGATCCACTTTGTGGTGGTGGTGGGCATG +
Preference number: 6 (lower is better)
Translates to: TSSSTHPWKRHS*SLIHFVVVVGM
Trigger: CATGCCCACCACCACCACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp CTCAAAACTATTTCATTCCCTTTGACGAGGATGTCATaGAGGCCCAGGCGGCACTCTGCGAGCCCAGACAGG +
Preference number: 6 (lower is better)
Translates to: LKTISFPLTRMS*RPRRHSASPDR
Trigger: CCTGTCTGGGCTCGCAGAGTGCCGCCTGGGCCTCAATGACATCCTCGTCAAAGGGAATGAAATAGTTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp TCATCCACACACCCATGGAAACGGCACTCATGGAGCTaGATCCACTTTGTGGTGGTGGTGGGCATGATGTCC +
Preference number: 6 (lower is better)
Translates to: SSTHPWKRHSWS*IHFVVVVGMMS
Trigger: GGACATCATGCCCACCACCACCACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp GGCTTCAGAGGAGAGGTGACTGGTGGTAAAGGGCAGCTGACTTCATaGTCATCAAAGGTGACCCAGCTGGGAAAACGAGCAGAGGTCACT +
Preference number: 6 (lower is better)
Translates to: GFRGEVTGGKGQLTS*SSKVTQLGKRAEVT
Trigger: AGTGACCTCTGCTCGTTTTCCCAGCTGGGTCACCTTTGATGACAATGAAGTCAGCTGCCCTTTACCACCAGTCACCTCTCCTCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000556280.1
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp ATGTCCTGCCTCAAAACTATTTCATTCCCTTTGACGAGGATGTCATaGAGGCCCAGGCGGCACTCTGCGAGCCCAGACAGGAAACTCAGG +
Preference number: 6 (lower is better)
Translates to: MSCLKTISFPLTRMS*RPRRHSASPDRKLR
Trigger: CCTGAGTTTCCTGTCTGGGCTCGCAGAGTGCCGCCTGGGCCTCAATGACATCCTCGTCAAAGGGAATGAAATAGTTTTGAGGCAGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CCGGCACGCATCCAAAGGGTTGAACAGAATGACCCGTaGGTTGTGGAAAACATCCTCATCCACACACCCATG +
Preference number: 6 (lower is better)
Translates to: PARIQRVEQNDP*VVENILIHTPM
Trigger: CATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACGGGTCATTCTGTTCAACCCTTTGGATGCGTGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CAGTCCTCATCCTTTCACGACTGCAGGATGACTTCCTaGCATCCCCAGAGATGGTTCTGCCTTGACACCACA +
Preference number: 6 (lower is better)
Translates to: QSSSFHDCRMTS*HPQRWFCLDTT
Trigger: TGTGGTGTCAAGGCAGAACCATCTCTGGGGATGTCAGGAAGTCATCCTGCAGTCGTGAAAGGATGAGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556280.1
CDS GCA 72 bp GCCTGGCCACTCGTCTGCTCCTCAGCATTGATGAGCTaGAGATCTGTATACGAACATCCAAAGCTAGGACTG +
Preference number: 6 (lower is better)
Translates to: AWPLVCSSALMS*RSVYEHPKLGL
Trigger: CAGTCCTAGCTTTGGATGTTCGTATACAGATCTGCAGCTCATCAATGCTGAGGAGCAGACGAGTGGCCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp CTGTCTCAGCTGTTTCCTGATGAGGTGGAGATGTGCTaGCCCAGGGTGTGTCATCTTCAAACTGAACCCAGT +
Preference number: 6 (lower is better)
Translates to: LSQLFPDEVEMC*PRVCHLQTEPS
Trigger: ACTGGGTTCAGTTTGAAGATGACACACCCTGGGCCAGCACATCTCCACCTCATCAGGAAACAGCTGAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp GAACATCCAAAGCTAGGACTGCTGGTGTCTTCAGAATaGGTGGTCCAGCTGCTCTCAGAAGTCAGAGGGCAT +
Preference number: 6 (lower is better)
Translates to: EHPKLGLLVSSE*VVQLLSEVRGH
