RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STOML2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165283

Ensembl transcript IDs: ENST00000356493.10, ENST00000452248.6, ENST00000487490.1, ENST00000488050.1, ENST00000619795.4

Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAGTGTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTaGTCGGCCACAGTCAGTGAAGCTGCTGCATCTCCATTCTGTGAT +
Preference number: 1 (lower is better)
Translates to: IVLESLASLENALTY*SATVSEAAASPFCD
Trigger: ATCACAGAATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR TCA 90 bp TTGTTCCCAGACTCCCTGGCCAAGCCCAGCTCCACTAACTCATCTTaGCTCGATCAAGTTCCTCATCAAGACTTGCATCTGTACCCTGGA +
Preference number: 1 (lower is better)
Translates to: LFPDSLAKPSSTNSS*LDQVPHQDLHLYPG
Trigger: TCCAGGGTACAGATGCAAGTCTTGATGAGGAACTTGATCGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR CCA 90 bp ATCTTGACTCGATCAAGTTCCTCATCAAGACTTGCATCTGTACCCTaGACATCTCTGCTGCTCCCACTGGAGAGTGAGTCTGGAGTCCCT +
Preference number: 1 (lower is better)
Translates to: ILTRSSSSSRLASVP*TSLLLPLESESGVP
Trigger: AGGGACTCCAGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAACTTGATCGAGTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR TCA 90 bp TCCCAGACTCCCTGGCCAAGCCCAGCTCCACTAACTCATCTTGACTCGATCAAGGCTCCCACTGGAGAGTaGGTCTGGAGTCCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: SQTPWPSPAPLTHLDSIKAPTGE*VWSPWH
Trigger: GTGCCAGGGACTCCAGACTCACTCTCCAGTGGGAGC...CTTGATCGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR CAA 90 bp CCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTaGGAGAACGCGCTGACATACTGCTCGGCCACAGTCAGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: PGLEGSRIVLESLAS*ENALTYCSATVSEA
Trigger: AGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR CAA 90 bp ACCATGCTGGTGACATCGCCAGGGTTGGAGGGCAGTAGGATAGTGTaGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCG +
Preference number: 2 (lower is better)
Translates to: TMLVTSPGLEGSRIV*ESLASLENALTYCS
Trigger: CGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGATGTCACCAGCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR TCA 90 bp AGACTTGCATCTGTACCCTGGACATCTCTGCTGCTCCCACTGGAGAGTGAGTCTGTTTGGAGAACGCGCTaGCATACTGCTCGGCCACAG +
Preference number: 2 (lower is better)
Translates to: RLASVPWTSLLLPLESESVWRTR*HTARPQ
Trigger: CTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAAC...AGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR CCA 90 bp TCCCAGACTCCCTGGCCAAGCCCAGCTCCACTAACTCATCTTGACTCGATCAAGCTCCATATACACCCATaGCCTGAGCCACCATGCTGG +
Preference number: 2 (lower is better)
Translates to: SQTPWPSPAPLTHLDSIKLHIHP*PEPPCW
Trigger: CCAGCATGGTGGCTCAGGCCATGGGTGTATATGGAG...CTTGATCGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR CAA 90 bp ATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCCAAGCCCAGCTCCACTAACTCATCT +
Preference number: 2 (lower is better)
Translates to: ILAGKLEPESGKSAS*FPDSLAKPSSTNSS
Trigger: AGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR TCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGATGGAGGCATCATGCTaGCAGGACTGGATCCAAGGA +
Preference number: 2 (lower is better)
Translates to: LEPESGKSASLFPDSLAKMEASC*QDWIQG
Trigger: TCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCAT...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
3UTR-3UTR GCA 90 bp CCATTCTGTGATCACAGGGGGATAAAAATCAGAGATCACCGATACGGAGAAGAAAGAATCAGGAAAATCTaGTTCCTTGTTCCCAGACTC +
Preference number: 2 (lower is better)
Translates to: PFCDHRGIKIRDHRYGEERIRKI*FLVPRL
Trigger: GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCT...TTCTTCTCCGTATCGGTGATCTCTGATTTTTATCCCCCTGTGATCACAGAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR GCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAAGAATCAGGAAAATCTaGTTCCTTGTTCCCAGACTC +
Preference number: 2 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKRIRKI*FLVPRL
Trigger: GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCT...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
3UTR-3UTR GCA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGAGAATCAGGAAAATCTaGTTCCTTGTTCCCAGACTC +
Preference number: 2 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLRIRKI*FLVPRL
Trigger: GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCT...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
3UTR-3UTR CAA 90 bp AGACTTGCATCTGTACCCTGGACATCTCTGCTGCTCCCACTGGAGAGTGAGTCTCCTGGCACTGGGGCTTaGGTGAGGGCTCCATATACA +
Preference number: 3 (lower is better)
Translates to: RLASVPWTSLLLPLESESPGTGA*VRAPYT
Trigger: TGTATATGGAGCCCTCACCAAAGCCCCAGTGCCAGG...AGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR GCA 72 bp CATCAAGACTTGCATCTGTACCCTGGACATCTCTGCTaGTCCCACTGGAGAGTGAGTCTGGAGTCCCTGGCA +
Preference number: 3 (lower is better)
Translates to: HQDLHLYPGHLC*SHWRVSLESLA
Trigger: TGCCAGGGACTCCAGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCTTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: LEPESGKSASLFPDSLAKGKSAS*FPDSLA
Trigger: GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCC...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
3UTR TCA 72 bp GACTCCCTGGCCAAGCCCAGCTCCACTAACTCATCTTaGCTCGATCAAGTTCCTCATCAAGACTTGCATCTG +
Preference number: 3 (lower is better)
Translates to: DSLAKPSSTNSS*LDQVPHQDLHL
Trigger: CAGATGCAAGTCTTGATGAGGAACTTGATCGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR CCA 72 bp AATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTaGCCAAGCCCAGCTCCACTAACTCATCTTGACTCG +
Preference number: 3 (lower is better)
Translates to: NQENLLPCSQTP*PSPAPLTHLDS
Trigger: CGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR CAA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCC +
Preference number: 3 (lower is better)
Translates to: VHSYSWRHHADRTGSKENGKSAS*FPDSLA
Trigger: GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCC...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
3UTR GCA 72 bp ACTCATCTTGACTCGATCAAGTTCCTCATCAAGACTTaGATCTGTACCCTGGACATCTCTGCTGCTCCCACT +
Preference number: 3 (lower is better)
Translates to: THLDSIKFLIKT*ICTLDISAAPT
Trigger: AGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAACTTGATCGAGTCAAGATGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: LEPESGKSASLFPDSLAKIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
3UTR-3UTR CAA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
3UTR CCA 72 bp TCCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTaGTTTGCCACTGGTGAGTTTATTACACGACTAAAG +
Preference number: 3 (lower is better)
Translates to: SQLHSPIKEDSF*FATGEFITRLK
Trigger: CTTTAGTCGTGTAATAAACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
3UTR-3UTR CAA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 3 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp GTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCCACAGTTGGAGTCCCTGGCACTaGGGCTTTGGTGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VGVLGQFGERADILLGHSWSPWH*GFGEGS
Trigger: GGAGCCCTCACCAAAGCCCCAGTGCCAGGGACTCCA...ACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCGCTCCCACTGGAGAGTaGGTCTGGAGTCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSAPTGE*VWSPWH
Trigger: GTGCCAGGGACTCCAGACTCACTCTCCAGTGGGAGC...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCACCACCCAGGCCTCCTaGTGCGGCACGAACAGTACC +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSTTQAS*CGTNST
Trigger: GGTACTGTTCGTGCCGCAGCAGGAGGCCTGGGTGGT...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR GCA 90 bp GTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCCACAGTCCGTTTCCGCCGCTCTaGCTCCACCTGCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: VGVLGQFGERADILLGHSPFPPL*LHLHLH
