Pregenerated sensors for STMN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000104435Ensembl transcript IDs: ENST00000220876.12
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATTTGGCACAAATGCCCTaGCTAGCCCCCTTAACTGCG | + |
|
Preference number: 2 (lower is better) Translates to: WELGRNDFKTAIGTYGGYLAQMP*LAPLTA Trigger: CGCAGTTAAGGGGGCTAGGCAGGGCATTTGTGCCAA...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTGGGATTTACTATTGGTaGGGCGTGCCAGACCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFGIYYW*GVPDPP Trigger: GGGAGGGTCTGGCACGCCCCACCAATAGTAAATCCC...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATTGCTTCTACCCAGATTaGTCTCAGGTCTGTCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: WELGRNDFKTAIGTYGGYCFYPD*SQVCLL Trigger: GAGAAGACAGACCTGAGACCAATCTGGGTAGAAGCA...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAAAGGGGGATTTACTATTaGTGGGGCGTGCCAGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: EWKDTTSKACYRTCKIMKRGIYY*WGVPDP Trigger: AGGGTCTGGCACGCCCCACCAATAGTAAATCCCCCT...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTCCTAGCAAATTCATTTaGGTGGAAAGACACAACATC | + |
|
Preference number: 2 (lower is better) Translates to: RSWELGRNDFKTAIGTYGPSKFI*VERHNI Trigger: GATGTTGTGTCTTTCCACTCAAATGAATTTGCTAGG...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR TCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGCAGTAAGTAGATTATaGGCGAACAAATGTGAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RSWELGRNDFKTAIGTYGAVSRL*ANKCEG Trigger: ACCTTCACATTTGTTCGCTCATAATCTACTTACTGC...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGAGAAGCAGAAGTAAATaGTATGACTGGTGGTATTTC | + |
|
Preference number: 2 (lower is better) Translates to: QELGVGEKRLQNCDRYLWRSRSK*YDWWYF Trigger: GAAATACCACCAGTCATAGCATTTACTTCTGCTTCT...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGACCTCATTTTTCTTTTaGAATGGAGTTAGACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: QELGVGEKRLQNCDRYLWTSFFF*NGVRHG Trigger: CCCATGTCTAACTCCATTCCAAAAGAAAAATGAGGT...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATAGTAAATGCTATGACTaGTGGTATTTCTTAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WELGRNDFKTAIGTYGGYSKCYD*WYFLAW Trigger: CCAGGCTAAGAAATACCACCAGTCATAGCATTTACT...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATTCAAGCAAAACATTCTaGAAAGAGACCGCATTGATT | + |
|
Preference number: 2 (lower is better) Translates to: WELGRNDFKTAIGTYGGYSSKTF*KETALI Trigger: AATCAATGCGGTCTCTTTGCAGAATGTTTTGCTTGA...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR TCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTATACATTCCCCATCCTaGTATCGCATGATCCATTAT | + |
|
Preference number: 2 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFIHSPS*YRMIHY Trigger: ATAATGGATCATGCGATATCAGGATGGGGAATGTAT...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATCAGGGGGATTTACTATaGGTGGGGCGTGCCAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: WELGRNDFKTAIGTYGGYQGDLL*VGRARP Trigger: GGGTCTGGCACGCCCCACCAATAGTAAATCCCCCTG...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGGTTTTGTTGTTGGTGTaGTTAGTAGGCAGGATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SWELGRNDFKTAIGTYGGVLLLV*LVGRIA Trigger: GGCAATCCTGCCTACTAACAACACCAACAACAAAAC...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR GCA 72 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTaGGATAGGTACTTATGGTGGGTATCTGGTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: QELGVGEKRLQN*DRYLWWVSGDS Trigger: AGAATCACCAGATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTTGGAGTGTTTTGTTGTaGGTGTTGTTAGTAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RSWELGRNDFKTAIGTYGWSVLL*VLLVGR Trigger: CCTGCCTACTAACAACACCAACAACAAAACACTCCA...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGCAGACGCTGAGCAGTaGCGAAGGCAAAGGGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGRNDFKTAIGTYGADAEQ*RRQRVR Trigger: CCGGACCCTTTGCCTTCGCCACTGCTCAGCGTCTGC...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGATGTGCAGACGCTaGGCAGTGGCGAAGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGRNDFKTAIGTYGGMCRR*AVAKAK Trigger: CTTTGCCTTCGCCACTGCTCAGCGTCTGCACATCCC...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGCGCACCTCCGCAGCATaGCTCTCCTTTTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGRTSAA*LSFSCR Trigger: TCTGCAGGAAAAGGAGAGGCATGCTGCGGAGGTGCG...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGACTATTGGTGGGGCGTaGCAGACCCTCCCTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGTIGGA*QTLPCF Trigger: GAAGCAAGGGAGGGTCTGGCACGCCCCACCAATAGT...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTTGGCACAAATGCCCTaGCTAGCCCCCTTAACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGLAQMP*LAPLTA Trigger: CGCAGTTAAGGGGGCTAGGCAGGGCATTTGTGCCAA...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGAGTTCGTGGGGCTTCTaGGATAGGAGATGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGSSWGF*DRRWWL Trigger: AAGCCACCATCTCCTATCTCAGAAGCCCCACGAACT...