Trigger: ATGCCCTCTGACTTCTGAGAGCAGCTGGACCACCCATTCTGAAGACACCAGCAGTCCTAGCTTTGGATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp TGGCTTTTGCCCGTGGTACTGGAAATGGAACTGTTTTaGGAGCGCCTCTCCTGCTCCTCAAAGAAAGCACTG +
Preference number: 6 (lower is better)
Translates to: WLLPVVLEMELF*ERLSCSSKKAL
Trigger: CAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTCCAGTACCACGGGCAAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp GGACACTTTCCCTGCGGAAGTTTTTCACCCACTCACTaGGCACAGGGTAACGGATCATCACATTCTCACAGG +
Preference number: 6 (lower is better)
Translates to: GHFPCGSFSPTH*AQGNGSSHSHR
Trigger: CCTGTGAGAATGTGATGATCCGTTACCCTGTGCCCAGTGAGTGGGTGAAAAACTTCCGCAGGGAAAGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp TACCTCCTCACCTGTCTCAGCTGTTTCCTGATGAGGTaGAGATGTGCTGGCCCAGGGTGTGTCATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: YLLTCLSCFLMR*RCAGPGCVIFK
Trigger: TTTGAAGATGACACACCCTGGGCCAGCACATCTCCACCTCATCAGGAAACAGCTGAGACAGGTGAGGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CAA 72 bp GTACATCCTGCAGAGTCTCATTCAGGAAAGGGTTGGTaGCCCTCCAAGGTGAAGCCTCAGTTACAGAAGGCG +
Preference number: 6 (lower is better)
Translates to: VHPAESHSGKGW*PSKVKPQLQKA
Trigger: CGCCTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp TTTTGGGAGCGCCTCTCCTGCTCCTCAAAGAAAGCACTGAAAGGGTaGATAGGGGAGGGCTGTACATCCTGCAGAGTCTCATTCAGGAAA +
Preference number: 6 (lower is better)
Translates to: FWERLSCSSKKALKG*IGEGCTSCRVSFRK
Trigger: TTTCCTGAATGAGACTCTGCAGGATGTACAGCCCTCCCCTATCAACCCTTTCAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp AAAACATCCTCATCCACACACCCATGGAAACGGCACTCATGGAGCTaGATCCACTTTGTGGTGGTGGTGGGCATGATGTCCTGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: KTSSSTHPWKRHSWS*IHFVVVVGMMSCLK
Trigger: TTTGAGGCAGGACATCATGCCCACCACCACCACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp TCAAACCGGCACGCATCCAAAGGGTTGAACAGAATGACCCGTGAGTaGTGGAAAACATCCTCATCCACACACCCATGGAAACGGCACTCA +
Preference number: 6 (lower is better)
Translates to: SNRHASKGLNRMTRE*WKTSSSTHPWKRHS
Trigger: TGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACGGGTCATTCTGTTCAACCCTTTGGATGCGTGCCGGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CTCTCTTGCCGTTGGTTAATCTGCCAGGCAGAAATCTaGAACCGCACAATTCAAACCCAGGCAGTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: LSCRWLICQAEI*NRTIQTQAVWL
Trigger: GAGCCAGACTGCCTGGGTTTGAATTGTGCGGTTTCAGATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000554710.1
ENST00000555447.5
ENST00000557055.5
ENST00000649389.1
CDS TCA 72 bp AGGAAAGGGTGGCTCTTCATTGAAGGAGACCCATTCTaGCTGGTGGGTGGCAATCACATGGTCCAAAGTCGT +
Preference number: 6 (lower is better)
Translates to: RKGWLFIEGDPF*LVGGNHMVQSR
Trigger: ACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CAGCTGATGGCCTCCATCTCTACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCATTGGGAGCAGAGGCC +
Preference number: 6 (lower is better)
Translates to: QLMASISTSSSS*SEEELSLGAEA
Trigger: GGCCTCTGCTCCCAATGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGTAGAGATGGAGGCCATCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649389.1
