RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STKLD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198870

Ensembl transcript IDs: ENST00000371957.4, ENST00000462310.1, ENST00000468046.1, ENST00000475232.1, ENST00000477284.1, ENST00000626433.1, ENST00000627962.2, ENST00000628561.1, ENST00000630074.1, ENST00000631348.1

Found 335 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTCTGGAAGGACTGCTCTGTCCAGGGGCGAGGTCTATAGAGACTaGAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGA +
Preference number: 1 (lower is better)
Translates to: WSGRTALSRGEVYRD*RIKYPTGQSQPLAR
Trigger: TCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCCCCTGGACAGAGCAGTCCTTCCAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR TCA 90 bp TCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTaGCTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTC +
Preference number: 1 (lower is better)
Translates to: SVFVDSPRVQEQLLM*LNPAVMDRKLFGEV
Trigger: GACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATaGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTA +
Preference number: 1 (lower is better)
Translates to: PGSRSSYSCDSIQQS*TGNSLERSDYPSRL
Trigger: TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR CCA 90 bp AAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCAAGTCAGTTTTCGTaGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATC +
Preference number: 1 (lower is better)
Translates to: KKPVPGRRKQASQFS*TVPGSRSSYSCDSI
Trigger: GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGCTTCCTCCTTCCAGGAACTGGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR CCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTTGCTTCCCCACCCAGTaGGCTGGGAGAGGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPCFPTQ*AGRGGC
Trigger: GCAGCCACCTCTCCCAGCCCACTGGGTGGGGAAGCA...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR TCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACCCCCGCATCAGGGCTaGGCTGCTTCCCCACCCAGT +
Preference number: 2 (lower is better)
Translates to: IETAELSIPLASHSLLPEPPHQG*AASPPS
Trigger: ACTGGGTGGGGAAGCAGCTCAGCCCTGATGCGGGGG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR CCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTGGAGGGAGGGGCCTGTaGGGTATCTGTCTTCTCCCC +
Preference number: 2 (lower is better)
Translates to: TAELSIPLASHSLLPEMIGGRGL*GICLLP
Trigger: GGGGAGAAGACAGATACCCCACAGGCCCCTCCCTCC...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR TCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCTCTTTGGAGAGGTCTaGTTACCCCTCCCGTTTAAG +
Preference number: 2 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSILFGEV*LPLPFK
Trigger: CTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAG...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR TCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTGCAGGAGAGCAGTCTTaGAAACTATACACGTGGAGA +
Preference number: 2 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRAGEQS*KLYTWR
Trigger: TCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGC...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR TCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTGCAGGAGAGCAGTCTTaGAAACTATACACGTGGAGA +
Preference number: 2 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPAGEQS*KLYTWR
Trigger: TCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGC...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR TCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACACCTAAGAGGAGTGTaGGATGCGCATTCTGGTGCT +
Preference number: 2 (lower is better)
Translates to: IETAELSIPLASHSLLPEHLRGV*DAHSGA
Trigger: AGCACCAGAATGCGCATCTCACACTCCTCTTAGGTG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAGGACAGGAAACTCTTTaGAGAGGTCTGATTACCCCT +
Preference number: 2 (lower is better)
Translates to: IETAELSIPLASHSLLPEGQETL*RGLITP
Trigger: AGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCC...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR CCA 72 bp GTTCCTGGAAGGAGGAAGCAGGCAAGTCAGTTTTCGTaGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGT +
Preference number: 3 (lower is better)
Translates to: VPGRRKQASQFS*TVPGSRSSYSC
Trigger: ACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGCTTCCTCCTTCCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR GCA 72 bp AGGACTGCTCTGTCCAGGGGCGAGGTCTATAGAGACTaGAGAATTAAGTATCCCACTGGCCAGTCACAGCCT +
Preference number: 3 (lower is better)
Translates to: RTALSRGEVYRD*RIKYPTGQSQP
Trigger: AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCCCCTGGACAGAGCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR TCA 72 bp GTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTaGCTCAATCCAGCAGTCATGGACAGGAAACTCTTT +
Preference number: 3 (lower is better)
Translates to: VDSPRVQEQLLM*LNPAVMDRKLF
Trigger: AAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR CAA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGGCAGGAGAGCAGTCTaGAAAACTATACACGTGGAG +
Preference number: 3 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQGRRAV*KTIHVE
Trigger: CTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCC...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR CCA 72 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTaGAAGGAGGAAGCAGGCAAGTCAGTTTTCGTGGAC +
Preference number: 3 (lower is better)
Translates to: LKSTFSAQETSS*KEEAGKSVFVD
Trigger: GTCCACGAAAACTGACTTGCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR CAA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGGCAGGAGAGCAGTCTaGAAAACTATACACGTGGAG +
Preference number: 3 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRGRRAV*KTIHVE
Trigger: CTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR TCA 72 bp CCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTaGTTACCCCTCCCGTTTAAGATTGATTTTGGCCCA +
Preference number: 3 (lower is better)
Translates to: PAVMDRKLFGEV*LPLPFKIDFGP
Trigger: TGGGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR-3UTR CAA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAGGCAGAAACTGGCCTaGGGCCTCTTTATTAGTCAC +
Preference number: 3 (lower is better)
Translates to: TAELSIPLASHSLLPEMIRQKLA*GLFISH
Trigger: GTGACTAATAAAGAGGCCCAAGGCCAGTTTCTGCCT...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGCTCTCCGGGGGACCCTaGGCCTCGCTCCCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMLSGGP*ASLPLR
Trigger: ACGCAGGGGGAGCGAGGCCCAGGGTCCCCCGGAGAG...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGGCAGGCCCAGGCCGCTaGCGCAGACGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMAGPGR*RRRPCF
Trigger: AAAGCAGGGACGTCTGCGCCAGCGGCCTGGGCCTGC...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTGGGCCTCGCTCCCCCTaGGTGGGGCGCCTGCGATTG +
Preference number: 4 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRGPRSP*VGRLRL
Trigger: CAATCGCAGGCGCCCCACGCAGGGGGAGCGAGGCCC...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGGACGGCCTTCAGGCTaGCTGGGCTCTGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQGRPSG*LGSGGG
Trigger: CCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCC...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGCCTTGGCTTCCGGGTaGTGCACCAGCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGALASG*CTSAWP
Trigger: GGGCCAAGCGCTGGTGCACCACCCGGAAGCCAAGGC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGTGGTGCACCCCAGCTaGGGGCTTCCACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGVVHPS*GLPPGG
Trigger: CCCTCCAGGTGGAAGCCCCCAGCTGGGGTGCACCAC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCCCCCGCATCAGGGCTaGGCTGCTTCCCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTPPHQG*AASPPS
Trigger: ACTGGGTGGGGAAGCAGCTCAGCCCTGATGCGGGGG...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTGGACGGCCTTCAGGCTaGCTGGGCTCTGGCGGAGGG +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPGRPSG*LGSGGG
Trigger: CCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCC...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCGCCTCTTCATGGCCCTaGGCTGGACTTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGASSWP*AGLRAS