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGAGCACCTGGGCCTCCTaGGACTTTCTTCTTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGSTWAS*DFLLSS Trigger: AGAGGAAAGAAGAAAGTCTCAGGAGGCCCAGGTGCT...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGCCTCCGCCATCTTGCTaGAGTTGTTGTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QELGVGEKRLQNCDRYLWPPPSC*SCCSPP Trigger: TGGAGGAGAACAACAACTTCAGCAAGATGGCGGAGG...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGCCAGACAGTTCAACCTaGAGTTCCTTGTTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGPDSST*SSLFLR Trigger: GCGCAGGAACAAGGAACTCCAGGTTGAACTGTCTGG...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | GTCATTAGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTGGGATTTACTATTGGTaGGGCGTGCCAGACCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRQWWVSSTIDCLLTSFGIYYW*GVPDPP Trigger: GGGAGGGTCTGGCACGCCCCACCAATAGTAAATCCC...AAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTAGGGGGATTTACTATTaGTGGGGCGTGCCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGRNDFKTAIGTYGRGIYY*WGVPDP Trigger: AGGGTCTGGCACGCCCCACCAATAGTAAATCCCCCT...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGGCAACCTTCAGGAGTTaGGAGTTGGGGAGAAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: QELGVGEKRLQNCDRYLWATFRS*ELGRND Trigger: GTCGTTTCTCCCCAACTCCCAACTCCTGAAGGTTGC...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTTCCTCCAAAGCCTTCTaGAGGACTTCTCGCTCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFSSKAF*RTSRSC Trigger: ACACGAGCGAGAAGTCCTTCAGAAGGCTTTGGAGGA...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTTGCTTCTACCCAGATTaGTCTCAGGTCTGTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGRNDFKTAIGTYGCFYPD*SQVCLL Trigger: GAGAAGACAGACCTGAGACCAATCTGGGTAGAAGCA...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGATGAGCGAACAAATGTaGAGGTTCATGTGGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QELGVGEKRLQNCDRYLWMSEQM*RFMWSH Trigger: ATGACTCCACATGAACCTTCACATTTGTTCGCTCAT...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATATTAAGCCCACTTTATaGAGAGCGATTTCACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WELGRNDFKTAIGTYGGYIKPTL*RAISRL Trigger: CAGCCGTGAAATCGCTCTTCATAAAGTGGGCTTAAT...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATGAGCGATTTCACGGCTaGTTGAACCATTCGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: WELGRNDFKTAIGTYGGYERFHG*LNHSNL Trigger: CAAATTCGAATGGTTCAAGCAGCCGTGAAATCGCTC...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGAAACGACTTCAAAACTaGGATAGGTACTTATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGKRLQN*DRYLWW Trigger: CCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTT...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | GTCATTAGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTCAGAGGCACGTTTGTTaGTTTGCTTCACTTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: VIRQWWVSSTIDCLLTSFQRHVC*FASLPY Trigger: ATATGGAAGTGAAGCAAATCAACAAACGTGCCTCTG...AAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTATACATTCCCCATCCTaGTATCGCATGATCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSWELGRNDFKTAIGTYGIHSPS*YRMIHY Trigger: ATAATGGATCATGCGATATCAGGATGGGGAATGTAT...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATGCAGTAAGTAGATTATaGGCGAACAAATGTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WELGRNDFKTAIGTYGGYAVSRL*ANKCEG Trigger: ACCTTCACATTTGTTCGCTCATAATCTACTTACTGC...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | GTCATTAGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTATGGTGGGTATCTGGTaGTTCTTAGTTGGCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIRQWWVSSTIDCLLTSFMVGIW*FLVGTN Trigger: ATTTGTGCCAACTAAGAATCACCAGATACCCACCAT...AAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | GTCATTAGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCCTTGTAGGCCATTaGTGTTTTAGCCATTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIRQWWVSSTIDCLLTSFFLVGH*CFSHCR Trigger: CCTACAATGGCTAAAACAGCAATGGCCTACAAGGAA...AAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAATGCCAGACCCTCCCTTaGTTCAGCCAGACAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EWKDTTSKACYRTCKIMKCQTLP*FSQTVQ Trigger: TTGAACTGTCTGGCTGAAGCAAGGGAGGGTCTGGCA...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGAGAAGCAGAAGTAAATaGTATGACTGGTGGTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SWELGRNDFKTAIGTYGGRSRSK*YDWWYF Trigger: GAAATACCACCAGTCATAGCATTTACTTCTGCTTCT...CCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAACCTAGCCCCCTTAACTaGGTCAGCTTCACAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWKDTTSKACYRTCKIMKPSPLN*VSFTDG Trigger: TCCATCTGTGAAGCTGACGCAGTTAAGGGGGCTAGG...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGAAATGCTATGACTGGTaGTATTTCTTAGCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QELGVGEKRLQNCDRYLWKCYDW*YFLAWF Trigger: AAACCAGGCTAAGAAATACCACCAGTCATAGCATTT...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTTCAGGAGTTGGGAGTTaGGGAGAAACGACTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFSGVGS*GETTSK Trigger: TTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTGA...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | GTCATTAGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTGCACGTTTGTTGATTTaGTTCACTTCCATATCATCG | + |