CDS GCA 72 bp TGTAGACAGATCAGCCTCTCTTGCCGTTGGTTAATCTaGCAGGCAGAAATAGTTCCACATGGCTGGGGAAGC +
Preference number: 6 (lower is better)
Translates to: CRQISLSCRWLI*QAEIVPHGWGS
Trigger: GCTTCCCCAGCCATGTGGAACTATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGTCTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 72 bp ATTAAACCAGATGAGAACTCCGTCTGCTCTCCCCTATaGGACCAGTGCTTCAGGGTTAGGGGGCAGATGAAA +
Preference number: 6 (lower is better)
Translates to: IKPDENSVCSPL*DQCFRVRGQMK
Trigger: TTTCATCTGCCCCCTAACCCTGAAGCACTGGTCGCATAGGGGAGAGCAGACGGAGTTCTCATCTGGTTTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 72 bp TGGGGTGAACAAATGGAGTTGGAAGCATTAGCCAGATaGTTCCCAAGGCTACCTGGTAGCTGTAGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: WGEQMELEALAR*FPRLPGSCSVQ
Trigger: CTGCACACTACAGCTACCAGGTAGCCTTGGGAAGCATCTGGCTAATGCTTCCAACTCCATTTGTTCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000555284.1
ENST00000652748.1
CDS CCA 72 bp GGTGGCTCTTCATTGAAGGAGACCCATTCTGACTGGTaGGTGGCAATCACATGGTCCAAAGTCGTCATGCTA +
Preference number: 6 (lower is better)
Translates to: GGSSLKETHSDW*VAITWSKVVML
Trigger: TAGCATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGAGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp AAGGGTGGCTCTTCATTGAAGGAGACCCATTCTGACTaGTGGGTGGCAATCACATGGTCCAAAGTCGTCATG +
Preference number: 6 (lower is better)
Translates to: KGGSSLKETHSD*WVAITWSKVVM
Trigger: CATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTTCAATGAAGAGCCACCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp GCTGTACATCCTGCAGAGTCTCATTCAGGAAAGGGTTaGTTGCCCTCCAAGGTGAAGCCTCAGTTACAGAAG +
Preference number: 6 (lower is better)
Translates to: AVHPAESHSGKG*LPSKVKPQLQK
Trigger: CTTCTGTAACTGAGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp TGGTTAATCTGCCAGGCAGAAATAGTTCCACATGGCTaGGGAAGCCTCACAATCATGGCAGAAGGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: WLICQAEIVPHG*GSLTIMAEGKE
Trigger: CTCCTTCCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTATTTCTGCCTGGCAGATTAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CCA 72 bp CCGTTGGTTAATCTGCCAGGCAGAAATAGTTCCACATaGCTGGGGAAGCCTCACAATCATGGCAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: PLVNLPGRNSST*LGKPHNHGRRE
Trigger: TTCCCTTCTGCCATGATTGTGAGGCTTCCCCAGCCATGTGGAACTATTTCTGCCTGGCAGATTAACCAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CAA 72 bp TTGTCCGGCAGTCGGTTTATCCTCCACACAATGGAGTaGAAGGCATGCTCGTACTTGGCAGTTCCCAGAGTT +
Preference number: 6 (lower is better)
Translates to: LSGSRFILHTME*KACSYLAVPRV
Trigger: AACTCTGGGAACTGCCAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAGGATAAACCGACTGCCGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553821.2
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp CCACTTCGCCCTGCTCCATCCACGAGATGTACTTTTTaGCCTCGTGAGTTGTTTTCCTTAAGCAGAGTCCCC +
Preference number: 6 (lower is better)
Translates to: PLRPAPSTRCTF*PRELFSLSRVP