Trigger: GCTGGCCCGAAGTCCAGCTCAGGGCCATGAAGAGGC...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGGGAGGCCTGGTTTGCTaGAGGCGCTGCTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMGGLVC*RRCCHS
Trigger: TGAGTGACAGCAGCGCCTTCAGCAAACCAGGCCTCC...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTCCTGCGTGGGGCGCCTaGGATTGGACCCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRPAWGA*DWTLAQ
Trigger: TTGGGCCAGGGTCCAATCGCAGGCGCCCCACGCAGG...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGGGCCTCGCTCCCCCTaGGTGGGGCGCCTGCGATTG +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRGPRSP*VGRLRL
Trigger: CAATCGCAGGCGCCCCACGCAGGGGGAGCGAGGCCC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACCCCGCGTGGGTCAGTaGGACCCGCGGGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPEPRVGQ*DPRDPP
Trigger: GGGAGGATCCCGCGGGTCCCACTGACCCACGCGGGG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGACCCCGCGTGGGTCAGTaGGACCCGCGGGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRPRVGQ*DPRDPP
Trigger: GGGAGGATCCCGCGGGTCCCACTGACCCACGCGGGG...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTTCATGGCCCTGAGCTaGACTTCGGGCCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMFMALS*TSGQPE
Trigger: CTCTGGCTGGCCCGAAGTCCAGCTCAGGGCCATGAA...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTGGTGCACCAGCGCTTaGCCCAGGAGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTWCTSA*PRRCSS
Trigger: GCTGCTGCACCTCCTGGGCCAAGCGCTGGTGCACCA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTGCAGGCCCAGGCCGCTaGCGCAGACGTCCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPAGPGR*RRRPCF
Trigger: AAAGCAGGGACGTCTGCGCCAGCGGCCTGGGCCTGC...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGACCTGGAGGGAGGCCTaGTTTGCTGAAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMTWREA*FAEGAA
Trigger: AGCAGCGCCTTCAGCAAACCAGGCCTCCCTCCAGGT...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTCCTCGGGGTGGCTCTaGAGAGCACTCAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTSSGWL*RALSRV
Trigger: CACCCTGCTGAGTGCTCTTCAGAGCCACCCCGAGGA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGGAGGCCTGGTTTGCTaGAGGCGCTGCTGTCACTCA +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGGGLVC*RRCCHS
Trigger: TGAGTGACAGCAGCGCCTTCAGCAAACCAGGCCTCC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTGCCGCCCTCCTCCTaGACCACCACCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPLPPSS*TTTLKA
Trigger: GGCCTTCAAGGTGGTGGTGCAGGAGGAGGGCGGCAG...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTCTGCCGCCCTCCTCCTaGACCACCACCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRLPPSS*TTTLKA
Trigger: GGCCTTCAAGGTGGTGGTGCAGGAGGAGGGCGGCAG...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGGTGGACCAGCAGCATaGCCACGTTCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGGGPAA*PRSPPP
Trigger: AGGTGGTGGAGAACGTGGGCATGCTGCTGGTCCACC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACTCGCTCCCCCTGCGTaGGGCGCCTGCGATTGGACC +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPELAPPA*GACDWT
Trigger: GGTCCAATCGCAGGCGCCCCACGCAGGGGGAGCGAG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCCTGGTACTTCTCCATaGGCTCTCCGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIPGTSP*ALRGTL
Trigger: CAGGGTCCCCCGGAGAGCCCATGGAGAAGTACCAGG...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAGCGCGTCCAGCACCTaGCCCAGCACATTCTGCATC +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGSASST*PSTFCI
Trigger: GATGCAGAATGTGCTGGGCCAGGTGCTGGACGCGCT...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCGGAGGGAGGGGCCTGTaGGGTATCTGTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIGGRGL*GICLLP
Trigger: GGGGAGAAGACAGATACCCCACAGGCCCCTCCCTCC...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTACCCTGGCCCAAGCATaGTCAGTAGCGACCGCGTAC +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTTLAQA*SVATAY
Trigger: GTACGCGGTCGCTACTGATCATGCTTGGGCCAGGGT...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTCAGCAGGGTGGAGGTaGTGGCTTGGTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTSAGWR*WLGCRE
Trigger: CTCCCTGCAACCAAGCCATCACCTCCACCCTGCTGA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATCCCCCGCATCAGGGCTaGGCTGCTTCCCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNPPHQG*AASPPS
Trigger: ACTGGGTGGGGAAGCAGCTCAGCCCTGATGCGGGGG...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGCCTGCGTGGGGCGCCTaGGATTGGACCCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQPAWGA*DWTLAQ
Trigger: TTGGGCCAGGGTCCAATCGCAGGCGCCCCACGCAGG...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGAGGGACTTCCGCAGATaGATGGCTTCTGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMRDFRR*MASVPS
Trigger: GGATGGCACAGAAGCCATGCATCTGCGGAAGTCCCT...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTCCGCAGCTGGCTTCTaGCATTTCCCCATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTSAAGF*HFPIRR
Trigger: CCTGCGGATGGGGAAATGGCAGAAGCCAGCTGCGGA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCCTGGCACAGCCGGATaGTTTGCAGGAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPPGTAG*FAGAAP
Trigger: TGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGG...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGGTGGACCAGCAGCATaGCCACGTTCTCCACCACCT +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQGGPAA*PRSPPP
Trigger: AGGTGGTGGAGAACGTGGGCATGCTGCTGGTCCACC...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCCTCGCTCCCCCTGCGTaGGGCGCCTGCGATTGGACC +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILALAPPA*GACDWT
Trigger: GGTCCAATCGCAGGCGCCCCACGCAGGGGGAGCGAG...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCAGCGCGTCCAGCACCTaGCCCAGCACATTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGSASST*PSTFCI
Trigger: GATGCAGAATGTGCTGGGCCAGGTGCTGGACGCGCT...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGACCATGACAAGAAGTaGCTCCTCCTCGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGDHDKK*LLLGVA
Trigger: AGCCACCCCGAGGAGGAGCCACTTCTTGTCATGGTC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGAGCAGGGCTCTGTCCTaGCACAGCCGGATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQSRALS*HSRMLC
Trigger: GCAAAGCATCCGGCTGTGCCAGGACAGAGCCCTGCT...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGGTGGTGCACCCCAGCTaGGGGCTTCCACCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQVVHPS*GLPPGG
Trigger: CCCTCCAGGTGGAAGCCCCCAGCTGGGGTGCACCAC...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGAGGGCAGAAGATTCCTaGAGGTTTCCACATCCGGGA +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMRAEDS*RFPHPG
Trigger: TCCCGGATGTGGAAACCTTCAGGAATCTTCTGCCCT...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAGACGCACGAGGACTTaGAGGAGCCTCTCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGRRTRT*RSLSRR
Trigger: CCTTCTTGAGAGGCTCCTTCAAGTCCTCGTGCGTCT...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGGCCTCTTCATGGCCCTaGGCTGGACTTCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWASSWP*AGLRAS
Trigger: GCTGGCCCGAAGTCCAGCTCAGGGCCATGAAGAGGC...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAAACTGCTGCTCCTTaGTGCAGCCCAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIQTAAP*CSPAGT
Trigger: TGTCCCTGCTGGGCTGCATCAAGGAGCAGCAGTTTG...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCAGGGAGCTGTTGAGGTaGTCCAGGATGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGRELLR*SRMCSS
Trigger: GCTGGAGCACATCCTGGAGCACCTCAACAGCTCCCT...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTACCTGGTACTTCTCCATaGGCTCTCCGGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLPGTSP*ALRGTL
Trigger: CAGGGTCCCCCGGAGAGCCCATGGAGAAGTACCAGG...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTACCGCAGCTTCAGCAGTaGCATCAGCTCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLPQLQQ*HQLLQG
Trigger: GCCCTGGAGGAGCTGATGCCACTGCTGAAGCTGCGG...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGGCCTTCAGGCTGCCTaGGCTCTGGCGGAGGGACTT +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRGLQAA*ALAEGL
Trigger: AAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCGAGCAGGCACACAGCTaGACATCGAGGACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGEQAHS*TSRTLS