Trigger: ATGCAGATGCAGGTGGAGGCAGAGCGGCGGAAACGG...ACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp ATGCTGGTGACATCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGGCCTTCGCCAGAACTaGACTGGCCTCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MLVTSPGLEGSRIVLESLGLRQN*TGLSCC
Trigger: GCAGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCC...CAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGATGTCACCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp TCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTTGGAGGTTTGGAGAACGCGCTaGCATACTGCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: SPGLEGSRIVLESLASLEVWRTR*HTARPQ
Trigger: CTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAAC...CTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp GATAGTGTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCGCACTGGGGCTTTGGTaGGGGCTCCATATACACCCA +
Preference number: 4 (lower is better)
Translates to: DSVGVLGQFGERADILLGALGLW*GLHIHP
Trigger: TGGGTGTATATGGAGCCCTCACCAAAGCCCCAGTGC...GCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGCTCCCACTGGAGAGTaGGTCTGGAGTCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLAAPTGE*VWSPWH
Trigger: GTGCCAGGGACTCCAGACTCACTCTCCAGTGGGAGC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGGCTCCCACTGGAGAGTaGGTCTGGAGTCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKAPTGE*VWSPWH
Trigger: GTGCCAGGGACTCCAGACTCACTCTCCAGTGGGAGC...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGACCACCCAGGCCTCCTaGTGCGGCACGAACAGTACC +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKTTQAS*CGTNST
Trigger: GGTACTGTTCGTGCCGCAGCAGGAGGCCTGGGTGGT...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR GCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGGGCCTTCGCCAGAACTaGACTGGCCTCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKGLRQN*TGLSCC
Trigger: GCAGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCC...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCGGCCTTCGCCAGAACTaGACTGGCCTCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGGLRQN*TGLSCC
Trigger: GCAGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCC...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGGCTCCAGGATCCGGTaGAATCGGCCCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLGSRIR*NRPIRS
Trigger: GGAGCGAATGGGCCGATTCCACCGGATCCTGGAGCC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR CCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTGGAGTCCCTGGCACTaGGGCTTTGGTGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKWSPWH*GFGEGS
Trigger: GGAGCCCTCACCAAAGCCCCAGTGCCAGGGACTCCA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCTGGAGTCCCTGGCACTaGGGCTTTGGTGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLWSPWH*GFGEGS
Trigger: GGAGCCCTCACCAAAGCCCCAGTGCCAGGGACTCCA...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
3UTR CAA 72 bp GAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTaGGAGAACGCGCTGACATACTGCTCGGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: EGSRIVLESLAS*ENALTYCSATV
Trigger: GACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
3UTR CAA 72 bp GTGACATCGCCAGGGTTGGAGGGCAGTAGGATAGTGTaGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACA +
Preference number: 4 (lower is better)
Translates to: VTSPGLEGSRIV*ESLASLENALT
Trigger: TGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGATGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCGTTTGGAGAACGCGCTaGCATACTGCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQAVWRTR*HTARPQ
Trigger: CTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAAC...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCCACAGTCAGTAACGCGCTGACATACTaGTCGGCCACAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: ESLASLENALTYCSATVSNALTY*SATVSE
Trigger: TTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTT...ACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCCCTGGACATCTCTGCTaGTCCCACTGGAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSPGHLC*SHWRVS
Trigger: ACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGG...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCTCGCCAGAACTGCACTaGCCTCTCCTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQASPELH*PLLLPD
Trigger: ATCAGGCAGCAGGAGAGGCCAGTGCAGTTCTGGCGA...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp TCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTTGGAGCTTGCATCTGTACCCTaGACATCTCTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SPGLEGSRIVLESLASLELASVP*TSLLLP
Trigger: TGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAG...CTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGTTTGGAGAACGCGCTaGCATACTGCTCGGCCACAG +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLAVWRTR*HTARPQ
Trigger: CTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAAC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCATGGAGGCATCATGCTaGCAGGACTGGATCCAAGGA +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSMEASC*QDWIQG
Trigger: TCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCAT...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTACCCAGGCCTCCTGCTaGGGCACGAACAGTACCACG +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSTQASC*GTNSTT
Trigger: CGTGGTACTGTTCGTGCCGCAGCAGGAGGCCTGGGT...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR GCA 90 bp GAGAACGCGCTGACATACTGCTCGGCCACAGTCAGTGAAGCTGCTGCATCTCCACTGTTTCTTCCCTTCTaGCACATTGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: ENALTYCSATVSEAAASPLFLPF*HIDGRL
Trigger: GAGTCGGCCATCAATGTGGCAGAAGGGAAGAAACAG...TGGAGATGCAGCAGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTGGCCTTCGCCAGAACTaGACTGGCCTCTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSGLRQN*TGLSCC
Trigger: GCAGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCC...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTGGCTCCAGGATCCGGTaGAATCGGCCCATTCGCTCC +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSGSRIR*NRPIRS
Trigger: GGAGCGAATGGGCCGATTCCACCGGATCCTGGAGCC...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR CCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAGACTCTAGAACTGTaGCCCGTTTCCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGQTLEL*PVSAAL
Trigger: CAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTG...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCAGACTCTAGAACTGTaGCCCGTTTCCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLQTLEL*PVSAAL
Trigger: CAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTG...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCAGACTCTAGAACTGTaGCCCGTTTCCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKQTLEL*PVSAAL
Trigger: CAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTG...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCTCGCCAGAACTGCACTaGCCTCTCCTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLSPELH*PLLLPD
Trigger: ATCAGGCAGCAGGAGAGGCCAGTGCAGTTCTGGCGA...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTCGCCAGAACTGCACTaGCCTCTCCTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKSPELH*PLLLPD
Trigger: ATCAGGCAGCAGGAGAGGCCAGTGCAGTTCTGGCGA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCGGTCTAACACAGGGATaGGGATGTTCAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSGLTQG*GCSNQA
Trigger: AGCCTGGTTTGAACATCCTCATCCCTGTGTTAGACC...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR TCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTTTGAGCTAGCTGGGTaGCGGCATACTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKFELAG*RHTQGP
Trigger: AGGACCCTGAGTATGCCGTCACCCAGCTAGCTCAAA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCTTTGAGCTAGCTGGGTaGCGGCATACTCAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGFELAG*RHTQGP