Trigger: GGGGACTCTGCTTAAGGAAAACAACTCACGAGGCAAAAAAGTACATCTCGTGGATGGAGCAGGGCGAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554710.1
CDS CAA 72 bp GGCTGTACATCCTGCAGAGTCTCATTCAGGAAAGGGTaGGTTGCCCTCCAAGGTGAAGCCTCAGTTACAGAA +
Preference number: 6 (lower is better)
Translates to: GCTSCRVSFRKG*VALQGEASVTE
Trigger: TTCTGTAACTGAGGCTTCACCTTGGAGGGCAACCAACCCTTTCCTGAATGAGACTCTGCAGGATGTACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp GGCATGATGTCCTGCCTCAAAACTATTTCATTCCCTTaGACGAGGATGTCATTGAGGCCCAGGCGGCACTCT +
Preference number: 6 (lower is better)
Translates to: GMMSCLKTISFP*TRMSLRPRRHS
Trigger: AGAGTGCCGCCTGGGCCTCAATGACATCCTCGTCAAAGGGAATGAAATAGTTTTGAGGCAGGACATCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp GCTGAGTTTTTGTCCGGCAGTCGGTTTATCCTCCACACAATGGAGTaGAAGGCATGCTCGTACTTGGCAGTTCCCAGAGTTACTCTCATG +
Preference number: 6 (lower is better)
Translates to: AEFLSGSRFILHTME*KACSYLAVPRVTLM
Trigger: CATGAGAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAGGATAAACCGACTGCCGGACAAAAACTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553821.2
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp ACACCCTATCATGACTCTGGGATCAGGATTCCTTGCCGCAAGGCTTaGTCACTGCACTCCACACTCCTTGGGATTTTCCATTTCATCTCC +
Preference number: 6 (lower is better)
Translates to: TPYHDSGIRIPCRKA*SLHSTLLGIFHFIS
Trigger: GGAGATGAAATGGAAAATCCCAAGGAGTGTGGAGTGCAGTGACAAAGCCTTGCGGCAAGGAATCCTGATCCCAGAGTCATGATAGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553821.2
CDS CAA 90 bp GGAATCTCTTTGGCTTTTGCCCGTGGTACTGGAAATGGAACTGTTTaGGGAGCGCCTCTCCTGCTCCTCAAAGAAAGCACTGAAAGGGTT +
Preference number: 6 (lower is better)
Translates to: GISLAFARGTGNGTV*GAPLLLLKESTERV
Trigger: AACCCTTTCAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTCCAGTACCACGGGCAAAAGCCAAAGAGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp AGTCGGTTTATCCTCCACACAATGGAGTTGAAGGCATGCTCGTACTaGGCAGTTCCCAGAGTTACTCTCATGACAGGCTCAGAGCCAGAA +
Preference number: 6 (lower is better)
Translates to: SRFILHTMELKACSY*AVPRVTLMTGSEPE
Trigger: TTCTGGCTCTGAGCCTGTCATGAGAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAGGATAAACCGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CAGCTGATGGCCTCCATCTCTACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCAGTTGAGTCAGCCCCA +
Preference number: 6 (lower is better)
Translates to: QLMASISTSSSS*SEEELSVESAP
Trigger: TGGGGCTGACTCAACTGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGTAGAGATGGAGGCCATCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000652748.1
CDS TCA 72 bp GCCGGGGTTCTGAAATCTCATGACAGATCTCCAGCTTaGACTCACGGAATGGTTTTTCTAGGCCCTGCTCAT +
Preference number: 6 (lower is better)
Translates to: AGVLKSHDRSPA*THGMVFLGPAH
Trigger: ATGAGCAGGGCCTAGAAAAACCATTCCGTGAGTTCAAGCTGGAGATCTGTCATGAGATTTCAGAACCCCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp TTCAAGGTAGTTGAGGCCAACTGTGCTCAAGTCCATTaGCAACACTGGCAGATCCATGAGACGGTCCTGAAC +
Preference number: 6 (lower is better)
