RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107960

Ensembl transcript IDs: ENST00000224950.8, ENST00000369764.1, ENST00000466828.5, ENST00000472951.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAAGCCAGGGACCTCTGGCTGGTGACGGCCCACCTGGGCCTCGCTTaGCCATGCTACCTGCTGCAGGAGACGGCCCGCCCACTTCACCCG +
Preference number: 1 (lower is better)
Translates to: QARDLWLVTAHLGLA*PCYLLQETARPLHP
Trigger: CGGGTGAAGTGGGCGGGCCGTCTCCTGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTGGGCCGTCACCAGCCAGAGGTCCCTGGCTTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp CTGGGAAGAGGAAATAGCAGGAGCACCAGCCCTAAGGCAGGAATATaGCGAGGCATGTGTGCAAGGCCCGTGCGGCTGGGCTGGGAGGGC +
Preference number: 1 (lower is better)
Translates to: LGRGNSRSTSPKAGI*RGMCARPVRLGWEG
Trigger: GCCCTCCCAGCCCAGCCGCACGGGCCTTGCACACATGCCTCGGCATATTCCTGCCTTAGGGCTGGTGCTCCTGCTATTTCCTCTTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp GTAAGCGGGGCCGTGCTGACCTCTGTGCAGCCTCAGGCTCCTACCTaGGGCAAGACCGAAGGCTGTAGGAGAGTGGGAGCATTAACAGGG +
Preference number: 1 (lower is better)
Translates to: VSGAVLTSVQPQAPT*GKTEGCRRVGALTG
Trigger: CCCTGTTAATGCTCCCACTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGGTCAGCACGGCCCCGCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp TACCTGAGGGCGAGGGAGCTGGGGCATTTACAGCCAAGGTGCTGTTaGCTGAGGCTGCTCCCTGGGGGTGTGACTTCTGAGCACTTCCAG +
Preference number: 1 (lower is better)
Translates to: YLRARELGHLQPRCC*LRLLPGGVTSEHFQ
Trigger: CTGGAAGTGCTCAGAAGTCACACCCCCAGGGAGCAGCCTCAGCCAACAGCACCTTGGCTGTAAATGCCCCAGCTCCCTCGCCCTCAGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp AATGCTTACCTGAGGGCGAGGGAGCTGGGGCATTTACAGCCAAGGTaGTGTTGGCTGAGGCTGCTCCCTGGGGGTGTGACTTCTGAGCAC +
Preference number: 1 (lower is better)
Translates to: NAYLRARELGHLQPR*CWLRLLPGGVTSEH
Trigger: GTGCTCAGAAGTCACACCCCCAGGGAGCAGCCTCAGCCAACAGCACCTTGGCTGTAAATGCCCCAGCTCCCTCGCCCTCAGGTAAGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp AGGGAGGGTGAGGCTGGTGGTTATCAGGTTAGCTGCTCCTGTGGGTaGCTGGGTGGTGCTCAGTCCCACGGAGGAACTGTGGAAAAGAGT +
Preference number: 1 (lower is better)
Translates to: REGEAGGYQVSCSCG*LGGAQSHGGTVEKS
Trigger: ACTCTTTTCCACAGTTCCTCCGTGGGACTGAGCACCACCCAGCCACCCACAGGAGCAGCTAACCTGATAACCACCAGCCTCACCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp GCTCCTGTGGGTGGCTGGGTGGTGCTCAGTCCCACGGAGGAACTGTaGAAAAGAGTATGGAACGTGTGCCTCAGCAATGCTTACCTGAGG +
Preference number: 1 (lower is better)
Translates to: APVGGWVVLSPTEEL*KRVWNVCLSNAYLR
Trigger: CCTCAGGTAAGCATTGCTGAGGCACACGTTCCATACTCTTTTCCACAGTTCCTCCGTGGGACTGAGCACCACCCAGCCACCCACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp ACCACTGCAGAGTTCTTTGTCCACAGACACCATCTCCCTTCAGGATaGTCCTGCTTTTCCCCCAGCACCTGTGCAGGCATCTCTGGCGAG +
Preference number: 1 (lower is better)
Translates to: TTAEFFVHRHHLPSG*SCFSPSTCAGISGE
Trigger: CTCGCCAGAGATGCCTGCACAGGTGCTGGGGGAAAAGCAGGACCATCCTGAAGGGAGATGGTGTCTGTGGACAAAGAACTCTGCAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp CTGGGACTGAGTCCTCAGGGAGGCAGAGCACTGAACAAAGGAACCTaGGAAGGAGCAACCAGAGAGCTTGGTGTCCTGAAAGCCAAACGC +
Preference number: 1 (lower is better)
Translates to: LGLSPQGGRALNKGT*EGATRELGVLKAKR
Trigger: GCGTTTGGCTTTCAGGACACCAAGCTCTCTGGTTGCTCCTTCTCAGGTTCCTTTGTTCAGTGCTCTGCCTCCCTGAGGACTCAGTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp CACGGAGGAACTGTGGAAAAGAGTATGGAACGTGTGCCTCAGCAATaGTTACCTGAGGGCGAGGGAGCTGGGGCATTTACAGCCAAGGTG +
Preference number: 1 (lower is better)
Translates to: HGGTVEKSMERVPQQ*LPEGEGAGAFTAKV
Trigger: CACCTTGGCTGTAAATGCCCCAGCTCCCTCGCCCTCAGGTAAGCATTGCTGAGGCACACGTTCCATACTCTTTTCCACAGTTCCTCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp CTGGGCAGCCCCACTAATCAGATGCATTCAACGTGGAACAGCTGCTaGCCTCAAGGAAGAACTGCCCAGGACATCATTCCAGGCAGACTC +
Preference number: 1 (lower is better)
Translates to: LGSPTNQMHSTWNSC*PQGRTAQDIIPGRL
Trigger: GAGTCTGCCTGGAATGATGTCCTGGGCAGTTCTTCCTTGAGGTCAGCAGCTGTTCCACGTTGAATGCATCTGATTAGTGGGGCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp CTCAGCGGCAACCCTGAAAATAACATCTACCACCTGCCAGGCAATTaGCTGACTGCCTCCGTGATCTTCAGGGGCATCGAGGGACAATGT +
Preference number: 1 (lower is better)
Translates to: LSGNPENNIYHLPGN*LTASVIFRGIEGQC
Trigger: ACATTGTCCCTCGATGCCCCTGAAGATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTGGTAGATGTTATTTTCAGGGTTGCCGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp GATCTTTGCTTGAACGTGGGGTTTCATTTGGGACCCTCCCCTCTCTaGCTAGGCATTTGGCTGCCTCATGTCACTATCAGGAGCAAGCCT +
Preference number: 1 (lower is better)
Translates to: DLCLNVGFHLGPSPL*LGIWLPHVTIRSKP
Trigger: AGGCTTGCTCCTGATAGTGACATGAGGCAGCCAAATGCCTAGGCAGAGAGGGGAGGGTCCCAAATGAAACCCCACGTTCAAGCAAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp AAGCATGACTCCATCACCTGTCTGGGCACATACCGAGTCTTTGTCTaGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAA +
Preference number: 1 (lower is better)
Translates to: KHDSITCLGTYRVFV*MVSAHPAHSAATLK
Trigger: TTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGTCATGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp GAAAAACGAAGTAGGAAAGGGAGTTCTGGGAAGGGGGACAGGAGATaGGTTGCAAACAGCGAAAGAGGAATGAGGGCAGGCCTCACTGAG +
Preference number: 1 (lower is better)
Translates to: EKRSRKGSSGKGDRR*VANSERGMRAGLTE
Trigger: CTCAGTGAGGCCTGCCCTCATTCCTCTTTCGCTGTTTGCAACCCATCTCCTGTCCCCCTTCCCAGAACTCCCTTTCCTACTTCGTTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp TCTGGGCACATACCGAGTCTTTGTCTGGATGGTGTCAGCACATCCTaGACACTCAGCGGCAACCCTGAAAATAACATCTACCACCTGCCA +
Preference number: 1 (lower is better)
Translates to: SGHIPSLCLDGVSTS*TLSGNPENNIYHLP
Trigger: TGGCAGGTGGTAGATGTTATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp AGGAGGCAATCTACTGGTTCTAGCTCTCAGCCTGACGTATCGAGCTaGAGCGGACTTCTGCGTATAAAGACTGTCCTGTTTCCACGGAGA +
Preference number: 1 (lower is better)
Translates to: RRQSTGSSSQPDVSS*SGLLRIKTVLFPRR
Trigger: TCTCCGTGGAAACAGGACAGTCTTTATACGCAGAAGTCCGCTGCAGCTCGATACGTCAGGCTGAGAGCTAGAACCAGTAGATTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp TTCACCCGCCTGGGCCAAGTATGGCTTCCACACTGGTTGAGTTCTTaGCCAGCACCAAAGAAGAATGAGAATGTGCTGACAGTGGAAGAG +
Preference number: 1 (lower is better)
Translates to: FTRLGQVWLPHWLSS*PAPKKNENVLTVEE
Trigger: CTCTTCCACTGTCAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAGCCATACTTGGCCCAGGCGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp CAGAGCACTGAACAAAGGAACCTGAGAAGGAGCAACCAGAGAGCTTaGTGTCCTGAAAGCCAAACGCGGAAAGTACTTCCAGGAGAAGGG +
Preference number: 1 (lower is better)
Translates to: QSTEQRNLRRSNQRA*CPESQTRKVLPGEG
Trigger: CCCTTCTCCTGGAAGTACTTTCCGCGTTTGGCTTTCAGGACACCAAGCTCTCTGGTTGCTCCTTCTCAGGTTCCTTTGTTCAGTGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp AACAATTGGGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTaGGTGGTGGGTTTCATCCAGGACCAGCAATCTGGTCTTTTAGCC +
Preference number: 1 (lower is better)
Translates to: NNWERVGKQEQKFPL*VVGFIQDQQSGLLA
Trigger: GGCTAAAAGACCAGATTGCTGGTCCTGGATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCCCAATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp CAGTCCAGCCAGGAGCTCAACAGGGAGGGTTTTCTTGTTGTGTCATaGCTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGA +
Preference number: 1 (lower is better)
Translates to: QSSQELNREGFLVVS*LRSKSLYTKDIVDR
Trigger: TCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAGCCATGACACAACAAGAAAACCCTCCCTGTTGAGCTCCTGGCTGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp CTTTACCTTGTCATTCTGAGCAAAAGCATGACTCCATCACCTGTCTaGGCACATACCGAGTCTTTGTCTGGATGGTGTCAGCACATCCTG +
Preference number: 1 (lower is better)
Translates to: LYLVILSKSMTPSPV*AHTESLSGWCQHIL
Trigger: CAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGTCATGCTTTTGCTCAGAATGACAAGGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp ATAGGGGTCTGCAGTTCAGGGAAGAGGCCCATTCTGGGTTTAAACTaGGGTGTTAGACAGCATGTAGATGGTATAATCCATGTGGCTGCT +
Preference number: 1 (lower is better)
Translates to: IGVCSSGKRPILGLN*GVRQHVDGIIHVAA
Trigger: AGCAGCCACATGGATTATACCATCTACATGCTGTCTAACACCTCAGTTTAAACCCAGAATGGGCCTCTTCCCTGAACTGCAGACCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp TTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTaGGGACATGGAAGGAAACAAAACAGAGAATTCTGCCATCATGGA +
Preference number: 1 (lower is better)
Translates to: LVVLLRRCVRHCSRC*GHGRKQNREFCHHG
Trigger: TCCATGATGGCAGAATTCTCTGTTTTGTTTCCTTCCATGTCCCCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp ACATTTACAGCCTCCACCAGCAGAAATCATGCAAATAAGAACCACTaGAGAGTTCTTTGTCCACAGACACCATCTCCCTTCAGGATGGTC +
Preference number: 1 (lower is better)
Translates to: TFTASTSRNHANKNH*RVLCPQTPSPFRMV
Trigger: GACCATCCTGAAGGGAGATGGTGTCTGTGGACAAAGAACTCTGCAGTGGTTCTTATTTGCATGATTTCTGCTGGTGGAGGCTGTAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp CCAGACAGTAGCACTATTTGTCTTCTTGCCTACACAAGCTACATGTaGGGTTCACACCTCCTGAAACATGTGCACACTAAGAGAACTGGA +
Preference number: 1 (lower is better)
Translates to: PDSSTICLLAYTSYM*GSHLLKHVHTKRTG
Trigger: TCCAGTTCTCTTAGTGTGCACATGTTTCAGGAGGTGTGAACCCCACATGTAGCTTGTGTAGGCAAGAAGACAAATAGTGCTACTGTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 90 bp TTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTaGTGGGGACATGGAAGGAAACAAAACAGAGAATTCTGCCATCAT +
Preference number: 1 (lower is better)
Translates to: LLVVLLRRCVRHCSR*WGHGRKQNREFCHH
Trigger: ATGATGGCAGAATTCTCTGTTTTGTTTCCTTCCATGTCCCCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 90 bp AAAGGCAACATTCGATTGGTTAAGGCGTTATTCAGAAAGAACAATTaGGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTG +
Preference number: 1 (lower is better)
Translates to: KGNIRLVKALFRKNN*ERVGKQEQKFPLCV
Trigger: CACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCCCAATTGTTCTTTCTGAATAACGCCTTAACCAATCGAATGTTGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp TTTGTCTTCTTGCCTACACAAGCTACATGTGGGGTTCACACCTCCTaGAACATGTGCACACTAAGAGAACTGGAGAATGTTTGCTCAGTT +
Preference number: 1 (lower is better)
Translates to: FVFLPTQATCGVHTS*NMCTLRELENVCSV
Trigger: AACTGAGCAAACATTCTCCAGTTCTCTTAGTGTGCACATGTTTCAGGAGGTGTGAACCCCACATGTAGCTTGTGTAGGCAAGAAGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp TGCCCAGCACCAAAGAAGAATGAGAATGTGCTGACAGTGGAAGAGTaGGCAAAGCTGGGAGTTTTATTGAGTGATGAAACAGTTTTCAAC +
Preference number: 1 (lower is better)
Translates to: CPAPKKNENVLTVEE*AKLGVLLSDETVFN
Trigger: GTTGAAAACTGTTTCATCACTCAATAAAACTCCCAGCTTTGCTCACTCTTCCACTGTCAGCACATTCTCATTCTTCTTTGGTGCTGGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp GTGGCTTACCATATGGGCATAATCATGGCTCTTCAAACAAATCCTTaGCCAGACAGTAGCACTATTTGTCTTCTTGCCTACACAAGCTAC +
Preference number: 1 (lower is better)
Translates to: VAYHMGIIMALQTNP*PDSSTICLLAYTSY
Trigger: GTAGCTTGTGTAGGCAAGAAGACAAATAGTGCTACTGTCTGGTCAAGGATTTGTTTGAAGAGCCATGATTATGCCCATATGGTAAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp ATGCCAAATCCCATTCCCAAGATGACTATATTTTATAGTTTATTATaGGGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAA +
Preference number: 1 (lower is better)
Translates to: MPNPIPKMTIFYSLL*GNCLQTDKPLHDAE
Trigger: TTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACCTCATAATAAACTATAAAATATAGTCATCTTGGGAATGGGATTTGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 90 bp CACCTGAGATCTCACCATGCAGAGGTAACATGTGCATCCCTTTGGTaGGAATTTCTAGTAATCTGTCTGATGTGTATAATTATTCATCCA +
Preference number: 1 (lower is better)
Translates to: HLRSHHAEVTCASLW*EFLVICLMCIIIHP
