RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STON1 (Homo sapiens)

Ensembl gene IDs: ENSG00000243244

Ensembl transcript IDs: ENST00000404752.6, ENST00000406226.1, ENST00000444932.1, ENST00000484110.1, ENST00000649748.1

Found 462 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCAACCTGGATGTTGTAGCAAGCTCGCTGCTGAACATGTTTCTGTaGCTGGACATCACTCTCCACTCCCAGAGACCTGACCTCTGTCCT +
Preference number: 1 (lower is better)
Translates to: FNLDVVASSLLNMFL*LDITLHSQRPDLCP
Trigger: AGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGTTCAGCAGCGAGCTTGCTACAACATCCAGGTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR CCA 90 bp GTAACTGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTaGAAGTCTGCTCATTTGACTCCAAAATGGTCAAACTCACAATGG +
Preference number: 1 (lower is better)
Translates to: VTGKVTRLVTNWSTP*KSAHLTPKWSNSQW
Trigger: CCATTGTGAGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCAGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR TCA 90 bp CTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTaGCAAGTGGGCTGTCATCATAAACTCTTGCTACTCCTACTGAGT +
Preference number: 1 (lower is better)
Translates to: LYSSRTWCGFGELHI*QVGCHHKLLLLLLS
Trigger: ACTCAGTAGGAGTAGCAAGAGTTTATGATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR TCA 90 bp ATATTTGACAAGTGGGCTGTCATCATAAACTCTTGCTACTCCTACTaGGTTATGCAGTCACCAATTTTATCTGGGTCTTCTCCATCGATT +
Preference number: 1 (lower is better)
Translates to: IFDKWAVIINSCYSY*VMQSPILSGSSPSI
Trigger: AATCGATGGAGAAGACCCAGATAAAATTGGTGACTGCATAACTCAGTAGGAGTAGCAAGAGTTTATGATGACAGCCCACTTGTCAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR TCA 90 bp ATCTGCACAAATCATCTACCCATGAATTCATTTACACAGTTAATATaGTCCTGTAACTGGAAAGGTGACCAGACTAGTCACAAACTGGTC +
Preference number: 1 (lower is better)
Translates to: ICTNHLPMNSFTQLI*SCNWKGDQTSHKLV
Trigger: GACCAGTTTGTGACTAGTCTGGTCACCTTTCCAGTTACAGGATCATATTAACTGTGTAAATGAATTCATGGGTAGATGATTTGTGCAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CCA 90 bp AGTAATTCAAAAGCACAGATACTTCCAGATCTACATTTTAGCCTGTaGTTTCAACATCATTCTACACCTAGCCACATTTCAGAGGCAAGA +
Preference number: 1 (lower is better)
Translates to: SNSKAQILPDLHFSL*FQHHSTPSHISEAR
Trigger: TCTTGCCTCTGAAATGTGGCTAGGTGTAGAATGATGTTGAAACCACAGGCTAAAATGTAGATCTGGAAGTATCTGTGCTTTTGAATTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCAC +
Preference number: 2 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNPLPET*PLSLRH
Trigger: GTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGG...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR-3UTR CCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGATTAATCCCAGAACTTTaGGAGGCCGAGGCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRLIPEL*EAEAGG
Trigger: TCCACCAGCCTCGGCCTCCCAAAGTTCTGGGATTAA...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR GCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAAAAAATCATACTGGCTaGGGGGTCACACAACGAGTA +
Preference number: 2 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRKNHTG*GVTQRV
Trigger: TACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTT...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATTCTGTAGTCACATCTaGCCTTCTGCCAGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSFCSHI*PSASSE
Trigger: CTCAGAACTGGCAGAAGGTCAGATGTGACTACAGAA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR GCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGACCAACCATCACCTATTaGATTCTTTGCCTTTACAGT +
Preference number: 2 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRPTITY*ILCLYS
Trigger: ACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGG...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAATCCTAATCAGACTGTaGGTTCTTTGTGGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSILIRL*VLCGQD
Trigger: ATCCTGCCCACAAAGAACTCACAGTCTGATTAGGAT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR CCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCACATGTTTCTGTGGCTaGACATCACTCTCCACTCCC +
Preference number: 2 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSTCFCG*TSLSTP
Trigger: GGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGT...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACGGTTTATGTCTCCTTTaGTTCCCTTACCCTCTAGTA +
Preference number: 2 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNGLCLL*FPYPLV
Trigger: TACTAGAGGGTAAGGGAATCAAAGGAGACATAAACC...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACGGTGAATTACATATTTaGCAAGTGGGCTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNGELHI*QVGCHH
Trigger: ATGATGACAGCCCACTTGTCAAATATGTAATTCACC...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCAGAGATGGGAAGAAATaGAGACGGCACCTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIRDGKK*RRHLSN
Trigger: ATTACTGAGGTGCCGTCTTCATTTCTTCCCATCTCT...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR CCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCAATCAAAAATCATACTaGCTGCGGGGTCACACAACG +
Preference number: 2 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNINQKSY*LRGHTT
Trigger: CGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATT...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGGTCACCAATTTTATCTaGGTCTTCTCCATCGATTTT +
Preference number: 2 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRVTNFI*VFSIDF
Trigger: AAAATCGATGGAGAAGACCCAGATAAAATTGGTGAC...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR CAA 90 bp TGTAACTGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTaGGAAGTCTGCTCATTTGACTCCAAAATGGTCAAACTCACAATG +
Preference number: 2 (lower is better)
Translates to: CNWKGDQTSHKLVNS*EVCSFDSKMVKLTM
Trigger: CATTGTGAGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCAGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 90 bp CAATTATGCTGTAACACCCTGCTGTTAATGCTATCAGCTTCTGCATaGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATT +
Preference number: 2 (lower is better)
Translates to: QLCCNTLLLMLSASA*PQTIHLGFSPAFAI
Trigger: AATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAGCATTAACAGCAGGGTGTTACAGCATAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 90 bp ACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATTaGACTCCAAAATGGTCAAACTCACAATGGAGTGATCTAAGCAAA +
Preference number: 2 (lower is better)
Translates to: TRLVTNWSTPWKSAH*TPKWSNSQWSDLSK
Trigger: TTTGCTTAGATCACTCCATTGTGAGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACGGTGAATTACATATTTaGCAAGTGGGCTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHGELHI*QVGCHH
Trigger: ATGATGACAGCCCACTTGTCAAATATGTAATTCACC...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGGTGAATTACATATTTaGCAAGTGGGCTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVGELHI*QVGCHH
Trigger: ATGATGACAGCCCACTTGTCAAATATGTAATTCACC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTAGAGATGGGAAGAAATaGAGACGGCACCTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFRDGKK*RRHLSN
Trigger: ATTACTGAGGTGCCGTCTTCATTTCTTCCCATCTCT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR GCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTAAAAATCATACTGGCTaGGGGGTCACACAACGAGTA +
Preference number: 2 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFKNHTG*GVTQRV
Trigger: TACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 90 bp TCTGTAGTCACATCTGACCTTCTGCCAGTTCTGAGGTCAGAAGAATaGAATAAGCCTCCCCTCCCTACACAGAATGTTAATTTAACATTA +
Preference number: 2 (lower is better)
Translates to: SVVTSDLLPVLRSEE*NKPPLPTQNVNLTL
Trigger: TAATGTTAAATTAACATTCTGTGTAGGGAGGGGAGGCTTATTCAATTCTTCTGACCTCAGAACTGGCAGAAGGTCAGATGTGACTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTGGTTTATGTCTCCTTTaGTTCCCTTACCCTCTAGTA +
Preference number: 2 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFGLCLL*FPYPLV
Trigger: TACTAGAGGGTAAGGGAATCAAAGGAGACATAAACC...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 90 bp CTGCTGTTAATGCTATCAGCTTCTGCATTGCCACAGACAATCCATTaGGGCTTTAGTCCAGCTTTTGCTATTATATTGTCAAGACTGAAT +
Preference number: 2 (lower is better)
Translates to: LLLMLSASALPQTIH*GFSPAFAIILSRLN
Trigger: ATTCAGTCTTGACAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAGCATTAACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTTGGTGTGGTTTCGGTaGATTACATATTTGACAAGT +
Preference number: 2 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKLVWFR*ITYLTS
Trigger: ACTTGTCAAATATGTAATTCACCGAAACCACACCAA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGAGGAATCCTGCCAAGTaGAAGGAAATATGTCTTAGT +
Preference number: 2 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILRNPAK*KEICLS
Trigger: ACTAAGACATATTTCCTTTCACTTGGCAGGATTCCT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGAGAGATGGGAAGAAATaGAGACGGCACCTCAGTAAT +
Preference number: 2 (lower is better)
Translates to: SFQPTITYCILCLYSKIMRDGKK*RRHLSN
Trigger: ATTACTGAGGTGCCGTCTTCATTTCTTCCCATCTCT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR TCA 90 bp ATCTGGGTCTTCTCCATCGATTTTAATCCACTTCTTTTCTATTTCAACCTGGATGGTGAATTACATATTTaGCAAGTGGGCTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: IWVFSIDFNPLLFYFNLDGELHI*QVGCHH
Trigger: ATGATGACAGCCCACTTGTCAAATATGTAATTCACC...ATCCAGGTTGAAATAGAAAAGAAGTGGATTAAAATCGATGGAGAAGACCCAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCTACATTTTAGCCTGTaGTTTCAACATCATTCTACA +
Preference number: 2 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFLHFSL*FQHHST
Trigger: TGTAGAATGATGTTGAAACCACAGGCTAAAATGTAG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR GCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCCCAACCATCACCTATTaGATTCTTTGCCTTTACAGT +
Preference number: 2 (lower is better)
Translates to: YLRILIDVRINNYAVTPCPTITY*ILCLYS
Trigger: ACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGG...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR GCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCATACACACACAGATTTaGCCTACTCTACATCAACAG +
Preference number: 2 (lower is better)
Translates to: YLRILIDVRINNYAVTPCIHTQI*PTLHQQ
Trigger: CTGTTGATGTAGAGTAGGGCAAATCTGTGTGTGTAT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR CCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGCTACATTTTAGCCTGTaGTTTCAACATCATTCTACA +
Preference number: 2 (lower is better)
Translates to: SFQPTITYCILCLYSKIMLHFSL*FQHHST
Trigger: TGTAGAATGATGTTGAAACCACAGGCTAAAATGTAG...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR TCA 72 bp ATCTTGAGATGTCCTGAAGGCCCGGTGGCTTGTGAGTaGATAACCTGGGCAGGGAGGTACCCACAGATACTA +
Preference number: 3 (lower is better)
Translates to: ILRCPEGPVACE*ITWAGRYPQIL
Trigger: TAGTATCTGTGGGTACCTCCCTGCCCAGGTTATTCACTCACAAGCCACCGGGCCTTCAGGACATCTCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CCA 72 bp CCTGTAACTGGAAAGGTGACCAGACTAGTCACAAACTaGTCAACTCCTTGGAAGTCTGCTCATTTGACTCCA +
Preference number: 3 (lower is better)
Translates to: PVTGKVTRLVTN*STPWKSAHLTP
Trigger: TGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCAGTTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATACTCAGATTCCATTTaGAAAGGAATCCTGCCAAGT +
Preference number: 3 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSYSDSI*KGILPS
Trigger: ACTTGGCAGGATTCCTTTCAAAATGGAATCTGAGTA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR TCA 72 bp TCCAGCTTTTGCTATTATATTGTCAAGACTGAATCTTaGGATGTCCTGAAGGCCCGGTGGCTTGTGAGTGAA +
Preference number: 3 (lower is better)
Translates to: SSFCYYIVKTES*DVLKARWLVSE
Trigger: TTCACTCACAAGCCACCGGGCCTTCAGGACATCTCAAGATTCAGTCTTGACAATATAATAGCAAAAGCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR TCA 72 bp AGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTaGCAAGTGGGCTGTCATCATAAACTCTTGCTACTC +
Preference number: 3 (lower is better)
Translates to: SRTWCGFGELHI*QVGCHHKLLLL
Trigger: GAGTAGCAAGAGTTTATGATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR GCA 72 bp CAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTaGTCATTTGACTCCAAAATGGTCAAACTCACAATG +
Preference number: 3 (lower is better)
Translates to: QTSHKLVNSLEV*SFDSKMVKLTM
Trigger: CATTGTGAGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR TCA 72 bp AAGTGGGCTGTCATCATAAACTCTTGCTACTCCTACTaGGTTATGCAGTCACCAATTTTATCTGGGTCTTCT +
Preference number: 3 (lower is better)
Translates to: KWAVIINSCYSY*VMQSPILSGSS
Trigger: AGAAGACCCAGATAAAATTGGTGACTGCATAACTCAGTAGGAGTAGCAAGAGTTTATGATGACAGCCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444932.1
3UTR-3UTR CAA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTACTCAGATTCCATTTaGAAAGGAATCCTGCCAAGT +
Preference number: 3 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFYSDSI*KGILPS
Trigger: ACTTGGCAGGATTCCTTTCAAAATGGAATCTGAGTA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTGGTTTATGTCTCCTTaGATTCCCTTACCCTCTAGT +
Preference number: 3 (lower is better)
Translates to: YLRILIDVRINNYAVTPCWFMSP*IPLPSS
Trigger: ACTAGAGGGTAAGGGAATCAAAGGAGACATAAACCA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAACTTCACTGGGACTGTaGGCAGCATCAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRTSLGL*AASVSA
Trigger: GGCCGAAACTGATGCTGCCCACAGTCCCAGTGAAGT...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGACATCCGGATTTTGGCTaGCTCCTGAAGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRHPDFG*LLKSVW
Trigger: CCACACACTCTTCAGGAGTCAGCCAAAATCCGGATG...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACCCTGACCTCTGTCCTTaGGGCACAGGTGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNPDLCP*GTGVRH
Trigger: GTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGG...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGGGCTGGTGGATCACCTaGGGTCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRGWWIT*GQEFET
Trigger: AGTCTCGAACTCCTGACCTCAGGTGATCCACCAGCC...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAAGGCCCGGTGGCTTGTaGGTGAATAACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSRPGGL*VNNLGR