Translates to: FKVVEANCAQVH*QHWQIHETVLN
Trigger: GTTCAGGACCGTCTCATGGATCTGCCAGTGTTGTCAATGGACTTGAGCACAGTTGGCCTCAACTACCTTGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp GTACTGGAAATGGAACTGTTTTGGGAGCGCCTCTCCTaGTCCTCAAAGAAAGCACTGAAAGGGTTGATAGGG +
Preference number: 6 (lower is better)
Translates to: VLEMELFWERLS*SSKKALKGLIG
Trigger: CCCTATCAACCCTTTCAGTGCTTTCTTTGAGGAGCAGGAGAGGCGCTCCCAAAACAGTTCCATTTCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp AAGGAGACCCATTCTGACTGGTGGGTGGCAATCACATaGTCCAAAGTCGTCATGCTAAAAAGGCACTGGTCA +
Preference number: 6 (lower is better)
Translates to: KETHSDWWVAIT*SKVVMLKRHWS
Trigger: TGACCAGTGCCTTTTTAGCATGACGACTTTGGACCATGTGATTGCCACCCACCAGTCAGAATGGGTCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000555226.1
ENST00000555447.5
ENST00000557055.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp GACAGGAAACTCAGGATGTGGATCCGTGTCAAGACATaGTGCTGGAGAATCTGGTTGTCTCCTTTGCTCACA +
Preference number: 6 (lower is better)
Translates to: DRKLRMWIRVKT*CWRIWLSPLLT
Trigger: TGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp CGTGAGTTGTGGAAAACATCCTCATCCACACACCCATaGAAACGGCACTCATGGAGCTTGATCCACTTTGTG +
Preference number: 6 (lower is better)
Translates to: RELWKTSSSTHP*KRHSWSLIHFV
Trigger: CACAAAGTGGATCAAGCTCCATGAGTGCCGTTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp GCATCCAAAGGGTTGAACAGAATGACCCGTGAGTTGTaGAAAACATCCTCATCCACACACCCATGGAAACGG +
Preference number: 6 (lower is better)
Translates to: ASKGLNRMTREL*KTSSSTHPWKR
Trigger: CCGTTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACGGGTCATTCTGTTCAACCCTTTGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp ATCCTCCACACAATGGAGTTGAAGGCATGCTCGTACTaGGCAGTTCCCAGAGTTACTCTCATGACAGGCTCA +
Preference number: 6 (lower is better)
Translates to: ILHTMELKACSY*AVPRVTLMTGS
Trigger: TGAGCCTGTCATGAGAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553821.2
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 90 bp CTCAGGATGTGGATCCGTGTCAAGACATGGTGCTGGAGAATCTGGTaGTCTCCTTTGCTCACAATGCCAGAGAATTCATCTCTGACATCC +
Preference number: 6 (lower is better)
Translates to: LRMWIRVKTWCWRIW*SPLLTMPENSSLTS
Trigger: GGATGTCAGAGATGAATTCTCTGGCATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp TTAAATCAGAGCAGACGCACCCACAGCTATGTATGGTaGACTTCCTCTAAGGCAGTAAGAGGTTACCAGGCG +
Preference number: 6 (lower is better)
Translates to: LNQSRRTHSYVW*TSSKAVRGYQA
Trigger: CGCCTGGTAACCTCTTACTGCCTTAGAGGAAGTTCACCATACATAGCTGTGGGTGCGTCTGCTCTGATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555284.1
CDS GCA 72 bp AGTCGGTTTATCCTCCACACAATGGAGTTGAAGGCATaGTCGTACTTGGCAGTTCCCAGAGTTACTCTCATG +
Preference number: 6 (lower is better)
Translates to: SRFILHTMELKA*SYLAVPRVTLM
Trigger: CATGAGAGTAACTCTGGGAACTGCCAAGTACGAGCATGCCTTCAACTCCATTGTGTGGAGGATAAACCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553821.2
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp AGGAAACTCAGGATGTGGATCCGTGTCAAGACATGGTaGTGGAGAATCTGGTTGTCTCCTTTGCTCACAATG +