Trigger: TGGATGAATAATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTTACCTCTGCATGGTGAGATCTCAGGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp GCAAGCCAGGGACCTCTGGCTGGTGACGGCCCACCTGGGCCTCGCTaGACCATGCTACCTGCTGCAGGAGACGGCCCGCCCACTTCACCC +
Preference number: 2 (lower is better)
Translates to: ASQGPLAGDGPPGPR*TMLPAAGDGPPTSP
Trigger: GGGTGAAGTGGGCGGGCCGTCTCCTGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTGGGCCGTCACCAGCCAGAGGTCCCTGGCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CCA 90 bp CCTCTGTGCAGCCTCAGGCTCCTACCTGGGGCAAGACCGAAGGCTGTAGGAGAGCCCACTTCACCCGCCTaGGCCAAGTATGGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PLCSLRLLPGARPKAVGEPTSPA*AKYGFH
Trigger: GTGGAAGCCATACTTGGCCCAGGCGGGTGAAGTGGG...CTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCACACCTGGGCCTCGCTTaGCCATGCTACCTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: RNASGRSACGKGERGSKAHLGLA*PCYLLQ
Trigger: CTGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTG...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp CCTCTGTGCAGCCTCAGGCTCCTACCTGGGGCAAGACCGAAGGCTGTAGGAGAGCTACTAGGGACAGTGTaGCATGGCAACACTGTCTGT +
Preference number: 2 (lower is better)
Translates to: PLCSLRLLPGARPKAVGELLGTV*HGNTVC
Trigger: ACAGACAGTGTTGCCATGGCACACTGTCCCTAGTAG...CTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp CCCGCCCACTTCACCCGCCTGGGCCAAGTATGGCTTCCACACTGGTaGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGACA +
Preference number: 2 (lower is better)
Translates to: PAHFTRLGQVWLPHW*SSCPAPKKNENVLT
Trigger: TGTCAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAGCCATACTTGGCCCAGGCGGGTGAAGTGGGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATGGTGTCAGCACATCCTaGACACTCAGCGGCAACCCT +
Preference number: 2 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHGVSTS*TLSGNP
Trigger: AGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACC...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp AGCAAAAGCATGACTCCATCACCTGTCTGGGCACATACCGAGTCTTaGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCC +
Preference number: 2 (lower is better)
Translates to: SKSMTPSPVWAHTES*SGWCQHILHTQRQP
Trigger: GGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGTCATGCTTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTATGCCCCTCAGTTCCTaGATGTTCACTACCCTGTGG +
Preference number: 2 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTMPLSS*MFTTLW
Trigger: CCACAGGGTAGTGAACATTCAGGAACTGAGGGGCAT...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp TGGAAGGAAACAAAACAGAGAATTCTGCCATCATGGAACATTCTGTCTATTGGGGGGACCTCTGGCTGGTaGCGGCCCACCTGGGCCTCG +
Preference number: 2 (lower is better)
Translates to: WKETKQRILPSWNILSIGGTSGW*RPTWAS
Trigger: CGAGGCCCAGGTGGGCCGTCACCAGCCAGAGGTCCC...CCCAATAGACAGAATGTTCCATGATGGCAGAATTCTCTGTTTTGTTTCCTTCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp ACACTGGCAGCCGGAAGGCAGCCAGACACATACTTATTGGTCGTATaGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTGGGGACAT +
Preference number: 2 (lower is better)
Translates to: TLAAGRQPDTYLLVV*LRRCVRHCSRCWGH
Trigger: ATGTCCCCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTCCGGCTGCCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CCA 90 bp TTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAAATACACCTGCCAGGCAATTaGCTGACTGCCTCCGTGATC +
Preference number: 2 (lower is better)
Translates to: FVWMVSAHPAHSAATLKIHLPGN*LTASVI
Trigger: GATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTG...TATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp ATAGGCAAGGGTATGCCCTTTTTACCTTCTGATTCTGAACTCCTTCCTGGGCAGACGTGGAACAGCTGCTaGCCTCAAGGAAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: IGKGMPFLPSDSELLPGQTWNSC*PQGRTA
Trigger: GGCAGTTCTTCCTTGAGGTCAGCAGCTGTTCCACGT...CTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGCATACCCTTGCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCCAGAAGTTCCCACTCTaGGTGGTGGGTTTCATCCAG +
Preference number: 2 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGQKFPL*VVGFIQ
Trigger: CTGGATGAAACCCACCACGCAGAGTGGGAACTTCTG...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp GCACTAAGTCTTAGGTTCCTTGTCACTGAACAGCCTTCTTTCCACTaGGCTTCTCTTGGCCAGCATCCTGGCACACCATCAGAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: ALSLRFLVTEQPSFH*ASLGQHPGTPSEEK
Trigger: TTTCTCCTCTGATGGTGTGCCAGGATGCTGGCCAAGAGAAGCCAAGTGGAAAGAAGGCTGTTCAGTGACAAGGAACCTAAGACTTAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGCCCACTGCTGGTAACTaGGCCACAGAAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLPTAGN*ATETVS
Trigger: GCTTACAGTTTCTGTGGCTCAGTTACCAGCAGTGGG...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp TACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTGGTTTTCTCGGTCACTTTaGAAGCCAGGGACCTCTGGC +
Preference number: 2 (lower is better)
Translates to: YLLVVLLRRCVRHCSRCWFSRSL*KPGTSG
Trigger: GCCAGAGGTCCCTGGCTTGCAAAGTGACCGAGAAAA...CCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp TCACACCTCCTGAAACATGTGCACACTAAGAGAACTGGAGAATGTTaGCTCAGTTTCCCTCCTTTTCAGGGGAACCCTCTGGCTGGTCTT +
Preference number: 2 (lower is better)
Translates to: SHLLKHVHTKRTGEC*LSFPPFQGNPLAGL
Trigger: AAGACCAGCCAGAGGGTTCCCCTGAAAAGGAGGGAAACTGAGCAAACATTCTCCAGTTCTCTTAGTGTGCACATGTTTCAGGAGGTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTCTGGAGACACCCCAGTaGGCAAGCCAGATAGAAAAG +
Preference number: 2 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFLETPQ*ASQIEK
Trigger: CTTTTCTATCTGGCTTGCTCACTGGGGTGTCTCCAG...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp GACACTCAAGTAAAGGCTGGAAAGAGGGCAGAGGGAGGCACTTCACATGGTTACAGACAGATAAGCCCCTaGATGATGCTGAAAGTCAGA +
Preference number: 2 (lower is better)
Translates to: DTQVKAGKRAEGGTSHGYRQISP*MMLKVR
Trigger: TCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCT...GTAACCATGTGAAGTGCCTCCCTCTGCCCTCTTTCCAGCCTTTACTTGAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp AGGATAGCTATGTGGGGTAAAAAGCACCTGAGATCTCACCATGCAGAGGTAACAGTTTCCTCCCCATTCTaGTCTGCGAACAACGCACAG +
Preference number: 2 (lower is better)
Translates to: RIAMWGKKHLRSHHAEVTVSSPF*SANNAQ
Trigger: CTGTGCGTTGTTCGCAGAGCAGAATGGGGAGGAAAC...TGTTACCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCCACATAGCTATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CCA 90 bp GACACTCAAGTAAAGGCTGGAAAGAGGGCAGAGGGAGGCACTTCACATGGTTACACAATTGGGAAAGGGTaGGCAAACAGGAACAGAAGT +
Preference number: 2 (lower is better)
Translates to: DTQVKAGKRAEGGTSHGYTIGKG*ANRNRS
Trigger: ACTTCTGTTCCTGTTTGCCCACCCTTTCCCAATTGT...GTAACCATGTGAAGTGCCTCCCTCTGCCCTCTTTCCAGCCTTTACTTGAGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp CAGGGAGGGTTTTCTTGTTGTGTCATGGCTGAGATCAAAGTCATTGTACACCAAGTCAGAGCCTGGGGGTaGATGCCACCTTATCTTTGT +
Preference number: 2 (lower is better)
Translates to: QGGFSCCVMAEIKVIVHQVRAWG*MPPYLC
Trigger: ACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGAC...TTGGTGTACAATGACTTTGATCTCAGCCATGACACAACAAGAAAACCCTCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTACCTCAAGGAAGAACTaGCCAGGACATCATTCCAGG +
Preference number: 2 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFTSRKN*PGHHSR
Trigger: CCTGGAATGATGTCCTGGGCAGTTCTTCCTTGAGGT...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CCA 90 bp TTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAAATACACATAGTCACGCTGTaGATCCCTGTTTATTCCCAT +
Preference number: 2 (lower is better)
Translates to: FVWMVSAHPAHSAATLKIHIVTL*IPVYSH
Trigger: ATGGGAATAAACAGGGATCCACAGCGTGACTATGTG...TATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp GTGAAATCTGAGATGTCCATTAGAGACCTAAGTGGAGATGTCAGTAGCAAACTGCCTGACGTATCGAGCTaGAGCGGACTTCTGCGTATA +
Preference number: 2 (lower is better)
Translates to: VKSEMSIRDLSGDVSSKLPDVSS*SGLLRI
Trigger: TATACGCAGAAGTCCGCTGCAGCTCGATACGTCAGG...CAGTTTGCTACTGACATCTCCACTTAGGTCTCTAATGGACATCTCAGATTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp CTTAGAGTTCTGATGTTGCTTAGAAGACAGAGGCCTACCTCATTCTaGGTTTACTCATGCTTCAGGTTACATGAATGTGGGGTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LRVLMLLRRQRPTSF*VYSCFRLHECGVGS
Trigger: ACTCCCCACCCCACATTCATGTAACCTGAAGCATGAGTAAACCAAGAATGAGGTAGGCCTCTGTCTTCTAAGCAACATCAGAACTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCAGCCAACAACATTTATaGCAAATCCCATTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGSQQHL*QIPFPR
Trigger: TCTTGGGAATGGGATTTGGCATAAATGTTGTTGGCT...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp AACAGGGAGGGTTTTCTTGTTGTGTCATGGCTGAGATCAAAGTCATaGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACAACATTT +
Preference number: 2 (lower is better)
Translates to: NREGFLVVSWLRSKS*YTKDIVDRREPTTF
Trigger: AAATGTTGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAGCCATGACACAACAAGAAAACCCTCCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp CCAGAGAGTTTTCTAAGAGTCCCTCATGTTCTTAGAGTTCTGATGTaGCTTAGAAGACAGAGGCCTACCTCATTCTTGGTTTACTCATGC +
Preference number: 2 (lower is better)
Translates to: PESFLRVPHVLRVLM*LRRQRPTSFLVYSC
Trigger: GCATGAGTAAACCAAGAATGAGGTAGGCCTCTGTCTTCTAAGCAACATCAGAACTCTAAGAACATGAGGGACTCTTAGAAAACTCTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp GATGTTTCCATCATGGAAAATTACAAGTTTACTTGGTTTCAGTCCTaGGCACTAAGTCTTAGGTTCCTTGTCACTGAACAGCCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: DVSIMENYKFTWFQS*ALSLRFLVTEQPSF
Trigger: GAAAGAAGGCTGTTCAGTGACAAGGAACCTAAGACTTAGTGCCAAGGACTGAAACCAAGTAAACTTGTAATTTTCCATGATGGAAACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR TCA 90 bp AACATGTGCATCCCTTTGGTGAGAATTTCTAGTAATCTGTCTGATGTGTATAATAGGCTGATCTTTGCTTaGACGTGGGGTTTCATTTGG +
Preference number: 2 (lower is better)
Translates to: NMCIPLVRISSNLSDVYNRLIFA*TWGFIW
Trigger: CCAAATGAAACCCCACGTTCAAGCAAAGATCAGCCT...ATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR GCA 90 bp AACATGTGCATCCCTTTGGTGAGAATTTCTAGTAATCTGTCTGATGTGTATAATGCCCCACTAATCAGATaGATTCAACGTGGAACAGCT +
Preference number: 2 (lower is better)
Translates to: NMCIPLVRISSNLSDVYNAPLIR*IQRGTA
Trigger: AGCTGTTCCACGTTGAATGCATCTGATTAGTGGGGC...ATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp CAAATCTTTCTCCACACTTTATTTTTGCTGGCTGGATTTGTCATTTaGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: QIFLHTLFLLAGFVI*LSEQAYNIPQMFFL
Trigger: AAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGACAAATCCAGCCAGCAAAAATAAAGTGTGGAGAAAGATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 90 bp AAAGCACCTGAGATCTCACCATGCAGAGGTAACATGTGCATCCCTTaGGTGAGAATTTCTAGTAATCTGTCTGATGTGTATAATTATTCA +
Preference number: 2 (lower is better)
Translates to: KAPEISPCRGNMCIP*VRISSNLSDVYNYS
Trigger: TGAATAATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTTACCTCTGCATGGTGAGATCTCAGGTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CCA 90 bp TGGAAGGAAACAAAACAGAGAATTCTGCCATCATGGAACATTCTGTCTATTGGGAAAGAAAGAAGCCAATaGATTTGGTTTGAGCAACTG +
Preference number: 2 (lower is better)
Translates to: WKETKQRILPSWNILSIGKERSQ*IWFEQL
Trigger: CAGTTGCTCAAACCAAATCCATTGGCTTCTTTCTTT...CCCAATAGACAGAATGTTCCATGATGGCAGAATTCTCTGTTTTGTTTCCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CCA 90 bp AACATGTGCATCCCTTTGGTGAGAATTTCTAGTAATCTGTCTGATGTGTATAATGAACATTCTGTCTATTaGGGGAAAATAATAAACAGG +
Preference number: 2 (lower is better)
Translates to: NMCIPLVRISSNLSDVYNEHSVY*GKIINR
Trigger: CCTGTTTATTATTTTCCCCCAATAGACAGAATGTTC...ATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp GACCTCTGGCTGGTGACGGCCCACCTGGGCCTCGCTTaGCCATGCTACCTGCTGCAGGAGACGGCCCGCCCA +