Trigger: CCTGCCCAGGTTATTCACTCACAAGCCACCGGGCCT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAAGGGCCTTGATCCACTaGGATGGGACAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRRALIH*DGTGKC
Trigger: ACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCT...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTTTGGGCCAGTGTGGTaGCCCCCGCGGCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFFGPVW*PPRLWP
Trigger: GGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS-3UTR TCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCCCTGACCTCTGTCCTTaGGGCACAGGTGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIPDLCP*GTGVRH
Trigger: GTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGG...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIPLPET*PLSLRH
Trigger: GTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGG...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAAGGCGGAGGTTGCAGTaGGCCAAGATGACACACTGC +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSRRRLQ*AKMTHC
Trigger: GCAGTGTGTCATCTTGGCTCACTGCAACCTCCGCCT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAGGCTGGTGGATCACCTaGGGTCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSGWWIT*GQEFET
Trigger: AGTCTCGAACTCCTGACCTCAGGTGATCCACCAGCC...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACATATTTGGGCCAGTGTaGTGGCCCCCGCGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHIFGPV*WPPRLW
Trigger: CCACAGCCGCGGGGGCCACCACACTGGCCCAAATAT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAGAGAGGAGTGCTGCTaGTGGAGGAAGATCCACTGG +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRREECC*WRKIHW
Trigger: CCAGTGGATCTTCCTCCACCAGCAGCACTCCTCTCT...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTACTCGGCAGCGCGGTTaGGGCTCCGATTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFTRQRG*GSDSGR
Trigger: GCGGCCAGAATCGGAGCCCCAACCGCGCTGCCGAGT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000404752.6
CDS-3UTR TCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCTGGTGGGTCAAGGGTaGAATGGGAATCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRLVGQG*NGNHCL
Trigger: AAGGCAGTGATTCCCATTTCACCCTTGACCCACCAG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTGGTCCAAAGGGCCTTaGTCCACTGCGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIWSKGP*STAMGQ
Trigger: CTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTACCTGACCTCTGTCCTTaGGGCACAGGTGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVPDLCP*GTGVRH
Trigger: GTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGG...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACCCTGACCTCTGTCCTTaGGGCACAGGTGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHPDLCP*GTGVRH
Trigger: GTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGG...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNPLPET*PLSLRH
Trigger: GTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGG...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCCCGGTGGCTTGTGAGTaGATAACCTGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSPVACE*ITWAGR
Trigger: CCTCCCTGCCCAGGTTATTCACTCACAAGCCACCGG...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACCGGTGGCTTGTGAGTaGATAACCTGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELPVACE*ITWAGR
Trigger: CCTCCCTGCCCAGGTTATTCACTCACAAGCCACCGG...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAAGGCCCGGTGGCTTGTaGGTGAATAACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVRPGGL*VNNLGR
Trigger: CCTGCCCAGGTTATTCACTCACAAGCCACCGGGCCT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGCGGCTGTGGCCCCGTaGCCTGGCTCCTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIAAVAP*PGSLPS
Trigger: GGAAGGCAAGGAGCCAGGCCACGGGGCCACAGCCGC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCATGAGTCCCTGCTTTaGGGATGCCAGGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRHESLL*GCQENL
Trigger: CAGGTTTTCCTGGCATCCCCAAAGCAGGGACTCATG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGTTAATCCCAGAACTTTaGGAGGCCGAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRLIPEL*EAEAGG
Trigger: TCCACCAGCCTCGGCCTCCCAAAGTTCTGGGATTAA...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAGATCATCATCAAAGGTaGCCCATTTGCCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRDHHQR*PICLDL
Trigger: CAAATCCAGGCAAATGGGTCACCTTTGATGATGATC...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACCATCCGGATTTTGGCTaGCTCCTGAAGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNHPDFG*LLKSVW
Trigger: CCACACACTCTTCAGGAGTCAGCCAAAATCCGGATG...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTATGGTCCAAAGGGCCTTaGTCCACTGCGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELWSKGP*STAMGQ
Trigger: CTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCA...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGATCAGGCACGGAAAACTaGACAGTAGCAAATGGATAC +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRSGTEN*TVANGY
Trigger: GTATCCATTTGCTACTGTTCAGTTTTCCGTGCCTGA...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKPLPET*PLSLRH
Trigger: GTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGG...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACAGGCGGAGGTTGCAGTaGGCCAAGATGACACACTGC +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHRRRLQ*AKMTHC
Trigger: GCAGTGTGTCATCTTGGCTCACTGCAACCTCCGCCT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACGTCAAGACTGAATCTTaGGATGTCCTGAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNVKTES*DVLKAR
Trigger: CCGGGCCTTCAGGACATCTCAAGATTCAGTCTTGAC...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCTGAAGTTCCACGTATaGTCCCTGGACAACCACTAC +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRLKFHV*SLDNHY
Trigger: GTAGTGGTTGTCCAGGGAGCATACGTGGAACTTCAG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGACTGGGTAACAAGGCATaGGATAAACATGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRLGNKA*DKHVGL
Trigger: CAGACCAACATGTTTATCCCATGCCTTGTTACCCAG...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCACCCCCAAAGTTTTTCTaGTGTCCGACGCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSPPKFF*CPTLRS
Trigger: AGAACGGAGCGTCGGACACCAGAAAAACTTTGGGGG...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649748.1
CDS-3UTR TCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCCTGGTGGGTCAAGGGTaGAATGGGAATCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVILVGQG*NGNHCL
Trigger: AAGGCAGTGATTCCCATTTCACCCTTGACCCACCAG...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGAGGCCCGGTGGCTTGTaGGTGAATAACCTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILRPGGL*VNNLGR
Trigger: CCTGCCCAGGTTATTCACTCACAAGCCACCGGGCCT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACCTGAAGTTCCACGTATaGTCCCTGGACAACCACTAC +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNLKFHV*SLDNHY
Trigger: GTAGTGGTTGTCCAGGGAGCATACGTGGAACTTCAG...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAAGAGAGGAGTGCTGCTaGTGGAGGAAGATCCACTGG +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVREECC*WRKIHW
Trigger: CCAGTGGATCTTCCTCCACCAGCAGCACTCCTCTCT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAAGAGAGGAGTGCTGCTaGTGGAGGAAGATCCACTGG +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELREECC*WRKIHW
Trigger: CCAGTGGATCTTCCTCCACCAGCAGCACTCCTCTCT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCCATGAGTCCCTGCTTTaGGGATGCCAGGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIHESLL*GCQENL
Trigger: CAGGTTTTCCTGGCATCCCCAAAGCAGGGACTCATG...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGGGGTCAAGGGTGAAATaGGAATCACTGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRGSRVK*ESLPSS
Trigger: AGATGAAGGCAGTGATTCCCATTTCACCCTTGACCC...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAACATGTTTCTGTGGCTaGACATCACTCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSTCFCG*TSLSTP
Trigger: GGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAGGAAGATTCTCCTCCTaGTATTGCGAGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELGRFSS*YCEWAV
Trigger: GACAGCCCACTCGCAATATCAGGAGGAGAATCTTCC...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCGGAAGATTCTCCTCCTaGTATTGCGAGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIGRFSS*YCEWAV
Trigger: GACAGCCCACTCGCAATATCAGGAGGAGAATCTTCC...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAATGTTGACAAAAGCCTaGAGTTCCACGTATGCTCCC +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSMLTKA*SSTYAP
Trigger: GGGAGCATACGTGGAACTTCAGGCTTTTGTCAACAT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCACCAATGAGGCCATGTTaGCAAAAGCCTGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSPMRPC*QKPEVP
Trigger: TGGAACTTCAGGCTTTTGTCAACATGGCCTCATTGG...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTGGTCCAAAGGGCCTTaGTCCACTGCGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFWSKGP*STAMGQ
Trigger: CTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGTGGTCCAAAGGGCCTTaGTCCACTGCGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILWSKGP*STAMGQ
Trigger: CTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCA...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTAGGCGGAGGTTGCAGTaGGCCAAGATGACACACTGC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFRRRLQ*AKMTHC
Trigger: GCAGTGTGTCATCTTGGCTCACTGCAACCTCCGCCT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGGGCTGGTGGATCACCTaGGGTCAGGAGTTCGAGACT +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILGWWIT*GQEFET
Trigger: AGTCTCGAACTCCTGACCTCAGGTGATCCACCAGCC...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACGTCAAGACTGAATCTTaGGATGTCCTGAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHVKTES*DVLKAR
Trigger: CCGGGCCTTCAGGACATCTCAAGATTCAGTCTTGAC...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGGAGGGGACTCCGGGCTaGAGGCACAGGCTAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMEGTPG*RHRLRS
Trigger: GGACCTTAGCCTGTGCCTGCAGCCCGGAGTCCCCTC...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS-3UTR GCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACAGGGCCTTGATCCACTaGGATGGGACAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHRALIH*DGTGKC
Trigger: ACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCAGGGCCTTGATCCACTaGGATGGGACAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSRALIH*DGTGKC
Trigger: ACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCT...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAAAATCATACTGGCTaGGGGGTCACACAACGAGTA +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRKNHTG*GVTQRV
Trigger: TACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTT...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAAACTCCTTGGAAGTCTaGTCATTTGACTCCAAAATG +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRNSLEV*SFDSKM
Trigger: CATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTT...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACGGGAGATCATCACTTTaGAATCCTAGGCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNGRSSL*NPRLSA
Trigger: GGCTGAAAGCCTAGGATTCCAAAGTGATGATCTCCC...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGTGGTTCTCAGCTGACTaGAGATGTTCAAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRWFSAD*RCSSFS
Trigger: TGAGAAGCTTGAACATCTCCAGTCAGCTGAGAACCA...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAAGTCATGGTACGATGTaGACCCCAACTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSSHGTM*TPTSAS
Trigger: AGATGCTGAAGTTGGGGTCCACATCGTACCATGACT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGACTTCACTGGGACTGTaGGCAGCATCAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKTSLGL*AASVSA
Trigger: GGCCGAAACTGATGCTGCCCACAGTCCCAGTGAAGT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACTCCTCTCGAAAATACTaGAACTGGGGGAGATCATCA +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNSSRKY*NWGRSS
Trigger: TGATGATCTCCCCCAGTTTCAGTATTTTCGAGAGGA...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATCCTCTCGAAAATACTaGAACTGGGGGAGATCATCA +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSSSRKY*NWGRSS
Trigger: TGATGATCTCCCCCAGTTTCAGTATTTTCGAGAGGA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACATTTTGGCTGACTCCTaGAGAGTGTGTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHILADS*RVCGGQ
Trigger: TTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAAT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGCATCCGGATTTTGGCTaGCTCCTGAAGAGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKHPDFG*LLKSVW
Trigger: CCACACACTCTTCAGGAGTCAGCCAAAATCCGGATG...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGACTCTCATATTTTGCTaGCCCCACAGTGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRTLIFC*PHSDLN
Trigger: ATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGT...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATCAGGCACGGAAAACTaGACAGTAGCAAATGGATAC +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSSGTEN*TVANGY
Trigger: GTATCCATTTGCTACTGTTCAGTTTTCCGTGCCTGA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACTCAGGCACGGAAAATTaGATTTTTGTCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNSGTEN*IFVWKP
Trigger: CGGCTTCCAGACAAAAATTCAATTTTCCGTGCCTGA...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR GCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACCTGAAGTTCCACGTATaGTCCCTGGACAACCACTAC +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHLKFHV*SLDNHY
Trigger: GTAGTGGTTGTCCAGGGAGCATACGTGGAACTTCAG...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAGGGCCTTGATCCACTaGGATGGGACAGGAAAGTGT +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKRALIH*DGTGKC
Trigger: ACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATGCTTTCAGAGACTTCTaGCTCTGGAGGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNAFRDF*LWRFMV
Trigger: GACCATGAACCTCCAGAGGCAGAAGTCTCTGAAAGC...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACGCTTTCAGAGACTTCTaGCTCTGGAGGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHAFRDF*LWRFMV