Trigger: TGACAGGGTCCTCGATGTCCAGCTGTGTGCCTGCTC...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAATGGTGCACCAGCGCTTaGCCCAGGAGGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPEWCTSA*PRRCSS
Trigger: GCTGCTGCACCTCCTGGGCCAAGCGCTGGTGCACCA...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAGCCTTGGCTTCCGGGTaGTGCACCAGCGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKAALASG*CTSAWP
Trigger: GGGCCAAGCGCTGGTGCACCACCCGGAAGCCAAGGC...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGGTTGCAGGGAGCCTTaGCTTCCGGGTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLGCREP*LPGGAP
Trigger: TGGTGCACCACCCGGAAGCCAAGGCTCCCTGCAACC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGTGGAGGTGATGGCTTaGTTGCAGGGAGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQVEVMA*LQGALA
Trigger: AGCCAAGGCTCCCTGCAACCAAGCCATCACCTCCAC...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGAGTGACTCTGACTCCTaGGTTGTGGTGATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMSDSDS*VVVMAS
Trigger: GCTAGCCATCACCACAACCCAGGAGTCAGAGTCACT...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGCGCTCCTTGATCTCCTaGAGCAGGGCCTTCATACTA +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMRSLIS*SRAFIL
Trigger: TAGTATGAAGGCCCTGCTCCAGGAGATCAAGGAGCG...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCGCAAGTCAGTTTTCGTaGACAGTCCCCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGASQFS*TVPGSR
Trigger: CCTGGACCCGGGGACTGTCCACGAAAACTGACTTGC...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTGCTTCCCCACCCAGTaGGCTGGGAGAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQCFPTQ*AGRGGC
Trigger: GCAGCCACCTCTCCCAGCCCACTGGGTGGGGAAGCA...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATTGCTTCCCCACCCAGTaGGCTGGGAGAGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNCFPTQ*AGRGGC
Trigger: GCAGCCACCTCTCCCAGCCCACTGGGTGGGGAAGCA...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGACACGGCAGACCTAGCTaGTCTGCAGGCATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGHGRPS*SAGIFR
Trigger: TCTGAAAATGCCTGCAGATCAGCTAGGTCTGCCGTG...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCAGGCTGTAGACCATaGCAAGAAGTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQAGCRP*QEVAPP
Trigger: AGGAGGAGCCACTTCTTGTCATGGTCTACAGCCTGC...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGCTCTTTGGAGAGGTCTaGTTACCCCTCCCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMLFGEV*LPLPFK
Trigger: CTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAG...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGCCTGGCACAGCCGGATaGTTTGCAGGAGCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQPGTAG*FAGAAP
Trigger: TGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGG...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGCTGGGAGAGGTGGCTaGCTCCAGCCTCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNAGRGG*LQPQEH
Trigger: GTGCTCTTGAGGCTGGAGGCAGCCACCTCTCCCAGC...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGAAGAGGAGTGTGAGATaGGCATTCTGGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMKRSVR*AFWCWM
Trigger: CATCCAGCACCAGAATGCGCATCTCACACTCCTCTT...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACCGCAGCTTCAGCAGTaGCATCAGCTCCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPEPQLQQ*HQLLQG
Trigger: GCCCTGGAGGAGCTGATGCCACTGCTGAAGCTGCGG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCAGGCTGCCTGGGCTCTaGCGGAGGGACTTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILARLPGL*RRDFRR
Trigger: TCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCT...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAAGGCTGCCTGGGCTCTaGCGGAGGGACTTCCGCAGA +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKARLPGL*RRDFRR
Trigger: TCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCT...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTCCGAGGGGTCGATCTaGAGCATCAAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTSEGSI*SIKGRR
Trigger: TCTTCTGCCCTTGATGCTCCAGATCGACCCCTCGGA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTGACCATGACAAGAAGTaGCTCCTCCTCGGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPDHDKK*LLLGVA
Trigger: AGCCACCCCGAGGAGGAGCCACTTCTTGTCATGGTC...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTGGGCCTTCATACTACTaGACACCAGCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRGPSYY*TPAPAG
Trigger: TCCTGCCGGAGCTGGTGTCCAGTAGTATGAAGGCCC...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGGGAGGGAGGGGCCTGTaGGGTATCTGTCTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWGGRGL*GICLLP
Trigger: GGGGAGAAGACAGATACCCCACAGGCCCCTCCCTCC...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGGAAACAGTGGCCCATaGAAAGGAAGGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGGNSGP*KGRTGR
Trigger: TCTCCCTGTCCTTCCTTTCCATGGGCCACTGTTTCC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGTAGCTCCATGGTCGTaGCCACCACCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRVAPWS*PPPPPA
Trigger: AGCTGGTGGAGGTGGTGGTCACGACCATGGAGCTAC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGGTAGCTCCATGGTCGTaGCCACCACCTCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWVAPWS*PPPPPA
Trigger: AGCTGGTGGAGGTGGTGGTCACGACCATGGAGCTAC...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGTCAGCAGGGTGGAGGTaGTGGCTTGGTTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWSAGWR*WLGCRE
Trigger: CTCCCTGCAACCAAGCCATCACCTCCACCCTGCTGA...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTGCAGGCTGTAGACCATaGCAAGAAGTGGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRAGCRP*QEVAPP
Trigger: AGGAGGAGCCACTTCTTGTCATGGTCTACAGCCTGC...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAACCTGCACCACCACCTTaGAGGCCGCCAGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQPAPPP*RPPALT
Trigger: TGTCAGAGCTGGCGGCCTTCAAGGTGGTGGTGCAGG...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGGCAGGAGAGCAGTCTTaGAAACTATACACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMAGEQS*KLYTWR
Trigger: TCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGC...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGCACCTAAGAGGAGTGTaGGATGCGCATTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQHLRGV*DAHSGA
Trigger: AGCACCAGAATGCGCATCTCACACTCCTCTTAGGTG...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGTGGAGGCTCAGTGTTaGCTCTCATCTAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGVEAQC*LSSRMV
Trigger: GACCATTCTAGATGAGAGTCAACACTGAGCCTCCAC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGACAGAGATGTGGGCGTaGCGCAGCTTCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQTEMWA*RSFSSG
Trigger: GCCACTGCTGAAGCTGCGGCACGCCCACATCTCTGT...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGGGAGCTGTTGAGGTaGTCCAGGATGTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLRELLR*SRMCSS
Trigger: GCTGGAGCACATCCTGGAGCACCTCAACAGCTCCCT...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGCACAGCCGGATGCTTTaGAGGAGCAGCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQHSRML*RSSATT
Trigger: AGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTG...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGACACAGCCGGATGCTTTaGAGGAGCAGCGCCACCACT +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRHSRML*RSSATT
Trigger: AGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTG...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGAGCTGGTACAAAACCTaGTACTTCTCCATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMSWYKT*YFSMGS
Trigger: AGAGCCCATGGAGAAGTACCAGGTTTTGTACCAGCT...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTATGGTACACAGAGATGTaGGCGTGCCGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLWYTEM*ACRSFS
Trigger: GCTGAAGCTGCGGCACGCCCACATCTCTGTGTACCA...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGAGCAGGCACACAGCTaGACATCGAGGACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLEQAHS*TSRTLS
Trigger: TGACAGGGTCCTCGATGTCCAGCTGTGTGCCTGCTC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAGGTTGCAGGGAGCCTTaGCTTCCGGGTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKAGCREP*LPGGAP