Preference number: 3 (lower is better)
Translates to: DLWLVTAHLGLA*PCYLLQETARP
Trigger: TGGGCGGGCCGTCTCCTGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTGGGCCGTCACCAGCCAGAGGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp GCCGTGCTGACCTCTGTGCAGCCTCAGGCTCCTACCTaGGGCAAGACCGAAGGCTGTAGGAGAGTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: AVLTSVQPQAPT*GKTEGCRRVGA
Trigger: TGCTCCCACTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGGTCAGCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp GCGAGGGAGCTGGGGCATTTACAGCCAAGGTGCTGTTaGCTGAGGCTGCTCCCTGGGGGTGTGACTTCTGAG +
Preference number: 3 (lower is better)
Translates to: ARELGHLQPRCC*LRLLPGGVTSE
Trigger: CTCAGAAGTCACACCCCCAGGGAGCAGCCTCAGCCAACAGCACCTTGGCTGTAAATGCCCCAGCTCCCTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp GGGAGCATTAACAGGGTGGCAACAGCTGCTGTGCTGTaGACAGCCCAAGAGGGGCCAGGGCGGAAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: GSINRVATAAVL*TAQEGPGRKQR
Trigger: TCTCTGCTTCCGCCCTGGCCCCTCTTGGGCTGTTCACAGCACAGCAGCTGTTGCCACCCTGTTAATGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp GAGGCTGGTGGTTATCAGGTTAGCTGCTCCTGTGGGTaGCTGGGTGGTGCTCAGTCCCACGGAGGAACTGTG +
Preference number: 3 (lower is better)
Translates to: EAGGYQVSCSCG*LGGAQSHGGTV
Trigger: CACAGTTCCTCCGTGGGACTGAGCACCACCCAGCCACCCACAGGAGCAGCTAACCTGATAACCACCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CAA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTCCACCTGCCAGGCAATaGGCTGACTGCCTCCGTGAT +
Preference number: 3 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTPPARQ*ADCLRD
Trigger: ATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTGG...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp CTGGTGGTTATCAGGTTAGCTGCTCCTGTGGGTGGCTaGGTGGTGCTCAGTCCCACGGAGGAACTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: LVVIRLAAPVGG*VVLSPTEELWK
Trigger: TTTCCACAGTTCCTCCGTGGGACTGAGCACCACCCAGCCACCCACAGGAGCAGCTAACCTGATAACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp GAAAGGGAGTTCTGGGAAGGGGGACAGGAGATGGGTTaGAAACAGCGAAAGAGGAATGAGGGCAGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: EREFWEGGQEMG*KQRKRNEGRPH
Trigger: GTGAGGCCTGCCCTCATTCCTCTTTCGCTGTTTGCAACCCATCTCCTGTCCCCCTTCCCAGAACTCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp CCCTTCAGGATGGTCCTGCTTTTCCCCCAGCACCTGTaGAGGCATCTCTGGCGAGCCTTATCACAGTCTTTC +
Preference number: 3 (lower is better)
Translates to: PFRMVLLFPQHL*RHLWRALSQSF
Trigger: GAAAGACTGTGATAAGGCTCGCCAGAGATGCCTGCACAGGTGCTGGGGGAAAAGCAGGACCATCCTGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp TCACCTGTCTGGGCACATACCGAGTCTTTGTCTGGATaGTGTCAGCACATCCTGCACACTCAGCGGCAACCC +
Preference number: 3 (lower is better)
Translates to: SPVWAHTESLSG*CQHILHTQRQP
Trigger: GGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp GGTGGCTGGGTGGTGCTCAGTCCCACGGAGGAACTGTaGAAAAGAGTATGGAACGTGTGCCTCAGCAATGCT +
Preference number: 3 (lower is better)
Translates to: GGWVVLSPTEEL*KRVWNVCLSNA
Trigger: AGCATTGCTGAGGCACACGTTCCATACTCTTTTCCACAGTTCCTCCGTGGGACTGAGCACCACCCAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp TCCATCACCTGTCTGGGCACATACCGAGTCTTTGTCTaGATGGTGTCAGCACATCCTGCACACTCAGCGGCA +
Preference number: 3 (lower is better)
Translates to: SITCLGTYRVFV*MVSAHPAHSAA
Trigger: TGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp GAAAGAGGGCAGAGGGAGGCACTTCACATGGTTACCTaGGAAGAGGAAATAGCAGGAGCACCAGCCCTAAGG +
Preference number: 3 (lower is better)
Translates to: ERGQREALHMVT*EEEIAGAPALR
Trigger: CCTTAGGGCTGGTGCTCCTGCTATTTCCTCTTCCCAGGTAACCATGTGAAGTGCCTCCCTCTGCCCTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp AAAGAGTATGGAACGTGTGCCTCAGCAATGCTTACCTaGGGGCGAGGGAGCTGGGGCATTTACAGCCAAGGT +
Preference number: 3 (lower is better)
Translates to: KEYGTCASAMLT*GRGSWGIYSQG
Trigger: ACCTTGGCTGTAAATGCCCCAGCTCCCTCGCCCTCAGGTAAGCATTGCTGAGGCACACGTTCCATACTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp GAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTaGGTGGTGGGTTTCATCCAGGACCAGCAATCTGGT +
Preference number: 3 (lower is better)
Translates to: ERVGKQEQKFPL*VVGFIQDQQSG
Trigger: ACCAGATTGCTGGTCCTGGATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CAA 90 bp TTTCCTCCCCATTCTGCTCTGCGAACAACGCACAGTCCAGCCAGGAGCTCAACAAATGCCACCTTATCTTaGTCCTCCTCAGCTGGTCTG +
Preference number: 3 (lower is better)
Translates to: FPPHSALRTTHSPARSSTNATLS*SSSAGL
Trigger: CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATT...TGTTGAGCTCCTGGCTGGACTGTGCGTTGTTCGCAGAGCAGAATGGGGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CAA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCAGGGACAGGAGATGGGTaGCAAACAGCGAAAGAGGAA +
Preference number: 3 (lower is better)
Translates to: RNASGRSACGKGERGSKAGTGDG*QTAKEE
Trigger: TTCCTCTTTCGCTGTTTGCAACCCATCTCCTGTCCC...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp AGTCCTCAGGGAGGCAGAGCACTGAACAAAGGAACCTaGGAAGGAGCAACCAGAGAGCTTGGTGTCCTGAAA +
Preference number: 3 (lower is better)
Translates to: SPQGGRALNKGT*EGATRELGVLK
Trigger: TTTCAGGACACCAAGCTCTCTGGTTGCTCCTTCTCAGGTTCCTTTGTTCAGTGCTCTGCCTCCCTGAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp ACTGTGGAAAAGAGTATGGAACGTGTGCCTCAGCAATaGTTACCTGAGGGCGAGGGAGCTGGGGCATTTACA +
Preference number: 3 (lower is better)
Translates to: TVEKSMERVPQQ*LPEGEGAGAFT
Trigger: TGTAAATGCCCCAGCTCCCTCGCCCTCAGGTAAGCATTGCTGAGGCACACGTTCCATACTCTTTTCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp AACCCTGAAAATAACATCTACCACCTGCCAGGCAATTaGCTGACTGCCTCCGTGATCTTCAGGGGCATCGAG +
Preference number: 3 (lower is better)
Translates to: NPENNIYHLPGN*LTASVIFRGIE
Trigger: CTCGATGCCCCTGAAGATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTGGTAGATGTTATTTTCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CAA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCGCACATACCGAGTCTTaGTCTGGATGGTGTCAGCAC +
Preference number: 3 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGAHTES*SGWCQH
Trigger: GTGCTGACACCATCCAGACAAAGACTCGGTATGTGC...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp CCGGAAGGCAGCCAGACACATACTTATTGGTCGTATTaGTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCT +
Preference number: 3 (lower is better)
Translates to: PEGSQTHTYWSY*LGDASGTVLGA
Trigger: AGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTCCGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp CCCACTAATCAGATGCATTCAACGTGGAACAGCTGCTaGCCTCAAGGAAGAACTGCCCAGGACATCATTCCA +
Preference number: 3 (lower is better)
Translates to: PTNQMHSTWNSC*PQGRTAQDIIP
Trigger: TGGAATGATGTCCTGGGCAGTTCTTCCTTGAGGTCAGCAGCTGTTCCACGTTGAATGCATCTGATTAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp TCTACTGGTTCTAGCTCTCAGCCTGACGTATCGAGCTaGAGCGGACTTCTGCGTATAAAGACTGTCCTGTTT +
Preference number: 3 (lower is better)
Translates to: STGSSSQPDVSS*SGLLRIKTVLF
Trigger: AAACAGGACAGTCTTTATACGCAGAAGTCCGCTGCAGCTCGATACGTCAGGCTGAGAGCTAGAACCAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp CTGGGCCAAGTATGGCTTCCACACTGGTTGAGTTCTTaGCCAGCACCAAAGAAGAATGAGAATGTGCTGACA +
Preference number: 3 (lower is better)
Translates to: LGQVWLPHWLSS*PAPKKNENVLT
Trigger: TGTCAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAGCCATACTTGGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp GTCATTCTGAGCAAAAGCATGACTCCATCACCTGTCTaGGCACATACCGAGTCTTTGTCTGGATGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: VILSKSMTPSPV*AHTESLSGWCQ
Trigger: CTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGTCATGCTTTTGCTCAGAATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CAA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTCTCCACACTTTATTTTaGCTGGCTGGATTTGTCATT +
Preference number: 3 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTLHTLF*LAGFVI
Trigger: AATGACAAATCCAGCCAGCAAAAATAAAGTGTGGAG...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp ATACCGAGTCTTTGTCTGGATGGTGTCAGCACATCCTaGACACTCAGCGGCAACCCTGAAAATAACATCTAC +
Preference number: 3 (lower is better)
Translates to: IPSLCLDGVSTS*TLSGNPENNIY
Trigger: GTAGATGTTATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp ACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATaGGAATGTGCTGACAGTGGAAGAGTGAGCAAAGCT +
Preference number: 3 (lower is better)
Translates to: TLVEFLPSTKEE*ECADSGRVSKA
Trigger: AGCTTTGCTCACTCTTCCACTGTCAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp ATTTGGTTTGAGCAACTGGATGGAGCTACCTCTTCCTaGATCAGGGACATTTTCCAAAGGAGTGGCACAGGA +
Preference number: 3 (lower is better)
Translates to: IWFEQLDGATSS*IRDIFQRSGTG
Trigger: TCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTCCATCCAGTTGCTCAAACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp CATAGTGTTAGTTTGTGTTCATCCAGGAGCCAATCCTaGGACAGAGACCGGAAAGCAAGAAATGCATCTGGG +
Preference number: 3 (lower is better)
Translates to: HSVSLCSSRSQS*DRDRKARNASG
Trigger: CCCAGATGCATTTCTTGCTTTCCGGTCTCTGTCTCAGGATTGGCTCCTGGATGAACACAAACTAACACTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp AGTGGAGATGTCAGTAGCAAACTGAATATAGGGGTCTaGAGTTCAGGGAAGAGGCCCATTCTGGGTTTAAAC +
Preference number: 3 (lower is better)
Translates to: SGDVSSKLNIGV*SSGKRPILGLN
Trigger: GTTTAAACCCAGAATGGGCCTCTTCCCTGAACTGCAGACCCCTATATTCAGTTTGCTACTGACATCTCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp TTAAGGCGTTATTCAGAAAGAACAATTGGGAAAGGGTaGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGG +
Preference number: 3 (lower is better)
Translates to: LRRYSERTIGKG*ANRNRSSHSAW
Trigger: CCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCCCAATTGTTCTTTCTGAATAACGCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp GTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTaGCAGTGGAAGAGTGAGCAAAGCTGGGAGTTTTAT +
Preference number: 3 (lower is better)
Translates to: VLAQHQRRMRMC*QWKSEQSWEFY
Trigger: ATAAAACTCCCAGCTTTGCTCACTCTTCCACTGTCAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp AGCACTATTTGTCTTCTTGCCTACACAAGCTACATGTaGGGTTCACACCTCCTGAAACATGTGCACACTAAG +
Preference number: 3 (lower is better)
Translates to: STICLLAYTSYM*GSHLLKHVHTK
Trigger: CTTAGTGTGCACATGTTTCAGGAGGTGTGAACCCCACATGTAGCTTGTGTAGGCAAGAAGACAAATAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR-3UTR CAA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGCTGCATAGTATTTCATaGTGCCCAAGAACCGTAATT +
Preference number: 3 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLLHSIS*CPRTVI
Trigger: AATTACGGTTCTTGGGCACAATGAAATACTATGCAG...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp TGCAGTTCAGGGAAGAGGCCCATTCTGGGTTTAAACTaGGGTGTTAGACAGCATGTAGATGGTATAATCCAT +
Preference number: 3 (lower is better)
Translates to: CSSGKRPILGLN*GVRQHVDGIIH
Trigger: ATGGATTATACCATCTACATGCTGTCTAACACCTCAGTTTAAACCCAGAATGGGCCTCTTCCCTGAACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp GGTATGATAGAAAGAAAGAAGCCAATGGATTTGGTTTaGGCAACTGGATGGAGCTACCTCTTCCTGAATCAG +
Preference number: 3 (lower is better)
Translates to: GMIERKKPMDLV*ATGWSYLFLNQ
Trigger: CTGATTCAGGAAGAGGTAGCTCCATCCAGTTGCTCAAACCAAATCCATTGGCTTCTTTCTTTCTATCATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp TGCAGGCATCTCTGGCGAGCCTTATCACAGTCTTTCTaGGTTTGCCTGTATGCTTCACATAAATGTAGTAAA +
Preference number: 3 (lower is better)
Translates to: CRHLWRALSQSF*VCLYASHKCSK
Trigger: TTTACTACATTTATGTGAAGCATACAGGCAAACTCAGAAAGACTGTGATAAGGCTCGCCAGAGATGCCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp TCTATCTACTTCCCACTAAATCTACTAGGGACAGTGTaGCATGGCAACACTGTCTGTCTGCTTTCATCATTT +