Trigger: GACCATGAACCTCCAGAGGCAGAAGTCTCTGAAAGC...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCTTTCAGAGACTTCTaGCTCTGGAGGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVAFRDF*LWRFMV
Trigger: GACCATGAACCTCCAGAGGCAGAAGTCTCTGAAAGC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGAGGAGAGTTACTTaGAGGTCCTGGACTGAAATA +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRKRRVT*RSWTEI
Trigger: TATTTCAGTCCAGGACCTCCAAGTAACTCTCCTCTT...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACCTGGAAGACCTACTTTaGGAGTTGGATGTGTACATG +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNLEDLL*ELDVYM
Trigger: CATGTACACATCCAACTCCCAAAGTAGGTCTTCCAG...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACTGGTTCTCAGCTGACTaGAGATGTTCAAGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNWFSAD*RCSSFS
Trigger: TGAGAAGCTTGAACATCTCCAGTCAGCTGAGAACCA...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATCCACGTATGCTCCCTaGACAACCACTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVSTYAP*TTTTDF
Trigger: GAAGTCTGTAGTGGTTGTCCAGGGAGCATACGTGGA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAAATCAAAAATCATACTaGCTGCGGGGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSNQKSY*LRGHTT
Trigger: CGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTACTTCACTGGGACTGTaGGCAGCATCAGTTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFTSLGL*AASVSA
Trigger: GGCCGAAACTGATGCTGCCCACAGTCCCAGTGAAGT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGTTGGGGCTCCGATTCTaGCCGCAGCCAGCCACACCA +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMLGLRF*PQPATP
Trigger: TGGTGTGGCTGGCTGCGGCCAGAATCGGAGCCCCAA...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404752.6
CDS-3UTR TCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCGTCTTGGTTCTCAGCTaGCTGGAGATGTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSVLVLS*LEMFKL
Trigger: AAGCTTGAACATCTCCAGTCAGCTGAGAACCAAGAC...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGTCTTGGTTCTCAGCTaGCTGGAGATGTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVVLVLS*LEMFKL
Trigger: AAGCTTGAACATCTCCAGTCAGCTGAGAACCAAGAC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCATTATACAAAGTCTTaGAACGCATCAGCTCAAACC +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRHYTKS*NASAQT
Trigger: GGTTTGAGCTGATGCGTTTCAAGACTTTGTATAATG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATATGTTGACAAAAGCCTaGAGTTCCACGTATGCTCCC +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNMLTKA*SSTYAP
Trigger: GGGAGCATACGTGGAACTTCAGGCTTTTGTCAACAT...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGACCCCACAGTGACTTaGATGACAGGTTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVDPTVT*MTGSDS
Trigger: TGAATCTGAACCTGTCATTCAAGTCACTGTGGGGTC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAACTCTCATATTTTGCTaGCCCCACAGTGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSTLIFC*PHSDLN
Trigger: ATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCPLPET*PLSLRH
Trigger: GTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGG...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAGGTTTATGTCTCCTTTaGTTCCCTTACCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSGLCLL*FPYPLV
Trigger: TACTAGAGGGTAAGGGAATCAAAGGAGACATAAACC...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACGGAAGTCTGCTCATTTaGCTCCAAAATGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNGSLLI*LQNGQT
Trigger: AGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCC...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGGCTTTCAGAGACTTCTaGCTCTGGAGGTTCATGGTC +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKAFRDF*LWRFMV
Trigger: GACCATGAACCTCCAGAGGCAGAAGTCTCTGAAAGC...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTATCTTCCATACCACTaGCTGGTAGGCACTCTCATA +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIYLPYH*LVGTLI
Trigger: TATGAGAGTGCCTACCAGGCAGTGGTATGGAAGATA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCAAAAATCATACTGGCTaGGGGGTCACACAACGAGTA +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIKNHTG*GVTQRV
Trigger: TACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTT...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATATCAGCTTCTGCATTaGCACAGACAATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSYQLLH*HRQSIW
Trigger: CCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAGATGCCAGGAAAACCTaGGAAGTCTTTGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELDARKT*EVFGRC
Trigger: ACACCTACCAAAGACTTCCCAGGTTTTCCTGGCATC...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCATGAGTCCCTGCTTTaGGGATGCCAGGAAAACCTG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFHESLL*GCQENL
Trigger: CAGGTTTTCCTGGCATCCCCAAAGCAGGGACTCATG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTACATGAGTGGTCACTaGGTAACAAGGCATGGGATA +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIYMSGH*VTRHGI
Trigger: TATCCCATGCCTTGTTACCCAGTGACCACTCATGTA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCCTGGAAGACCTACTTTaGGAGTTGGATGTGTACATG +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVILEDLL*ELDVYM
Trigger: CATGTACACATCCAACTCCCAAAGTAGGTCTTCCAG...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCGGGAGATCATCACTTTaGAATCCTAGGCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSGRSSL*NPRLSA
Trigger: GGCTGAAAGCCTAGGATTCCAAAGTGATGATCTCCC...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATGGGTCAAGGGTGAAATaGGAATCACTGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNGSRVK*ESLPSS
Trigger: AGATGAAGGCAGTGATTCCCATTTCACCCTTGACCC...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAAGACCATCCGGATTTTaGCTGACTCCTGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVRPSGF*LTPEEC
Trigger: ACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACCTTGATCCACTGCGATaGGACAGGAAAGTGTATCCT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHLDPLR*DRKVYP
Trigger: AGGATACACTTTCCTGTCCCATCGCAGTGGATCAAG...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCCTTGATCCACTGCGATaGGACAGGAAAGTGTATCCT +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNILDPLR*DRKVYP
Trigger: AGGATACACTTTCCTGTCCCATCGCAGTGGATCAAG...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGACTACATTTTAGCCTGTaGTTTCAACATCATTCTACA +
Preference number: 4 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRLHFSL*FQHHST
Trigger: TGTAGAATGATGTTGAAACCACAGGCTAAAATGTAG...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 72 bp ACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTaGAGTTTCAATAGGAAGCAAAACATCACACGAATT +
Preference number: 4 (lower is better)
Translates to: TGCGVTQRVTVP*SFNRKQNITRI
Trigger: AATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
3UTR CAA 72 bp TGTAACACCCTGCTGTTAATGCTATCAGCTTCTGCATaGCCACAGACAATCCATTTGGGCTTTAGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CNTLLLMLSASA*PQTIHLGFSPA
Trigger: AGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAGCATTAACAGCAGGGTGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGATCATCATCAAAGGTaGCCCATTTGCCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVDHHQR*PICLDL
Trigger: CAAATCCAGGCAAATGGGTCACCTTTGATGATGATC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCGGTCTACAGACACCTTaGTTCTCCAGAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIGLQTP*FSRGKF
Trigger: GAATTTTCCTCTGGAGAATCAAGGTGTCTGTAGACC...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCTCCTCTCGAAAATACTaGAACTGGGGGAGATCATCA +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSSSRKY*NWGRSS
Trigger: TGATGATCTCCCCCAGTTTCAGTATTTTCGAGAGGA...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTTTTCTATTTCAACCTGGATGTTGTAGCAAGCTCGCTGCTGAACATGTTTCTGGACCCCACAGTGACTTaGATGACAGGTTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: LFYFNLDVVASSLLNMFLDPTVT*MTGSDS
Trigger: TGAATCTGAACCTGTCATTCAAGTCACTGTGGGGTC...CAGAAACATGTTCAGCAGCGAGCTTGCTACAACATCCAGGTTGAAATAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATCAGGCACGGAAAACTaGACAGTAGCAAATGGATAC +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVSGTEN*TVANGY
Trigger: GTATCCATTTGCTACTGTTCAGTTTTCCGTGCCTGA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAAGAGATGGGAAGAAATaGAGACGGCACCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVRDGKK*RRHLSN
Trigger: ATTACTGAGGTGCCGTCTTCATTTCTTCCCATCTCT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACAGAGATGGGAAGAAATaGAGACGGCACCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHRDGKK*RRHLSN
Trigger: ATTACTGAGGTGCCGTCTTCATTTCTTCCCATCTCT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCGGTTTATGTCTCCTTTaGTTCCCTTACCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIGLCLL*FPYPLV
Trigger: TACTAGAGGGTAAGGGAATCAAAGGAGACATAAACC...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTTCTGTAGTCACATCTaGCCTTCTGCCAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKFCSHI*PSASSE
Trigger: CTCAGAACTGGCAGAAGGTCAGATGTGACTACAGAA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCAAAAATCATACTGGCTaGGGGGTCACACAACGAGTA +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIKNHTG*GVTQRV
Trigger: TACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTT...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAAAAAATCATACTGGCTaGGGGGTCACACAACGAGTA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVKNHTG*GVTQRV
Trigger: TACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACATACACACACAGATTTaGCCTACTCTACATCAACAG +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNIHTQI*PTLHQQ
Trigger: CTGTTGATGTAGAGTAGGGCAAATCTGTGTGTGTAT...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTATGTGGAGCACATCTTTaGGATCAGATTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELCGAHL*DQIVVL
Trigger: CAAGACCACAATCTGATCCCAAAGATGTGCTCCACA...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCCTGGGTAACAAGGCATaGGATAAACATGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSLGNKA*DKHVGL
Trigger: CAGACCAACATGTTTATCCCATGCCTTGTTACCCAG...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATACATGAGTGGTCACTaGGTAACAAGGCATGGGATA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVYMSGH*VTRHGI
Trigger: TATCCCATGCCTTGTTACCCAGTGACCACTCATGTA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGGGATGTGTACATGAGTaGTCACTGGGTAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKGCVHE*SLGNKA
Trigger: TGCCTTGTTACCCAGTGACCACTCATGTACACATCC...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGGGGAGATCATCACTTTaGAATCCTAGGCTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKGRSSL*NPRLSA
Trigger: GGCTGAAAGCCTAGGATTCCAAAGTGATGATCTCCC...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTCCACGTATGCTCCCTaGACAACCACTACAGACTTC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFSTYAP*TTTTDF
Trigger: GAAGTCTGTAGTGGTTGTCCAGGGAGCATACGTGGA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACTCAGAGGGAATTTCTTaGTCTGATCCAAGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNSEGIS*SDPSSN
Trigger: ATTAGAGCTTGGATCAGACCAAGAAATTCCCTCTGA...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTACATGTTTCTGTGGCTaGACATCACTCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFTCFCG*TSLSTP
Trigger: GGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAAATCAAAAATCATACTaGCTGCGGGGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELNQKSY*LRGHTT
Trigger: CGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGGGTCTACAGACACCTTaGTTCTCCAGAGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKGLQTP*FSRGKF
Trigger: GAATTTTCCTCTGGAGAATCAAGGTGTCTGTAGACC...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGGAAGATTCTCCTCCTaGTATTGCGAGTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIGRFSS*YCEWAV
Trigger: GACAGCCCACTCGCAATATCAGGAGGAGAATCTTCC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCTTTCCAAAATGGACTTaGAAAAGCACAGTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIFPKWT*KSTVLS
Trigger: CGAGAGGACTGTGCTTTTTCAAGTCCATTTTGGAAA...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTATTTTTCCTGCTACACTaGAGTTCTCAACCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELFFLLH*SSQPWV
Trigger: AACCCAAGGTTGAGAACTTCAGTGTAGCAGGAAAAA...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATCTATGTCAGGTTCATaGACTACTTCTGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSSMSGS*TTSVLE
Trigger: TTCTAAGACAGAAGTAGTTCATGAACCTGACATAGA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTATGTTGACAAAAGCCTaGAGTTCCACGTATGCTCCC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFMLTKA*SSTYAP
Trigger: GGGAGCATACGTGGAACTTCAGGCTTTTGTCAACAT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCCAATGAGGCCATGTTaGCAAAAGCCTGAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFPMRPC*QKPEVP
Trigger: TGGAACTTCAGGCTTTTGTCAACATGGCCTCATTGG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAACTCTCATATTTTGCTaGCCCCACAGTGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELTLIFC*PHSDLN
Trigger: ATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACACTCTCATATTTTGCTaGCCCCACAGTGACTTGAAT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHTLIFC*PHSDLN
Trigger: ATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTATCTTGCTACTCCTACTaGGTTATGCAGTCACCAATT +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELSCYSY*VMQSPI
Trigger: AATTGGTGACTGCATAACTCAGTAGGAGTAGCAAGA...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCTCTTGCTACTCCTACTaGGTTATGCAGTCACCAATT +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNISCYSY*VMQSPI
Trigger: AATTGGTGACTGCATAACTCAGTAGGAGTAGCAAGA...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCGGTGAATTACATATTTaGCAAGTGGGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIGELHI*QVGCHH
Trigger: ATGATGACAGCCCACTTGTCAAATATGTAATTCACC...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACTTGGTGTGGTTTCGGTaGATTACATATTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNLVWFR*ITYLTS