Trigger: AGGACCCTGAGTATGCCGTCACCCAGCTAGCTCAAA...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCGAGTTTGCCGAGCTCTaGTCTCATGGTTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSEFAEL*SHGCLS
Trigger: GCTCAAACAACCATGAGATCAGAGCTCGGCAAACTC...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCGGAACTCTCTCCCTTCTGCCACATTaGTGGCCGACTCTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: NKKDHVIWLNRAHRGGTLSLLPH*WPTLGS
Trigger: GGACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGA...GAGAGTTCCGCCTCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTTCCCTTCTGCCACATTaGTGGCCGACTCTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSSLLPH*WPTLGS
Trigger: GGACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGA...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCTCGGCCACAGTCAGTaGAGCTGCTGCATCTCCATT +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGLGHSQ*SCCISI
Trigger: AATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAG...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCATGGAGGCATCATGCTaGCAGGACTGGATCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQAMEASC*QDWIQG
Trigger: TCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCAT...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAACCCAGGCCTCCTGCTaGGGCACGAACAGTACCACG +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKETQASC*GTNSTT
Trigger: CGTGGTACTGTTCGTGCCGCAGCAGGAGGCCTGGGT...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR GCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGCCTCCACCTGCATCTaGATAGACTCTTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLAASTCI*IDSFTR
Trigger: CCGGGTGAAAGAGTCTATGCAGATGCAGGTGGAGGC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCGCCTCCACCTGCATCTaGATAGACTCTTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGASTCI*IDSFTR
Trigger: CCGGGTGAAAGAGTCTATGCAGATGCAGGTGGAGGC...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp AGACTTGCATCTGTACCCTGGACATCTCTGCTGCTCCCACTGGAGAGTGAGTCTCGCTCTGCCTCCACCTaGATCTGCATAGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: RLASVPWTSLLLPLESESRSAST*ICIDSF
Trigger: GAAAGAGTCTATGCAGATGCAGGTGGAGGCAGAGCG...AGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCACTGGCCTCTCCTGCTaGCTGATTTATCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSTGLSC*LIYLFS
Trigger: GCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGT...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCCACAGTATGTTGTGTCAGAGCTaGAGCCAGGATTCGAATAGC +
Preference number: 4 (lower is better)
Translates to: VGVLGQFGERADILLGHSMLCQS*SQDSNS
Trigger: GCTATTCGAATCCTGGCTGCAGCTCTGACACAACAT...ACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCAACGCGCTGACATACTaGTCGGCCACAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQANALTY*SATVSE
Trigger: TTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTT...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCTACCCTGGACATCTCTaGTGCTCCCACTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLYPGHL*CSHWRV
Trigger: CACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTA...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCTACCCTGGACATCTCTaGTGCTCCCACTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLAYPGHL*CSHWRV
Trigger: CACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTA...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCTCCATATACACCCATaGCCTGAGCCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKLHIHP*PEPPCW
Trigger: CCAGCATGGTGGCTCAGGCCATGGGTGTATATGGAG...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGATCTCATGGTTGTTTaGGCTAGCTGGGTGACGGCA +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLADLMVV*ASWVTA
Trigger: TGCCGTCACCCAGCTAGCTCAAACAACCATGAGATC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCGCACATGGATATCCTTaGTCTCATAACGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQAAHGYP*SHNGGS
Trigger: GCTGCCTCCGTTATGAGATCAAGGATATCCATGTGC...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACTCCCTTCTGCCACATTaGTGGCCGACTCTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDSLLPH*WPTLGS
Trigger: GGACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGA...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTGCACTGGGGCTTTGGTaGGGGCTCCATATACACCCA +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSALGLW*GLHIHP
Trigger: TGGGTGTATATGGAGCCCTCACCAAAGCCCCAGTGC...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCATGTTGTGTCAGAGCTaGAGCCAGGATTCGAATAGC +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSMLCQS*SQDSNS
Trigger: GCTATTCGAATCCTGGCTGCAGCTCTGACACAACAT...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGAACGCGCTGACATACTaGTCGGCCACAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKNALTY*SATVSE
Trigger: TTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTT...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCTCTTTCACCCGGGGTaGCACATGGATATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQALFHPG*HMDILD
Trigger: ATCAAGGATATCCATGTGCCACCCCGGGTGAAAGAG...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGGTCTAACACAGGGATaGGGATGTTCAAACCAGGCT +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLAGLTQG*GCSNQA
Trigger: AGCCTGGTTTGAACATCCTCATCCCTGTGTTAGACC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS-3UTR TCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGGAGTTTGCCGAGCTCTaGTCTCATGGTTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKEFAEL*SHGCLS
Trigger: GCTCAAACAACCATGAGATCAGAGCTCGGCAAACTC...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATTCCCTTCTGCCACATTaGTGGCCGACTCTCGGGTCC +
Preference number: 4 (lower is better)
Translates to: VHSYSWRHHADRTGSKENSLLPH*WPTLGS
Trigger: GGACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGA...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCGGAACTCTCCTCGGCCACAGTCAGTaGAGCTGCTGCATCTCCATT +
Preference number: 4 (lower is better)
Translates to: NKKDHVIWLNRAHRGGTLLGHSQ*SCCISI
Trigger: AATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAG...GAGAGTTCCGCCTCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAGCACTGGGGCTTTGGTaGGGGCTCCATATACACCCA +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEALGLW*GLHIHP
Trigger: TGGGTGTATATGGAGCCCTCACCAAAGCCCCAGTGC...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGCTCCCACTGGAGAGTaGGTCTGGAGTCCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLAPTGE*VWSPWH
Trigger: GTGCCAGGGACTCCAGACTCACTCTCCAGTGGGAGC...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp CATCTGTACCCTGGACATCTCTGCTGCTCCCACTGGAGAGTGAGTCTGGAGTCCTCCACTAACTCATCTTaGCTCGATCAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLYPGHLCCSHWRVSLESSTNSS*LDQVPH
Trigger: ATGAGGAACTTGATCGAGTCAAGATGAGTTAGTGGA...GGACTCCAGACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTACAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGGTCTAACACAGGGATaGGGATGTTCAAACCCCTCA +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLGLTQG*GCSNPS
Trigger: TGAGGGGTTTGAACATCCTCATCCCTGTGTTAGACC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCTGTCCAGAGAGAGTTTaGCGAGCTCTGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGCPERV*RALISW
Trigger: CCATGAGATCAGAGCTCGGCAAACTCTCTCTGGACA...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAACCGTTTCCGCCGCTCTaGCTCCACCTGCATCTGCAT +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKPFPPL*LHLHLH
Trigger: ATGCAGATGCAGGTGGAGGCAGAGCGGCGGAAACGG...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR GCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCTGTTTCTTCCCTTCTaGCACATTGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKLFLPF*HIDGRL