Preference number: 3 (lower is better)
Translates to: SIYFPLNLLGTV*HGNTVCLLSSF
Trigger: AAATGATGAAAGCAGACAGACAGTGTTGCCATGGCACACTGTCCCTAGTAGATTTAGTGGGAAGTAGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR GCA 72 bp AAAGCACCTGAGATCTCACCATGCAGAGGTAACATGTaGATCCCTTTGGTGAGAATTTCTAGTAATCTGTCT +
Preference number: 3 (lower is better)
Translates to: KAPEISPCRGNM*IPLVRISSNLS
Trigger: AGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTTACCTCTGCATGGTGAGATCTCAGGTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp ATTCGATTGGTTAAGGCGTTATTCAGAAAGAACAATTaGGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCA +
Preference number: 3 (lower is better)
Translates to: IRLVKALFRKNN*ERVGKQEQKFP
Trigger: TGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCCCAATTGTTCTTTCTGAATAACGCCTTAACCAATCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp AGAAAGAAAGAAGCCAATGGATTTGGTTTGAGCAACTaGATGGAGCTACCTCTTCCTGAATCAGGGACATTT +
Preference number: 3 (lower is better)
Translates to: RKKEANGFGLSN*MELPLPESGTF
Trigger: AAATGTCCCTGATTCAGGAAGAGGTAGCTCCATCCAGTTGCTCAAACCAAATCCATTGGCTTCTTTCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR TCA 72 bp ATTCTTGTCCAGCGCCCAAGAAGAATGAGAATGTACTaGCAGTGGAAGAGTGAGCACTTGCTAATTATAAAA +
Preference number: 3 (lower is better)
Translates to: ILVQRPRRMRMY*QWKSEHLLIIK
Trigger: TTTTATAATTAGCAAGTGCTCACTCTTCCACTGTCAGTACATTCTCATTCTTCTTGGGCGCTGGACAAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CCA 72 bp ACAGAGAATTCTGCCATCATGGAACATTCTGTCTATTaGGGGAAAATAATAAACAGGGCAAGTAAGAAACCA +
Preference number: 3 (lower is better)
Translates to: TENSAIMEHSVY*GKIINRASKKP
Trigger: TGGTTTCTTACTTGCCCTGTTTATTATTTTCCCCCAATAGACAGAATGTTCCATGATGGCAGAATTCTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp GGACCTCTGGCTGGTGACGGCCCACCTGGGCCTCGCTaGACCATGCTACCTGCTGCAGGAGACGGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: GPLAGDGPPGPR*TMLPAAGDGPP
Trigger: GGGCGGGCCGTCTCCTGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTGGGCCGTCACCAGCCAGAGGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGGCCCCTCCCGCCGCCTaGAGCTCCAGGAGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLAPPAA*SSRSPE
Trigger: CTCAGGGCTCCTGGAGCTGCAGGCGGCGGGAGGGGC...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GACACTCAAGTAAAGGCTGGAAAGAGGGCAGAGGGAGGCACTTCACATGGTTACGGGACCTCTGGCTGGTaGCGGCCCACCTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: DTQVKAGKRAEGGTSHGYGTSGW*RPTWAS
Trigger: CGAGGCCCAGGTGGGCCGTCACCAGCCAGAGGTCCC...GTAACCATGTGAAGTGCCTCCCTCTGCCCTCTTTCCAGCCTTTACTTGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCTGGGTGGCTGGGTGGTaGTCAGTCCCACGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVWVAGW*SVPRRN
Trigger: GTTCCTCCGTGGGACTGAGCACCACCCAGCCACCCA...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCCACTCAGCAAACTCGTaGGACTGGGGAGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCHSANS*DWGGPG
Trigger: CCCTGGACCTCCCCAGTCTCACGAGTTTGCTGAGTG...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCACCTGGGCCTCGCTTaGCCATGCTACCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLHLGLA*PCYLLQ
Trigger: CTGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTG...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCCGGCTGGATCCAGGCTaGATCAAGAGGCAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCRLDPG*IKRQGC
Trigger: ACAGCCCTGCCTCTTGATGCAGCCTGGATCCAGCCG...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCATCAGGCCCGGGCGGATaGTCAGGCGAGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSSGPGG*SGEHRP
Trigger: TGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGA...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp GAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTTTCCCCCAGCACCTGTaGAGGCATCTCTGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ESQSLGVNATLSLSSSAGFPQHL*RHLWRA
Trigger: GGCTCGCCAGAGATGCCTGCACAGGTGCTGGGGGAA...ACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCAGGAGCCCTGAGACCTaGCCCTTCCGGCGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGRSPET*PFRRSE
Trigger: CTCCGAGCGCCGGAAGGGCCAGGTCTCAGGGCTCCT...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATCAGCCAAGGTGCTGTTaGCTGAGGCTGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHQPRCC*LRLLPG
Trigger: CCCAGGGAGCAGCCTCAGCCAACAGCACCTTGGCTG...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCGCTCCTGTGGGTGGCTaGGTGGTGCTCAGTCCCACG +
Preference number: 4 (lower is better)
Translates to: LHDAESQSLGVNATLSLSAPVGG*VVLSPT
Trigger: CGTGGGACTGAGCACCACCCAGCCACCCACAGGAGC...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGTGCGGATACTGCCTCTaGCTCGGATCGTGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLCGYCL*LGSCPR
Trigger: TCGGGGACACGATCCGAGTCAGAGGCAGTATCCGCA...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGACAGCTGCTGTGCTGTaGACAGCCCAAGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTASRQISPCMMLKVRAWTAAVL*TAQEGP
Trigger: TGGCCCCTCTTGGGCTGTTCACAGCACAGCAGCTGT...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGTCAGGCCCGGGCGGATaGTCAGGCGAGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLSGPGG*SGEHRP
Trigger: TGGCCTGTGCTCGCCTGAGCATCCGCCCGGGCCTGA...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCAGGCAATTGGCTGACTaGCTCCGTGATCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVRQLAD*LRDLQG
Trigger: CCCCTGAAGATCACGGAGGCAGTCAGCCAATTGCCT...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCCAAGCCAGGGACCTCTaGCTGGTGACGGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGQARDL*LVTAHL
Trigger: CAGGTGGGCCGTCACCAGCCAGAGGTCCCTGGCTTG...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCAGAAAGAGGCAGACACTaGCAGCCGGAAGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RNASGRSACGKGERGSKAERGRH*QPEGSQ
Trigger: CTGGCTGCCTTCCGGCTGCCAGTGTCTGCCTCTTTC...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCAGGGATGGGGAGCACTaGTGGCTTACCATATGGGCA +
Preference number: 4 (lower is better)
Translates to: PGGECHLIFVLLSWSACLRDGEH*WLTIWA
Trigger: TGCCCATATGGTAAGCCACCAGTGCTCCCCATCCCT...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTCAGCCCTTCTCCATGTaGTTTGGTTTCTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRQPFSM*FGFWQS
Trigger: GGACTGCCAGAAACCAAATCACATGGAGAAGGGCTG...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCCCAGGGCGCCTGGATTaGTTAGTGCCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCPGRLD*LVPLLS
Trigger: AGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGG...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGAGCTCCAGAACTTGCTaGAGCACAGCCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VTASRQISPCMMLKVRAWSSRTC*STASLR
Trigger: CCTGAGCGAGGCTGTGCTGCAGCAAGTTCTGGAGCT...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp CCTCTGTGCAGCCTCAGGCTCCTACCTGGGGCAAGACCGAAGGCTGTAGGAGAGAGACAGATAAGCCCCTaGATGATGCTGAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PLCSLRLLPGARPKAVGERQISP*MMLKVR
Trigger: TCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCT...CTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCAGGTGTCAGCACATCCTaGACACTCAGCGGCAACCCT +
Preference number: 4 (lower is better)
Translates to: RNASGRSACGKGERGSKAGVSTS*TLSGNP
Trigger: AGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACC...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCCCCACTTCACCCGCCTaGGCCAAGTATGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LHDAESQSLGVNATLSLSPTSPA*AKYGFH
Trigger: GTGGAAGCCATACTTGGCCCAGGCGGGTGAAGTGGG...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTGGCTGTGGGTGGCTGGGTaGTGCTCAGTCCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: YLLVVLLRRCVRHCSRCWLWVAG*CSVPRR
Trigger: CCTCCGTGGGACTGAGCACCACCCAGCCACCCACAG...CCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCCCACTGCTGGTAACTaGGCCACAGAAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLPTAGN*ATETVS
Trigger: GCTTACAGTTTCTGTGGCTCAGTTACCAGCAGTGGG...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTGGGGGTGTGACTTCTaGGCACTTCCAGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: HDAESQSLGVNATLSLSSWGCDF*ALPACT
Trigger: TGTGCAGGCTGGAAGTGCTCAGAAGTCACACCCCCA...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACACAAGGTGCTGTTGGCTaGGGCTGCTCCCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTQGAVG*GCSLGV
Trigger: CACCCCCAGGGAGCAGCCTCAGCCAACAGCACCTTG...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAAGCTCCAGAACTTGCTaGAGCACAGCCTCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSSSRTC*STASLR
Trigger: CCTGAGCGAGGCTGTGCTGCAGCAAGTTCTGGAGCT...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTTGGTCTGCGTGTCTCTaGTCAGAACGCTGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRWSACL*SERCVV
Trigger: TACTACACAGCGTTCTGAGCAGAGACACGCAGACCA...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTCCTGTGGTGTCCCTTTaGCATGGAAGAGACTCCAAC +
Preference number: 4 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTPVVSL*HGRDSN
Trigger: GTTGGAGTCTCTTCCATGGCAAAGGGACACCACAGG...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCCAGGGTGGCAACAGCTaGTGTGCTGTGAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LHDAESQSLGVNATLSLSQGGNS*CAVNSP
Trigger: TGGGCTGTTCACAGCACAGCAGCTGTTGCCACCCTG...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CGAGTCTTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGGTACAAAAATACACCTaGCACCTGGCGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: RVFVWMVSAHPAHSAATLVQKYT*HLAGLL
Trigger: AAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTAC...CAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCGTACAAAAATACACCTaGCACCTGGCGGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: PGGECHLIFVLLSWSACLVQKYT*HLAGLL
Trigger: AAGGAGTCCCGCCAGGTGCCAGGTGTATTTTTGTAC...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGCAGTGACCCAGCTGTaGTTAGCTCCAGAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRAVTQL*LAPESF
Trigger: AAAACTCTCTGGAGCTAACCACAGCTGGGTCACTGC...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp CTTCAGGCTGATCTTTGCTTGAACGTGGGGTTTCATTaGGGACCCTCCCCTCTCTGCCTAGGCATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQADLCLNVGFH*GPSPLCLGIWL
Trigger: CAGCCAAATGCCTAGGCAGAGAGGGGAGGGTCCCAAATGAAACCCCACGTTCAAGCAAAGATCAGCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGCAGCCCTTCTCCATGTaGTTTGGTTTCTGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: VTASRQISPCMMLKVRAWQPFSM*FGFWQS
Trigger: GGACTGCCAGAAACCAAATCACATGGAGAAGGGCTG...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGTCAGAGCCTGGGGGTaGATGCCACCTTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSAVRAWG*MPPYLC
Trigger: ACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGAC...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGATGCCCCTCAGTTCCTaGATGTTCACTACCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLMPLSS*MFTTLW
Trigger: CCACAGGGTAGTGAACATTCAGGAACTGAGGGGCAT...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTCCAGGGCGCCTGGATTaGTTAGTGCCTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSAPGRLD*LVPLLS
Trigger: AGAAAGAAGAGGCACTAAGCAATCCAGGCGCCCTGG...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp CGAGTCTTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGGCCCCACTAATCAGATaGATTCAACGTGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: RVFVWMVSAHPAHSAATLAPLIR*IQRGTA