Preference number: 6 (lower is better)
Translates to: RKLRMWIRVKTW*WRIWLSPLLTM
Trigger: CATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS GCA 72 bp GGGCAGTACTCAGAATGTAGACAGATCAGCCTCTCTTaGCGTTGGTTAATCTGCCAGGCAGAAATAGTTCCA +
Preference number: 6 (lower is better)
Translates to: GQYSECRQISLS*RWLICQAEIVP
Trigger: TGGAACTATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGTCTACATTCTGAGTACTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 72 bp ACAAGTTACAGAATTAAACCAGATGAGAACTCCGTCTaGTCTCCCCTATGCGACCAGTGCTTCAGGGTTAGG +
Preference number: 6 (lower is better)
Translates to: TSYRIKPDENSV*SPLCDQCFRVR
Trigger: CCTAACCCTGAAGCACTGGTCGCATAGGGGAGAGCAGACGGAGTTCTCATCTGGTTTAATTCTGTAACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CCA 72 bp AAACTCAGGATGTGGATCCGTGTCAAGACATGGTGCTaGAGAATCTGGTTGTCTCCTTTGCTCACAATGCCA +
Preference number: 6 (lower is better)
Translates to: KLRMWIRVKTWC*RIWLSPLLTMP
Trigger: TGGCATTGTGAGCAAAGGAGACAACCAGATTCTCCAGCACCATGTCTTGACACGGATCCACATCCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CAA 72 bp CACGCATCCAAAGGGTTGAACAGAATGACCCGTGAGTaGTGGAAAACATCCTCATCCACACACCCATGGAAA +
Preference number: 6 (lower is better)
Translates to: HASKGLNRMTRE*WKTSSSTHPWK
Trigger: TTTCCATGGGTGTGTGGATGAGGATGTTTTCCACAACTCACGGGTCATTCTGTTCAACCCTTTGGATGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CAGCTGATGGCCTCCATCTCTACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCTTCACGGATTTCAGTC +
Preference number: 6 (lower is better)
Translates to: QLMASISTSSSS*SEEELSSRISV
Trigger: GACTGAAATCCGTGAAGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGTAGAGATGGAGGCCATCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556280.1
CDS GCA 72 bp TCCAGGCTACTGGGTCATCATCAGGTAGAGTTGCACTaGCAAAGTGATCAGGGTCATCAATTTGGAGTTGTT +
Preference number: 6 (lower is better)
Translates to: SRLLGHHQVELH*QSDQGHQFGVV
Trigger: AACAACTCCAAATTGATGACCCTGATCACTTTGGCAGTGCAACTCTACCTGATGATGACCCAGTAGCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS CCA 72 bp TACTCAGAATGTAGACAGATCAGCCTCTCTTGCCGTTaGTTAATCTGCCAGGCAGAAATAGTTCCACATGGC +
Preference number: 6 (lower is better)
Translates to: YSECRQISLSCR*LICQAEIVPHG
Trigger: GCCATGTGGAACTATTTCTGCCTGGCAGATTAACCAACGGCAAGAGAGGCTGATCTGTCTACATTCTGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS CAA 72 bp GTTCAATCCAGGCTACTGGGTCATCATCAGGTAGAGTaGCACTGCCAAAGTGATCAGGGTCATCAATTTGGA +
Preference number: 6 (lower is better)
Translates to: VQSRLLGHHQVE*HCQSDQGHQFG
Trigger: TCCAAATTGATGACCCTGATCACTTTGGCAGTGCAACTCTACCTGATGATGACCCAGTAGCCTGGATTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp TCTGCCATTCTCATCATAGTTTTGAAGCCGGGGTTCTaGAATCTCATGACAGATCTCCAGCTTGAACTCACG +
Preference number: 6 (lower is better)
Translates to: SAILIIVLKPGF*NLMTDLQLELT