Trigger: GAGTCGGCCATCAATGTGGCAGAAGGGAAGAAACAG...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCACTGGCCTCTCCTGCTaGCTGATTTATCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLATGLSC*LIYLFS
Trigger: GCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGT...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCTGCACTGGCCTCTCCTaGTGCCTGATTTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGCTGLS*CLIYLF
Trigger: GAACAGATAAATCAGGCAGCAGGAGAGGCCAGTGCA...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp AATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCGGAACTCTCCCTGGACATCTCTGCTaGTCCCACTGGAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: NKKDHVIWLNRAHRGGTLPGHLC*SHWRVS
Trigger: ACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGG...GAGAGTTCCGCCTCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTTACCCTGGACATCTCTaGTGCTCCCACTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSYPGHL*CSHWRV
Trigger: CACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTA...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCCACAGTCAGTAGAATCAGGAAAATCTaGTTCCTTGTTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: ESLASLENALTYCSATVSRIRKI*FLVPRL
Trigger: GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCT...ACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCCGTTTCCGCCGCTCTaGCTCCACCCGGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLPFPPL*LHPEDF
Trigger: AAAGTCTTCCGGGTGGAGGCAGAGCGGCGGAAACGG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452248.6
CDS-3UTR CCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCGAGCTCTGATCTCATaGTTGTTTGAGCTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKRALIS*LFELAG
Trigger: CCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCG...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCTCTTTCACCCGGGGTaGCACATGGATATCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKLFHPG*HMDILD
Trigger: ATCAAGGATATCCATGTGCCACCCCGGGTGAAAGAG...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGTGGAGTCCCTGGCACTaGGGCTTTGGTGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLWSPWH*GFGEGS
Trigger: GGAGCCCTCACCAAAGCCCCAGTGCCAGGGACTCCA...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACCTCGGCCACAGTCAGTaGAGCTGCTGCATCTCCATT +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDLGHSQ*SCCISI
Trigger: AATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAG...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAGCACTGGGGCTTTGGTaGGGGCTCCATATACACCCA +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKALGLW*GLHIHP
Trigger: TGGGTGTATATGGAGCCCTCACCAAAGCCCCAGTGC...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp TCCCAGACTCCCTGGCCAAGCCCAGCTCCACTAACTCATCTTGACTCGATCAAGTGCATCTCCATTCTGTaGTCACAGGGGGATAAAAAT +
Preference number: 4 (lower is better)
Translates to: SQTPWPSPAPLTHLDSIKCISIL*SQGDKN
Trigger: ATTTTTATCCCCCTGTGATCACAGAATGGAGATGCA...CTTGATCGAGTCAAGATGAGTTAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCATTTCCTTGAGACTCTaGACATATCGGATCCGGTCT +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQAISLRL*TYRIRS
Trigger: AGACCGGATCCGATATGTGCAGAGTCTCAAGGAAAT...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCGGAACTCTCCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: NKKDHVIWLNRAHRGGTLLFSLF*FGGQDL
Trigger: CAGATCCTGGCCTCCGAAGCAGAAAAGGCTGAACAG...GAGAGTTCCGCCTCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR GCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAACCTGGACATCTCTGCTaGTCCCACTGGAGAGTGAGT +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEPGHLC*SHWRVS
Trigger: ACTCACTCTCCAGTGGGAGCAGCAGAGATGTCCAGG...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCAGAATCAGGAAAATCTaGTTCCTTGTTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PESGKSASLFPDSLAKPSRIRKI*FLVPRL
Trigger: GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCT...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCAGACTCTAGAACTGTaGCCCGTTTCCGCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLQTLEL*PVSAAL
Trigger: CAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTTGTTCCCAGACTCCCTaGCCAAGCCCAGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLCSQTP*PSPAPL
Trigger: TAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGAACA...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCGTTCACTCTTATTCATaGAGGCATCATGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: RARIRKICFLVPRLPGQAVHSYS*RHHADR
Trigger: CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCAAGGACCATGTAATCTaGCTCAACAGAGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLKDHVI*LNRAHR
Trigger: TCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTT...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR TCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTGCACATGGATATCCTTaGTCTCATAACGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSAHGYP*SHNGGS
Trigger: GCTGCCTCCGTTATGAGATCAAGGATATCCATGTGC...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR GCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACAGAGTCACAGCCGACTaGTCAGGCACGTTGATGACA +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDRVTAD*SGTLMT
Trigger: TGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCT...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTTGCACTGGCCTCTCCTaGTGCCTGATTTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSCTGLS*CLIYLF
Trigger: GAACAGATAAATCAGGCAGCAGGAGAGGCCAGTGCA...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAACGCGCTGACATACTaGTCGGCCACAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKENALTY*SATVSE
Trigger: TTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTT...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTTACCCTGGACATCTCTaGTGCTCCCACTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLYPGHL*CSHWRV
Trigger: CACTCTCCAGTGGGAGCAGCAGAGATGTCCAGGGTA...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCTTCCTCATCAAGACTTaGATCTGTACCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGFLIKT*ICTLDI
Trigger: GATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAA...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AAAGCAGTTCACAATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGATCGCCAGAACTGCACTaGCCTCTCCTGCTGCCTGAT +
Preference number: 4 (lower is better)
Translates to: KAVHNKKDHVIWLNRAHRSPELH*PLLLPD
Trigger: ATCAGGCAGCAGGAGAGGCCAGTGCAGTTCTGGCGA...TCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATTGTGAACTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CCA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATCTCCATATACACCCATaGCCTGAGCCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: VHSYSWRHHADRTGSKENLHIHP*PEPPCW
Trigger: CCAGCATGGTGGCTCAGGCCATGGGTGTATATGGAG...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCTCCATATACACCCATaGCCTGAGCCACCATGCTGG +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLLHIHP*PEPPCW
Trigger: CCAGCATGGTGGCTCAGGCCATGGGTGTATATGGAG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AAAGCAGTTCACAATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGATGTTCCCAGACTCCCTaGCCAAGCCCAGCTCCACTA +
Preference number: 4 (lower is better)
Translates to: KAVHNKKDHVIWLNRAHRCSQTP*PSPAPL
Trigger: TAGTGGAGCTGGGCTTGGCCAGGGAGTCTGGGAACA...TCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATTGTGAACTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGTTCACTCTTATTCATaGAGGCATCATGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GREARARIRKICFLVPRLVHSYS*RHHADR
Trigger: CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACGAGTTTGCCGAGCTCTaGTCTCATGGTTGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDEFAEL*SHGCLS