Trigger: AGCTGTTCCACGTTGAATGCATCTGATTAGTGGGGC...CAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATTTTTCTCGGTCACTTTaGAAGCCAGGGACCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHFSRSL*KPGTSG
Trigger: GCCAGAGGTCCCTGGCTTGCAAAGTGACCGAGAAAA...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCGGTTATCAGGTTAGCTaGTCCTGTGGGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HDAESQSLGVNATLSLSSGYQVS*SCGWLG
Trigger: ACCCAGCCACCCACAGGAGCAGCTAACCTGATAACC...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCCCTCTTCACACCGGCTaGATCCAGGCTGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: HDAESQSLGVNATLSLSSPLHTG*IQAASR
Trigger: TCTTGATGCAGCCTGGATCCAGCCGGTGTGAAGAGG...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCCTTCTCCATGTGATTTaGTTTCTGGCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCLLHVI*FLAVLL
Trigger: CAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTTTTGTCCTCCTCAGCTaGTCTGCGTGTCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSAFVLLS*SACLCS
Trigger: TGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAA...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTAGCAACCAGAGAGCTTaGTGTCCTGAAAGCCAAACG +
Preference number: 4 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTSNQRA*CPESQT
Trigger: CGTTTGGCTTTCAGGACACCAAGCTCTCTGGTTGCT...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GACACTCAAGTAAAGGCTGGAAAGAGGGCAGAGGGAGGCACTTCACATGGTTACTTTATGGGCTCAGAATaGGGGGAGGGGCAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: DTQVKAGKRAEGGTSHGYFMGSE*GEGQAV
Trigger: TACAGCCTGCCCCTCCCCCCATTCTGAGCCCATAAA...GTAACCATGTGAAGTGCCTCCCTCTGCCCTCTTTCCAGCCTTTACTTGAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTCACTGTTCTAGGTGCTaGGGACATGGAAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRHCSRC*GHGRKQ
Trigger: TTGTTTCCTTCCATGTCCCCAGCACCTAGAACAGTG...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTAAAGGATCTCCAGCTGAGCCACGAAGAGCTTATCACATCAAGAGCAAATGCAAGCTGCTCCTGTGGGTaGCTGGGTGGTGCTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LKDLQLSHEELITSRANASCSCG*LGGAQS
Trigger: GGACTGAGCACCACCCAGCCACCCACAGGAGCAGCT...TGCATTTGCTCTTGATGTGATAAGCTCTTCGTGGCTCAGCTGGAGATCCTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp ATGACTCCATCACCTGTCTGGGCACATACCGAGTCTTaGTCTGGATGGTGTCAGCACATCCTGCACACTCAG +
Preference number: 4 (lower is better)
Translates to: MTPSPVWAHTES*SGWCQHILHTQ
Trigger: CTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp GCCGGAAGGCAGCCAGACACATACTTATTGGTCGTATaGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGRQPDTYLLVV*LRRCVRHCSRC
Trigger: GCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTCCGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTTGTCCAGGATATCCCTaGTGTAGAGTTTTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRCPGYP*CRVLQR
Trigger: CCTTTGCAAAACTCTACATCAGGGATATCCTGGACA...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp CTAAAGGATCTCCAGCTGAGCCACGAAGAGCTTATCACATCAAGAGCAAATGCATGCGGATACTGCCTCTaGCTCGGATCGTGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LKDLQLSHEELITSRANACGYCL*LGSCPR
Trigger: TCGGGGACACGATCCGAGTCAGAGGCAGTATCCGCA...TGCATTTGCTCTTGATGTGATAAGCTCTTCGTGGCTCAGCTGGAGATCCTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGGCAGTCCTGCTGAATaGTCCGGTGGATCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSGSPAE*SGGSFC
Trigger: ACAGAAAGATCCACCGGATCATTCAGCAGGACTGCC...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCGTCAGAGCCTGGGGGTaGATGCCACCTTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: HDAESQSLGVNATLSLSSVRAWG*MPPYLC
Trigger: ACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGAC...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp ATAGGCAAGGGTATGCCCTTTTTACCTTCTGATTCTGAACTCCTTCCTGGGCAGGTAAGGCAGGGAGGGTaGGGCTGGTGGTTATCAGGT +
Preference number: 4 (lower is better)
Translates to: IGKGMPFLPSDSELLPGQVRQGG*GWWLSG
Trigger: ACCTGATAACCACCAGCCTCACCCTCCCTGCCTTAC...CTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGCATACCCTTGCCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCAGACAGATAAGCCCCTaGATGATGCTGAAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCRQISP*MMLKVR
Trigger: TCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCT...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR GCA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCACTCCCCATTCTGCTCTaGGAACAACGCACAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKALPILL*EQRTVQ
Trigger: CTGGACTGTGCGTTGTTCGCAGAGCAGAATGGGGAG...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCGTTTCCTCCCCATTCTaGTCTGCGAACAACGCACAG +
Preference number: 4 (lower is better)
Translates to: HDAESQSLGVNATLSLSSVSSPF*SANNAQ
Trigger: CTGTGCGTTGTTCGCAGAGCAGAATGGGGAGGAAAC...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGCTACTAGGGACAGTGTaGCATGGCAACACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VTASRQISPCMMLKVRAWLLGTV*HGNTVC
Trigger: ACAGACAGTGTTGCCATGGCACACTGTCCCTAGTAG...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTTATAATCCATGTGGCTaGTGGAGACACCCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSAYNPCG*WRHPSE
Trigger: CTCACTGGGGTGTCTCCAGCAGCCACATGGATTATA...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTGGACCCTCCCCTCTCTaGCTAGGCATTTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFGPSPL*LGIWLP
Trigger: AGGCAGCCAAATGCCTAGGCAGAGAGGGGAGGGTCC...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCCACTGGTTGAGTTCTTaGCCAGCACCAAAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVHWLSS*PAPKKN
Trigger: ATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTG...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCCAAGAGGCAGGGCTGTaGCTTCCAGCTAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: LHDAESQSLGVNATLSLSQEAGL*LPANSE
Trigger: TTCAGAGTTAGCTGGAAGCCACAGCCCTGCCTCTTG...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCTTCTCCATGTGATTTaGTTTCTGGCAGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLLLHVI*FLAVLL
Trigger: CAGCAGGACTGCCAGAAACCAAATCACATGGAGAAG...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGGTGTCCCTTTGCCATaGAAGAGACTCCAACCACAC +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSGVPLP*KRLQPH
Trigger: GTGTGGTTGGAGTCTCTTCCATGGCAAAGGGACACC...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTTGCAGGGAAATGTACTaGGACACCTTTCGATTCCCA +
Preference number: 4 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTCREMY*DTFRFP
Trigger: TGGGAATCGAAAGGTGTCCCAGTACATTTCCCTGCA...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTGGCACCTGCCAGGCAATTaGCTGACTGCCTCCGTGATC +
Preference number: 4 (lower is better)
Translates to: YLLVVLLRRCVRHCSRCWHLPGN*LTASVI
Trigger: GATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTG...CCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGAGTCTTTGTCTGGATaGTGTCAGCACATCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLESLSG*CQHILH
Trigger: GTGCAGGATGTGCTGACACCATCCAGACAAAGACTC...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCTTTGGTTTGAGCAACTaGATGGAGCTACCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVFGLSN*MELPLP
Trigger: AGGAAGAGGTAGCTCCATCCAGTTGCTCAAACCAAA...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTAAGGGGGACAGGAGATaGGTTGCAAACAGCGAAAGA +
Preference number: 4 (lower is better)
Translates to: ESQSLGVNATLSLSSSAGKGDRR*VANSER
Trigger: TCTTTCGCTGTTTGCAACCCATCTCCTGTCCCCCTT...ACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCGGCCTACCTCATTCTTaGTTTACTCATGCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCGLPHS*FTHASG
Trigger: ACCTGAAGCATGAGTAAACCAAGAATGAGGTAGGCC...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCAGGGGAACCCTCTGGCTaGTCTTCAGTACATGAGCAG +
Preference number: 4 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKAGEPSG*SSVHEQ
Trigger: CTGCTCATGTACTGAAGACCAGCCAGAGGGTTCCCC...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCAGTGTCTTACAGGGATaGGGAGCACTGGTGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LHDAESQSLGVNATLSLSSVLQG*GALVAY
Trigger: GTAAGCCACCAGTGCTCCCCATCCCTGTAAGACACT...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGAATGAGACGCTTCTTTaGGGCAACTGCTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLNETLL*GNCCRG
Trigger: GCCTCTACAGCAGTTGCCCCAAAGAAGCGTCTCATT...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTTCTGGCAGTCCTGCTaGATGATCCGGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LHDAESQSLGVNATLSLSFWQSC*MIRWIF
Trigger: AAAGATCCACCGGATCATTCAGCAGGACTGCCAGAA...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp TTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAAATAAGGGAGGCAGAGCACTaGACAAAGGAACCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FVWMVSAHPAHSAATLKIREAEH*TKEPEK
Trigger: CTTCTCAGGTTCCTTTGTTCAGTGCTCTGCCTCCCT...TATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCACCAATGGATTTGGTTTaGGCAACTGGATGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: RNASGRSACGKGERGSKAPMDLV*ATGWSY
Trigger: GTAGCTCCATCCAGTTGCTCAAACCAAATCCATTGG...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCGGGGTAAAAAGCACCTaGGATCTCACCATGCAGAGG +
Preference number: 4 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGGVKST*DLTMQR
Trigger: CCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCC...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTACACATCAGTTAAGCTaGCAACACTGTTTCCTCCCC +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSATHQLS*QHCFLP
Trigger: GGGGAGGAAACAGTGTTGGCAGCTTAACTGATGTGT...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCACCTGACGTATCGAGCTaGAGCGGACTTCTGCGTATA +
Preference number: 4 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKAPDVSS*SGLLRI
Trigger: TATACGCAGAAGTCCGCTGCAGCTCGATACGTCAGG...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGGACAGGAGATGGGTTaGAAACAGCGAAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLGQEMG*KQRKRN
Trigger: ATTCCTCTTTCGCTGTTTGCAACCCATCTCCTGTCC...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGGTATTGCTTAGGAGATaGGTCAGGCACTGTTCTAGG +
Preference number: 4 (lower is better)
Translates to: VTASRQISPCMMLKVRAWVLLRR*VRHCSR
Trigger: CCTAGAACAGTGCCTGACGCATCTCCTAAGCAATAC...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACACGTGTGCCTCAGCAATaGTTACCTGAGGGCGAGGGA +
Preference number: 4 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTRVPQQ*LPEGEG
Trigger: TCCCTCGCCCTCAGGTAAGCATTGCTGAGGCACACG...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCAGAGGTAACATGTaGATCCCTTTGGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: PGGECHLIFVLLSWSACLCRGNM*IPLVRI
Trigger: AATTCTCACCAAAGGGATGCACATGTTACCTCTGCA...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCGAACTGGAGAATGTTTaGTCAGTTTCCCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PGGECHLIFVLLSWSACLELENV*SVSLLF
Trigger: GAAAAGGAGGGAAACTGAGCAAACATTCTCCAGTTC...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCATTTGTCCTCCTCAGCTaGTCTGCGTGTCTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKAFVLLS*SACLCS
Trigger: TGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAA...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATTACCGAGTCTTTGTCTaGATGGTGTCAGCACATCCT +
Preference number: 4 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHYRVFV*MVSAHP