Trigger: ACTTGTCAAATATGTAATTCACCGAAACCACACCAA...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAGGTTTATGTCTCCTTTaGTTCCCTTACCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELGLCLL*FPYPLV
Trigger: TACTAGAGGGTAAGGGAATCAAAGGAGACATAAACC...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGTTCTGTAGTCACATCTaGCCTTCTGCCAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILFCSHI*PSASSE
Trigger: CTCAGAACTGGCAGAAGGTCAGATGTGACTACAGAA...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACGGAAGTCTGCTCATTTaGCTCCAAAATGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHGSLLI*LQNGQT
Trigger: AGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCC...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATAAAATTGGTCCCCATTaGCGGGAAGACATCATATTC +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNKIGPH*REDIIF
Trigger: GAATATGATGTCTTCCCGGCAATGGGGACCAATTTT...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTATCTTCCATACCACTaGCTGGTAGGCACTCTCATA +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKYLPYH*LVGTLI
Trigger: TATGAGAGTGCCTACCAGGCAGTGGTATGGAAGATA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCTATCAGCTTCTGCATTaGCACAGACAATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSYQLLH*HRQSIW
Trigger: CCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATA...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATAATGCTATCAGCTTCTaGATTGCCACAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNNAISF*IATDNP
Trigger: TGGATTGTCTGTGGCAATGCAGAAGCTGATAGCATT...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGTGGAGCACATCTTTaGGATCAGATTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKCGAHL*DQIVVL
Trigger: CAAGACCACAATCTGATCCCAAAGATGTGCTCCACA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCAAGAGGAGAGTTACTTaGAGGTCCTGGACTGAAATA +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIKRRVT*RSWTEI
Trigger: TATTTCAGTCCAGGACCTCCAAGTAACTCTCCTCTT...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTACATGAGTGGTCACTaGGTAACAAGGCATGGGATA +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKYMSGH*VTRHGI
Trigger: TATCCCATGCCTTGTTACCCAGTGACCACTCATGTA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGAGACCATCCGGATTTTaGCTGACTCCTGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILRPSGF*LTPEEC
Trigger: ACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAAACTTTCAGAAAAATTaGTCCCCATTGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVNFQKN*SPLPGR
Trigger: TCTTCCCGGCAATGGGGACCAATTTTTCTGAAAGTT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTAGTCATGGTACGATGTaGACCCCAACTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFSHGTM*TPTSAS
Trigger: AGATGCTGAAGTTGGGGTCCACATCGTACCATGACT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GGGTCTTCTCCATCGATTTTAATCCACTTCTTTTCTATTTCAACCTGGATGTTGACATGTTTCTGTGGCTaGACATCACTCTCCACTCCC +
Preference number: 4 (lower is better)
Translates to: GSSPSILIHFFSISTWMLTCFCG*TSLSTP
Trigger: GGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGT...CAACATCCAGGTTGAAATAGAAAAGAAGTGGATTAAAATCGATGGAGAAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAATCAAAAATCATACTaGCTGCGGGGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKNQKSY*LRGHTT
Trigger: CGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGTGCCACTTAGAAATCTaGGTAAAATACCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRCHLEI*VKYQVS
Trigger: AGATACTTGGTATTTTACCCAGATTTCTAAGTGGCA...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATTAATCCCAGAACTTTaGGAGGCCGAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIILIPEL*EAEAGG
Trigger: TCCACCAGCCTCGGCCTCCCAAAGTTCTGGGATTAA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATCACAGACAATCCATTTaGGCTTTAGTCCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNHRQSI*ALVQLL
Trigger: CAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTG...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACCACAGACAATCCATTTaGGCTTTAGTCCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHHRQSI*ALVQLL
Trigger: CAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTG...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCAACTGGTCAACTCCTTaGAAGTCTGCTCATTTGACT +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNINWSTP*KSAHLT
Trigger: AGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTT...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACAACTGGTCAACTCCTTaGAAGTCTGCTCATTTGACT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHNWSTP*KSAHLT
Trigger: AGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 72 bp GTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATTaGACTCCAAAATGGTCAAACTCACAATGGAGTGAT +
Preference number: 4 (lower is better)
Translates to: VTNWSTPWKSAH*TPKWSNSQWSD
Trigger: ATCACTCCATTGTGAGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 72 bp AAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTaGGAAGTCTGCTCATTTGACTCCAAAATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: KGDQTSHKLVNS*EVCSFDSKMVK
Trigger: TTTGACCATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATTGGAGGTCCTGGACTaGAATAAAAATCTACAATGG +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVLEVLD*NKNLQW
Trigger: CCATTGTAGATTTTTATTTCAGTCCAGGACCTCCAA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTTTCCAAAATGGACTTaGAAAAGCACAGTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKFPKWT*KSTVLS
Trigger: CGAGAGGACTGTGCTTTTTCAAGTCCATTTTGGAAA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCCTGGTGGGTCAAGGGTaGAATGGGAATCACTGCCTT +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCLVGQG*NGNHCL
Trigger: AAGGCAGTGATTCCCATTTCACCCTTGACCCACCAG...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCGACAGACAATGGGGATaGTCTAGACTTGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIDRQWG*SRLEFL
Trigger: CAAAAATTCAAGTCTAGATCATCCCCATTGTCTGTC...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAGACAGACAATGGGGATaGTCTAGACTTGAATTTTTG +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELDRQWG*SRLEFL
Trigger: CAAAAATTCAAGTCTAGATCATCCCCATTGTCTGTC...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTCTTGCTACTCCTACTaGGTTATGCAGTCACCAATT +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKSCYSY*VMQSPI
Trigger: AATTGGTGACTGCATAACTCAGTAGGAGTAGCAAGA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGAGAGATGGGAAGAAATaGAGACGGCACCTCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILRDGKK*RRHLSN
Trigger: ATTACTGAGGTGCCGTCTTCATTTCTTCCCATCTCT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACAGGAATCCTGCCAAGTaGAAGGAAATATGTCTTAGT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHRNPAK*KEICLS
Trigger: ACTAAGACATATTTCCTTTCACTTGGCAGGATTCCT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGGTCAAGACTGAATCTTaGGATGTCCTGAAGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMVKTES*DVLKAR
Trigger: CCGGGCCTTCAGGACATCTCAAGATTCAGTCTTGAC...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTATGAGAACATCTTTTTaGTTCCTGGTGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFMRTSF*FLVGQG
Trigger: CCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCAT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGATGAGAACATCTTTTTaGTTCCTGGTGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILMRTSF*FLVGQG
Trigger: CCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCAT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAAGTGTGGATTTTTCCTaGTACACTGAAGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELSVDFS*YTEVLN
Trigger: GTTGAGAACTTCAGTGTAGCAGGAAAAATCCACACT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACAGTGTGGATTTTTCCTaGTACACTGAAGTTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHSVDFS*YTEVLN
Trigger: GTTGAGAACTTCAGTGTAGCAGGAAAAATCCACACT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTATCTTCCATACCACTaGCTGGTAGGCACTCTCATA +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFYLPYH*LVGTLI
Trigger: TATGAGAGTGCCTACCAGGCAGTGGTATGGAAGATA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCATACACACACAGATTTaGCCTACTCTACATCAACAG +
Preference number: 4 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIIHTQI*PTLHQQ
Trigger: CTGTTGATGTAGAGTAGGGCAAATCTGTGTGTGTAT...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTTTGTGGGCAGGATaGCATAAAACACACTTAGAA +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHSLWAG*HKTHLE
Trigger: TTCTAAGTGTGTTTTATGGCATCCTGCCCACAAAGA...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTCTTTGTGGGCAGGATaGCATAAAACACACTTAGAA +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNSLWAG*HKTHLE
Trigger: TTCTAAGTGTGTTTTATGGCATCCTGCCCACAAAGA...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TTCAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATAACTCCTTGGAAGTCTaGTCATTTGACTCCAAAATG +
Preference number: 4 (lower is better)
Translates to: FRSHFHSTVAGLGVVSVNNSLEV*SFDSKM
Trigger: CATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTT...ATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCGTTACTTGGAGGTCCTaGACTGAAATAAAAATCTAC +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIVTWRS*TEIKIY
Trigger: GTAGATTTTTATTTCAGTCCAGGACCTCCAAGTAAC...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAAGAGGAGAGTTACTTaGAGGTCCTGGACTGAAATA +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKKRRVT*RSWTEI
Trigger: TATTTCAGTCCAGGACCTCCAAGTAACTCTCCTCTT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCTGGGTAACAAGGCATaGGATAAACATGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFLGNKA*DKHVGL
Trigger: CAGACCAACATGTTTATCCCATGCCTTGTTACCCAG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCTGGAAGACCTACTTTaGGAGTTGGATGTGTACATG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFLEDLL*ELDVYM
Trigger: CATGTACACATCCAACTCCCAAAGTAGGTCTTCCAG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCAGGATTAACTTCATCTaGAAGACCTACTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSRINFI*KTYFGS
Trigger: ACTCCCAAAGTAGGTCTTCCAGATGAAGTTAATCCT...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAACTTTCAGAAAAATTaGTCCCCATTGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKNFQKN*SPLPGR
Trigger: TCTTCCCGGCAATGGGGACCAATTTTTCTGAAAGTT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTCAACCTGGATGTTGTAGCAAGCTCGCTGCTGAACATGTTTCTGTGGCTGGTCACCAATTTTATCTaGGTCTTCTCCATCGATTTT +
Preference number: 4 (lower is better)
Translates to: YFNLDVVASSLLNMFLWLVTNFI*VFSIDF
Trigger: AAAATCGATGGAGAAGACCCAGATAAAATTGGTGAC...CAGCCACAGAAACATGTTCAGCAGCGAGCTTGCTACAACATCCAGGTTGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR CCA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACTGCCACTTAGAAATCTaGGTAAAATACCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNCHLEI*VKYQVS
Trigger: AGATACTTGGTATTTTACCCAGATTTCTAAGTGGCA...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTTAATCCCAGAACTTTaGGAGGCCGAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCLIPEL*EAEAGG
Trigger: TCCACCAGCCTCGGCCTCCCAAAGTTCTGGGATTAA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTGGTCAAACTCACAATaGAGTGATCTAAGCAAAATG +
Preference number: 4 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIWSNSQ*SDLSKM
Trigger: CATTTTGCTTAGATCACTCCATTGTGAGTTTGACCA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGATTTTGGCTGACTCCTaGAGAGTGTGTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMILADS*RVCGGQ
Trigger: TTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAAT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCATTTTGGCTGACTCCTaGAGAGTGTGTGGGGGACAA +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCILADS*RVCGGQ
Trigger: TTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAAT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATCTATGTCAGGTTCATaGACTACTTCTGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVSMSGS*TTSVLE
Trigger: TTCTAAGACAGAAGTAGTTCATGAACCTGACATAGA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTATCTATGTCAGGTTCATaGACTACTTCTGTCTTAGAA +
Preference number: 4 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELSMSGS*TTSVLE
Trigger: TTCTAAGACAGAAGTAGTTCATGAACCTGACATAGA...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGCATTATACAAAGTCTTaGAACGCATCAGCTCAAACC +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKHYTKS*NASAQT
Trigger: GGTTTGAGCTGATGCGTTTCAAGACTTTGTATAATG...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGGGTGAATTACATATTTaGCAAGTGGGCTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKGELHI*QVGCHH
Trigger: ATGATGACAGCCCACTTGTCAAATATGTAATTCACC...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTTGGTGTGGTTTCGGTaGATTACATATTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHLVWFR*ITYLTS
Trigger: ACTTGTCAAATATGTAATTCACCGAAACCACACCAA...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGGGAAGTCTGCTCATTTaGCTCCAAAATGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILGSLLI*LQNGQT
Trigger: AGTTTGACCATTTTGGAGTCAAATGAGCAGACTTCC...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGCCAACCATCACCTATTaGATTCTTTGCCTTTACAGT +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKPTITY*ILCLYS
Trigger: ACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGG...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGAATGCTATCAGCTTCTaGATTGCCACAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILNAISF*IATDNP
Trigger: TGGATTGTCTGTGGCAATGCAGAAGCTGATAGCATT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTAATAAAAATCTACAATaGGGGAGGAGAGAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFNKNLQ*GRREEC
Trigger: GCACTCCTCTCTCCTCCCCCATTGTAGATTTTTATT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCGTTACTTGGAGGTCCTaGACTGAAATAAAAATCTAC +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSVTWRS*TEIKIY
Trigger: GTAGATTTTTATTTCAGTCCAGGACCTCCAAGTAAC...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGATGCCAGGAAAACCTaGGAAGTCTTTGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIDARKT*EVFGRC