Trigger: TGGTGCACCACCCGGAAGCCAAGGCTCCCTGCAACC...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTAGAAGACTCCGCAGCTaGCTTCTGCCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTRRLRS*LLPFPH
Trigger: ATGGGGAAATGGCAGAAGCCAGCTGCGGAGTCTTCT...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAACACCTTCACCAGGCTaGCCAGTCCCCGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPETPSPG*PVPGRH
Trigger: ATGCCTACCGGGGACTGGCCAGCCTGGTGAAGGTGT...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGACCTGGAGGGAGGCCTaGTTTGCTGAAGGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWTWREA*FAEGAA
Trigger: AGCAGCGCCTTCAGCAAACCAGGCCTCCCTCCAGGT...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTGGAAACAGTGGCCCATaGAAAGGAAGGACAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTGNSGP*KGRTGR
Trigger: TCTCCCTGTCCTTCCTTTCCATGGGCCACTGTTTCC...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAACCCTGGCCCAAGCATaGTCAGTAGCGACCGCGTAC +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQTLAQA*SVATAY
Trigger: GTACGCGGTCGCTACTGATCATGCTTGGGCCAGGGT...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGACAAACTGCTGCTCCTTaGTGCAGCCCAGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRQTAAP*CSPAGT
Trigger: TGTCCCTGCTGGGCTGCATCAAGGAGCAGCAGTTTG...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCACCTAAGAGGAGTGTaGGATGCGCATTCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPHLRGV*DAHSGA
Trigger: AGCACCAGAATGCGCATCTCACACTCCTCTTAGGTG...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCGCCTCTTGCCAGAAATaGTTAAGGCAGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIASCQK*LRQKLA
Trigger: GGCCAGTTTCTGCCTTAATCATTTCTGGCAAGAGGC...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTACAGAGATGTGGGCGTaGCGCAGCTTCAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMITEMWA*RSFSSG
Trigger: GCCACTGCTGAAGCTGCGGCACGCCCACATCTCTGT...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGTTGGAACTCAGGTCCTaGAGTTTGCAGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQLELRS*SLQWSL
Trigger: CAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAA...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGAAATGCTGGCCACGTTaGCTTCTAACAGCATGTCGG +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQKCWPR*LLTACR
Trigger: CCGACATGCTGTTAGAAGGCAACGTGGCCAGCATTT...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCATCCGCAGCTGGCTTCTaGCATTTCCCCATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKASAAGF*HFPIRR
Trigger: CCTGCGGATGGGGAAATGGCAGAAGCCAGCTGCGGA...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTACTTGTTCAAACTGCTaGTCCTTGATGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTTCSNC*SLMQPS
Trigger: GCTGGGCTGCATCAAGGAGCAGCAGTTTGAACAAGT...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGACCACTTGTTCAAACTaGTGCTCCTTGATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQTTCSN*CSLMQP
Trigger: GGGCTGCATCAAGGAGCAGCAGTTTGAACAAGTGGT...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCGCCCCAGGATTCAGCTaGTACAAAACCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIAPGFS*YKTWYF
Trigger: GAAGTACCAGGTTTTGTACCAGCTGAATCCTGGGGC...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACCTCCAGGGCCTGACTaGCGTAATGGTCATCCATGC +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPEPPGPD*RNGHPC
Trigger: GCATGGATGACCATTACGCCAGTCAGGCCCTGGAGG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTGGATGATGTCCAAATaGTGCAGGTATTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTWMMSK*CRYSSA
Trigger: CGCGCTGGAATACCTGCACCATTTGGACATCATCCA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGGGTTTGAGATTCCTGTaGATGATGTCCAAATGGTGC +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMGLRFL*MMSKWC
Trigger: GCACCATTTGGACATCATCCACAGGAATCTCAAACC...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTATCCGAGGGGTCGATCTaGAGCATCAAGGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLSEGSI*SIKGRR
Trigger: TCTTCTGCCCTTGATGCTCCAGATCGACCCCTCGGA...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTTTCATGGCCCTGAGCTaGACTTCGGGCCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMIFMALS*TSGQPE
Trigger: CTCTGGCTGGCCCGAAGTCCAGCTCAGGGCCATGAA...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGGTGGAGGTGATGGCTTaGTTGCAGGGAGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWVEVMA*LQGALA
Trigger: AGCCAAGGCTCCCTGCAACCAAGCCATCACCTCCAC...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAAGCAGGGCTCTGTCCTaGCACAGCCGGATGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQSRALS*HSRMLC
Trigger: GCAAAGCATCCGGCTGTGCCAGGACAGAGCCCTGCT...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTACACCTTCACCAGGCTaGCCAGTCCCCGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMITPSPG*PVPGRH
Trigger: ATGCCTACCGGGGACTGGCCAGCCTGGTGAAGGTGT...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGCAAGAAACCAGTTCCTaGAAGGAGGAAGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQQETSS*KEEAGK
Trigger: CTTGCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTG...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGATCATCTAGAATGGTCTaGAAGGACTGCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGSSRMV*KDCSVQ
Trigger: CTGGACAGAGCAGTCCTTCCAGACCATTCTAGATGA...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACTAACAGCATGTCGGTaGTGGACGCAGGCACCATCT +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPELTACR*WTQAPS
Trigger: AGATGGTGCCTGCGTCCATCACCGACATGCTGTTAG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGACTAACAGCATGTCGGTaGTGGACGCAGGCACCATCT +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRLTACR*WTQAPS
Trigger: AGATGGTGCCTGCGTCCATCACCGACATGCTGTTAG...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGACAGAGAATTTCTGCATaGCCTCTAAAATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGQRISA*PLKCWP
Trigger: TGGCCAGCATTTTAGAGGTCATGCAGAAATTCTCTG...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTACACGGCAGACCTAGCTaGTCTGCAGGCATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLHGRPS*SAGIFR
Trigger: TCTGAAAATGCCTGCAGATCAGCTAGGTCTGCCGTG...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTGCCTCTTGCCAGAAATaGTTAAGGCAGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPASCQK*LRQKLA
Trigger: GGCCAGTTTCTGCCTTAATCATTTCTGGCAAGAGGC...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGCGTAATGGTCATCCATaGATTCCACCTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMRNGHP*IPPALS
Trigger: TGATAAAGCAGGTGGAATGCATGGATGACCATTACG...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTACTTGTTCAAACTGCTaGTCCTTGATGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPTCSNC*SLMQPS
Trigger: GCTGGGCTGCATCAAGGAGCAGCAGTTTGAACAAGT...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCCCTCCAGGGCCTGACTaGCGTAATGGTCATCCATGC +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILAPPGPD*RNGHPC
Trigger: GCATGGATGACCATTACGCCAGTCAGGCCCTGGAGG...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCTGGTACACAGAGATGTaGGCGTGCCGCAGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILAWYTEM*ACRSFS
Trigger: GCTGAAGCTGCGGCACGCCCACATCTCTGTGTACCA...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGTGATGAACAGCTCCTaGTACACAGAGATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLVMNSS*YTEMWA
Trigger: CGCCCACATCTCTGTGTACCAGGAGCTGTTCATCAC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTGGGCCTTCATACTACTaGACACCAGCTCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMIGPSYY*TPAPAG
Trigger: TCCTGCCGGAGCTGGTGTCCAGTAGTATGAAGGCCC...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGCGAGGTCTATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTGGCAGAAACTGGCCTTaGGCCTCTTTATTAGTCACC +
Preference number: 4 (lower is better)
Translates to: GEVYRDCRIKYPTGQSQPGRNWP*ASLLVT
Trigger: GGTGACTAATAAAGAGGCCCAAGGCCAGTTTCTGCC...AGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTATAGACCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCGATGTTTACTTGGAATaGAGCCTGTGGAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIDVYLE*SLWRLS