Trigger: GCTCAAACAACCATGAGATCAGAGCTCGGCAAACTC...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCTCCACTAACTCATCTTaGCTCGATCAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: EARARIRKICFLVPRLPGSTNSS*LDQVPH
Trigger: ATGAGGAACTTGATCGAGTCAAGATGAGTTAGTGGA...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTCCACTAACTCATCTTaGCTCGATCAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKSTNSS*LDQVPH
Trigger: ATGAGGAACTTGATCGAGTCAAGATGAGTTAGTGGA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR TCA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCCTGGTTTGCCACTGGTaGGTTTATTACACGACTAAA +
Preference number: 4 (lower is better)
Translates to: KLEPESGKSASLFPDSLALVCHW*VYYTTK
Trigger: TTTAGTCGTGTAATAAACTCACCAGTGGCAAACCAG...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATAGAGTCACAGCCGACTaGTCAGGCACGTTGATGACA +
Preference number: 4 (lower is better)
Translates to: VHSYSWRHHADRTGSKENRVTAD*SGTLMT
Trigger: TGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCT...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAAGAGTCACAGCCGACTaGTCAGGCACGTTGATGACA +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKRVTAD*SGTLMT
Trigger: TGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCT...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGAGGACTCCATCGATTTaGAGAGTTACATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: LEPESGKSASLFPDSLAKRTPSI*RVTLSR
Trigger: TCTCGACAATGTAACTCTGCAAATCGATGGAGTCCT...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCGCTCTGCCTCCACCTaGATCTGCATAGACTCTTTC +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLRSAST*ICIDSF
Trigger: GAAAGAGTCTATGCAGATGCAGGTGGAGGCAGAGCG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACCTGTTTCTTCCCTTCTaGCACATTGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDLFLPF*HIDGRL
Trigger: GAGTCGGCCATCAATGTGGCAGAAGGGAAGAAACAG...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAACTGTTCAGCCTTTTCTaGTTCGGAGGCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKLFSLF*FGGQDL
Trigger: CAGATCCTGGCCTCCGAAGCAGAAAAGGCTGAACAG...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: VHSYSWRHHADRTGSKENLFSLF*FGGQDL
Trigger: CAGATCCTGGCCTCCGAAGCAGAAAAGGCTGAACAG...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAACTGGCCTCTCCTGCTaGCTGATTTATCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKETGLSC*LIYLFS
Trigger: GCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGT...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAATGCACTGGCCTCTCCTaGTGCCTGATTTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKECTGLS*CLIYLF
Trigger: GAACAGATAAATCAGGCAGCAGGAGAGGCCAGTGCA...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAACGAGCTCTGATCTCATaGTTGTTTGAGCTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKERALIS*LFELAG
Trigger: CCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCG...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCTTGCATCTGTACCCTaGACATCTCTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLLASVP*TSLLLP
Trigger: TGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAACTTGCATCTGTACCCTaGACATCTCTGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKLASVP*TSLLLP
Trigger: TGGGAGCAGCAGAGATGTCCAGGGTACAGATGCAAG...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGCACATGGATATCCTTaGTCTCATAACGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLAHGYP*SHNGGS
Trigger: GCTGCCTCCGTTATGAGATCAAGGATATCCATGTGC...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLLFSLF*FGGQDL
Trigger: CAGATCCTGGCCTCCGAAGCAGAAAAGGCTGAACAG...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATACTGGCCTCTCCTGCTaGCTGATTTATCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VHSYSWRHHADRTGSKENTGLSC*LIYLFS
Trigger: GCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGT...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAATGTTGTGTCAGAGCTaGAGCCAGGATTCGAATAGC +
Preference number: 4 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEMLCQS*SQDSNS
Trigger: GCTATTCGAATCCTGGCTGCAGCTCTGACACAACAT...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCAGCAGTCAGCAGCTTaGTTGATGGCATCCACAATG +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLQQSAA*LMASTM
Trigger: CATTGTGGATGCCATCAACCAAGCTGCTGACTGCTG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR CCA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATCAGCAGTCAGCAGCTTaGTTGATGGCATCCACAATG +
Preference number: 4 (lower is better)
Translates to: VHSYSWRHHADRTGSKENQQSAA*LMASTM
Trigger: CATTGTGGATGCCATCAACCAAGCTGCTGACTGCTG...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR TCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACCTGGTTTGCCACTGGTaGGTTTATTACACGACTAAA +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDLVCHW*VYYTTK
Trigger: TTTAGTCGTGTAATAAACTCACCAGTGGCAAACCAG...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGTGTCCAGAGAGAGTTTaGCGAGCTCTGATCTCATGG +
Preference number: 4 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRCPERV*RALISW
Trigger: CCATGAGATCAGAGCTCGGCAAACTCTCTCTGGACA...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAATTCCTCATCAAGACTTaGATCTGTACCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKFLIKT*ICTLDI
Trigger: GATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAA...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTTTCCTCATCAAGACTTaGATCTGTACCCTGGACATC +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLFLIKT*ICTLDI
Trigger: GATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAA...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR GCA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACAGAATCAGGAAAATCTaGTTCCTTGTTCCCAGACTC +
Preference number: 4 (lower is better)
Translates to: YSWRHHADRTGSKENASDRIRKI*FLVPRL
Trigger: GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCT...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGCGAGCTCTGATCTCATaGTTGTTTGAGCTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRRALIS*LFELAG
Trigger: CCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCG...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCACTCTTATTCATaGAGGCATCATGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLVHSYS*RHHADR
Trigger: CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAATCCACTAACTCATCTTaGCTCGATCAAGTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKSTNSS*LDQVPH
Trigger: ATGAGGAACTTGATCGAGTCAAGATGAGTTAGTGGA...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR TCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCTGGTTTGCCACTGGTaGGTTTATTACACGACTAAA +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLLVCHW*VYYTTK
Trigger: TTTAGTCGTGTAATAAACTCACCAGTGGCAAACCAG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR GCA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTAGGACTCCATCGATTTaGAGAGTTACATTGTCGAGA +
Preference number: 4 (lower is better)
Translates to: NQNLGREARARIRKICFLRTPSI*RVTLSR
Trigger: TCTCGACAATGTAACTCTGCAAATCGATGGAGTCCT...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS TCA 90 bp TCTCATAACGGAGGCAGCGGATACCCCAGCAGTCAGCAGCTTGGTTaGTGGCATCCACAATGCTGGCATTCAGGGACTCCCGTTCCCGGA +
Preference number: 5 (lower is better)
Translates to: SHNGGSGYPSSQQLG*WHPQCWHSGTPVPG
Trigger: TCCGGGAACGGGAGTCCCTGAATGCCAGCATTGTGGATGCCATCAACCAAGCTGCTGACTGCTGGGGTATCCGCTGCCTCCGTTATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR CAA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCCCCGAGCCTTTCCTCTaGCAGTTCCGCTCCCCCGGA +
Preference number: 5 (lower is better)
Translates to: KLEPESGKSASLFPDSLAPEPFL*QFRSPG