Trigger: CGTGAGTTCAAGCTGGAGATCTGTCATGAGATTTCAGAACCCCGGCTTCAAAACTATGATGAGAATGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp GAAGGCGTGCGGTTTAAAGAGGAAATATCCAGCTTCTaGACTTTGGAGAAGTTCATCAAAGTGCTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: EGVRFKEEISSF*TLEKFIKVLLG
Trigger: TCCCAAGAGCACTTTGATGAACTTCTCCAAAGTTCAGAAGCTGGATATTTCCTCTTTAAACCGCACGCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp CAGCTGATGGCCTCCATCTCTACTTCTTCATCTTCTTaGAGCGAGGAGGAATTGTCTAAAAGGAAAAGGAGA +
Preference number: 6 (lower is better)
Translates to: QLMASISTSSSS*SEEELSKRKRR
Trigger: TCTCCTTTTCCTTTTAGACAATTCCTCCTCGCTTCAAGAAGATGAAGAAGTAGAGATGGAGGCCATCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555284.1
CDS CAA 72 bp AATCTGTGTGTGGAAGGCAACTGCAATATAGAGGATTaGGAAGGTTGTCTGTTTCTGTTGTCTGGTAGCTGT +
Preference number: 6 (lower is better)
Translates to: NLCVEGNCNIED*EGCLFLLSGSC
Trigger: ACAGCTACCAGACAACAGAAACAGACAACCTTCCAAATCCTCTATATTGCAGTTGCCTTCCACACACAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
CDS CAA 90 bp CTCTTTTTAAATCTGTGTGTGGAAGGCAACTGCAATATAGAGGATTaGGAAGGTTGTCTGTTTCTGTTGTCTGGTAGCTGTAGTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LFLNLCVEGNCNIED*EGCLFLLSGSCSVQ
Trigger: CTGCACACTACAGCTACCAGACAACAGAAACAGACAACCTTCCAAATCCTCTATATTGCAGTTGCCTTCCACACACAGATTTAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
CDS TCA 72 bp TGCCAAAGTGATCAGGGTCATCAATTTGGAGTTGTTTaGGTTTTTCAACAGCATCAGAGTGTGACTGGGTTT +
Preference number: 6 (lower is better)
Translates to: CQSDQGHQFGVV*VFQQHQSVTGF
Trigger: AAACCCAGTCACACTCTGATGCTGTTGAAAAACTCAAACAACTCCAAATTGATGACCCTGATCACTTTGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000555284.1
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
ENST00000652748.1
CDS TCA 72 bp ATGATGCCAGTGGAACTTCCAAAGAAGCATTCCACCTaGTCTTCACCACCCTCTTTGATCCTCTTTTTAAAT +
Preference number: 6 (lower is better)
Translates to: MMPVELPKKHST*SSPPSLILFLN
Trigger: ATTTAAAAAGAGGATCAAAGAGGGTGGTGAAGATCAGGTGGAATGCTTCTTTGGAAGTTCCACTGGCATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
CDS TCA 72 bp CCATCCCTACCCATGAGGATTTGGATTCAAGAGTTCTaGAGTGTGAGAATATCCATGTTTAACAAATCCTAT +
Preference number: 6 (lower is better)
Translates to: PSLPMRIWIQEF*SVRISMFNKSY
Trigger: ATAGGATTTGTTAAACATGGATATTCTCACACTTCAGAACTCTTGAATCCAAATCCTCATGGGTAGGGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555226.1
CDS GCA 72 bp TTGATCCTCTTTTTAAATCTGTGTGTGGAAGGCAACTaGAATATAGAGGATTTGGAAGGTTGTCTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: LILFLNLCVEGN*NIEDLEGCLFL
Trigger: CAGAAACAGACAACCTTCCAAATCCTCTATATTGCAGTTGCCTTCCACACACAGATTTAAAAAGAGGATCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000555447.5
ENST00000614646.4
ENST00000649389.1
CDS TCA 72 bp GACAAAACATCACCTTGGTCTATTACAAAGCTATCTTaGCACTTAAGCTACATTTCAATTAGTCAGAGGTGC +
Preference number: 6 (lower is better)
Translates to: DKTSPWSITKLS*HLSYISISQRC
Trigger: GCACCTCTGACTAATTGAAATGTAGCTTAAGTGTCAAGATAGCTTTGTAATAGACCAAGGTGATGTTTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556280.1