Trigger: AGGATGTGCTGACACCATCCAGACAAAGACTCGGTA...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTACAATTGGGAAAGGGTaGGCAAACAGGAACAGAAGT +
Preference number: 4 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTTIGKG*ANRNRS
Trigger: ACTTCTGTTCCTGTTTGCCCACCCTTTCCCAATTGT...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCACCCACGGAGGAACTGTaGAAAAGAGTATGGAACGTG +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSPTEEL*KRVWNV
Trigger: CACGTTCCATACTCTTTTCCACAGTTCCTCCGTGGG...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp CTTAGGTTCCTTGTCACTGAACAGCCTTCTTTCCACTaGGCTTCTCTTGGCCAGCATCCTGGCACACCATCA +
Preference number: 4 (lower is better)
Translates to: LRFLVTEQPSFH*ASLGQHPGTPS
Trigger: TGATGGTGTGCCAGGATGCTGGCCAAGAGAAGCCAAGTGGAAAGAAGGCTGTTCAGTGACAAGGAACCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp AGGATAGCTATGTGGGGTAAAAAGCACCTGAGATCTCACCATGCAGAGGTAACAACGTGGAACAGCTGCTaGCCTCAAGGAAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: RIAMWGKKHLRSHHAEVTTWNSC*PQGRTA
Trigger: GGCAGTTCTTCCTTGAGGTCAGCAGCTGTTCCACGT...TGTTACCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCCACATAGCTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGCTGGAGACACCCCAGTaGGCAAGCCAGATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLLETPQ*ASQIEK
Trigger: CTTTTCTATCTGGCTTGCTCACTGGGGTGTCTCCAG...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTGAGGGCAGGCCTCACTaGGAAGGTGACACTCAAGTA +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFEGRPH*EGDTQV
Trigger: TACTTGAGTGTCACCTTCTCAGTGAGGCCTGCCCTC...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACACTGGTCTTCAGTACATaGGCAGTGACCCAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTLVFST*AVTQLW
Trigger: CCACAGCTGGGTCACTGCTCATGTACTGAAGACCAG...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGACTTATGTGGGAGTTTaGGCTCACATTTACAGCCTC +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLTYVGV*AHIYSL
Trigger: GAGGCTGTAAATGTGAGCTCAAACTCCCACATAAGT...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAAAGGTTCTGCATCACTaGGTCAAGCATCTAGATGGG +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSKVLHH*VKHLDG
Trigger: CCCATCTAGATGCTTGACTCAGTGATGCAGAACCTT...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369764.1
CDS-3UTR GCA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCATGGTCTGCGTGTCTCTaGTCAGAACGCTGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKAWSACL*SERCVV
Trigger: TACTACACAGCGTTCTGAGCAGAGACACGCAGACCA...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCCACATCAAGAGCAAATaGAGCAGACGAAGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGHIKSK*SRRRQC
Trigger: GCACTGCCTTCGTCTGCTGCATTTGCTCTTGATGTG...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGCAAGAGGCAGGGCTGTaGCTTCCAGCTAACTCTGAA +
Preference number: 4 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLQEAGL*LPANSE
Trigger: TTCAGAGTTAGCTGGAAGCCACAGCCCTGCCTCTTG...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp AGGATAGCTATGTGGGGTAAAAAGCACCTGAGATCTCACCATGCAGAGGTAACACCTCTTCACACCGGCTaGATCCAGGCTGCATCAAGA +
Preference number: 4 (lower is better)
Translates to: RIAMWGKKHLRSHHAEVTPLHTG*IQAASR
Trigger: TCTTGATGCAGCCTGGATCCAGCCGGTGTGAAGAGG...TGTTACCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCCACATAGCTATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCACACATAGTCACGCTGTaGATCCCTGTTTATTCCCAT +
Preference number: 4 (lower is better)
Translates to: RNASGRSACGKGERGSKAHIVTL*IPVYSH
Trigger: ATGGGAATAAACAGGGATCCACAGCGTGACTATGTG...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAAATATCCAGGAGAAGGGAGTaGTCGACTGTGTGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: FVWMVSAHPAHSAATLKISRRRE*STVCVY
Trigger: ATACACACACACAGTCGACCACTCCCTTCTCCTGGA...TATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGAGAAGCCAATGGATTTaGTTTGAGCAACTGGATGGA +
Preference number: 4 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLRSQWI*FEQLDG
Trigger: TCCATCCAGTTGCTCAAACCAAATCCATTGGCTTCT...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp ATAGGCAAGGGTATGCCCTTTTTACCTTCTGATTCTGAACTCCTTCCTGGGCAGGGAGCATTAACAGGGTaGCAACAGCTGCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IGKGMPFLPSDSELLPGQGALTG*QQLLCC
Trigger: ACAGCACAGCAGCTGTTGCCACCCTGTTAATGCTCC...CTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGCATACCCTTGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGCTTCACATGGTTACCTaGGAAGAGGAAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VTASRQISPCMMLKVRAWLHMVT*EEEIAG
Trigger: TCCTGCTATTTCCTCTTCCCAGGTAACCATGTGAAG...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp ATAGGCAAGGGTATGCCCTTTTTACCTTCTGATTCTGAACTCCTTCCTGGGCAGCACTCAAGTAAAGGCTaGAAAGAGGGCAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IGKGMPFLPSDSELLPGQHSSKG*KEGRGR
Trigger: CCTCCCTCTGCCCTCTTTCCAGCCTTTACTTGAGTG...CTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGCATACCCTTGCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp ATAGGCAAGGGTATGCCCTTTTTACCTTCTGATTCTGAACTCCTTCCTGGGCAGTTCTGGCAGTCCTGCTaGATGATCCGGTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: IGKGMPFLPSDSELLPGQFWQSC*MIRWIF
Trigger: AAAGATCCACCGGATCATTCAGCAGGACTGCCAGAA...CTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGCATACCCTTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp TTTCCTCCCCATTCTGCTCTGCGAACAACGCACAGTCCAGCCAGGAGCTCAACATTGTTGTGTCATGGCTaGGATCAAAGTCATTGTACA +
Preference number: 4 (lower is better)
Translates to: FPPHSALRTTHSPARSSTLLCHG*DQSHCT
Trigger: TGTACAATGACTTTGATCTCAGCCATGACACAACAA...TGTTGAGCTCCTGGCTGGACTGTGCGTTGTTCGCAGAGCAGAATGGGGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTGAGAGCTTGGTGTCCTaGAAGCCAAACGCGGAAAGT +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFESLVS*KPNAES
Trigger: ACTTTCCGCGTTTGGCTTTCAGGACACCAAGCTCTC...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCAGGCTGATCTTTGCTTaGACGTGGGGTTTCATTTGG +
Preference number: 4 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGRLIFA*TWGFIW
Trigger: CCAAATGAAACCCCACGTTCAAGCAAAGATCAGCCT...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCAGGAGCTACCTCTTCCTaGATCAGGGACATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKAGATSS*IRDIFQ
Trigger: TTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTCC...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCACTGGATTTGTCATTTTaGTGTCAGAACAGGCCTACA +
Preference number: 4 (lower is better)
Translates to: RNASGRSACGKGERGSKALDLSF*CQNRPT
Trigger: TGTAGGCCTGTTCTGACAGCAAAATGACAAATCCAG...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGACCTCAAGGAAGAACTaGCCAGGACATCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLTSRKN*PGHHSR
Trigger: CCTGGAATGATGTCCTGGGCAGTTCTTCCTTGAGGT...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp ATAGGCAAGGGTATGCCCTTTTTACCTTCTGATTCTGAACTCCTTCCTGGGCAGCCGGAAAGCAAGAAATaGATCTGGGAGGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: IGKGMPFLPSDSELLPGQPESKK*IWEVSM
Trigger: CATGCTGACCTCCCAGATGCATTTCTTGCTTTCCGG...CTGCCCAGGAAGGAGTTCAGAATCAGAAGGTAAAAAGGGCATACCCTTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp TTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAAATACCTGAGATCTCACCATaGAGAGGTAACATGTGCATC +
Preference number: 4 (lower is better)
Translates to: FVWMVSAHPAHSAATLKIPEISP*RGNMCI
Trigger: GATGCACATGTTACCTCTGCATGGTGAGATCTCAGG...TATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp AGAAATGCATCTGGGAGGTCAGCATGTGGTAAAGGGGAGCGGGGAAGTAAGGCAGCAAATAAGAACCACTaGAGAGTTCTTTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: RNASGRSACGKGERGSKAANKNH*RVLCPQ
Trigger: CTGTGGACAAAGAACTCTGCAGTGGTTCTTATTTGC...TGCCTTACTTCCCCGCTCCCCTTTACCACATGCTGACCTCCCAGATGCATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGACTCCATCACCTGTCTaGGCACATACCGAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLTPSPV*AHTESL
Trigger: CAAAGACTCGGTATGTGCCCAGACAGGTGATGGAGT...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTAGGGACAGTGTGCCATaGCAACACTGTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFRDSVP*QHCLSA
Trigger: AGCAGACAGACAGTGTTGCCATGGCACACTGTCCCT...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATTTCAGAAAGAACAATTaGGAAAGGGTGGGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHFRKNN*ERVGKQ
Trigger: CTGTTTGCCCACCCTTTCCCAATTGTTCTTTCTGAA...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCAAAGAAAGAAGCCAATaGATTTGGTTTGAGCAACTG +
Preference number: 4 (lower is better)
Translates to: PGGECHLIFVLLSWSACLKERSQ*IWFEQL
Trigger: CAGTTGCTCAAACCAAATCCATTGGCTTCTTTCTTT...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCCAGACACATACTTATTaGTCGTATTGCTTAGGAGAT +
Preference number: 4 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVQTHTY*SYCLGD
Trigger: ATCTCCTAAGCAATACGACCAATAAGTATGTGTCTG...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTCTGTGCAGGCATCTCTaGCGAGCCTTATCACAGTCT +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFLCRHL*RALSQS
Trigger: AGACTGTGATAAGGCTCGCCAGAGATGCCTGCACAG...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CAGGGAGGGTTTTCTTGTTGTGTCATGGCTGAGATCAAAGTCATTGTACACCAAGGCAGTCCTGCTGAATaGTCCGGTGGATCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: QGGFSCCVMAEIKVIVHQGSPAE*SGGSFC
Trigger: ACAGAAAGATCCACCGGATCATTCAGCAGGACTGCC...TTGGTGTACAATGACTTTGATCTCAGCCATGACACAACAAGAAAACCCTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTAGCCAACAACATTTATaGCAAATCCCATTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSASQQHL*QIPFPR
Trigger: TCTTGGGAATGGGATTTGGCATAAATGTTGTTGGCT...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GTGAAATCTGAGATGTCCATTAGAGACCTAAGTGGAGATGTCAGTAGCAAACTGCCTTCAGGATGGTCCTaGTTTTCCCCCAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: VKSEMSIRDLSGDVSSKLPSGWS*FSPSTC
Trigger: ACAGGTGCTGGGGGAAAAGCAGGACCATCCTGAAGG...CAGTTTGCTACTGACATCTCCACTTAGGTCTCTAATGGACATCTCAGATTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTCTTTATAGTAAGTGGTaGCATGAATCTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: AESQSLGVNATLSLSSSALYSKW*HESLAL
Trigger: AAGAGCGAGAGATTCATGCCACCACTTACTATAAAG...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCCCACTTTATAGTAAGTaGTGGCATGAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: HDAESQSLGVNATLSLSSPLYSK*WHESLA
Trigger: AGCGAGAGATTCATGCCACCACTTACTATAAAGTGG...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGGTCTTTGTCTTCTCTaGTTACATAGTATAGGTTAT +
Preference number: 4 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRGLCLL*LHSIGY
Trigger: ATAACCTATACTATGTAACCAGAGAAGACAAAGACC...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CCA 90 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCGGTCTTTGTCTTCTCTaGTTACATAGTATAGGTTAT +
Preference number: 4 (lower is better)
Translates to: GGECHLIFVLLSWSACLCGLCLL*LHSIGY
Trigger: ATAACCTATACTATGTAACCAGAGAAGACAAAGACC...GCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR TCA 90 bp CTAAAGGATCTCCAGCTGAGCCACGAAGAGCTTATCACATCAAGAGCAAATGCACTGGCTTTGGGCCTGTaGAATCTGAGATGTCCATTA +
Preference number: 4 (lower is better)
Translates to: LKDLQLSHEELITSRANALALGL*NLRCPL
Trigger: TAATGGACATCTCAGATTTCACAGGCCCAAAGCCAG...TGCATTTGCTCTTGATGTGATAAGCTCTTCGTGGCTCAGCTGGAGATCCTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTAAATATACTATGAATTaGCTTGGAAGTGGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTKYTMN*LGSGVL