Trigger: ACTGAGCCTCCACAGGCTCCATTCCAAGTAAACATC...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTATGCAGATGTTTACTTaGAATGGAGCCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTMQMFT*NGACGG
Trigger: GCCTCCACAGGCTCCATTCCAAGTAAACATCTGCAT...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGATCCACTCAGAGTCAATaGTTTTCTTTGCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGSTQSQ*FSLPSS
Trigger: AGAGGAAGGCAAAGAAAATCATTGACTCTGAGTGGA...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAAGGGCAGAAGATTCCTaGAGGTTTCCACATCCGGGA +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPERAEDS*RFPHPG
Trigger: TCCCGGATGTGGAAACCTTCAGGAATCTTCTGCCCT...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAAGACGCACGAGGACTTaGAGGAGCCTCTCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKARRTRT*RSLSRR
Trigger: CCTTCTTGAGAGGCTCCTTCAAGTCCTCGTGCGTCT...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAAGGGACTTCCGCAGATaGATGGCTTCTGTGCCATCC +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQRDFRR*MASVPS
Trigger: GGATGGCACAGAAGCCATGCATCTGCGGAAGTCCCT...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGCTCAAGAAGGTGATGTaGACCACGTCCTTTATCGTT +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQLKKVM*TTSFIV
Trigger: AACGATAAAGGACGTGGTGCACATCACCTTCTTGAG...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAGCTGGGAGAGGTGGCTaGCTCCAGCCTCAAGAGCAC +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTAGRGG*LQPQEH
Trigger: GTGCTCTTGAGGCTGGAGGCAGCCACCTCTCCCAGC...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTATGGATGATGTCCAAATaGTGCAGGTATTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLWMMSK*CRYSSA
Trigger: CGCGCTGGAATACCTGCACCATTTGGACATCATCCA...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCTGTCATTAGCACATTaGAACTCAGGTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTLSLAH*NSGPAV
Trigger: AACTGCAGGACCTGAGTTCCAATGTGCTAATGACAG...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTCATCTAGAATGGTCTaGAAGGACTGCTCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRSSRMV*KDCSVQ
Trigger: CTGGACAGAGCAGTCCTTCCAGACCATTCTAGATGA...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
3UTR CAA 72 bp GCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTaGCCAGAAATGATTAAGGCAGAAACTGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AELSIPLASHSL*PEMIKAETGLG
Trigger: CCCAAGGCCAGTTTCTGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGACAGGGACCAGATGTCTaGTTTCTGGCTGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRQGPDV*FLAEGE
Trigger: TTCTCCTTCAGCCAGAAATCAGACATCTGGTCCCTG...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGAGCCTCTCAAGAAGGTaGTGTGCACCACGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWSLSRR*CAPRPL
Trigger: TAAAGGACGTGGTGCACATCACCTTCTTGAGAGGCT...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTTCCATGCATTCCACCTaGTTTATCACATGCTTGACT +
Preference number: 4 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTSMHST*FITCLT
Trigger: AGTCAAGCATGTGATAAAGCAGGTGGAATGCATGGA...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCTCCATGCATTCCACCTaGTTTATCACATGCTTGACT +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSISMHST*FITCLT
Trigger: AGTCAAGCATGTGATAAAGCAGGTGGAATGCATGGA...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTGGCCCAGCACATTCTaGATCCACTCAGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQWPSTF*IHSESM
Trigger: CATTGACTCTGAGTGGATGCAGAATGTGCTGGGCCA...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGATGATGTCCAAATGGTaGAGGTATTCCAGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQMMSKW*RYSSAS
Trigger: GGACGCGCTGGAATACCTGCACCATTTGGACATCAT...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGCTGGTACAAAACCTaGTACTTCTCCATGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLSWYKT*YFSMGS
Trigger: AGAGCCCATGGAGAAGTACCAGGTTTTGTACCAGCT...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGTGATGAACAGCTCCTaGTACACAGAGATGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQVMNSS*YTEMWA
Trigger: CGCCCACATCTCTGTGTACCAGGAGCTGTTCATCAC...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATCCTGCAGTTTGCAGTaGTCACTGCTGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRSCSLQ*SLLMRM
Trigger: CATCCTCATCAGCAGTGACCACTGCAAACTGCAGGA...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTCGCTCCTTGATCTCCTaGAGCAGGGCCTTCATACTA +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMIRSLIS*SRAFIL
Trigger: TAGTATGAAGGCCCTGCTCCAGGAGATCAAGGAGCG...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGGCAGAAACTGGCCTTaGGCCTCTTTATTAGTCACC +
Preference number: 4 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNGRNWP*ASLLVT
Trigger: GGTGACTAATAAAGAGGCCCAAGGCCAGTTTCTGCC...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTGGAATGGAGCCTGTaGAGGCTCAGTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQLEWSL*RLSVDS
Trigger: AGAGTCAACACTGAGCCTCCACAGGCTCCATTCCAA...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATTTGGAATGGAGCCTGTaGAGGCTCAGTGTTGACTCT +
Preference number: 4 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNLEWSL*RLSVDS
Trigger: AGAGTCAACACTGAGCCTCCACAGGCTCCATTCCAA...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAACAGGGACCAGATGTCTaGTTTCTGGCTGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQQGPDV*FLAEGE
Trigger: TTCTCCTTCAGCCAGAAATCAGACATCTGGTCCCTG...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCAGCCTCTCAAGAAGGTaGTGTGCACCACGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILASLSRR*CAPRPL
Trigger: TAAAGGACGTGGTGCACATCACCTTCTTGAGAGGCT...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGCAGGAGAGCAGTCTTaGAAACTATACACGTGGAGA +
Preference number: 4 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNAGEQS*KLYTWR
Trigger: TCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGC...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGGAGCAGTTACTCATGTaGCTCAATCCAGCAGTCATG +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQEQLLM*LNPAVM
Trigger: CATGACTGCTGGATTGAGTCACATGAGTAACTGCTC...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGAGCAGTTACTCATGTaGCTCAATCCAGCAGTCATG +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLREQLLM*LNPAVM
Trigger: CATGACTGCTGGATTGAGTCACATGAGTAACTGCTC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTGTGGAGGCTCAGTGTTaGCTCTCATCTAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMIVEAQC*LSSRMV
Trigger: GACCATTCTAGATGAGAGTCAACACTGAGCCTCCAC...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAATTGGAACTCAGGTCCTaGAGTTTGCAGTGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQLELRS*SLQWSL
Trigger: CAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAA...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAACCACTTGTTCAAACTaGTGCTCCTTGATGCAGCCC +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKATTCSN*CSLMQP
Trigger: GGGCTGCATCAAGGAGCAGCAGTTTGAACAAGTGGT...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCGAGGTCTATAGAGACTaGAGAATTAAGTATCCCACT +
Preference number: 4 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGEVYRD*RIKYPT
Trigger: AGTGGGATACTTAATTCTGCAGTCTCTATAGACCTC...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCGAGGTCTATAGAGACTaGAGAATTAAGTATCCCACT +
Preference number: 4 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIEVYRD*RIKYPT
Trigger: AGTGGGATACTTAATTCTGCAGTCTCTATAGACCTC...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAGCCCCAGGATTCAGCTaGTACAAAACCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKAAPGFS*YKTWYF
Trigger: GAAGTACCAGGTTTTGTACCAGCTGAATCCTGGGGC...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAATCCTGCAGTTTGCAGTaGTCACTGCTGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: GIIGRQESSLENYTRGDQSCSLQ*SLLMRM
Trigger: CATCCTCATCAGCAGTGACCACTGCAAACTGCAGGA...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGGACAGGAAACTCTTTaGAGAGGTCTGATTACCCCT +
Preference number: 4 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRGQETL*RGLITP