Trigger: ACACCTACCAAAGACTTCCCAGGTTTTCCTGGCATC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGGATGTGTACATGAGTaGTCACTGGGTAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIGCVHE*SLGNKA
Trigger: TGCCTTGTTACCCAGTGACCACTCATGTACACATCC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAGGATTAACTTCATCTaGAAGACCTACTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKRINFI*KTYFGS
Trigger: ACTCCCAAAGTAGGTCTTCCAGATGAAGTTAATCCT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGGGTCAAGGGTGAAATaGGAATCACTGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIGSRVK*ESLPSS
Trigger: AGATGAAGGCAGTGATTCCCATTTCACCCTTGACCC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATACTTGATCCACTGCGATaGGACAGGAAAGTGTATCCT +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIILDPLR*DRKVYP
Trigger: AGGATACACTTTCCTGTCCCATCGCAGTGGATCAAG...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCGTCACCAATTTTATCTaGGTCTTCTCCATCGATTTT +
Preference number: 4 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSVTNFI*VFSIDF
Trigger: AAAATCGATGGAGAAGACCCAGATAAAATTGGTGAC...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGTCACCAATTTTATCTaGGTCTTCTCCATCGATTTT +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVVTNFI*VFSIDF
Trigger: AAAATCGATGGAGAAGACCCAGATAAAATTGGTGAC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCACAGACAATCCATTTaGGCTTTAGTCCAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFHRQSI*ALVQLL
Trigger: CAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGTTGGAGGTCCTGGACTaGAATAAAAATCTACAATGG +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILLEVLD*NKNLQW
Trigger: CCATTGTAGATTTTTATTTCAGTCCAGGACCTCCAA...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCGTCTTGGTTCTCAGCTaGCTGGAGATGTTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCVLVLS*LEMFKL
Trigger: AAGCTTGAACATCTCCAGTCAGCTGAGAACCAAGAC...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCGACCCCACAGTGACTTaGATGACAGGTTCAGATTCA +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCDPTVT*MTGSDS
Trigger: TGAATCTGAACCTGTCATTCAAGTCACTGTGGGGTC...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAATCCTAATCAGACTGTaGGTTCTTTGTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIILIRL*VLCGQD
Trigger: ATCCTGCCCACAAAGAACTCACAGTCTGATTAGGAT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAATGAGAACATCTTTTTaGTTCCTGGTGGGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIMRTSF*FLVGQG
Trigger: CCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCAT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTCCAACCATCACCTATTaGATTCTTTGCCTTTACAGT +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFPTITY*ILCLYS
Trigger: ACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGG...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTATACACACACAGATTTaGCCTACTCTACATCAACAG +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFIHTQI*PTLHQQ
Trigger: CTGTTGATGTAGAGTAGGGCAAATCTGTGTGTGTAT...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTTTGGGATCAGATTGTaGTCTTGTCAAGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHFGIRL*SCQEIK
Trigger: TTTGATTTCTTGACAAGACCACAATCTGATCCCAAA...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATTTGGGATCAGATTGTaGTCTTGTCAAGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVFGIRL*SCQEIK
Trigger: TTTGATTTCTTGACAAGACCACAATCTGATCCCAAA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGGATGCCAGGAAAACCTaGGAAGTCTTTGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMDARKT*EVFGRC
Trigger: ACACCTACCAAAGACTTCCCAGGTTTTCCTGGCATC...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCAGACCATCCGGATTTTaGCTGACTCCTGAAGAGTGT +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCRPSGF*LTPEEC
Trigger: ACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGAGTCATGGTACGATGTaGACCCCAACTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMSHGTM*TPTSAS
Trigger: AGATGCTGAAGTTGGGGTCCACATCGTACCATGACT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGTCAGAGGGAATTTCTTaGTCTGATCCAAGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILSEGIS*SDPSSN
Trigger: ATTAGAGCTTGGATCAGACCAAGAAATTCCCTCTGA...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACCTACATTTTAGCCTGTaGTTTCAACATCATTCTACA +
Preference number: 4 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHLHFSL*FQHHST
Trigger: TGTAGAATGATGTTGAAACCACAGGCTAAAATGTAG...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTACTACATTTTAGCCTGTaGTTTCAACATCATTCTACA +
Preference number: 4 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVLHFSL*FQHHST
Trigger: TGTAGAATGATGTTGAAACCACAGGCTAAAATGTAG...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGTCAAACTCACAATaGAGTGATCTAAGCAAAATG +
Preference number: 4 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKWSNSQ*SDLSKM
Trigger: CATTTTGCTTAGATCACTCCATTGTGAGTTTGACCA...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
3UTR CAA 72 bp ATGCTATCAGCTTCTGCATTGCCACAGACAATCCATTaGGGCTTTAGTCCAGCTTTTGCTATTATATTGTCA +
Preference number: 4 (lower is better)
Translates to: MLSASALPQTIH*GFSPAFAIILS
Trigger: TGACAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCGATCATCATCAAAGGTaGCCCATTTGCCTGGATTTG +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCDHHQR*PICLDL
Trigger: CAAATCCAGGCAAATGGGTCACCTTTGATGATGATC...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATTTTTCCTGCTACACTaGAGTTCTCAACCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIFFLLH*SSQPWV
Trigger: AACCCAAGGTTGAGAACTTCAGTGTAGCAGGAAAAA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTTGGTGTGGTTTCGGTaGATTACATATTTGACAAGT +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFLVWFR*ITYLTS
Trigger: ACTTGTCAAATATGTAATTCACCGAAACCACACCAA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGGTTTATGTCTCCTTTaGTTCCCTTACCCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIGLCLL*FPYPLV
Trigger: TACTAGAGGGTAAGGGAATCAAAGGAGACATAAACC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGATCCTAATCAGACTGTaGGTTCTTTGTGGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMILIRL*VLCGQD
Trigger: ATCCTGCCCACAAAGAACTCACAGTCTGATTAGGAT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGTATCTTCCATACCACTaGCTGGTAGGCACTCTCATA +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMYLPYH*LVGTLI
Trigger: TATGAGAGTGCCTACCAGGCAGTGGTATGGAAGATA...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATATCAGCTTCTGCATTaGCACAGACAATCCATTTGG +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIYQLLH*HRQSIW
Trigger: CCAAATGGATTGTCTGTGGCAATGCAGAAGCTGATA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAAATGCTATCAGCTTCTaGATTGCCACAGACAATCCA +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIINAISF*IATDNP
Trigger: TGGATTGTCTGTGGCAATGCAGAAGCTGATAGCATT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGTGTGGAGCACATCTTTaGGATCAGATTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMCGAHL*DQIVVL
Trigger: CAAGACCACAATCTGATCCCAAAGATGTGCTCCACA...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTGTTACTTGGAGGTCCTaGACTGAAATAAAAATCTAC +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFVTWRS*TEIKIY
Trigger: GTAGATTTTTATTTCAGTCCAGGACCTCCAAGTAAC...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGAATCAAAAATCATACTaGCTGCGGGGTCACACAACG +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMNQKSY*LRGHTT
Trigger: CGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGTTTTTCCTGCTACACTaGAGTTCTCAACCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMFFLLH*SSQPWV
Trigger: AACCCAAGGTTGAGAACTTCAGTGTAGCAGGAAAAA...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAAACTCCTTGGAAGTCTaGTCATTTGACTCCAAAATG +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIINSLEV*SFDSKM
Trigger: CATTTTGGAGTCAAATGAGCAGACTTCCAAGGAGTT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCAATAAAAATCTACAATaGGGGAGGAGAGAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCNKNLQ*GRREEC
Trigger: GCACTCCTCTCTCCTCCCCCATTGTAGATTTTTATT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAAGGATTAACTTCATCTaGAAGACCTACTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIRINFI*KTYFGS
Trigger: ACTCCCAAAGTAGGTCTTCCAGATGAAGTTAATCCT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCAACTTTCAGAAAAATTaGTCCCCATTGCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCNFQKN*SPLPGR
Trigger: TCTTCCCGGCAATGGGGACCAATTTTTCTGAAAGTT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTTGCCACTTAGAAATCTaGGTAAAATACCAAGTATCT +
Preference number: 4 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFCHLEI*VKYQVS
Trigger: AGATACTTGGTATTTTACCCAGATTTCTAAGTGGCA...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCAACTGGTCAACTCCTTaGAAGTCTGCTCATTTGACT +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCNWSTP*KSAHLT
Trigger: AGTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTTGGAGGTCCTGGACTaGAATAAAAATCTACAATGG +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCLEVLD*NKNLQW
Trigger: CCATTGTAGATTTTTATTTCAGTCCAGGACCTCCAA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR TCA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGCATTATACAAAGTCTTaGAACGCATCAGCTCAAACC +
Preference number: 4 (lower is better)
Translates to: SFQPTITYCILCLYSKIMHYTKS*NASAQT
Trigger: GGTTTGAGCTGATGCGTTTCAAGACTTTGTATAATG...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR GCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTCTTTGTGGGCAGGATaGCATAAAACACACTTAGAA +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCSLWAG*HKTHLE
Trigger: TTCTAAGTGTGTTTTATGGCATCCTGCCCACAAAGA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATGGTCAAACTCACAATaGAGTGATCTAAGCAAAATG +
Preference number: 4 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIWSNSQ*SDLSKM
Trigger: CATTTTGCTTAGATCACTCCATTGTGAGTTTGACCA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCGTCACCAATTTTATCTaGGTCTTCTCCATCGATTTT +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCVTNFI*VFSIDF
Trigger: AAAATCGATGGAGAAGACCCAGATAAAATTGGTGAC...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CCA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCCTACATTTTAGCCTGTaGTTTCAACATCATTCTACA +
Preference number: 4 (lower is better)
Translates to: YLRILIDVRINNYAVTPCLHFSL*FQHHST
Trigger: TGTAGAATGATGTTGAAACCACAGGCTAAAATGTAG...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS GCA 90 bp CGTGGCCTGGCTCCTTGCCTTCCAGGGCAGGAGGGGACTCCGGGCTaGAGGCACAGGCTAAGGTCCGAGCGGCAGCGCGGTTGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RGLAPCLPGQEGTPG*RHRLRSERQRGWGS
Trigger: GGAGCCCCAACCGCGCTGCCGCTCGGACCTTAGCCTGTGCCTGCAGCCCGGAGTCCCCTCCTGCCCTGGAAGGCAAGGAGCCAGGCCACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS CCA 90 bp TCCCGTCTCTGTCCCCTGGGGCTGGTCACTCACCGGCAGCGCGGTTaGGGCTCCGATTCTGGCCGCAGCCAGCCACACCAGGAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: SRLCPLGLVTHRQRG*GSDSGRSQPHQEAE
Trigger: CTCCGCCTCCTGGTGTGGCTGGCTGCGGCCAGAATCGGAGCCCCAACCGCGCTGCCGGTGAGTGACCAGCCCCAGGGGACAGAGACGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS GCA 90 bp CGTGGCCTGGCTCCTTGCCTTCCAGGGCAGGAGGGGACTCCGGGCTaGAGGCACAGGCTAAGGTCCGAGCTGAGGTACCAGGGAGCGGGG +
Preference number: 5 (lower is better)
Translates to: RGLAPCLPGQEGTPG*RHRLRSELRYQGAG
Trigger: CCCCGCTCCCTGGTACCTCAGCTCGGACCTTAGCCTGTGCCTGCAGCCCGGAGTCCCCTCCTGCCCTGGAAGGCAAGGAGCCAGGCCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 90 bp CCCAGTGAATGGTCATACCTGCAGGAAATATTTGGGCCAGTGTGGTaGCCCCCGCGGCTGTGGCCCCGTGGCCTGGCTCCTTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: PSEWSYLQEIFGPVW*PPRLWPRGLAPCLP
Trigger: TGGAAGGCAAGGAGCCAGGCCACGGGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGGTATGACCATTCACTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 90 bp GGTAAACGCGTCCAGATGCCTCCTCTTTGCTGCCTCAAGAGTGCATaGAGAGGGAGAAGGGGCGTTGTCCTCCCAGGAGAGGCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: GKRVQMPPLCCLKSA*RGRRGVVLPGEAAG
Trigger: CCCTGCAGCCTCTCCTGGGAGGACAACGCCCCTTCTCCCTCTCCATGCACTCTTGAGGCAGCAAAGAGGAGGCATCTGGACGCGTTTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 90 bp ATACCCAGTGAATGGTCATACCTGCAGGAAATATTTGGGCCAGTGTaGTGGCCCCCGCGGCTGTGGCCCCGTGGCCTGGCTCCTTGCCTT +
Preference number: 5 (lower is better)
Translates to: IPSEWSYLQEIFGPV*WPPRLWPRGLAPCL
Trigger: AAGGCAAGGAGCCAGGCCACGGGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGGTATGACCATTCACTGGGTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 90 bp AAATCAAATAGGTTGACTCTGCAGGAAATATTTGGGCCAGTGTGGTaGCCCCCGCGGCTGTGGCCCCGTGGCCTGGCTCCTTGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: KSNRLTLQEIFGPVW*PPRLWPRGLAPCLP
Trigger: TGGAAGGCAAGGAGCCAGGCCACGGGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGAGTCAACCTATTTGATTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS GCA 90 bp GGGGTGGGGGAGTTGGGAGGGAGACTAGAGCTATGCAGACGGGAATaGCAGGCTGGGAATACCAACAAACAGTGTGCTGCATGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: GVGELGGRLELCRRE*QAGNTNKQCAACQA
Trigger: TGCCTGACATGCAGCACACTGTTTGTTGGTATTCCCAGCCTGGCATTCCCGTCTGCATAGCTCTAGTCTCCCTCCCAACTCCCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 90 bp ATAGCAGGAGGAAGGACACAAGATAGTTTAGTGAGGGCCAAGCTGTaGGGGTGGGGAGGAGGTAAACGCGTCCAGATGCCTCCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: IAGGRTQDSLVRAKL*GWGGGKRVQMPPLC
Trigger: GCAAAGAGGAGGCATCTGGACGCGTTTACCTCCTCCCCACCCCCACAGCTTGGCCCTCACTAAACTATCTTGTGTCCTTCCTCCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS-3UTR CAA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCGACTCGGCAGCGCGGTaGGGGCTCCGATTCTGGCCG +
Preference number: 5 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIDSAAR*GLRFWP
Trigger: CGGCCAGAATCGGAGCCCCAACCGCGCTGCCGAGTC...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000404752.6
CDS TCA 90 bp TGGCTGGACATCACTCTCCACTCCCAGAGACCTGACCTCTGTCCTTaGGGCACAGGTGTCAGGCACGGAAAACTGAACAGTAGCAAATGG +