Trigger: AAGGACACCACTTCCAAGGCAATTCATAGTATATTT...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp CAGGGAGGGTTTTCTTGTTGTGTCATGGCTGAGATCAAAGTCATTGTACACCAACTCTGCCTAGGCATTTaGCTGCCTCATGTCACTATC +
Preference number: 4 (lower is better)
Translates to: QGGFSCCVMAEIKVIVHQLCLGI*LPHVTI
Trigger: GATAGTGACATGAGGCAGCCAAATGCCTAGGCAGAG...TTGGTGTACAATGACTTTGATCTCAGCCATGACACAACAAGAAAACCCTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp CTGAAACATGTGCACACTAAGAGAACTGGAGAATGTTaGCTCAGTTTCCCTCCTTTTCAGGGGAACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LKHVHTKRTGEC*LSFPPFQGNPL
Trigger: CAGAGGGTTCCCCTGAAAAGGAGGGAAACTGAGCAAACATTCTCCAGTTCTCTTAGTGTGCACATGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp CAAATCCTTGACCAGACAGTAGCACTATTTGTCTTCTaGCCTACACAAGCTACATGTGGGGTTCACACCTCC +
Preference number: 4 (lower is better)
Translates to: QILDQTVALFVF*PTQATCGVHTS
Trigger: GGAGGTGTGAACCCCACATGTAGCTTGTGTAGGCAAGAAGACAAATAGTGCTACTGTCTGGTCAAGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CTAAAGGATCTCCAGCTGAGCCACGAAGAGCTTATCACATCAAGAGCAAATGCATGTCCAGGATATCCCTaGTGTAGAGTTTTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKDLQLSHEELITSRANACPGYP*CRVLQR
Trigger: CCTTTGCAAAACTCTACATCAGGGATATCCTGGACA...TGCATTTGCTCTTGATGTGATAAGCTCTTCGTGGCTCAGCTGGAGATCCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp TACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTGGCATTACAAAAGTCTATaGCAGGAGGCAATCTACTGG +
Preference number: 4 (lower is better)
Translates to: YLLVVLLRRCVRHCSRCWHYKSL*QEAIYW
Trigger: CCAGTAGATTGCCTCCTGTCATAGACTTTTGTAATG...CCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGCATAGTATTTCATTGTaGCCAAGAACCGTAATTAAC +
Preference number: 4 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLHSISL*PRTVIN
Trigger: GTTAATTACGGTTCTTGGGCACAATGAAATACTATG...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAAGGCAGCCAGACACATACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCCTTTATAGTAAGTGGTaGCATGAATCTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: EGSQTHTYWSYCLGDASGLYSKW*HESLAL
Trigger: AAGAGCGAGAGATTCATGCCACCACTTACTATAAAG...GCCTGACGCATCTCCTAAGCAATACGACCAATAAGTATGTGTCTGGCTGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATTTTATTTTTGCTGGCTaGATTTGTCATTTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHFIFAG*ICHFAV
Trigger: GACAGCAAAATGACAAATCCAGCCAGCAAAAATAAA...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTGCAATGAACACCTTGTaGAACCATCCTTTCACACTT +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFAMNTL*NHPFTL
Trigger: AAGTGTGAAAGGATGGTTGCACAAGGTGTTCATTGC...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAAAGCAGTTAAGATTCTaGAGATATTCTGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: DAESQSLGVNATLSLSSSKQLRF*RYSEGR
Trigger: TCTACCTTCAGAATATCTCCAGAATCTTAACTGCTT...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp CTGATGTTGCTTAGAAGACAGAGGCCTACCTCATTCTaGGTTTACTCATGCTTCAGGTTACATGAATGTGGG +
Preference number: 4 (lower is better)
Translates to: LMLLRRQRPTSF*VYSCFRLHECG
Trigger: CCCACATTCATGTAACCTGAAGCATGAGTAAACCAAGAATGAGGTAGGCCTCTGTCTTCTAAGCAACATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp TACTTATTGGTCGTATTGCTTAGGAGATGCGTCAGGCACTGTTCTAGGTGCTGGAGGTCTCTGATAACCTaGAGTTTTGAAAAGCTTAGA +
Preference number: 4 (lower is better)
Translates to: YLLVVLLRRCVRHCSRCWRSLIT*SFEKLR
Trigger: TCTAAGCTTTTCAAAACTTCAGGTTATCAGAGACCT...CCAGCACCTAGAACAGTGCCTGACGCATCTCCTAAGCAATACGACCAATAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACATTATCACAGTCTTTCTaGGTTTGCCTGTATGCTTCA +
Preference number: 4 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTLSQSF*VCLYAS
Trigger: TGAAGCATACAGGCAAACTCAGAAAGACTGTGATAA...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TCATTTTGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTTTACCATGTTCACTACCCTGTaGTGTCCCTTTGCCATGGAA +
Preference number: 4 (lower is better)
Translates to: SFCCQNRPTTYLRCFSFTMFTTL*CPFAME
Trigger: TTCCATGGCAAAGGGACACCACAGGGTAGTGAACAT...GGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GTGAAATCTGAGATGTCCATTAGAGACCTAAGTGGAGATGTCAGTAGCAAACTGTACACAAGCTACATGTaGGGTTCACACCTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VKSEMSIRDLSGDVSSKLYTSYM*GSHLLK
Trigger: TTTCAGGAGGTGTGAACCCCACATGTAGCTTGTGTA...CAGTTTGCTACTGACATCTCCACTTAGGTCTCTAATGGACATCTCAGATTTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp CTCCACACTTTATTTTTGCTGGCTGGATTTGTCATTTaGCTGTCAGAACAGGCCTACAACATACCTCAGATG +
Preference number: 4 (lower is better)
Translates to: LHTLFLLAGFVI*LSEQAYNIPQM
Trigger: CATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGACAAATCCAGCCAGCAAAAATAAAGTGTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp TGGAAGGAAACAAAACAGAGAATTCTGCCATCATGGAACATTCTGTCTATTGGGAGCACCAAAGAAGAATaGGAATGTGCTGACAGTGGA +
Preference number: 4 (lower is better)
Translates to: WKETKQRILPSWNILSIGSTKEE*ECADSG
Trigger: TCCACTGTCAGCACATTCTCATTCTTCTTTGGTGCT...CCCAATAGACAGAATGTTCCATGATGGCAGAATTCTCTGTTTTGTTTCCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp AGGATAGCTATGTGGGGTAAAAAGCACCTGAGATCTCACCATGCAGAGGTAACACATTCTGGATTACAATaGAAACTCACTTATGTGGGA +
Preference number: 4 (lower is better)
Translates to: RIAMWGKKHLRSHHAEVTHSGLQ*KLTYVG
Trigger: TCCCACATAAGTGAGTTTTCATTGTAATCCAGAATG...TGTTACCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCCACATAGCTATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GTGAAATCTGAGATGTCCATTAGAGACCTAAGTGGAGATGTCAGTAGCAAACTGCCACTTTATAGTAAGTaGTGGCATGAATCTCTCGCT +
Preference number: 4 (lower is better)
Translates to: VKSEMSIRDLSGDVSSKLPLYSK*WHESLA
Trigger: AGCGAGAGATTCATGCCACCACTTACTATAAAGTGG...CAGTTTGCTACTGACATCTCCACTTAGGTCTCTAATGGACATCTCAGATTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp GAGCTACCTCTTCCTGAATCAGGGACATTTTCCAAAGGAGTGGCACAGGATTTTGAAAACTCACTTATGTaGGAGTTTGAGCTCACATTT +
Preference number: 4 (lower is better)
Translates to: ELPLPESGTFSKGVAQDFENSLM*EFELTF
Trigger: AAATGTGAGCTCAAACTCCCACATAAGTGAGTTTTC...AAAATCCTGTGCCACTCCTTTGGAAAATGTCCCTGATTCAGGAAGAGGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp AGGTATGATAGAAAGAAAGAAGCCAATGGATTTGGTTaGAGCAACTGGATGGAGCTACCTCTTCCTGAATCA +
Preference number: 4 (lower is better)
Translates to: RYDRKKEANGFG*SNWMELPLPES
Trigger: TGATTCAGGAAGAGGTAGCTCCATCCAGTTGCTCAAACCAAATCCATTGGCTTCTTTCTTTCTATCATACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp GAGATCTCACCATGCAGAGGTAACATGTGCATCCCTTaGGTGAGAATTTCTAGTAATCTGTCTGATGTGTAT +
Preference number: 4 (lower is better)
Translates to: EISPCRGNMCIP*VRISSNLSDVY
Trigger: ATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTTACCTCTGCATGGTGAGATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp TTCTGGATTACAATGAAAACTCACTTATGTGGGAGTTaGAGCTCACATTTACAGCCTCCACCAGCAGAAATC +
Preference number: 4 (lower is better)
Translates to: FWITMKTHLCGS*SSHLQPPPAEI
Trigger: GATTTCTGCTGGTGGAGGCTGTAAATGTGAGCTCAAACTCCCACATAAGTGAGTTTTCATTGTAATCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp AGGATAGCTATGTGGGGTAAAAAGCACCTGAGATCTCACCATGCAGAGGTAACAGAACATTCTGTCTATTaGGGGAAAATAATAAACAGG +
Preference number: 4 (lower is better)
Translates to: RIAMWGKKHLRSHHAEVTEHSVY*GKIINR
Trigger: CCTGTTTATTATTTTCCCCCAATAGACAGAATGTTC...TGTTACCTCTGCATGGTGAGATCTCAGGTGCTTTTTACCCCACATAGCTATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp TCATTTTGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTTTACCCAAAGGATAGCTATGTaGGGTAAAAAGCACCTGAGA +
Preference number: 4 (lower is better)
Translates to: SFCCQNRPTTYLRCFSFTQRIAM*GKKHLR
Trigger: TCTCAGGTGCTTTTTACCCCACATAGCTATCCTTTG...GGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp AACATGTGCATCCCTTTGGTGAGAATTTCTAGTAATCTGTCTGATGTGTATAATCTGACAGTGGAAGAGTaGGCAAAGCTGGGAGTTTTA +
Preference number: 4 (lower is better)
Translates to: NMCIPLVRISSNLSDVYNLTVEE*AKLGVL
Trigger: TAAAACTCCCAGCTTTGCTCACTCTTCCACTGTCAG...ATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR GCA 90 bp TCATTTTGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTTTACCCACTATTTGTCTTCTTaGCTACACAAGCTACATGTG +
Preference number: 4 (lower is better)
Translates to: SFCCQNRPTTYLRCFSFTHYLSS*LHKLHV
Trigger: CACATGTAGCTTGTGTAGGCAAGAAGACAAATAGTG...GGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp TGGAAGGAAACAAAACAGAGAATTCTGCCATCATGGAACATTCTGTCTATTGGGAGCTGGGAGTTTTATTaGGTGATGAAACAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: WKETKQRILPSWNILSIGSWEFY*VMKQFS
Trigger: TGAAAACTGTTTCATCACTCAATAAAACTCCCAGCT...CCCAATAGACAGAATGTTCCATGATGGCAGAATTCTCTGTTTTGTTTCCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR TCA 90 bp TCATTTTGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTTTACCATGTTCTTAGAGTTCTaGTGTTGCTTAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: SFCCQNRPTTYLRCFSFTMFLEF*CCLEDR
Trigger: TCTGTCTTCTAAGCAACATCAGAACTCTAAGAACAT...GGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CCA 90 bp AACATGTGCATCCCTTTGGTGAGAATTTCTAGTAATCTGTCTGATGTGTATAATTACATGAATGTGGGGTaGGGAGTGGGAAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: NMCIPLVRISSNLSDVYNYMNVG*GVGNSF
Trigger: AAAGCTATTTCCCACTCCCCACCCCACATTCATGTA...ATTATACACATCAGACAGATTACTAGAAATTCTCACCAAAGGGATGCACATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
3UTR CAA 72 bp TATTCTGAAGGTAGAGCCAAAAGACTTGCAGACAGATaGGATGTGAGGTATGATAGAAAGAAAGAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: YSEGRAKRLADR*DVRYDRKKEAN
Trigger: ATTGGCTTCTTTCTTTCTATCATACCTCACATCCAATCTGTCTGCAAGTCTTTTGGCTCTACCTTCAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GCAAGCCAGATAGAAAAGAGGTCTGGGACTGAGTCCTCAGGGAGGCAGAGCACTCCACCTGGGCCTCGCTaGACCATGCTACCTGCTGCA +
Preference number: 5 (lower is better)
Translates to: ASQIEKRSGTESSGRQSTPPGPR*TMLPAA
Trigger: TGCAGCAGGTAGCATGGTCAAGCGAGGCCCAGGTGG...AGTGCTCTGCCTCCCTGAGGACTCAGTCCCAGACCTCTTTTCTATCTGGCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGACAGCCAAGGTGCTGTaGGCTGAGGCTGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLTAKVL*AEAAPW
Trigger: CCAGGGAGCAGCCTCAGCCAACAGCACCTTGGCTGT...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCGCTCTCTTGCTGCACTaGGAGCAGCTGATACAGACT +
Preference number: 5 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVALLLH*EQLIQT
Trigger: AGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGC...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGCTCTCTTGCTGCACTaGGAGCAGCTGATACAGACT +
Preference number: 5 (lower is better)
Translates to: QSLGVNATLSLSSSAGLRALLLH*EQLIQT
Trigger: AGTCTGTATCAGCTGCTCCAAGTGCAGCAAGAGAGC...ACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CAA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCCCACCTGCCAGGCAATaGGCTGACTGCCTCCGTGAT +
Preference number: 5 (lower is better)
Translates to: HDAESQSLGVNATLSLSSPPARQ*ADCLRD
Trigger: ATCACGGAGGCAGTCAGCCAATTGCCTGGCAGGTGG...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp TTTCAACAGAGAGGAGACGTGGGGGTGGTCCCCCTACCCAAAGGCAGGAAAGTCGGGACAGGAGATGGGTaGCAAACAGCGAAAGAGGAA +
Preference number: 5 (lower is better)
Translates to: FQQRGDVGVVPLPKGRKVGTGDG*QTAKEE
Trigger: TTCCTCTTTCGCTGTTTGCAACCCATCTCCTGTCCC...GACTTTCCTGCCTTTGGGTAGGGGGACCACCCCCACGTCTCCTCTCTGTTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CCTCTGTGCAGCCTCAGGCTCCTACCTGGGGCAAGACCGAAGGCTGTAGGAGAGCACTTATGTGGGAGTTaGAGCTCACATTTACAGCCT +
Preference number: 5 (lower is better)
Translates to: PLCSLRLLPGARPKAVGEHLCGS*SSHLQP