Trigger: AGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAGCAAGTCAGTTTTCGTaGACAGTCCCCGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTASQFS*TVPGSR
Trigger: CCTGGACCCGGGGACTGTCCACGAAAACTGACTTGC...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTCAAGAAACCAGTTCCTaGAAGGAGGAAGCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMIQETSS*KEEAGK
Trigger: CTTGCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTG...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAGATGTTTACTTGGAATaGAGCCTGTGGAGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPEDVYLE*SLWRLS
Trigger: ACTGAGCCTCCACAGGCTCCATTCCAAGTAAACATC...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGATGCAGATGTTTACTTaGAATGGAGCCTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQMQMFT*NGACGG
Trigger: GCCTCCACAGGCTCCATTCCAAGTAAACATCTGCAT...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCTCCTCAATGACCTCCTaGAAGCTGAGCTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILASSMTS*KLSSLN
Trigger: GTTCAATGAGCTCAGCTTCCAGGAGGTCATTGAGGA...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGGGTTTGAGATTCCTGTaGATGATGTCCAAATGGTGC +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQGLRFL*MMSKWC
Trigger: GCACCATTTGGACATCATCCACAGGAATCTCAAACC...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGCACGAATATTCCATTTaGCTTTGTCTGTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQHEYSI*LCLSLA
Trigger: TGCTAATGACAGACAAAGCCAAATGGAATATTCGTG...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCACAGAGAATTTCTGCATaGCCTCTAAAATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKAQRISA*PLKCWP
Trigger: TGGCCAGCATTTTAGAGGTCATGCAGAAATTCTCTG...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCACTGTCATTAGCACATTaGAACTCAGGTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ELSIPLASHSLLPEMIKALSLAH*NSGPAV
Trigger: AACTGCAGGACCTGAGTTCCAATGTGCTAATGACAG...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAAGTGACTCTGACTCCTaGGTTGTGGTGATGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTSDSDS*VVVMAS
Trigger: GCTAGCCATCACCACAACCCAGGAGTCAGAGTCACT...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAAGAAGACTCCGCAGCTaGCTTCTGCCATTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTRRLRS*LLPFPH
Trigger: ATGGGGAAATGGCAGAAGCCAGCTGCGGAGTCTTCT...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAGCTTTATCACATGCTTaGCTTTGGTTTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPEALSHA*LWFPFP
Trigger: AGGAAATGGAAACCAAAGTCAAGCATGTGATAAAGC...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACACTCTTTGGAGAGGTCTaGTTACCCCTCCCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTLFGEV*LPLPFK
Trigger: CTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAG...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCCGTAATGGTCATCCATaGATTCCACCTGCTTTATCA +
Preference number: 4 (lower is better)
Translates to: GNSLERSDYPSRLRLILARNGHP*IPPALS
Trigger: TGATAAAGCAGGTGGAATGCATGGATGACCATTACG...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAATGATGTCCAAATGGTaGAGGTATTCCAGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTMMSKW*RYSSAS
Trigger: GGACGCGCTGGAATACCTGCACCATTTGGACATCAT...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAAAATGCTGGCCACGTTaGCTTCTAACAGCATGTCGG +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTKCWPR*LLTACR
Trigger: CCGACATGCTGTTAGAAGGCAACGTGGCCAGCATTT...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAAAGAGGAGTGTGAGATaGGCATTCTGGTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTKRSVR*AFWCWM
Trigger: CATCCAGCACCAGAATGCGCATCTCACACTCCTCTT...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR TCA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTGCTTTATCACATGCTTaGCTTTGGTTTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: TAELSIPLASHSLLPEMIALSHA*LWFPFP
Trigger: AGGAAATGGAAACCAAAGTCAAGCATGTGATAAAGC...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR GCA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAACCTGCTTTATCACATaGTTGACTTTGGTTTCCATT +
Preference number: 4 (lower is better)
Translates to: IETAELSIPLASHSLLPETCFIT*LTLVSI
Trigger: AATGGAAACCAAAGTCAAGCATGTGATAAAGCAGGT...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACATCCTCAATGACCTCCTaGAAGCTGAGCTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTSSMTS*KLSSLN
Trigger: GTTCAATGAGCTCAGCTTCCAGGAGGTCATTGAGGA...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGCACGAATATTCCATTTaGCTTTGTCTGTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: IGRQESSLENYTRGDQGQHEYSI*LCLSLA
Trigger: TGCTAATGACAGACAAAGCCAAATGGAATATTCGTG...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CCA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAGGACAGGAAACTCTTTaGAGAGGTCTGATTACCCCT +
Preference number: 4 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTGQETL*RGLITP
Trigger: AGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCC...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 90 bp GCTCCTCCTCGGGGTGGCTCTGAAGAGCACTCAGCAGGGTGGAGGTaGTGGCTTGGTTGCAGGGAGCCTTGGCTTCCGGGTGGTGCACCA +
Preference number: 5 (lower is better)
Translates to: APPRGGSEEHSAGWR*WLGCREPWLPGGAP
Trigger: TGGTGCACCACCCGGAAGCCAAGGCTCCCTGCAACCAAGCCATCACCTCCACCCTGCTGAGTGCTCTTCAGAGCCACCCCGAGGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp GCTCCGGCAGGATCTCCTCATAGGAAGCCAGGTGGACCAGCAGCATaGCCACGTTCTCCACCACCTCCGGGTCGTCCCTGTGGAGCTGGT +
Preference number: 5 (lower is better)
Translates to: APAGSPHRKPGGPAA*PRSPPPPGRPCGAG
Trigger: ACCAGCTCCACAGGGACGACCCGGAGGTGGTGGAGAACGTGGGCATGCTGCTGGTCCACCTGGCTTCCTATGAGGAGATCCTGCCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp AGACGTGGTGCACCCCAGCTGGGGGCTTCCACCTGGAGGGAGGCCTaGTTTGCTGAAGGCGCTGCTGTCACTCACCAGGCTGGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: RRGAPQLGASTWREA*FAEGAAVTHQAGGE
Trigger: TTCACCTCCAGCCTGGTGAGTGACAGCAGCGCCTTCAGCAAACCAGGCCTCCCTCCAGGTGGAAGCCCCCAGCTGGGGTGCACCACGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 90 bp CACACAGCTGGACATCGAGGACCCTGTCATGTAGCTCCATGGTCGTaGCCACCACCTCCACCAGCTCCGGGGGCCACGGCAGACCTAGCT +
Preference number: 5 (lower is better)
Translates to: HTAGHRGPCHVAPWS*PPPPPAPGATADLA
Trigger: AGCTAGGTCTGCCGTGGCCCCCGGAGCTGGTGGAGGTGGTGGTCACGACCATGGAGCTACATGACAGGGTCCTCGATGTCCAGCTGTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp GCAGCCCAGCAGGGACAGCAGCCAGAAGACTCCGCAGCTGGCTTCTaGCATTTCCCCATCCGCAGGGTAGGTGGCCAACACCTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: AAQQGQQPEDSAAGF*HFPIRRVGGQHLAD
Trigger: ATCAGCCAGGTGTTGGCCACCTACCCTGCGGATGGGGAAATGGCAGAAGCCAGCTGCGGAGTCTTCTGGCTGCTGTCCCTGCTGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp CCGGGATCTGCTTCTCCTCCATTGTCTTCAGGACGGCCTTCAGGCTaGCTGGGCTCTGGCGGAGGGACTTCCGCAGATGCATGGCTTCTG +
Preference number: 5 (lower is better)
Translates to: PGSASPPLSSGRPSG*LGSGGGTSADAWLL
Trigger: CAGAAGCCATGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCCTGAAGACAATGGAGGAGAAGCAGATCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS-3UTR CAA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGGTGGTGCACCAGCGCTaGGCCCAGGAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMVVHQR*AQEVQQ
Trigger: CTGCTGCACCTCCTGGGCCAAGCGCTGGTGCACCAC...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp GATCTGCTTCTCCTCCATTGTCTTCAGGACGGCCTTCAGGCTGCCTaGGCTCTGGCGGAGGGACTTCCGCAGATGCATGGCTTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: DLLLLHCLQDGLQAA*ALAEGLPQMHGFCA
Trigger: GGCACAGAAGCCATGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCCTGAAGACAATGGAGGAGAAGCAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS CCA 90 bp TTCTCCTCCATTGTCTTCAGGACGGCCTTCAGGCTGCCTGGGCTCTaGCGGAGGGACTTCCGCAGATGCATGGCTTCTGTGCCCTCCACA +
Preference number: 5 (lower is better)
Translates to: FSSIVFRTAFRLPGL*RRDFRRCMASVPST
Trigger: TGTGGAGGGCACAGAAGCCATGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCCTGAAGACAATGGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS CCA 90 bp ATCTCCCCATTCCACGTGATGAACAGCTCCTGGTACACAGAGATGTaGGCGTGCCGCAGCTTCAGCAGTGGCATCAGCTCCTCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: ISPFHVMNSSWYTEM*ACRSFSSGISSSRA