|
Preference number: 4 (lower is better) Translates to: VIRQWWVSSTIDCLLTSFARLLI*FTSISS Trigger: CGATGATATGGAAGTGAAGCAAATCAACAAACGTGC...AAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTTGCGATAGGTACTTATaGTGGGTATCTGGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFCDRYL*WVSGDS Trigger: AGAATCACCAGATACCCACCATAAGTACCTATCGCA...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTCCTAGCAAATTCATTTaGGTGGAAAGACACAACATC | + |
|
Preference number: 4 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFPSKFI*VERHNI Trigger: GATGTTGTGTCTTTCCACTCAAATGAATTTGCTAGG...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR GCA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTTCAAGCAAAACATTCTaGAAAGAGACCGCATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFSSKTF*KETALI Trigger: AATCAATGCGGTCTCTTTGCAGAATGTTTTGCTTGA...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAAGTCATTAGGCAATGGTaGGTTTCTAGCACCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EWKDTTSKACYRTCKIMKVIRQW*VSSTID Trigger: GTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR TCA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAAGATTTCACGGCTGCTTaGACCATTCGAATTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EWKDTTSKACYRTCKIMKDFTAA*TIRIWI Trigger: AATCCAAATTCGAATGGTTCAAGCAGCCGTGAAATC...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAAAGTAAATGCTATGACTaGTGGTATTTCTTAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EWKDTTSKACYRTCKIMKSKCYD*WYFLAW Trigger: CCAGGCTAAGAAATACCACCAGTCATAGCATTTACT...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | AGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTTCAACCTGGAGTTCCTaGTTCCTGCGCACCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSWELGRNDFKTAIGTYGSTWSS*FLRTSA Trigger: TGCGGAGGTGCGCAGGAACAAGGAACTCCAGGTTGA...ACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATAGCAACCTTCAGGAGTaGGGAGTTGGGGAGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: WELGRNDFKTAIGTYGGYSNLQE*GVGEKR Trigger: TCGTTTCTCCCCAACTCCCAACTCCTGAAGGTTGCT...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | GTCATTAGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTGCCATCTTGCTGAAGTaGTTGTTCTCCTCCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VIRQWWVSSTIDCLLTSFAILLK*LFSSKA Trigger: GGCTTTGGAGGAGAACAACAACTTCAGCAAGATGGC...AAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCTAATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | GAGTGGAAAGACACAACATCAAAAGCCTGTTACAGGACATGTAAGATTATGAAACAGGGGGATTTACTATaGGTGGGGCGTGCCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: EWKDTTSKACYRTCKIMKQGDLL*VGRARP Trigger: GGGTCTGGCACGCCCCACCAATAGTAAATCCCCCTG...TTTCATAATCTTACATGTCCTGTAACAGGCTTTTGATGTTGTGTCTTTCCACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGAGTGTTTTGTTGTaGGTGTTGTTAGTAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QELGVGEKRLQNCDRYLWWSVLL*VLLVGR Trigger: CCTGCCTACTAACAACACCAACAACAAAACACTCCA...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATTTCAGGAGTTGGGAGTaGGGGAGAAACGACTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: WELGRNDFKTAIGTYGGYFRSWE*GRNDFK Trigger: TTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTGAA...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGTGGGTATGTTTTGTTGTTGGTGTaGTTAGTAGGCAGGATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WELGRNDFKTAIGTYGGYVLLLV*LVGRIA Trigger: GGCAATCCTGCCTACTAACAACACCAACAACAAAAC...ATACCCACCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTTGGGAGTTGGGGAGAAACGACTTCAAAACTGCGATAGGTACTTATGGAGATGGAGTGTTTTGTaGTTGGTGTTGTTAGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QELGVGEKRLQNCDRYLWRWSVL*LVLLVG Trigger: GCCTACTAACAACACCAACAACAAAACACTCCATCT...CCATAAGTACCTATCGCAGTTTTGAAGTCGTTTCTCCCCAACTCCCAACTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTCGATTTCACGGCTGCTaGAACCATTCGAATTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFRFHGC*NHSNLD Trigger: ATCCAAATTCGAATGGTTCAAGCAGCCGTGAAATCG...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||
| CDS-3UTR CAA 90 bp | AGGCAATGGTGGGTTTCTAGCACCATAGACTGTCTACTGACCTCATTTTTCTTTGGCACGTTTGTTGATTaGCTTCACTTCCATATCATC | + |
|
Preference number: 5 (lower is better) Translates to: RQWWVSSTIDCLLTSFFFGTFVD*LHFHII Trigger: GATGATATGGAAGTGAAGCAAATCAACAAACGTGCC...AAAGAAAAATGAGGTCAGTAGACAGTCTATGGTGCTAGAAACCCACCATTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000220876.12 |
||