Preference number: 5 (lower is better)
Translates to: WLDITLHSQRPDLCP*GTGVRHGKLNSSKW
Trigger: CCATTTGCTACTGTTCAGTTTTCCGTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp AGAGAGGAGTGCTGCTGGTGGAGGAAGATCCACTGGGAAATTCCCTaGGGCCAGGAAGGTTCAGCTTCAGTCCATTTGGTCTACAGACAC +
Preference number: 5 (lower is better)
Translates to: REECCWWRKIHWEIP*GQEGSASVHLVYRH
Trigger: GTGTCTGTAGACCAAATGGACTGAAGCTGAACCTTCCTGGCCTCAGGGAATTTCCCAGTGGATCTTCCTCCACCAGCAGCACTCCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp GAACATGTTTCTGTGGCTGGACATCACTCTCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCACAGGTGTCAGGCACGGAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: EHVSVAGHHSPLPET*PLSLRHRCQARKTE
Trigger: TTCAGTTTTCCGTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp GAACATGTTTCTGTGGCTGGACATCACTCTCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCACAGGTGTCAGGCACGGAAAATTGAA +
Preference number: 5 (lower is better)
Translates to: EHVSVAGHHSPLPET*PLSLRHRCQARKIE
Trigger: TTCAATTTTCCGTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCACAGAAACATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS TCA 90 bp ATCAGCCCAGGTCAAGCCCTGAAAAATCTCTCCAGACTCCAGACTTaGTCTGTCCAGACCCATCCGAGAATTAACAGGCTCCCCATCGTG +
Preference number: 5 (lower is better)
Translates to: ISPGQALKNLSRLQT*SVQTHPRINRLPIV
Trigger: CACGATGGGGAGCCTGTTAATTCTCGGATGGGTCTGGACAGATCAAGTCTGGAGTCTGGAGAGATTTTTCAGGGCTTGACCTGGGCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAATTCTCCTCCTGATATaGCGAGTGGGCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRILLLI*RVGCLK
Trigger: CTTCAGACAGCCCACTCGCAATATCAGGAGGAGAAT...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGATGGTCCAAAGGGCCTaGATCCACTGCGATGGGACA +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRMVQRA*IHCDGT
Trigger: TGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCAT...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGACTGAGGTCAGAAGAATaGAATAAGCCTCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRLRSEE*NKPPLP
Trigger: AGGGAGGGGAGGCTTATTCAATTCTTCTGACCTCAG...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp TGGCTGGACATCACTCTCCACTCCCAGAGACCTGACCTCTGTCCTTaGGGCACAGGTGTCAGGCACGGAAAATTGAATTTTTGTCTGGAA +
Preference number: 5 (lower is better)
Translates to: WLDITLHSQRPDLCP*GTGVRHGKLNFCLE
Trigger: TTCCAGACAAAAATTCAATTTTCCGTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATACCGTGGCCTGGCTCCTaGCCTTCCAGGGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIPWPGS*PSRAGG
Trigger: CCCTCCTGCCCTGGAAGGCAAGGAGCCAGGCCACGG...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAATGGTCCAAAGGGCCTaGATCCACTGCGATGGGACA +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSMVQRA*IHCDGT
Trigger: TGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCAT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp TTAAGGAACCAGCATAGGATGACCTCTGCGCCAATGAGGCCATGTTaGCAAAAGCCTGAAGTTCCACGTATGCTCCCTGGACAACCACTA +
Preference number: 5 (lower is better)
Translates to: LRNQHRMTSAPMRPC*QKPEVPRMLPGQPL
Trigger: TAGTGGTTGTCCAGGGAGCATACGTGGAACTTCAGGCTTTTGTCAACATGGCCTCATTGGCGCAGAGGTCATCCTATGCTGGTTCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS GCA 90 bp GACTTCTGCCTCTGGAGGTTCATGGTCCAAAGGGCCTTGATCCACTaGGATGGGACAGGAAAGTGTATCCTTATATTGTCACAGGACCTT +
Preference number: 5 (lower is better)
Translates to: DFCLWRFMVQRALIH*DGTGKCILILSQDL
Trigger: AAGGTCCTGTGACAATATAAGGATACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCATGAACCTCCAGAGGCAGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS CCA 90 bp GGAGTTGGGAGGGAGACTAGAGCTATGCAGACGGGAATGCCAGGCTaGGAATACCAACAAACAGTGTGCTGCATGTCAGGCAAATTAAAA +
Preference number: 5 (lower is better)
Translates to: GVGRETRAMQTGMPG*EYQQTVCCMSGKLK
Trigger: TTTTAATTTGCCTGACATGCAGCACACTGTTTGTTGGTATTCCCAGCCTGGCATTCCCGTCTGCATAGCTCTAGTCTCCCTCCCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS TCA 90 bp GACCTGACCTCTGTCCTTGAGGCACAGGTGTCAGGCACGGAAAACTaGACAGTAGCAAATGGATACCAATCAGAGGGAATTTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: DLTSVLEAQVSGTEN*TVANGYQSEGISWS
Trigger: AGACCAAGAAATTCCCTCTGATTGGTATCCATTTGCTACTGTTCAGTTTTCCGTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 90 bp AGGATAAAGCACATGAGTCCCTGCTTTGGGGATGCCAGGAAAACCTaGGAAGTCTTTGGTAGGTGTAGAAAGAGGAGAGTTACTTGGAGG +
Preference number: 5 (lower is better)
Translates to: RIKHMSPCFGDARKT*EVFGRCRKRRVTWR
Trigger: CCTCCAAGTAACTCTCCTCTTTCTACACCTACCAAAGACTTCCCAGGTTTTCCTGGCATCCCCAAAGCAGGGACTCATGTGCTTTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 90 bp TTCATCAGCTCCTCCTCCACAGTAGTCAGAAAGTCAAGGAAGTCATaGTACGATGTGGACCCCAACTTCAGCATCTGCTCTATGTCAGGT +
Preference number: 5 (lower is better)
Translates to: FISSSSTVVRKSRKS*YDVDPNFSICSMSG
Trigger: ACCTGACATAGAGCAGATGCTGAAGTTGGGGTCCACATCGTACCATGACTTCCTTGACTTTCTGACTACTGTGGAGGAGGAGCTGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGATGGTCTACAGACACCTaGATTCTCCAGAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRWSTDT*ILQRKI
Trigger: AATTTTCCTCTGGAGAATCAAGGTGTCTGTAGACCA...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAAAAAATTGGTCCCCATaGCCGGGAAGACATCATATT +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRKNWSP*PGRHHI
Trigger: AATATGATGTCTTCCCGGCAATGGGGACCAATTTTT...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAATGGTCCAAAGGGCCTaGATCCACTGCGATGGGACA +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVMVQRA*IHCDGT
Trigger: TGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCAT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCAGACTGTGAGTTCTTaGTGGGCAGGATGCCATAAA +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRQTVSS*WAGCHK
Trigger: TTTATGGCATCCTGCCCACAAAGAACTCACAGTCTG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCACTGAGGTCAGAAGAATaGAATAAGCCTCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSLRSEE*NKPPLP
Trigger: AGGGAGGGGAGGCTTATTCAATTCTTCTGACCTCAG...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGTCAGCTTCAGTCCATTaGGTCTACAGACACCTTGAT +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRSASVH*VYRHLD
Trigger: ATCAAGGTGTCTGTAGACCAAATGGACTGAAGCTGA...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCATTCTCCTCCTGATATaGCGAGTGGGCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIILLLI*RVGCLK
Trigger: CTTCAGACAGCCCACTCGCAATATCAGGAGGAGAAT...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAGACCTACTTTGGGAGTaGGATGTGTACATGAGTGGT +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSDLLWE*DVYMSG
Trigger: ACCACTCATGTACACATCCAACTCCCAAAGTAGGTC...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGTCTGGAAGACCTACTTaGGGAGTTGGATGTGTACAT +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRSGRPT*GVGCVH
Trigger: ATGTACACATCCAACTCCCAAAGTAGGTCTTCCAGA...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAGCAGAGGCAATAAATTaGAGTTATCACAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRAEAIN*SYHSTF
Trigger: GAAAGTGCTGTGATAACTCAAATTTATTGCCTCTGC...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCCACAGACAATCCATTaGGGCTTTAGTCCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRPQTIH*GFSPAF
Trigger: AAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS GCA 90 bp GTGTGGGGGACAAAGGAAGAGGCATTTTCTTCAGCACATAGACAGTaGATAGACAAACTTCTAAGTGAGTCTTGGTTCTCAGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: VWGTKEEAFSSAHRQ*IDKLLSESWFSADW
Trigger: CCAGTCAGCTGAGAACCAAGACTCACTTAGAAGTTTGTCTATGCACTGTCTATGTGCTGAAGAAAATGCCTCTTCCTTTGTCCCCCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 90 bp TTGGGAGTTGGATGTGTACATGAGTGGTCACTGGGTAACAAGGCATaGGATAAACATGTTGGTCTGGTAGGCAGTAAGGAAGATTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGVGCVHEWSLGNKA*DKHVGLVGSKEDSP
Trigger: AGGAGAATCTTCCTTACTGCCTACCAGACCAACATGTTTATCCCATGCCTTGTTACCCAGTGACCACTCATGTACACATCCAACTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 90 bp ATTCTTCTTCTCAGGAATTCTCAGCATGAAAGACCATCCGGATTTTaGCTGACTCCTGAAGAGTGTGTGGGGGACAAAGGAAGAGGCATT +
Preference number: 5 (lower is better)
Translates to: ILLLRNSQHERPSGF*LTPEECVGDKGRGI
Trigger: AATGCCTCTTCCTTTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCTTTCATGCTGAGAATTCCTGAGAAGAAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGAGATCAGATTGTGGTCTaGTCAAGAAATCAAATAGGT +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRDQIVV*SRNQIG
Trigger: ACCTATTTGATTTCTTGACAAGACCACAATCTGATC...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCATTGTGGAGCACATCTTaGGGATCAGATTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSLWSTS*GSDCGL
Trigger: AAGACCACAATCTGATCCCAAAGATGTGCTCCACAA...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACATTCTCCTCCTGATATaGCGAGTGGGCTGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHILLLI*RVGCLK
Trigger: CTTCAGACAGCCCACTCGCAATATCAGGAGGAGAAT...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCGATGAGAACATCTTTTaGCTTCCTGGTGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIDENIF*LPGGSR
Trigger: CCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATC...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAAAATTGGTCCCCATaGCCGGGAAGACATCATATT +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRKNWSP*PGRHHI
Trigger: AATATGATGTCTTCCCGGCAATGGGGACCAATTTTT...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCACTGAAGTTCTCAACCTaGGGTTCAGAAAGCCTACAA +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSLKFST*GSESLQ
Trigger: TTGTAGGCTTTCTGAACCCAAGGTTGAGAACTTCAG...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTCCACATTCGTTCTGAGCAGACTGAAGTCACTGTAGAGTGCGCCCACACCAGATTCCAAGGAAATTTCTaGCTCCTCGTAGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LHIRSEQTEVTVECAHTRFQGNF*LLVVLF
Trigger: AAAAAGAACTACGAGGAGCAAGAAATTTCCTTGGAA...TCTGGTGTGGGCGCACTCTACAGTGACTTCAGTCTGCTCAGAACGAATGTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGGATCCAAGCTCTAATTaGTATGACAGACAATGGGGA +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRDPSSN*YDRQWG
Trigger: TCCCCATTGTCTGTCATACAAATTAGAGCTTGGATC...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp ATCTATCTTCCATACCACTGCCTGGTAGGCACTCTCATATTTTGCTaGCCCCACAGTGACTTGAATGACAGGTTCAGATTCAAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: IYLPYHCLVGTLIFC*PHSDLNDRFRFKFL
Trigger: CAGGAACTTGAATCTGAACCTGTCATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGTGCCTACCAGGCAGTGGTATGGAAGATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS CCA 90 bp ACTTCATCTGGAAGACCTACTTTGGGAGTTGGATGTGTACATGAGTaGTCACTGGGTAACAAGGCATGGGATAAACATGTTGGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: TSSGRPTLGVGCVHE*SLGNKAWDKHVGLV
Trigger: TACCAGACCAACATGTTTATCCCATGCCTTGTTACCCAGTGACCACTCATGTACACATCCAACTCCCAAAGTAGGTCTTCCAGATGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTTGTGGAGCACATCTTaGGGATCAGATTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVILWSTS*GSDCGL
Trigger: AAGACCACAATCTGATCCCAAAGATGTGCTCCACAA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCGACCTACTTTGGGAGTaGGATGTGTACATGAGTGGT +
Preference number: 5 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSDLLWE*DVYMSG
Trigger: ACCACTCATGTACACATCCAACTCCCAAAGTAGGTC...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCCATTATACAAAGTCTaGAAACGCATCAGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRPLYKV*KRISSN
Trigger: GTTTGAGCTGATGCGTTTCAAGACTTTGTATAATGG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAACAGAAATAGCTTCTTaGCAGCACGCGCCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELTEIAS*QHAPEN
Trigger: GTTTTCTGGCGCGTGCTGCAAAGAAGCTATTTCTGT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACACCAACCATCACCTATaGCATTCTTTGCCTTTACAG +
Preference number: 5 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNTNHHL*HSLPLQ
Trigger: CTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGT...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGCCACTGAGTAATCAAAAATCATACTGGCTGCGGGGTCACACAACGAGTAACCATACACACACAGATTaGCCCTACTCTACATCAACA +
Preference number: 5 (lower is better)
Translates to: QPLSNQKSYWLRGHTTSNHTHTD*PYSTST
Trigger: TGTTGATGTAGAGTAGGGCAAATCTGTGTGTGTATG...GTTACTCGTTGTGTGACCCCGCAGCCAGTATGATTTTTGATTACTCAGTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTACAGACTGTGAGTTCTTaGTGGGCAGGATGCCATAAA +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVQTVSS*WAGCHK
Trigger: TTTATGGCATCCTGCCCACAAAGAACTCACAGTCTG...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATACTGGCTGCGGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGCGGAAAATTGAATTTTaGTCTGGAAGCCGATCTATC +
Preference number: 5 (lower is better)
Translates to: HTGCGVTQRVTVPLSFNRRKIEF*SGSRSI
Trigger: GATAGATCGGCTTCCAGACAAAAATTCAATTTTCCG...CCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCCGCAGCCAGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAATCTTTGGGATCAGATaGTGGTCTTGTCAAGAAATC +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSIFGIR*WSCQEI
Trigger: GATTTCTTGACAAGACCACAATCTGATCCCAAAGAT...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCTTGTGGAGCACATCTTaGGGATCAGATTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNILWSTS*GSDCGL
Trigger: AAGACCACAATCTGATCCCAAAGATGTGCTCCACAA...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTATCTGGAAGACCTACTTaGGGAGTTGGATGTGTACAT +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELSGRPT*GVGCVH
Trigger: ATGTACACATCCAACTCCCAAAGTAGGTCTTCCAGA...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTACTGAAGTTCTCAACCTaGGGTTCAGAAAGCCTACAA +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVLKFST*GSESLQ
Trigger: TTGTAGGCTTTCTGAACCCAAGGTTGAGAACTTCAG...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACGGGGATGATCTAGACTaGAATTTTTGTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHGDDLD*NFCLEA
Trigger: GGCTTCCAGACAAAAATTCAAGTCTAGATCATCCCC...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTGGTTTATGTCTCCTTaGATTCCCTTACCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVIWFMSP*IPLPSS