Trigger: AGGCTGTAAATGTGAGCTCAAACTCCCACATAAGTG...CTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCATCCACTTGGCTTCTCTaGGCCAGCATCCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: DAESQSLGVNATLSLSSSSTWLL*ASILAH
Trigger: GTGTGCCAGGATGCTGGCCAAGAGAAGCCAAGTGGA...TGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GGAAAGGGTGGGCAAACAGGAACAGAAGTTCCCACTCTGCGTGGTGGGTTTCATGCACATACCGAGTCTTaGTCTGGATGGTGTCAGCAC +
Preference number: 5 (lower is better)
Translates to: GKGGQTGTEVPTLRGGFHAHTES*SGWCQH
Trigger: GTGCTGACACCATCCAGACAAAGACTCGGTATGTGC...ATGAAACCCACCACGCAGAGTGGGAACTTCTGTTCCTGTTTGCCCACCCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCCCCCGATCTCTATCTTaGTTTTCTGCTCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: PGGECHLIFVLLSWSACLPRSLS*FSAQWS
Trigger: AGACCATTGAGCAGAAAACAAAGATAGAGATCGGGG...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CAA 90 bp GTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGGCCTTCTCCATGTGATTaGGTTTCTGGCAGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: VTASRQISPCMMLKVRAWPSPCD*VSGSPA
Trigger: AGCAGGACTGCCAGAAACCAAATCACATGGAGAAGG...CCAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CAA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGCCTTCTCCATGTGATTaGGTTTCTGGCAGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLPSPCD*VSGSPA
Trigger: AGCAGGACTGCCAGAAACCAAATCACATGGAGAAGG...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CAA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGAATGCCACCTTATCTTaGTCCTCCTCAGCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLNATLS*SSSAGL
Trigger: CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATT...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CAA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGGCTGGATTTGTCATTTaGCTGTCAGAACAGGCCTAC +
Preference number: 5 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLAGFVI*LSEQAY
Trigger: GTAGGCCTGTTCTGACAGCAAAATGACAAATCCAGC...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CCTCTGTGCAGCCTCAGGCTCCTACCTGGGGCAAGACCGAAGGCTGTAGGAGAGTGGAAGAGTGAGCACTaGCTAATTATAAAAATGCCA +
Preference number: 5 (lower is better)
Translates to: PLCSLRLLPGARPKAVGEWKSEH*LIIKMP
Trigger: TGGCATTTTTATAATTAGCAAGTGCTCACTCTTCCA...CTCTCCTACAGCCTTCGGTCTTGCCCCAGGTAGGAGCCTGAGGCTGCACAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCACTTGGTTTCAGTCCTaGGCACTAAGTCTTAGGTTC +
Preference number: 5 (lower is better)
Translates to: PGGECHLIFVLLSWSACLTWFQS*ALSLRF
Trigger: GAACCTAAGACTTAGTGCCAAGGACTGAAACCAAGT...GAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS GCA 90 bp GAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTaGTCAGAACGCTGTGTAGTAGTGCTCCATTGTGCTGACAATGTC +
Preference number: 5 (lower is better)
Translates to: ECHLIFVLLSWSACL*SERCVVVLHCADNV
Trigger: GACATTGTCAGCACAATGGAGCACTACTACACAGCGTTCTGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
CDS-3UTR CAA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCCCCGATCTCTATCTTaGTTTTCTGCTCAATGGTCT +
Preference number: 5 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLPRSLS*FSAQWS
Trigger: AGACCATTGAGCAGAAAACAAAGATAGAGATCGGGG...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224950.8
ENST00000369764.1
CDS-3UTR CAA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTTACTTATTGGTCGTATaGCTTAGGAGATGCGTCAGG +
Preference number: 5 (lower is better)
Translates to: AESQSLGVNATLSLSSSAYLLVV*LRRCVR
Trigger: CCTGACGCATCTCCTAAGCAATACGACCAATAAGTA...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp AGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTGGTCTGCCAGACACATACTTATaGGTCGTATTGCTTAGGAGA +
Preference number: 5 (lower is better)
Translates to: SQSLGVNATLSLSSSAGLPDTYL*VVLLRR
Trigger: TCTCCTAAGCAATACGACCAATAAGTATGTGTCTGG...CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTCTGAGATCAAAGTCATaGTACACCAAGGACATAGTG +
Preference number: 5 (lower is better)
Translates to: AESQSLGVNATLSLSSSALRSKS*YTKDIV
Trigger: CACTATGTCCTTGGTGTACAATGACTTTGATCTCAG...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CTAAAGGATCTCCAGCTGAGCCACGAAGAGCTTATCACATCAAGAGCAAATGCATTTTTCTCGGTCACTTaGCAAGCCAGGGACCTCTGG +
Preference number: 5 (lower is better)
Translates to: LKDLQLSHEELITSRANAFFSVT*QARDLW
Trigger: CCAGAGGTCCCTGGCTTGCAAAGTGACCGAGAAAAA...TGCATTTGCTCTTGATGTGATAAGCTCTTCGTGGCTCAGCTGGAGATCCTTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTCTGCATAGTATTTCATaGTGCCCAAGAACCGTAATT +
Preference number: 5 (lower is better)
Translates to: AESQSLGVNATLSLSSSALHSIS*CPRTVI
Trigger: AATTACGGTTCTTGGGCACAATGAAATACTATGCAG...AGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CTTCCACACTGGTTGAGTTCTTGCCCAGCACCAAAGAAGAATGAGAATGTGCTGAGGCCTACCTCATTCTaGGTTTACTCATGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPHWLSSCPAPKKNENVLRPTSF*VYSCFR
Trigger: CCTGAAGCATGAGTAAACCAAGAATGAGGTAGGCCT...CAGCACATTCTCATTCTTCTTTGGTGCTGGGCAAGAACTCAACCAGTGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp TTTGTCTGGATGGTGTCAGCACATCCTGCACACTCAGCGGCAACCCTGAAAATACTTAGAGTTCTGATGTaGCTTAGAAGACAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FVWMVSAHPAHSAATLKILRVLM*LRRQRP
Trigger: AGGCCTCTGTCTTCTAAGCAACATCAGAACTCTAAG...TATTTTCAGGGTTGCCGCTGAGTGTGCAGGATGTGCTGACACCATCCAGACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CTGCATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCGCACTATTTGTCTTCTaGCCTACACAAGCTACATGT +
Preference number: 5 (lower is better)
Translates to: LHDAESQSLGVNATLSLSALFVF*PTQATC
Trigger: ACATGTAGCTTGTGTAGGCAAGAAGACAAATAGTGC...GGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS GCA 90 bp CTGCCTCTGACTCGGATCGTGTCCCCGATCTCTATCTTTGTTTTCTaGTCAATGGTCTCTTGTAGCTTCTTAAGTTGTGAGGTTAAGCTG +
Preference number: 5 (lower is better)
Translates to: LPLTRIVSPISIFVF*SMVSCSFLSCEVKL
Trigger: CAGCTTAACCTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAAAACAAAGATAGAGATCGGGGACACGATCCGAGTCAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
CDS-3UTR CAA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACACTTCTTAAAATTCACTaGGTCGGAGGAGGCACTGTG +
Preference number: 5 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTLLKIH*VGGGTV
Trigger: CACAGTGCCTCCTCCGACCAAGTGAATTTTAAGAAG...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp TCATTTTGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTTTACCCCCTGTGGTGTCCCTTaGCCATGGAAGAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: SFCCQNRPTTYLRCFSFTPCGVP*PWKRLQ
Trigger: TTGGAGTCTCTTCCATGGCAAAGGGACACCACAGGG...GGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTTGTCCTCCCTCCACACTTTATTTTaGCTGGCTGGATTTGTCATT +
Preference number: 5 (lower is better)
Translates to: HDAESQSLGVNATLSLSSLHTLF*LAGFVI
Trigger: AATGACAAATCCAGCCAGCAAAAATAAAGTGTGGAG...GGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GTGACTTCTGAGCACTTCCAGCCTGCACAGCCTACTAAGACATGTGAGAAAGCAATTCAGAAAGAACAATaGGGAAAGGGTGGGCAAACA +
Preference number: 5 (lower is better)
Translates to: VTSEHFQPAQPTKTCEKAIQKEQ*GKGGQT
Trigger: TGTTTGCCCACCCTTTCCCAATTGTTCTTTCTGAAT...TGCTTTCTCACATGTCTTAGTAGGCTGTGCAGGCTGGAAGTGCTCAGAAGTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GGTAACTGCCTCCAGACAGATAAGCCCCTGCATGATGCTGAAAGTCAGAGCCTGAAGCTGGGAGTTTTATaGAGTGATGAAACAGTTTTC +
Preference number: 5 (lower is better)
Translates to: GNCLQTDKPLHDAESQSLKLGVL*SDETVF
Trigger: GAAAACTGTTTCATCACTCAATAAAACTCCCAGCTT...CAGGCTCTGACTTTCAGCATCATGCAGGGGCTTATCTGTCTGGAGGCAGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp GTGAAATCTGAGATGTCCATTAGAGACCTAAGTGGAGATGTCAGTAGCAAACTGACACCGGTTGAATTCTaGTCCAGCGCCCAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: VKSEMSIRDLSGDVSSKLTPVEF*SSAQEE
Trigger: TTCTTCTTGGGCGCTGGACAAGAATTCAACCGGTGT...CAGTTTGCTACTGACATCTCCACTTAGGTCTCTAATGGACATCTCAGATTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp TCATTTTGCTGTCAGAACAGGCCTACAACATACCTCAGATGTTTTTCCTTTACCAATGCCACCTTATCTTaGTCCTCCTCAGCTGGTCTG +
Preference number: 5 (lower is better)
Translates to: SFCCQNRPTTYLRCFSFTNATLS*SSSAGL
Trigger: CAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATT...GGTAAAGGAAAAACATCTGAGGTATGTTGTAGGCCTGTTCTGACAGCAAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACAAGACTTGCAGACAGATaGGATGTGAGGTATGATAGA +
Preference number: 5 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTRLADR*DVRYDR
Trigger: TCTATCATACCTCACATCCAATCTGTCTGCAAGTCT...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS-3UTR CAA 90 bp CTGAGATCAAAGTCATTGTACACCAAGGACATAGTGGACAGAAGGGAGCCAACAAGAACTGGAGAATGTTaGCTCAGTTTCCCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: LRSKSLYTKDIVDRREPTRTGEC*LSFPPF
Trigger: AAAAGGAGGGAAACTGAGCAAACATTCTCCAGTTCT...TGTTGGCTCCCTTCTGTCCACTATGTCCTTGGTGTACAATGACTTTGATCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS GCA 72 bp TCACTGAGTCAAGCATTTGTAGCCCCTCCCGCCGCCTaGAGCTCCAGGAGCCCTGAGACCTGGCCCTTCCGG +
Preference number: 6 (lower is better)
Translates to: SLSQAFVAPPAA*SSRSPETWPFR
Trigger: CCGGAAGGGCCAGGTCTCAGGGCTCCTGGAGCTGCAGGCGGCGGGAGGGGCTACAAATGCTTGACTCAGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224950.8
CDS CCA 72 bp CAGCAAACTCGTGAGACTGGGGAGGTCCAGGGCGCCTaGATTGCGGTTCTCTGTGTCTCCTCTCAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: QQTRETGEVQGA*IAVLCVSSQSS
Trigger: AGAACTCTGAGAGGAGACACAGAGAACCGCAATCCAGGCGCCCTGGACCTCCCCAGTCTCACGAGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466828.5
CDS CAA 90 bp CATGATGCTGAAAGTCAGAGCCTGGGGGTGAATGCCACCTTATCTTaGTCCTCCTCAGCTGGTCTGCGTGTCTCTGCTCAGAACGCTGTG +
Preference number: 6 (lower is better)
Translates to: HDAESQSLGVNATLS*SSSAGLRVSAQNAV
Trigger: CACAGCGTTCTGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCCAGGCTCTGACTTTCAGCATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
CDS CCA 72 bp GGGGGTGAATGCCACCTTATCTTTGTCCTCCTCAGCTaGTCTGCGTGTCTCTGCTCAGAACGCTGTGTAGTA +
Preference number: 6 (lower is better)
Translates to: GGECHLIFVLLS*SACLCSERCVV
Trigger: TACTACACAGCGTTCTGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAGGTGGCATTCACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
CDS GCA 72 bp CTTATCTTTGTCCTCCTCAGCTGGTCTGCGTGTCTCTaGTCAGAACGCTGTGTAGTAGTGCTCCATTGTGCT +
Preference number: 6 (lower is better)
Translates to: LIFVLLSWSACL*SERCVVVLHCA
Trigger: AGCACAATGGAGCACTACTACACAGCGTTCTGAGCAGAGACACGCAGACCAGCTGAGGAGGACAAAGATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
CDS TCA 72 bp TCTCTCGCTCTTCTCTGTATGTGCGGATACTGCCTCTaGCTCGGATCGTGTCCCCGATCTCTATCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: SLALLCMCGYCL*LGSCPRSLSLF
Trigger: AAACAAAGATAGAGATCGGGGACACGATCCGAGTCAGAGGCAGTATCCGCACATACAGAGAAGAGCGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
ENST00000472951.1
CDS GCA 72 bp ACTCGGATCGTGTCCCCGATCTCTATCTTTGTTTTCTaGTCAATGGTCTCTTGTAGCTTCTTAAGTTGTGAG +
Preference number: 6 (lower is better)
Translates to: TRIVSPISIFVF*SMVSCSFLSCE
Trigger: CTCACAACTTAAGAAGCTACAAGAGACCATTGAGCAGAAAACAAAGATAGAGATCGGGGACACGATCCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224950.8
ENST00000369764.1
ENST00000466828.5
CDS CAA 72 bp AGGTTTACTGGACGCACATCCAGAAAAACCACCAATTaGGTAGAAATATCTTGTGCTTACAGTAAGTGGTGG +
Preference number: 6 (lower is better)
Translates to: RFTGRTSRKTTN*VEISCAYSKWW
Trigger: CCACCACTTACTGTAAGCACAAGATATTTCTACCAAATTGGTGGTTTTTCTGGATGTGCGTCCAGTAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472951.1