Trigger: TCCGGGGGAGCGGAACTGCAAGAGGAAAGGCTCGGG...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp GATAGTGTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCGGGGCCTCTCACATGTaGTGTCAGAGCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: DSVGVLGQFGERADILLGGASHM*CQSCSQ
Trigger: CTGGCTGCAGCTCTGACACAACATGTGAGAGGCCCC...GCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS CCA 90 bp CCGCTCTGCCTCCACCTGCATCTGCATAGACTCTTTCACCCGGGGTaGCACATGGATATCCTTGATCTCATAACGGAGGCAGCGGATACC +
Preference number: 5 (lower is better)
Translates to: PLCLHLHLHRLFHPG*HMDILDLITEAADT
Trigger: GGTATCCGCTGCCTCCGTTATGAGATCAAGGATATCCATGTGCCACCCCGGGTGAAAGAGTCTATGCAGATGCAGGTGGAGGCAGAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR CAA 90 bp TCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTTGGAGGCTTCAGCTTTAGCCTaGGCCTTCGCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: SPGLEGSRIVLESLASLEASALA*AFARTA
Trigger: TGCAGTTCTGGCGAAGGCCAAGGCTAAAGCTGAAGC...CTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CAA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCCCTGGCACTGGGGCTTaGGTGAGGGCTCCATATACA +
Preference number: 5 (lower is better)
Translates to: PESGKSASLFPDSLAKPSPGTGA*VRAPYT
Trigger: TGTATATGGAGCCCTCACCAAAGCCCCAGTGCCAGG...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS TCA 90 bp GGCCAGTTTGGAGAACGCGCTGACATACTGCTCGGCCACAGTCAGTaGAGCTGCTGCATCTCCATTATGTTGTGTCAGAGCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GQFGERADILLGHSQ*SCCISIMLCQSCSQ
Trigger: CTGGCTGCAGCTCTGACACAACATAATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS GCA 90 bp TGCACTGGCCTCTCCTGCTGCCTGATTTATCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGGATCTGGGCCTGTTTCTTCCCTTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: CTGLSCCLIYLFSLF*FGGQDLGLFLPFCH
Trigger: GTGGCAGAAGGGAAGAAACAGGCCCAGATCCTGGCCTCCGAAGCAGAAAAGGCTGAACAGATAAATCAGGCAGCAGGAGAGGCCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCGAGTCCTTGGCCAGTTaGGAGAACGCGCTGACATAC +
Preference number: 5 (lower is better)
Translates to: PESGKSASLFPDSLAKPSESLAS*ENALTY
Trigger: GTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTC...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp ATGCTGGTGACATCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGAGTCCTTGGCCAGTTaGGAGAACGCGCTGACATAC +
Preference number: 5 (lower is better)
Translates to: MLVTSPGLEGSRIVLESLESLAS*ENALTY
Trigger: GTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTC...CAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGATGTCACCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CAA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCCTGGCACTGGGGCTTaGGTGAGGGCTCCATATACA +
Preference number: 5 (lower is better)
Translates to: RARIRKICFLVPRLPGQAPGTGA*VRAPYT
Trigger: TGTATATGGAGCCCTCACCAAAGCCCCAGTGCCAGG...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp CCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCCAGCGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PESGKSASLFPDSLAKPSGKSAS*FPDSLA
Trigger: GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCC...GCTGGGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp GAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCTTCCCTTCTGCCACATaGATGGCCGACTCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: EARARIRKICFLVPRLPGFPSAT*MADSRV
Trigger: GACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGAA...GCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCACTGGGGCTTaGGTGAGGGCTCCATATACA +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLPGTGA*VRAPYT
Trigger: TGTATATGGAGCCCTCACCAAAGCCCCAGTGCCAGG...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS TCA 90 bp AGAGTTTGCCGAGCTCTGATCTCATGGTTGTTTGAGCTAGCTGGGTaGCGGCATACTCAGGGTCCTCCACACCGTAGCTTGCCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: RVCRALISWLFELAG*RHTQGPPHRSLPCK
Trigger: CTTACAAGGCAAGCTACGGTGTGGAGGACCCTGAGTATGCCGTCACCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCGGCAAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCGTTCCCGGAAGACTTaGTCCAGAGAGAGTTTGCCG +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLRSRKT*SRESLP
Trigger: CGGCAAACTCTCTCTGGACAAAGTCTTCCGGGAACG...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGCTTCAGCTTTAGCCTaGGCCTTCGCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLASALA*AFARTA
Trigger: TGCAGTTCTGGCGAAGGCCAAGGCTAAAGCTGAAGC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGCTTCAGCTTTAGCCTaGGCCTTCGCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: KLEPESGKSASLFPDSLAASALA*AFARTA
Trigger: TGCAGTTCTGGCGAAGGCCAAGGCTAAAGCTGAAGC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGAGTCCTTGGCCAGTTaGGAGAACGCGCTGACATAC +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLESLAS*ENALTY
Trigger: GTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCGGCAGTAGGATAGTGTaGGAGTCCTTGGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: RARIRKICFLVPRLPGQAGSRIV*ESLASL
Trigger: CAAACTGGCCAAGGACTCCAACACTATCCTACTGCC...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp TCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTTGGAGGTTCCTCATCAAGACTaGCATCTGTACCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: SPGLEGSRIVLESLASLEVPHQD*HLYPGH
Trigger: ATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAAC...CTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLGKSAS*FPDSLA
Trigger: GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATCCCGAGCCTTTCCTCTaGCAGTTCCGCTCCCCCGGA +
Preference number: 5 (lower is better)
Translates to: VHSYSWRHHADRTGSKENPEPFL*QFRSPG
Trigger: TCCGGGGGAGCGGAACTGCAAGAGGAAAGGCTCGGG...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCAGCAGTCAGCAGCTaGGTTGATGGCATCCACAAT +
Preference number: 5 (lower is better)
Translates to: LEPESGKSASLFPDSLAKPAVSS*VDGIHN
Trigger: ATTGTGGATGCCATCAACCAAGCTGCTGACTGCTGG...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCGGCAGTAGGATAGTGTaGGAGTCCTTGGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLGSRIV*ESLASL
Trigger: CAAACTGGCCAAGGACTCCAACACTATCCTACTGCC...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS GCA 90 bp ATAGTGTTGGAGTCCTTGGCCAGTTTGGAGAACGCGCTGACATACTaGTCGGCCACAGTCAGTGAAGCTGCTGCATCTCCATTATGTTGT +
Preference number: 5 (lower is better)
Translates to: IVLESLASLENALTY*SATVSEAAASPLCC
Trigger: ACAACATAATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTCCAACACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTTGTCCAGAGAGAGTTaGCCGAGCTCTGATCTCATG +
Preference number: 5 (lower is better)
Translates to: LEPESGKSASLFPDSLAKLSRES*PSSDLM
Trigger: CATGAGATCAGAGCTCGGCAAACTCTCTCTGGACAA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTGCATCTCCATTATGTaGTGTCAGAGCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: LEPESGKSASLFPDSLAKCISIM*CQSCSQ
Trigger: CTGGCTGCAGCTCTGACACAACATAATGGAGATGCA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTGAGTCCTTGGCCAGTTaGGAGAACGCGCTGACATAC +
Preference number: 5 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSESLAS*ENALTY
Trigger: GTATGTCAGCGCGTTCTCCAAACTGGCCAAGGACTC...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAACCTGGCACTGGGGCTTaGGTGAGGGCTCCATATACA +
Preference number: 5 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEPGTGA*VRAPYT
Trigger: TGTATATGGAGCCCTCACCAAAGCCCCAGTGCCAGG...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp TCGCCAGGGTTGGAGGGCAGTAGGATAGTGTTGGAGTCCTTGGCCAGTTTGGAGATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: SPGLEGSRIVLESLASLEIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...CTCCAAACTGGCCAAGGACTCCAACACTATCCTACTGCCCTCCAACCCTGGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CAA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTTCCACCCGGAAGACTTaGTCCAGAGAGAGTTTGCCG +