Trigger: ACTAGAGGGTAAGGGAATCAAAGGAGACATAAACCA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATTTAATCCCAGAACTTaGGGAGGCCGAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIFNPRT*GGRGWW
Trigger: CCACCAGCCTCGGCCTCCCAAAGTTCTGGGATTAAA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACCACAGACAATCCATTaGGGCTTTAGTCCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELPQTIH*GFSPAF
Trigger: AAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGG...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCCCACAGACAATCCATTaGGGCTTTAGTCCAGCTTTT +
Preference number: 5 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIPQTIH*GFSPAF
Trigger: AAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGG...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCCTATCAGCTTCTGCATaGCCACAGACAATCCATTTG +
Preference number: 5 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNILSASA*PQTIHL
Trigger: CAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAG...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACTATCAGCTTCTGCATaGCCACAGACAATCCATTTG +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELLSASA*PQTIHL
Trigger: CAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAG...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCAAACTGGTCAACTCCTaGGAAGTCTGCTCATTTGAC +
Preference number: 5 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSKLVNS*EVCSFD
Trigger: GTCAAATGAGCAGACTTCCAAGGAGTTGACCAGTTT...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCGTCAGGCACGGAAAATaGAATTTTTGTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIVRHGK*NFCLEA
Trigger: GGCTTCCAGACAAAAATTCAATTTTCCGTGCCTGAC...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000444932.1
CDS-3UTR CAA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGGATGAGAACATCTTTTaGCTTCCTGGTGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILDENIF*LPGGSR
Trigger: CCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATC...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGTGGGCTGTCATCTCAATAGGCATCTCCTaGTTTCTTGATGAGAACATC +
Preference number: 5 (lower is better)
Translates to: AGLGVVSVNYIFDKWAVISIGIS*FLDENI
Trigger: GATGTTCTCATCAAGAAACAAGGAGATGCCTATTGA...GATGACAGCCCACTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACCTCGTAGTTCTTTTTaGGTTTTGAAACAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELPRSSF*VLKQLA
Trigger: TGCCAGCTGTTTCAAAACCAAAAAAGAACTACGAGG...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACCCTCGTAGTTCTTTTTaGGTTTTGAAACAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHPRSSF*VLKQLA
Trigger: TGCCAGCTGTTTCAAAACCAAAAAAGAACTACGAGG...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGATGGTCCAAAGGGCCTaGATCCACTGCGATGGGACA +
Preference number: 5 (lower is better)
Translates to: SFQPTITYCILCLYSKIMMVQRA*IHCDGT
Trigger: TGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCAT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATGGTTTATGTCTCCTTaGATTCCCTTACCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVWFMSP*IPLPSS
Trigger: ACTAGAGGGTAAGGGAATCAAAGGAGACATAAACCA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCTGGTTTATGTCTCCTTaGATTCCCTTACCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSWFMSP*IPLPSS
Trigger: ACTAGAGGGTAAGGGAATCAAAGGAGACATAAACCA...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAACCAACCATCACCTATaGCATTCTTTGCCTTTACAG +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELTNHHL*HSLPLQ
Trigger: CTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTTTAATCCCAGAACTTaGGGAGGCCGAGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCFNPRT*GGRGWW
Trigger: CCACCAGCCTCGGCCTCCCAAAGTTCTGGGATTAAA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGCAGACTGTGAGTTCTTaGTGGGCAGGATGCCATAAA +
Preference number: 5 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILQTVSS*WAGCHK
Trigger: TTTATGGCATCCTGCCCACAAAGAACTCACAGTCTG...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TGGAAAGGTGACCAGACTAGTCACAAACTGGTCAACTCCTTGGAAGTCTGCTCAGCTTTAGTCCAGCTTTaGCTATTATATTGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: WKGDQTSHKLVNSLEVCSALVQL*LLYCQD
Trigger: GTCTTGACAATATAATAGCAAAAGCTGGACTAAAGC...TGAGCAGACTTCCAAGGAGTTGACCAGTTTGTGACTAGTCTGGTCACCTTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTATGGAAGTCTGCTCATTaGACTCCAAAATGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVWKSAH*TPKWSN
Trigger: GTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCA...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAAAGAAATCAAATAGGTaGACTCCCGAATCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELKKSNR*TPESPK
Trigger: TTTGGGGGATTCGGGAGTCAACCTATTTGATTTCTT...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649748.1
CDS TCA 90 bp TCTTTGACTTTTGAGAAGATTGAACAGCAGGATCATCATCAAAGGTaGCCCATTTGCCTGGATTTGTGGAGCACATCTTTGGGATCAGAT +
Preference number: 5 (lower is better)
Translates to: SLTFEKIEQQDHHQR*PICLDLWSTSLGSD
Trigger: ATCTGATCCCAAAGATGTGCTCCACAAATCCAGGCAAATGGGTCACCTTTGATGATGATCCTGCTGTTCAATCTTCTCAAAAGTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAAAAATTGGTCCCCATaGCCGGGAAGACATCATATT +
Preference number: 5 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKKNWSP*PGRHHI
Trigger: AATATGATGTCTTCCCGGCAATGGGGACCAATTTTT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCACTTTACCCCAAAAGTaGTCCACAATTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSTLPQK*STISKE
Trigger: TTCCTTGGAAATTGTGGACAACTTTTGGGGTAAAGT...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAACTTTACCCCAAAAGTaGTCCACAATTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVTLPQK*STISKE
Trigger: TTCCTTGGAAATTGTGGACAACTTTTGGGGTAAAGT...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGGGGGATGATCTAGACTaGAATTTTTGTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILGDDLD*NFCLEA
Trigger: GGCTTCCAGACAAAAATTCAAGTCTAGATCATCCCC...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GGGGTCACACAACGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCTACTCAGATTCCATTTaGAAAGGAATCCTGCCAAGT +
Preference number: 5 (lower is better)
Translates to: GVTQRVTVPLSFNRKQNIYSDSI*KGILPS
Trigger: ACTTGGCAGGATTCCTTTCAAAATGGAATCTGAGTA...GATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCGTTGTGTGACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTACTCAGATTCCATTTaGAAAGGAATCCTGCCAAGT +
Preference number: 5 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHYSDSI*KGILPS
Trigger: ACTTGGCAGGATTCCTTTCAAAATGGAATCTGAGTA...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGCATACACACACAGATTaGCCCTACTCTACATCAACA +
Preference number: 5 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKHTHTD*PYSTST
Trigger: TGTTGATGTAGAGTAGGGCAAATCTGTGTGTGTATG...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 90 bp TGTTTCTTGATGAGAACATCTTTTTGCTTCCTGGTGGGTCAAGGGTaGAATGGGAATCACTGCCTTCATCTTTCCAAAATGGACTTGAAA +
Preference number: 5 (lower is better)
Translates to: CFLMRTSFCFLVGQG*NGNHCLHLSKMDLK
Trigger: TTTCAAGTCCATTTTGGAAAGATGAAGGCAGTGATTCCCATTTCACCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATCAAGAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CTAAACACAGCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACGATCAGATTGTGGTCTaGTCAAGAAATCAAATAGGT +
Preference number: 5 (lower is better)
Translates to: LNTAIRPVLKPLFRSHFHDQIVV*SRNQIG
Trigger: ACCTATTTGATTTCTTGACAAGACCACAATCTGATC...GTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGCTGTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CAGAAGTCATTTCCACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTAGATCAGATTGTGGTCTaGTCAAGAAATCAAATAGGT +
Preference number: 5 (lower is better)
Translates to: QKSFPLYSSRTWCGFGELDQIVV*SRNQIG
Trigger: ACCTATTTGATTTCTTGACAAGACCACAATCTGATC...TAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTGGAAATGACTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGATGAGAACATCTTTTaGCTTCCTGGTGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIDENIF*LPGGSR
Trigger: CCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCTTCCAAGGAAATTTCTaGCTCCTCGTAGTTCTTTTT +
Preference number: 5 (lower is better)
Translates to: HQTCPKTAIQKSFPLYSSFQGNF*LLVVLF
Trigger: AAAAAGAACTACGAGGAGCAAGAAATTTCCTTGGAA...GCTACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTGATCCAAGCTCTAATTaGTATGACAGACAATGGGGA +
Preference number: 5 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFDPSSN*YDRQWG
Trigger: TCCCCATTGTCTGTCATACAAATTAGAGCTTGGATC...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGTGGTTTATGTCTCCTTaGATTCCCTTACCCTCTAGT +
Preference number: 5 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILWFMSP*IPLPSS
Trigger: ACTAGAGGGTAAGGGAATCAAAGGAGACATAAACCA...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAACAGAAATAGCTTCTTaGCAGCACGCGCCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIITEIAS*QHAPEN
Trigger: GTTTTCTGGCGCGTGCTGCAAAGAAGCTATTTCTGT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCCATCAGACCTGTCCTAAAACCGCTATTCAGAAGTCATTTCCACTCTACAGTAGCTTTAGTCCAGCTTTaGCTATTATATTGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: AIRPVLKPLFRSHFHSTVALVQL*LLYCQD
Trigger: GTCTTGACAATATAATAGCAAAAGCTGGACTAAAGC...TACTGTAGAGTGGAAATGACTTCTGAATAGCGGTTTTAGGACAGGTCTGATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCCTGAGGTCAGAAGAATaGAATAAGCCTCCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCLRSEE*NKPPLP
Trigger: AGGGAGGGGAGGCTTATTCAATTCTTCTGACCTCAG...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCAAGAAATCAAATAGGTaGACTCGGCAGCGCGGTTGG +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCKKSNR*TRQRGW
Trigger: CCAACCGCGCTGCCGAGTCAACCTATTTGATTTCTT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404752.6
CDS TCA 90 bp TCCATTTGGTCTACAGACACCTTGATTCTCCAGAGGAAAATTCTTTaGCTTTTGAGAAGATTGAACAGCAGGATCATCATCAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: SIWSTDTLILQRKIL*LLRRLNSRIIIKGD
Trigger: GTCACCTTTGATGATGATCCTGCTGTTCAATCTTCTCAAAAGTCAAAGAATTTTCCTCTGGAGAATCAAGGTGTCTGTAGACCAAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS GCA 90 bp TTCTGTGTAAGACACATGTTCAATCTTCACAGTGTGGATTTTTCCTaGTACACTGAAGTTCTCAACCTTGGGTTCAGAAAGCCTACAATA +
Preference number: 5 (lower is better)
Translates to: FCVRHMFNLHSVDFS*YTEVLNLGFRKPTI
Trigger: TATTGTAGGCTTTCTGAACCCAAGGTTGAGAACTTCAGTGTAGCAGGAAAAATCCACACTGTGAAGATTGAACATGTGTCTTACACAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATCAGCTTCAGTCCATTaGGTCTACAGACACCTTGAT +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIISASVH*VYRHLD
Trigger: ATCAAGGTGTCTGTAGACCAAATGGACTGAAGCTGA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATCTGGAAGACCTACTTaGGGAGTTGGATGTGTACAT +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIISGRPT*GVGCVH
Trigger: ATGTACACATCCAACTCCCAAAGTAGGTCTTCCAGA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp AGTCACTGTAGAGTGCGCCCACACCAGATGATAAAGAAAGATGGTAGAATTTTTGCAGAGGCAATAAATTaGAGTTATCACAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SHCRVRPHQMIKKDGRIFAEAIN*SYHSTF
Trigger: GAAAGTGCTGTGATAACTCAAATTTATTGCCTCTGC...AAAAATTCTACCATCTTTCTTTATCATCTGGTGTGGGCGCACTCTACAGTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGGCAGAGGCAATAAATTaGAGTTATCACAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILAEAIN*SYHSTF
Trigger: GAAAGTGCTGTGATAACTCAAATTTATTGCCTCTGC...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CACTCTACAGTAGCAGGACTTGGTGTGGTTTCGGTGAATTACATATTTGACAAGAAGTGTATCCTTATATaGTCACAGGACCTTAAGGAA +
Preference number: 5 (lower is better)
Translates to: HSTVAGLGVVSVNYIFDKKCILI*SQDLKE
Trigger: TTCCTTAAGGTCCTGTGACAATATAAGGATACACTT...CTTGTCAAATATGTAATTCACCGAAACCACACCAAGTCCTGCTACTGTAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGGGGATGATCTAGACTaGAATTTTTGTCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIGDDLD*NFCLEA
Trigger: GGCTTCCAGACAAAAATTCAAGTCTAGATCATCCCC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCACAGAAATAGCTTCTTaGCAGCACGCGCCAGAAAAC +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCTEIAS*QHAPEN
Trigger: GTTTTCTGGCGCGTGCTGCAAAGAAGCTATTTCTGT...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATACTATCAGCTTCTGCATaGCCACAGACAATCCATTTG +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIILSASA*PQTIHL
Trigger: CAAATGGATTGTCTGTGGCAATGCAGAAGCTGATAG...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGCTGAAGTTCTCAACCTaGGGTTCAGAAAGCCTACAA +
Preference number: 5 (lower is better)
Translates to: SFQPTITYCILCLYSKIMLKFST*GSESLQ
Trigger: TTGTAGGCTTTCTGAACCCAAGGTTGAGAACTTCAG...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp GCATTGCCACAGACAATCCATTTGGGCTTTAGTCCAGCTTTTGCTATTATATTGAAGTGTATCCTTATATaGTCACAGGACCTTAAGGAA +
Preference number: 5 (lower is better)
Translates to: ALPQTIHLGFSPAFAIILKCILI*SQDLKE
Trigger: TTCCTTAAGGTCCTGTGACAATATAAGGATACACTT...CAATATAATAGCAAAAGCTGGACTAAAGCCCAAATGGATTGTCTGTGGCAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTGGTCTACAGACACCTaGATTCTCCAGAGGAAAATT +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCWSTDT*ILQRKI
Trigger: AATTTTCCTCTGGAGAATCAAGGTGTCTGTAGACCA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATATCAATAGGCATCTCCTaGTTTCTTGATGAGAACATC +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIISIGIS*FLDENI
Trigger: GATGTTCTCATCAAGAAACAAGGAGATGCCTATTGA...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAACTTTACCCCAAAAGTaGTCCACAATTTCCAAGGAA +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIITLPQK*STISKE
Trigger: TTCCTTGGAAATTGTGGACAACTTTTGGGGTAAAGT...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGGATCCAAGCTCTAATTaGTATGACAGACAATGGGGA +
Preference number: 5 (lower is better)
Translates to: SFQPTITYCILCLYSKIMDPSSN*YDRQWG
Trigger: TCCCCATTGTCTGTCATACAAATTAGAGCTTGGATC...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGACCAACCATCACCTATaGCATTCTTTGCCTTTACAG +