Trigger: GGCCCTGGAGGAGCTGATGCCACTGCTGAAGCTGCGGCACGCCCACATCTCTGTGTACCAGGAGCTGTTCATCACGTGGAATGGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp CTGCTGTCACTCACCAGGCTGGAGGTGAAGCGCTCCTTGATCTCCTaGAGCAGGGCCTTCATACTACTGGACACCAGCTCCGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: LLSLTRLEVKRSLIS*SRAFILLDTSSGRI
Trigger: GATCCTGCCGGAGCTGGTGTCCAGTAGTATGAAGGCCCTGCTCCAGGAGATCAAGGAGCGCTTCACCTCCAGCCTGGTGAGTGACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCGTGGTGCACCAGCGCTaGGCCCAGGAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIVVHQR*AQEVQQ
Trigger: CTGCTGCACCTCCTGGGCCAAGCGCTGGTGCACCAC...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp ACGTTGCCTTCTAACAGCATGTCGGTGATGGACGCAGGCACCATCTaGCGGTGCAGGGTCAGAGAGACGCACGAGGACTTGAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: TLPSNSMSVMDAGTI*RCRVRETHEDLKEP
Trigger: AGGCTCCTTCAAGTCCTCGTGCGTCTCTCTGACCCTGCACCGGCAGATGGTGCCTGCGTCCATCACCGACATGCTGTTAGAAGGCAACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp GGTAGGCATTGTTCACCAGCAGGGCTCTGTCCTGGCACAGCCGGATaGTTTGCAGGAGCAGCGCCACCACTTGTTCAAACTGCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: GRHCSPAGLCPGTAG*FAGAAPPLVQTAAP
Trigger: AGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGGACAGAGCCCTGCTGGTGAACAATGCCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp GCATTGTTCACCAGCAGGGCTCTGTCCTGGCACAGCCGGATGCTTTaGAGGAGCAGCGCCACCACTTGTTCAAACTGCTGCTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: ALFTSRALSWHSRML*RSSATTCSNCCSLM
Trigger: CATCAAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGGACAGAGCCCTGCTGGTGAACAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp TGCTCACTCCACCGTACATTCGGGATTACTCGCCGCAGCACGGTTTaGGAGAGCCAGAACTGGGCAAAGCCCAGCTGTGCAGGGATAATC +
Preference number: 5 (lower is better)
Translates to: CSLHRTFGITRRSTV*ESQNWAKPSCAGII
Trigger: GATTATCCCTGCACAGCTGGGCTTTGCCCAGTTCTGGCTCTCCCAAACCGTGCTGCGGCGAGTAATCCCGAATGTACGGTGGAGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS-3UTR CAA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGTGGGGCGCCTGCGATaGGACCCTGGCCCAAGCATG +
Preference number: 5 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLVGRLR*DPGPSM
Trigger: CATGCTTGGGCCAGGGTCCAATCGCAGGCGCCCCAC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTGCACAGCCGGATGCTTaGCAGGAGCAGCGCCACCAC +
Preference number: 5 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRAQPDA*QEQRHH
Trigger: GTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGC...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCTCCTGCACCACCACCTaGAAGGCCGCCAGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGSCTTT*KAASSD
Trigger: GTCAGAGCTGGCGGCCTTCAAGGTGGTGGTGCAGGA...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGTCCTGCACCACCACCTaGAAGGCCGCCAGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQSCTTT*KAASSD
Trigger: GTCAGAGCTGGCGGCCTTCAAGGTGGTGGTGCAGGA...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTGAGGTGAAGCGCTCCTaGATCTCCTGGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTEVKRS*ISWSRA
Trigger: GGCCCTGCTCCAGGAGATCAAGGAGCGCTTCACCTC...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTGGAGGGAGGCCTGGTTaGCTGAAGGCGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: QVSFRGQSPGPGAVTHVTGGRPG*LKALLS
Trigger: TGACAGCAGCGCCTTCAGCAAACCAGGCCTCCCTCC...AGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 90 bp TTAACTGTGGGGAGGAAGAGGCCCCAATCAGCGGGAGCTTTGTGTTaGTCTGGAGCCACTGAAGCTGTCCATCTTGGTGGGTGCCCACCA +
Preference number: 5 (lower is better)
Translates to: LTVGRKRPQSAGALC*SGATEAVHLGGCPP
Trigger: TGGTGGGCACCCACCAAGATGGACAGCTTCAGTGGCTCCAGATCAACACAAAGCTCCCGCTGATTGGGGCCTCTTCCTCCCCACAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462310.1
ENST00000626433.1
CDS CCA 90 bp AAGCTGTCCATCTTGGTGGGTGCCCACCAGGCTGGCCCATATAGGTaGTGTGTCTGTGTGCCCTGGATGGCTGTAGAAGGAGTTGGAAGA +
Preference number: 5 (lower is better)
Translates to: KLSILVGAHQAGPYR*CVCVPWMAVEGVGR
Trigger: TCTTCCAACTCCTTCTACAGCCATCCAGGGCACACAGACACACCACCTATATGGGCCAGCCTGGTGGGCACCCACCAAGATGGACAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462310.1
ENST00000626433.1
CDS CCA 90 bp ACATTCGGGATTACTCGCCGCAGCACGGTTTGGGAGAGCCAGAACTaGGCAAAGCCCAGCTGTGCAGGGATAATCAGGGCATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: TFGITRRSTVWESQN*AKPSCAGIIRASVM
Trigger: CATCACAGATGCCCTGATTATCCCTGCACAGCTGGGCTTTGCCCAGTTCTGGCTCTCCCAAACCGTGCTGCGGCGAGTAATCCCGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS GCA 90 bp AGCATCAAGGGCAGAAGATTCCTGAAGGTTTCCACATCCGGGATCTaGTTCTCCTCCATTGTCTTCAGGACGGCCTTCAGGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SIKGRRFLKVSTSGI*FSSIVFRTAFRLPG
Trigger: CCCAGGCAGCCTGAAGGCCGTCCTGAAGACAATGGAGGAGAAGCAGATCCCGGATGTGGAAACCTTCAGGAATCTTCTGCCCTTGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS CCA 90 bp AGGTACAGAGAAGAGATCTCCCCATTCCACGTGATGAACAGCTCCTaGTACACAGAGATGTGGGCGTGCCGCAGCTTCAGCAGTGGCATC +
Preference number: 5 (lower is better)
Translates to: RYREEISPFHVMNSS*YTEMWACRSFSSGI
Trigger: GATGCCACTGCTGAAGCTGCGGCACGCCCACATCTCTGTGTACCAGGAGCTGTTCATCACGTGGAATGGGGAGATCTCTTCTCTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCGTGGGGCGCCTGCGATaGGACCCTGGCCCAAGCATG +
Preference number: 5 (lower is better)
Translates to: GNSLERSDYPSRLRLILAVGRLR*DPGPSM
Trigger: CATGCTTGGGCCAGGGTCCAATCGCAGGCGCCCCAC...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGGAAGCTGAGCTCATaGAACTCCATCACCAGGCAG +
Preference number: 5 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMWKLSS*NSITRQ
Trigger: CTGCCTGGTGATGGAGTTCAATGAGCTCAGCTTCCA...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCTGGCTGAAGGAGAAGTaGAGGGCTTCAGGGGCCATC +
Preference number: 5 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGWLKEK*RASGAI
Trigger: GATGGCCCCTGAAGCCCTCAACTTCTCCTTCAGCCA...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTCTGCTTCTCCTCCATaGTCTTCAGGACGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMSASPP*SSGRPS
Trigger: TGAAGGCCGTCCTGAAGACAATGGAGGAGAAGCAGA...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAGAGACGCACGAGGACTaGAAGGAGCCTCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGETHED*KEPLKK
Trigger: CTTCTTGAGAGGCTCCTTCAAGTCCTCGTGCGTCTC...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTGGTTGCAGGGAGCCTaGGCTTCCGGGTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: IGRQESSLENYTRGDQGQWLQGA*ASGWCT
Trigger: GGTGCACCACCCGGAAGCCAAGGCTCCCTGCAACCA...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGGTGGAGGTGATGGCTaGGTTGCAGGGAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLGGGDG*VAGSLG
Trigger: GCCAAGGCTCCCTGCAACCAAGCCATCACCTCCACC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCTTTCGAGGGAGCTGTaGAGGTGCTCCAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSILSREL*RCSRMC
Trigger: GCACATCCTGGAGCACCTCAACAGCTCCCTCGAAAG...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp GTACATGCCTGTACCCCAGCACTTTGGAGGCCGAGGTGGGACGATTaGTTGAGCCCAGAAATTCAGACTAGCCTGGGCAAAATGGTGAGA +
Preference number: 5 (lower is better)
Translates to: VHACTPALWRPRWDD*LSPEIQTSLGKMVR
Trigger: TCTCACCATTTTGCCCAGGCTAGTCTGAATTTCTGGGCTCAAGCAATCGTCCCACCTCGGCCTCCAAAGTGCTGGGGTACAGGCATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475232.1
ENST00000628561.1
CDS-3UTR CAA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCATGGTTGCAGGGAGCCTaGGCTTCCGGGTGGTGCACC +
Preference number: 5 (lower is better)
Translates to: ELSIPLASHSLLPEMIKAWLQGA*ASGWCT
Trigger: GGTGCACCACCCGGAAGCCAAGGCTCCCTGCAACCA...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGGTGGAGGTGATGGCTaGGTTGCAGGGAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNGGGDG*VAGSLG
Trigger: GCCAAGGCTCCCTGCAACCAAGCCATCACCTCCACC...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCGCACAGCCGGATGCTTaGCAGGAGCAGCGCCACCAC +
Preference number: 5 (lower is better)
Translates to: GNSLERSDYPSRLRLILAAQPDA*QEQRHH
Trigger: GTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGC...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGGAGGGAGGCCTGGTTaGCTGAAGGCGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNGGRPG*LKALLS