Preference number: 5 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSSTRKT*SRESLP
Trigger: CGGCAAACTCTCTCTGGACAAAGTCTTCCGGGTGGA...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452248.6
CDS CCA 90 bp TCTAACACAGGGATGAGGATGTTCAAACCCTGGAAAGAGGAGTCATaGGTCCTCAGAAGGCTGGGAACTATTGGGTTGGGACCTAAGCTA +
Preference number: 5 (lower is better)
Translates to: SNTGMRMFKPWKEES*VLRRLGTIGLGPKL
Trigger: TAGCTTAGGTCCCAACCCAATAGTTCCCAGCCTTCTGAGGACCCATGACTCCTCTTTCCAGGGTTTGAACATCCTCATCCCTGTGTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487490.1
CDS-3UTR CAA 90 bp AAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCGACTGCTCAGGCACGTaGATGACAATTTCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: KLEPESGKSASLFPDSLADCSGT*MTISLR
Trigger: TCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTC...GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp GTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATTTCCCTTCTGCCACATaGATGGCCGACTCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: VHSYSWRHHADRTGSKENFPSAT*MADSRV
Trigger: GACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGAA...ATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGGTTCCTCATCAAGACTaGCATCTGTACCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: LEPESGKSASLFPDSLAKVPHQD*HLYPGH
Trigger: ATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAAC...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEGKSAS*FPDSLA
Trigger: GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCC...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS GCA 90 bp ACAGCCGACTGCTCAGGCACGTTGATGACAATTTCCTTGAGACTCTaGACATATCGGATCCGGTCTAACACAGGGATGAGGATGTTCAAA +
Preference number: 5 (lower is better)
Translates to: TADCSGTLMTISLRL*TYRIRSNTGMRMFK
Trigger: TTTGAACATCCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS-3UTR CAA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTCGTTCCCGGAAGACTTaGTCCAGAGAGAGTTTGCCG +
Preference number: 5 (lower is better)
Translates to: NQNLGREARARIRKICFLRSRKT*SRESLP
Trigger: CGGCAAACTCTCTCTGGACAAAGTCTTCCGGGAACG...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS-3UTR CAA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTTGCATCTCCATTATGTaGTGTCAGAGCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSCISIM*CQSCSQ
Trigger: CTGGCTGCAGCTCTGACACAACATAATGGAGATGCA...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGCCATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: RARIRKICFLVPRLPGQAIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...GGCTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS CCA 90 bp TGGGGAATGAAGAAAGCAGTTCACAATAAAAAGGACCATGTAATCTaGCTCAACAGAGCCCACAGAGGCGGAACTCTCCTCAAGCGTAGA +
Preference number: 5 (lower is better)
Translates to: WGMKKAVHNKKDHVI*LNRAHRGGTLLKRR
Trigger: TCTACGCTTGAGGAGAGTTCCGCCTCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATTGTGAACTGCTTTCTTCATTCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCTTGATGACAATTTCCTaGAGACTCTGCACATATCGG +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLLMTIS*RLCTYR
Trigger: CCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAA...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCCCTGGCCAAGTTGATGACAATTTCCTaGAGACTCTGCACATATCGG +
Preference number: 5 (lower is better)
Translates to: LEPESGKSASLFPDSLAKLMTIS*RLCTYR
Trigger: CCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAA...CTTGGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGTTCCCTTCTGCCACATaGATGGCCGACTCTCGGGTC +
Preference number: 5 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRFPSAT*MADSRV
Trigger: GACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGAA...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGCTTCAGCTTTAGCCTaGGCCTTCGCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLASALA*AFARTA
Trigger: TGCAGTTCTGGCGAAGGCCAAGGCTAAAGCTGAAGC...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp TCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGGAAAATCTGCTTCCTaGTTCCCAGACTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: SLYKKFTLIHGGIMLTGLGKSAS*FPDSLA
Trigger: GGCCAGGGAGTCTGGGAACAAGGAAGCAGATTTTCC...CAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp GGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTGTTCCCAGACTCATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GREARARIRKICFLVPRLIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...GAGTCTGGGAACAAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS-3UTR CAA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACGACTGCTCAGGCACGTaGATGACAATTTCCTTGAGA +
Preference number: 5 (lower is better)
Translates to: YSWRHHADRTGSKENASDDCSGT*MTISLR
Trigger: TCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTC...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp CCCAACTTCATTCCCCAATCAAAGAGGACAGTTTCTGGTTTGCCACTGGTGAGTAAGGACTCCATCGATTaGCAGAGTTACATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: PNFIPQSKRTVSGLPLVSKDSID*QSYIVE
Trigger: CTCGACAATGTAACTCTGCAAATCGATGGAGTCCTT...ACTCACCAGTGGCAAACCAGAAACTGTCCTCTTTGATTGGGGAATGAAGTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAATTGTCCAGAGAGAGTTaGCCGAGCTCTGATCTCATG +
Preference number: 5 (lower is better)
Translates to: KFTLIHGGIMLTGLDPRKLSRES*PSSDLM
Trigger: CATGAGATCAGAGCTCGGCAAACTCTCTCTGGACAA...TTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTTGCATCTCCATTATGTaGTGTCAGAGCTGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: NQNLGREARARIRKICFLCISIM*CQSCSQ
Trigger: CTGGCTGCAGCTCTGACACAACATAATGGAGATGCA...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AAAGCAGTTCACAATAAAAAGGACCATGTAATCTGGCTCAACAGAGCCCACAGAGGCAGTAGGATAGTGTaGGAGTCCTTGGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: KAVHNKKDHVIWLNRAHRGSRIV*ESLASL
Trigger: CAAACTGGCCAAGGACTCCAACACTATCCTACTGCC...TCTGTGGGCTCTGTTGAGCCAGATTACATGGTCCTTTTTATTGTGAACTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488050.1
CDS-3UTR CAA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAGTTCCTCATCAAGACTaGCATCTGTACCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEVPHQD*HLYPGH
Trigger: ATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAAC...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGCCAGCAGTCAGCAGCTaGGTTGATGGCATCCACAAT +
Preference number: 5 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRPAVSS*VDGIHN
Trigger: ATTGTGGATGCCATCAACCAAGCTGCTGACTGCTGG...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619795.4
CDS-3UTR CAA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGGGCAGTAGGATAGTGTaGGAGTCCTTGGCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRGSRIV*ESLASL
Trigger: CAAACTGGCCAAGGACTCCAACACTATCCTACTGCC...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp TATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAAATGCTAGTGACTTGATGACAATTTCCTaGAGACTCTGCACATATCGG +
Preference number: 5 (lower is better)
Translates to: YSWRHHADRTGSKENASDLMTIS*RLCTYR
Trigger: CCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAA...GTCACTAGCATTTTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AACCAAAATCTTGGCAGGGAAGCTAGAGCCAGAATCAGGAAAATCTGCTTCCTTAAGGACTCCATCGATTaGCAGAGTTACATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: NQNLGREARARIRKICFLKDSID*QSYIVE
Trigger: CTCGACAATGTAACTCTGCAAATCGATGGAGTCCTT...AAGGAAGCAGATTTTCCTGATTCTGGCTCTAGCTTCCCTGCCAAGATTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGTTGTCCAGAGAGAGTTaGCCGAGCTCTGATCTCATG +
Preference number: 5 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRLSRES*PSSDLM
Trigger: CATGAGATCAGAGCTCGGCAAACTCTCTCTGGACAA...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp GAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGACTGGATCCAAGGAAATAAAAACCAAAATCTaGGCAGGGAAGCTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: EVHSYSWRHHADRTGSKEIKTKI*AGKLEP