Preference number: 5 (lower is better)
Translates to: SFQPTITYCILCLYSKIMTNHHL*HSLPLQ
Trigger: CTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTGGAAGTCTGCTCATTaGACTCCAAAATGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCWKSAH*TPKWSN
Trigger: GTTTGACCATTTTGGAGTCAAATGAGCAGACTTCCA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCCCATTATACAAAGTCTaGAAACGCATCAGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCPLYKV*KRISSN
Trigger: GTTTGAGCTGATGCGTTTCAAGACTTTGTATAATGG...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TATTTAAGGATCCTAATAGATGTGCGAATTAACAATTATGCTGTAACACCCTGCTACTCAGATTCCATTTaGAAAGGAATCCTGCCAAGT +
Preference number: 5 (lower is better)
Translates to: YLRILIDVRINNYAVTPCYSDSI*KGILPS
Trigger: ACTTGGCAGGATTCCTTTCAAAATGGAATCTGAGTA...GCAGGGTGTTACAGCATAATTGTTAATTCGCACATCTATTAGGATCCTTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp CGAGTAACAGTGCCTTTGAGTTTCAATAGGAAGCAAAACATCACACGAATTATAGCTTTAGTCCAGCTTTaGCTATTATATTGTCAAGAC +
Preference number: 5 (lower is better)
Translates to: RVTVPLSFNRKQNITRIIALVQL*LLYCQD
Trigger: GTCTTGACAATATAATAGCAAAAGCTGGACTAAAGC...TATAATTCGTGTGATGTTTTGCTTCCTATTGAAACTCAAAGGCACTGTTACTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS-3UTR CAA 90 bp TCCTTTCAACCAACCATCACCTATTGCATTCTTTGCCTTTACAGTAAAATAATGAAGTGTATCCTTATATaGTCACAGGACCTTAAGGAA +
Preference number: 5 (lower is better)
Translates to: SFQPTITYCILCLYSKIMKCILI*SQDLKE
Trigger: TTCCTTAAGGTCCTGTGACAATATAAGGATACACTT...CATTATTTTACTGTAAAGGCAAAGAATGCAATAGGTGATGGTTGGTTGAAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS GCA 72 bp GCTCCTTGCCTTCCAGGGCAGGAGGGGACTCCGGGCTaGAGGCACAGGCTAAGGTCCGAGCGGCAGCGCGGT +
Preference number: 6 (lower is better)
Translates to: APCLPGQEGTPG*RHRLRSERQRG
Trigger: ACCGCGCTGCCGCTCGGACCTTAGCCTGTGCCTGCAGCCCGGAGTCCCCTCCTGCCCTGGAAGGCAAGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406226.1
CDS CCA 72 bp TGTCCCCTGGGGCTGGTCACTCACCGGCAGCGCGGTTaGGGCTCCGATTCTGGCCGCAGCCAGCCACACCAG +
Preference number: 6 (lower is better)
Translates to: CPLGLVTHRQRG*GSDSGRSQPHQ
Trigger: CTGGTGTGGCTGGCTGCGGCCAGAATCGGAGCCCCAACCGCGCTGCCGGTGAGTGACCAGCCCCAGGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS GCA 72 bp GCTCCTTGCCTTCCAGGGCAGGAGGGGACTCCGGGCTaGAGGCACAGGCTAAGGTCCGAGCTGAGGTACCAG +
Preference number: 6 (lower is better)
Translates to: APCLPGQEGTPG*RHRLRSELRYQ
Trigger: CTGGTACCTCAGCTCGGACCTTAGCCTGTGCCTGCAGCCCGGAGTCCCCTCCTGCCCTGGAAGGCAAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 72 bp GAATGGTCATACCTGCAGGAAATATTTGGGCCAGTGTaGTGGCCCCCGCGGCTGTGGCCCCGTGGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: EWSYLQEIFGPV*WPPRLWPRGLA
Trigger: AGCCAGGCCACGGGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGGTATGACCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS GCA 72 bp GAGAGGGAGAAGGGGCGTTGTCCTCCCAGGAGAGGCTaGAGGGTGTCTCGTAGTCCCTATTCCATCGCCTGC +
Preference number: 6 (lower is better)
Translates to: EREKGRCPPRRG*RVSRSPYSIAC
Trigger: GCAGGCGATGGAATAGGGACTACGAGACACCCTGCAGCCTCTCCTGGGAGGACAACGCCCCTTCTCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS TCA 72 bp TCTGTGGCTGGACATCACTCTCCACTCCCAGAGACCTaGCCTCTGTCCTTGAGGCACAGGTGTCAGGCACGG +
Preference number: 6 (lower is better)
Translates to: SVAGHHSPLPET*PLSLRHRCQAR
Trigger: CCGTGCCTGACACCTGTGCCTCAAGGACAGAGGTCAGGTCTCTGGGAGTGGAGAGTGATGTCCAGCCACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS GCA 72 bp TGGGGAGGAGGTAAACGCGTCCAGATGCCTCCTCTTTaGTGCCTCAAGAGTGCATGGAGAGGGAGAAGGGGC +
Preference number: 6 (lower is better)
Translates to: WGGGKRVQMPPL*CLKSAWRGRRG
Trigger: GCCCCTTCTCCCTCTCCATGCACTCTTGAGGCAGCAAAGAGGAGGCATCTGGACGCGTTTACCTCCTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 72 bp GTCCAGATGCCTCCTCTTTGCTGCCTCAAGAGTGCATaGAGAGGGAGAAGGGGCGTTGTCCTCCCAGGAGAG +
Preference number: 6 (lower is better)
Translates to: VQMPPLCCLKSA*RGRRGVVLPGE
Trigger: CTCTCCTGGGAGGACAACGCCCCTTCTCCCTCTCCATGCACTCTTGAGGCAGCAAAGAGGAGGCATCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CAA 72 bp CAATACCCAGTGAATGGTCATACCTGCAGGAAATATTaGGGCCAGTGTGGTGGCCCCCGCGGCTGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: QYPVNGHTCRKY*GQCGGPRGCGP
Trigger: GGGGCCACAGCCGCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGGTATGACCATTCACTGGGTATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS TCA 72 bp CCAGCTCAGGCTGCTCCCGGCTGCTCTGGTTCTGAGTaGGTGTGCAGAGGTTTGCAATATCAGCCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: PAQAAPGCSGSE*VCRGLQYQPRS
Trigger: TGACCTGGGCTGATATTGCAAACCTCTGCACACTCACTCAGAACCAGAGCAGCCGGGAGCAGCCTGAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS GCA 72 bp GGAGGAGGTAAACGCGTCCAGATGCCTCCTCTTTGCTaGCTCAAGAGTGCATGGAGAGGGAGAAGGGGCGTT +
Preference number: 6 (lower is better)
Translates to: GGGKRVQMPPLC*LKSAWRGRRGV
Trigger: AACGCCCCTTCTCCCTCTCCATGCACTCTTGAGGCAGCAAAGAGGAGGCATCTGGACGCGTTTACCTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS GCA 72 bp GGGACCCAACCCCAATACCCAGTGAATGGTCATACCTaGAGGAAATATTTGGGCCAGTGTGGTGGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: GTQPQYPVNGHT*RKYLGQCGGPR
Trigger: GCGGGGGCCACCACACTGGCCCAAATATTTCCTGCAGGTATGACCATTCACTGGGTATTGGGGTTGGGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS TCA 72 bp TGCTGCTGGTGGAGGAAGATCCACTGGGAAATTCCCTaGGGCCAGGAAGGTTCAGCTTCAGTCCATTTGGTC +
Preference number: 6 (lower is better)
Translates to: CCWWRKIHWEIP*GQEGSASVHLV
Trigger: GACCAAATGGACTGAAGCTGAACCTTCCTGGCCTCAGGGAATTTCCCAGTGGATCTTCCTCCACCAGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp GTGGGTCCAAGGGACCCAACCCCAATACCCAGTGAATaGTCATACCTGCAGGAAATATTTGGGCCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: VGPRDPTPIPSE*SYLQEIFGPVW
Trigger: CCACACTGGCCCAAATATTTCCTGCAGGTATGACCATTCACTGGGTATTGGGGTTGGGTCCCTTGGACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 72 bp AGGGAGACTAGAGCTATGCAGACGGGAATGCCAGGCTaGGAATACCAACAAACAGTGTGCTGCATGTCAGGC +
Preference number: 6 (lower is better)
Translates to: RETRAMQTGMPG*EYQQTVCCMSG
Trigger: GCCTGACATGCAGCACACTGTTTGTTGGTATTCCCAGCCTGGCATTCCCGTCTGCATAGCTCTAGTCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS TCA 72 bp GACCTCTGCGCCAATGAGGCCATGTTGACAAAAGCCTaGAGTTCCACGTATGCTCCCTGGACAACCACTACA +
Preference number: 6 (lower is better)
Translates to: DLCANEAMLTKA*SSTYAPWTTTT
Trigger: TGTAGTGGTTGTCCAGGGAGCATACGTGGAACTTCAGGCTTTTGTCAACATGGCCTCATTGGCGCAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 72 bp CAGCATAGGATGACCTCTGCGCCAATGAGGCCATGTTaGCAAAAGCCTGAAGTTCCACGTATGCTCCCTGGA +
Preference number: 6 (lower is better)
Translates to: QHRMTSAPMRPC*QKPEVPRMLPG
Trigger: TCCAGGGAGCATACGTGGAACTTCAGGCTTTTGTCAACATGGCCTCATTGGCGCAGAGGTCATCCTATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CAA 72 bp GACTTCTGCCTCTGGAGGTTCATGGTCCAAAGGGCCTaGATCCACTGCGATGGGACAGGAAAGTGTATCCTT +
Preference number: 6 (lower is better)
Translates to: DFCLWRFMVQRA*IHCDGTGKCIL
Trigger: AAGGATACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCATGAACCTCCAGAGGCAGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS TCA 72 bp ACTTCTGCCTCTGGAGGTTCATGGTCCAAAGGGCCTTaGTCCACTGCGATGGGACAGGAAAGTGTATCCTTA +
Preference number: 6 (lower is better)
Translates to: TSASGGSWSKGP*STAMGQESVSL
Trigger: TAAGGATACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCATGAACCTCCAGAGGCAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS TCA 72 bp GTTTGTGGGTCCAAGGGACCCAACCCCAATACCCAGTaGATGGTCATACCTGCAGGAAATATTTGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: VCGSKGPNPNTQ*MVIPAGNIWAS
Trigger: ACTGGCCCAAATATTTCCTGCAGGTATGACCATTCACTGGGTATTGGGGTTGGGTCCCTTGGACCCACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS TCA 72 bp GGAATTCTCAGCATGAAAGACCATCCGGATTTTGGCTaGCTCCTGAAGAGTGTGTGGGGGACAAAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GILSMKDHPDFG*LLKSVWGTKEE
Trigger: CTCTTCCTTTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCTTTCATGCTGAGAATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 72 bp GTGCAGAGGTTTGCAATATCAGCCCAGGTCAAGCCCTaGAAAATCTCTCCAGACTCCAGACTTGATCTGTCC +
Preference number: 6 (lower is better)
Translates to: VQRFAISAQVKP*KISPDSRLDLS
Trigger: GGACAGATCAAGTCTGGAGTCTGGAGAGATTTTTCAGGGCTTGACCTGGGCTGATATTGCAAACCTCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 72 bp CACATGAGTCCCTGCTTTGGGGATGCCAGGAAAACCTaGGAAGTCTTTGGTAGGTGTAGAAAGAGGAGAGTT +
Preference number: 6 (lower is better)
Translates to: HMSPCFGDARKT*EVFGRCRKRRV
Trigger: AACTCTCCTCTTTCTACACCTACCAAAGACTTCCCAGGTTTTCCTGGCATCCCCAAAGCAGGGACTCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp CTCAGGAATTCTCAGCATGAAAGACCATCCGGATTTTaGCTGACTCCTGAAGAGTGTGTGGGGGACAAAGGA +
Preference number: 6 (lower is better)
Translates to: LRNSQHERPSGF*LTPEECVGDKG
Trigger: TCCTTTGTCCCCCACACACTCTTCAGGAGTCAGCCAAAATCCGGATGGTCTTTCATGCTGAGAATTCCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 72 bp CCATACCACTGCCTGGTAGGCACTCTCATATTTTGCTaGCCCCACAGTGACTTGAATGACAGGTTCAGATTC +
Preference number: 6 (lower is better)
Translates to: PYHCLVGTLIFC*PHSDLNDRFRF
Trigger: GAATCTGAACCTGTCATTCAAGTCACTGTGGGGTCAGCAAAATATGAGAGTGCCTACCAGGCAGTGGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS GCA 72 bp CTCTGGAGGTTCATGGTCCAAAGGGCCTTGATCCACTaGGATGGGACAGGAAAGTGTATCCTTATATTGTCA +
Preference number: 6 (lower is better)
Translates to: LWRFMVQRALIH*DGTGKCILILS
Trigger: TGACAATATAAGGATACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCATGAACCTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS CCA 72 bp GAGGTTCATGGTCCAAAGGGCCTTGATCCACTGCGATaGGACAGGAAAGTGTATCCTTATATTGTCACAGGA +
Preference number: 6 (lower is better)
Translates to: EVHGPKGLDPLR*DRKVYPYIVTG
Trigger: TCCTGTGACAATATAAGGATACACTTTCCTGTCCCATCGCAGTGGATCAAGGCCCTTTGGACCATGAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000444932.1
ENST00000649748.1
CDS TCA 72 bp TCTGTCCTTGAGGCACAGGTGTCAGGCACGGAAAACTaGACAGTAGCAAATGGATACCAATCAGAGGGAATT +
Preference number: 6 (lower is better)
Translates to: SVLEAQVSGTEN*TVANGYQSEGI
Trigger: AATTCCCTCTGATTGGTATCCATTTGCTACTGTTCAGTTTTCCGTGCCTGACACCTGTGCCTCAAGGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp CTACTTTGGGAGTTGGATGTGTACATGAGTGGTCACTaGGTAACAAGGCATGGGATAAACATGTTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: LLWELDVYMSGH*VTRHGINMLVW
Trigger: CCAGACCAACATGTTTATCCCATGCCTTGTTACCCAGTGACCACTCATGTACACATCCAACTCCCAAAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp GGAAGACCTACTTTGGGAGTTGGATGTGTACATGAGTaGTCACTGGGTAACAAGGCATGGGATAAACATGTT +
Preference number: 6 (lower is better)
Translates to: GRPTLGVGCVHE*SLGNKAWDKHV
Trigger: AACATGTTTATCCCATGCCTTGTTACCCAGTGACCACTCATGTACACATCCAACTCCCAAAGTAGGTCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CAA 90 bp TTTTGGTCAATAGGCATCTCCTTGTTTCTTGATGAGAACATCTTTTaGCTTCCTGGTGGGTCAAGGGTGAAATGGGAATCACTGCCTTCA +
Preference number: 6 (lower is better)
Translates to: FWSIGISLFLDENIF*LPGGSRVKWESLPS
Trigger: TGAAGGCAGTGATTCCCATTTCACCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATCAAGAAACAAGGAGATGCCTATTGACCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 72 bp TTTGAGAAGATTGAACAGCAGGATCATCATCAAAGGTaGCCCATTTGCCTGGATTTGTGGAGCACATCTTTG +
Preference number: 6 (lower is better)
Translates to: FEKIEQQDHHQR*PICLDLWSTSL
Trigger: CAAAGATGTGCTCCACAAATCCAGGCAAATGGGTCACCTTTGATGATGATCCTGCTGTTCAATCTTCTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS GCA 72 bp TTATTATGTGGTCCAGCTCGTTTGAGCCTCTCCCATTaGCTTGTTTTCACAGCTCCCTTTTATGAGAAAGAA +
Preference number: 6 (lower is better)
Translates to: LLCGPARLSLSH*LVFTAPFYEKE
Trigger: TTCTTTCTCATAAAAGGGAGCTGTGAAAACAAGGCAATGGGAGAGGCTCAAACGAGCTGGACCACATAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CCA 72 bp GGTGACCCATTTGCCTGGATTTGTGGAGCACATCTTTaGGATCAGATTGTGGTCTTGTCAAGAAATCAAATA +
Preference number: 6 (lower is better)
Translates to: GDPFAWICGAHL*DQIVVLSRNQI
Trigger: TATTTGATTTCTTGACAAGACCACAATCTGATCCCAAAGATGTGCTCCACAAATCCAGGCAAATGGGTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp CATAGACAGTGCATAGACAAACTTCTAAGTGAGTCTTaGTTCTCAGCTGACTGGAGATGTTCAAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: HRQCIDKLLSES*FSADWRCSSFS
Trigger: TGAGAAGCTTGAACATCTCCAGTCAGCTGAGAACCAAGACTCACTTAGAAGTTTGTCTATGCACTGTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp CTCAGGATTAAAATAAGTAGGGCTGTTTTTATTATGTaGTCCAGCTCGTTTGAGCCTCTCCCATTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: LRIKISRAVFIM*SSSFEPLPLPC
Trigger: ACAAGGCAATGGGAGAGGCTCAAACGAGCTGGACCACATAATAAAAACAGCCCTACTTATTTTAATCCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484110.1
CDS CAA 72 bp ATAGGCATCTCCTTGTTTCTTGATGAGAACATCTTTTaGCTTCCTGGTGGGTCAAGGGTGAAATGGGAATCA +
Preference number: 6 (lower is better)
Translates to: IGISLFLDENIF*LPGGSRVKWES
Trigger: TGATTCCCATTTCACCCTTGACCCACCAGGAAGCAAAAAGATGTTCTCATCAAGAAACAAGGAGATGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS TCA 72 bp GTTCAATCTTCACAGTGTGGATTTTTCCTGCTACACTaGAGTTCTCAACCTTGGGTTCAGAAAGCCTACAAT +
Preference number: 6 (lower is better)
Translates to: VQSSQCGFFLLH*SSQPWVQKAYN
Trigger: ATTGTAGGCTTTCTGAACCCAAGGTTGAGAACTTCAGTGTAGCAGGAAAAATCCACACTGTGAAGATTGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CCA 72 bp ACAGTAGCAAATGGATACCAATCAGAGGGAATTTCTTaGTCTGATCCAAGCTCTAATTTGTATGACAGACAA +
Preference number: 6 (lower is better)
Translates to: TVANGYQSEGIS*SDPSSNLYDRQ
Trigger: TTGTCTGTCATACAAATTAGAGCTTGGATCAGACCAAGAAATTCCCTCTGATTGGTATCCATTTGCTACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1
CDS CAA 72 bp GTCTACAGACACCTTGATTCTCCAGAGGAAAATTCTTaGACTTTTGAGAAGATTGAACAGCAGGATCATCAT +
Preference number: 6 (lower is better)
Translates to: VYRHLDSPEENS*TFEKIEQQDHH
Trigger: ATGATGATCCTGCTGTTCAATCTTCTCAAAAGTCAAAGAATTTTCCTCTGGAGAATCAAGGTGTCTGTAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000404752.6
ENST00000406226.1
ENST00000649748.1