Trigger: TGGCTCTAGCTTCCCTGCCAAGATTTTGGTTTTTAT...TTCCTTGGATCCAGTCCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGGTTCCTCATCAAGACTaGCATCTGTACCCTGGACAT +
Preference number: 5 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRVPHQD*HLYPGH
Trigger: ATGTCCAGGGTACAGATGCAAGTCTTGATGAGGAAC...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS-3UTR CAA 90 bp AGTTTCACTTTACAAGAAGTTCACTCTTATTCATGGAGGCATCATGCTGACAGGAAGGACTCCATCGATTaGCAGAGTTACATTGTCGAG +
Preference number: 5 (lower is better)
Translates to: SFTLQEVHSYSWRHHADRKDSID*QSYIVE
Trigger: CTCGACAATGTAACTCTGCAAATCGATGGAGTCCTT...CCTGTCAGCATGATGCCTCCATGAATAAGAGTGAACTTCTTGTAAAGTGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452248.6
ENST00000619795.4
CDS CCA 72 bp TGGCCGACTCTCGGGTCCCCTCAGACTCTAGAACTGTaGCCCGTTTCCGCCGCTCTGCCTCCACCCGGAAGA +
Preference number: 6 (lower is better)
Translates to: WPTLGSPQTLEL*PVSAALPPPGR
Trigger: TCTTCCGGGTGGAGGCAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTGAGGGGACCCGAGAGTCGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452248.6
CDS CCA 72 bp TGGCCGACTCTCGGGTCCCCTCAGACTCTAGAACTGTaGCCCGTTTCCGCCGCTCTGCCTCCACCTGCATCT +
Preference number: 6 (lower is better)
Translates to: WPTLGSPQTLEL*PVSAALPPPAS
Trigger: AGATGCAGGTGGAGGCAGAGCGGCGGAAACGGGCCACAGTTCTAGAGTCTGAGGGGACCCGAGAGTCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS GCA 72 bp TTCGGAGGCCAGGATCTGGGCCTGTTTCTTCCCTTCTaGCACATTGATGGCCGACTCTCGGGTCCCCTCAGA +
Preference number: 6 (lower is better)
Translates to: FGGQDLGLFLPF*HIDGRLSGPLR
Trigger: TCTGAGGGGACCCGAGAGTCGGCCATCAATGTGGCAGAAGGGAAGAAACAGGCCCAGATCCTGGCCTCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS CAA 72 bp GCTGCAGCCAGGATTCGAATAGCTTCAGCTTTAGCCTaGGCCTTCGCCAGAACTGCACTGGCCTCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: AAARIRIASALA*AFARTALASPA
Trigger: AGCAGGAGAGGCCAGTGCAGTTCTGGCGAAGGCCAAGGCTAAAGCTGAAGCTATTCGAATCCTGGCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS CAA 90 bp CTTGATCTCATAACGGAGGCAGCGGATACCCCAGCAGTCAGCAGCTaGGTTGATGGCATCCACAATGCTGGCATTCAGGGACTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: LDLITEAADTPAVSS*VDGIHNAGIQGLPF
Trigger: GAACGGGAGTCCCTGAATGCCAGCATTGTGGATGCCATCAACCAAGCTGCTGACTGCTGGGGTATCCGCTGCCTCCGTTATGAGATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS TCA 72 bp CGAGCTCTGATCTCATGGTTGTTTGAGCTAGCTGGGTaGCGGCATACTCAGGGTCCTCCACACCGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: RALISWLFELAG*RHTQGPPHRSL
Trigger: CAAGCTACGGTGTGGAGGACCCTGAGTATGCCGTCACCCAGCTAGCTCAAACAACCATGAGATCAGAGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS TCA 72 bp GACTCTGCACATATCGGATCCGGTCTAACACAGGGATaGGGATGTTCAAACCAGGCTCCAGGATCCGGTGGA +
Preference number: 6 (lower is better)
Translates to: DSAHIGSGLTQG*GCSNQAPGSGG
Trigger: TCCACCGGATCCTGGAGCCTGGTTTGAACATCCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000452248.6
CDS TCA 72 bp GGAGAACGCGCTGACATACTGCTCGGCCACAGTCAGTaGAGCTGCTGCATCTCCATTATGTTGTGTCAGAGC +
Preference number: 6 (lower is better)
Translates to: GERADILLGHSQ*SCCISIMLCQS
Trigger: GCTCTGACACAACATAATGGAGATGCAGCAGCTTCACTGACTGTGGCCGAGCAGTATGTCAGCGCGTTCTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000619795.4
CDS GCA 72 bp CTCTCCTGCTGCCTGATTTATCTGTTCAGCCTTTTCTaGTTCGGAGGCCAGGATCTGGGCCTGTTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: LSCCLIYLFSLF*FGGQDLGLFLP
Trigger: GGGAAGAAACAGGCCCAGATCCTGGCCTCCGAAGCAGAAAAGGCTGAACAGATAAATCAGGCAGCAGGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000488050.1
ENST00000619795.4
CDS GCA 72 bp CTGCCTCCACCCGGAAGACTTTGTCCAGAGAGAGTTTaGCGAGCTCTGATCTCATGGTTGTTTGAGCTAGCT +
Preference number: 6 (lower is better)
Translates to: LPPPGRLCPERV*RALISWLFELA
Trigger: AGCTAGCTCAAACAACCATGAGATCAGAGCTCGGCAAACTCTCTCTGGACAAAGTCTTCCGGGTGGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452248.6
CDS CCA 72 bp CTCCACCTGCATCTGCATAGACTCTTTCACCCGGGGTaGCACATGGATATCCTTGATCTCATAACGGAGGCA +
Preference number: 6 (lower is better)
Translates to: LHLHLHRLFHPG*HMDILDLITEA
Trigger: TGCCTCCGTTATGAGATCAAGGATATCCATGTGCCACCCCGGGTGAAAGAGTCTATGCAGATGCAGGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356493.10
ENST00000488050.1
ENST00000619795.4
CDS CCA 72 bp GGGATGAGGATGTTCAAACCCTGGAAAGAGGAGTCATaGGTCCTCAGAAGGCTGGGAACTATTGGGTTGGGA +
Preference number: 6 (lower is better)
Translates to: GMRMFKPWKEES*VLRRLGTIGLG
Trigger: TCCCAACCCAATAGTTCCCAGCCTTCTGAGGACCCATGACTCCTCTTTCCAGGGTTTGAACATCCTCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487490.1
CDS CAA 90 bp TCGAGAGTCACAGCCGACTGCTCAGGCACGTTGATGACAATTTCCTaGAGACTCTGCACATATCGGATCCGGTCTAACACAGGGATGAGG +
Preference number: 6 (lower is better)
Translates to: SRVTADCSGTLMTIS*RLCTYRIRSNTGMR
Trigger: CCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS TCA 72 bp GACTCTGCACATATCGGATCCGGTCTAACACAGGGATaGGGATGTTCAAACCCTGGAAAGAGGAGTCATGGG +
Preference number: 6 (lower is better)
Translates to: DSAHIGSGLTQG*GCSNPGKRSHG
Trigger: CCCATGACTCCTCTTTCCAGGGTTTGAACATCCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487490.1
CDS GCA 72 bp ACTCCCGTTCCCGGAAGACTTTGTCCAGAGAGAGTTTaGCGAGCTCTGATCTCATGGTTGTTTGAGCTAGCT +
Preference number: 6 (lower is better)
Translates to: TPVPGRLCPERV*RALISWLFELA
Trigger: AGCTAGCTCAAACAACCATGAGATCAGAGCTCGGCAAACTCTCTCTGGACAAAGTCTTCCGGGAACGGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356493.10
ENST00000619795.4
CDS CAA 72 bp AGGGTCCATGATGCGCAGGTAAAGGACTCCATCGATTaGCAGAGTTACATTGTCGAGAGTCACAGCCGACTG +
Preference number: 6 (lower is better)
Translates to: RVHDAQVKDSID*QSYIVESHSRL
Trigger: CAGTCGGCTGTGACTCTCGACAATGTAACTCTGCAAATCGATGGAGTCCTTTACCTGCGCATCATGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS CAA 90 bp TGCAGAGTTACATTGTCGAGAGTCACAGCCGACTGCTCAGGCACGTaGATGACAATTTCCTTGAGACTCTGCACATATCGGATCCGGTCT +
Preference number: 6 (lower is better)
Translates to: CRVTLSRVTADCSGT*MTISLRLCTYRIRS
Trigger: AGACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCTCGACAATGTAACTCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS GCA 72 bp TGCTCAGGCACGTTGATGACAATTTCCTTGAGACTCTaGACATATCGGATCCGGTCTAACACAGGGATGAGG +
Preference number: 6 (lower is better)
Translates to: CSGTLMTISLRL*TYRIRSNTGMR
Trigger: CCTCATCCCTGTGTTAGACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS CAA 72 bp ACAGCCGACTGCTCAGGCACGTTGATGACAATTTCCTaGAGACTCTGCACATATCGGATCCGGTCTAACACA +
Preference number: 6 (lower is better)
Translates to: TADCSGTLMTIS*RLCTYRIRSNT
Trigger: TGTGTTAGACCGGATCCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS CAA 72 bp ACATTGTCGAGAGTCACAGCCGACTGCTCAGGCACGTaGATGACAATTTCCTTGAGACTCTGCACATATCGG +
Preference number: 6 (lower is better)
Translates to: TLSRVTADCSGT*MTISLRLCTYR
Trigger: CCGATATGTGCAGAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCTCGACAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS GCA 72 bp ATTTGCAGAGTTACATTGTCGAGAGTCACAGCCGACTaGTCAGGCACGTTGATGACAATTTCCTTGAGACTC +
Preference number: 6 (lower is better)
Translates to: ICRVTLSRVTAD*SGTLMTISLRL
Trigger: GAGTCTCAAGGAAATTGTCATCAACGTGCCTGAGCAGTCGGCTGTGACTCTCGACAATGTAACTCTGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356493.10
ENST00000452248.6
ENST00000487490.1
ENST00000619795.4
CDS GCA 72 bp AGTCCTGGAGTATGTAGGGAGTCAACACATGGAACATaGCCAGAAAAGCAGCAGCTCCTACCAAGAAATAAG +
Preference number: 6 (lower is better)
Translates to: SPGVCRESTHGT*PEKQQLLPRNK
Trigger: CTTATTTCTTGGTAGGAGCTGCTGCTTTTCTGGGCATGTTCCATGTGTTGACTCCCTACATACTCCAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487490.1