Trigger: TGACAGCAGCGCCTTCAGCAAACCAGGCCTCCCTCC...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp AGCAGCTTGAAACACAAGCCCTGCAGGTCCTCTTCTCAGAAGAGGTaGAGAATATTAACTGTGGGGAGGAAGAGGCCCCAATCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: SSLKHKPCRSSSQKR*RILTVGRKRPQSAG
Trigger: TCCCGCTGATTGGGGCCTCTTCCTCCCCACAGTTAATATTCTCCACCTCTTCTGAGAAGAGGACCTGCAGGGCTTGTGTTTCAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000462310.1
ENST00000626433.1
CDS-3UTR CAA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAAAATGCTGGCCACGTaGCCTTCTAACAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGKMLAT*PSNSMS
Trigger: CGACATGCTGTTAGAAGGCAACGTGGCCAGCATTTT...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCGAGGTGAAGCGCTCCTaGATCTCCTGGAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GNSLERSDYPSRLRLILAEVKRS*ISWSRA
Trigger: GGCCCTGCTCCAGGAGATCAAGGAGCGCTTCACCTC...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAGGCAGAAACTGGCCTaGGGCCTCTTTATTAGTCAC +
Preference number: 5 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGRQKLA*GLFISH
Trigger: GTGACTAATAAAGAGGCCCAAGGCCAGTTTCTGCCT...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 90 bp TTCGATCCGAGGGGTCGATCTGGAGCATCAAGGGCAGAAGATTCCTaGAGGTTTCCACATCCGGGATCTGCTTCTCCTCCATTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FDPRGRSGASRAEDS*RFPHPGSASPPLSS
Trigger: TGAAGACAATGGAGGAGAAGCAGATCCCGGATGTGGAAACCTTCAGGAATCTTCTGCCCTTGATGCTCCAGATCGACCCCTCGGATCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS CCA 90 bp ATGTGCACCACGTCCTTTATCGTTATTCGATCCGAGGGGTCGATCTaGAGCATCAAGGGCAGAAGATTCCTGAAGGTTTCCACATCCGGG +
Preference number: 5 (lower is better)
Translates to: MCTTSFIVIRSEGSI*SIKGRRFLKVSTSG
Trigger: CCCGGATGTGGAAACCTTCAGGAATCTTCTGCCCTTGATGCTCCAGATCGACCCCTCGGATCGAATAACGATAAAGGACGTGGTGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGATCTGTCATTAGCACATaGGAACTCAGGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGSVIST*ELRSCS
Trigger: ACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGA...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGAGACGCACGAGGACTaGAAGGAGCCTCTCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLETHED*KEPLKK
Trigger: CTTCTTGAGAGGCTCCTTCAAGTCCTCGTGCGTCTC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ATAGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAACTTTCGAGGGAGCTGTaGAGGTGCTCCAGGATGTGC +
Preference number: 5 (lower is better)
Translates to: IETAELSIPLASHSLLPELSREL*RCSRMC
Trigger: GCACATCCTGGAGCACCTCAACAGCTCCCTCGAAAG...TTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ATCCAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTCTCCAAGGGGGCCTaGTTCACAATGATACCGTCC +
Preference number: 5 (lower is better)
Translates to: IQQSWTGNSLERSDYPSRFSKGA*FTMIPS
Trigger: GGACGGTATCATTGTGAACAAGGCCCCCTTGGAGAA...ACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GCCTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCCAGTCACAGCCTCTaGCCAGAAATGATTAAGGCA +
Preference number: 5 (lower is better)
Translates to: ASRALFPRKKPVPGRRKQASHSL*PEMIKA
Trigger: TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGC...CTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCGCCAGTCACAGCCTCTaGCCAGAAATGATTAAGGCA +
Preference number: 5 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGASHSL*PEMIKA
Trigger: TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGC...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAATGCAGATGTTTACTaGGAATGGAGCCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: PGSRSSYSCDSIQQSWTGNADVY*EWSLWR
Trigger: CCTCCACAGGCTCCATTCCAAGTAAACATCTGCATT...TCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCCTGGACCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 90 bp GCCCAGCTGTGCAGGGATAATCAGGGCATCTGTGATGGAGTTCTTTaGGGCGTTACAAAGCCAACTAGCTGTGCTTGTATTAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: AQLCRDNQGICDGVL*GVTKPTSCACIRVE
Trigger: CTCCACCCTAATACAAGCACAGCTAGTTGGCTTTGTAACGCCTCAAAGAACTCCATCACAGATGCCCTGATTATCCCTGCACAGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS-3UTR CAA 90 bp CTCAAGAGCACTTTTTCCGCGCAAGAAACCAGTTCCTGGAAGGAGGAAGCAGGCTCTGTCATTAGCACATaGGAACTCAGGTCCTGCAGT +
Preference number: 5 (lower is better)
Translates to: LKSTFSAQETSSWKEEAGSVIST*ELRSCS
Trigger: ACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGA...GCCTGCTTCCTCCTTCCAGGAACTGGTTTCTTGCGCGGAAAAAGTGCTCTTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTTGGCTGAAGGAGAAGTaGAGGGCTTCAGGGGCCATC +
Preference number: 5 (lower is better)
Translates to: TAELSIPLASHSLLPEMIWLKEK*RASGAI
Trigger: GATGGCCCCTGAAGCCCTCAACTTCTCCTTCAGCCA...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGAGAGCAGCGCCACCACTaGTTCAAACTGCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: QSWTGNSLERSDYPSRLREQRHH*FKLLLL
Trigger: AAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTC...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp TGGATGATGTCCAAATGGTGCAGGTATTCCAGCGCGTCCAGCACCTaGCCCAGCACATTCTGCATCCACTCAGAGTCAATGATTTTCTTT +
Preference number: 5 (lower is better)
Translates to: WMMSKWCRYSSASST*PSTFCIHSESMIFF
Trigger: AAAGAAAATCATTGACTCTGAGTGGATGCAGAATGTGCTGGGCCAGGTGCTGGACGCGCTGGAATACCTGCACCATTTGGACATCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GCAGGCAAGTCAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGCTTTATCACATGCTaGACTTTGGTTTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: AGKSVFVDSPRVQEQLLMCFITC*TLVSIS
Trigger: GGAAATGGAAACCAAAGTCAAGCATGTGATAAAGCA...CATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTGACTTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGAGCAGTTACTCATGTGACTCAATCCAGCAGTCATGGACAGGAAACTCTTTGGTCTGCTTCTCCTCCATaGTCTTCAGGACGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: GAVTHVTQSSSHGQETLWSASPP*SSGRPS
Trigger: TGAAGGCCGTCCTGAAGACAATGGAGGAGAAGCAGA...CCAAAGAGTTTCCTGTCCATGACTGCTGGATTGAGTCACATGAGTAACTGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATTTCTCCAAGGGGGCCTaGTTCACAATGATACCGTCC +
Preference number: 5 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNFSKGA*FTMIPS
Trigger: GGACGGTATCATTGTGAACAAGGCCCCCTTGGAGAA...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTGAGCAGCGCCACCACTaGTTCAAACTGCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: TAELSIPLASHSLLPEMIEQRHH*FKLLLL
Trigger: AAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTC...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGGGCAGGAGAGCAGTCTaGAAAACTATACACGTGGAG +
Preference number: 5 (lower is better)
Translates to: IGRQESSLENYTRGDQGQGRRAV*KTIHVE
Trigger: CTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCC...CTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 90 bp TTCCATTTGGCTTTGTCTGTCATTAGCACATTGGAACTCAGGTCCTaGAGTTTGCAGTGGTCACTGCTGATGAGGATGATGTTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: FHLALSVISTLELRS*SLQWSLLMRMMLEG
Trigger: ACCCTCCAACATCATCCTCATCAGCAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp TTGTCTGTCATTAGCACATTGGAACTCAGGTCCTGCAGTTTGCAGTaGTCACTGCTGATGAGGATGATGTTGGAGGGTTTGAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: LSVISTLELRSCSLQ*SLLMRMMLEGLRFL
Trigger: CAGGAATCTCAAACCCTCCAACATCATCCTCATCAGCAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 90 bp TCCAGGACTTACGAAAGGGGTCTTCCTCCGCACGAATATTCCATTTaGCTTTGTCTGTCATTAGCACATTGGAACTCAGGTCCTGCAGTT +
Preference number: 5 (lower is better)
Translates to: SRTYERGLPPHEYSI*LCLSLAHWNSGPAV
Trigger: AACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGAAGACCCCTTTCGTAAGTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGACTGATGAGGATGATGTaGGAGGGTTTGAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: QSWTGNSLERSDYPSRLRLMRMM*EGLRFL
Trigger: CAGGAATCTCAAACCCTCCAACATCATCCTCATCAG...TCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp ACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAAATGCTGGCCACGTaGCCTTCTAACAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: TAELSIPLASHSLLPEMIKMLAT*PSNSMS
Trigger: CGACATGCTGTTAGAAGGCAACGTGGCCAGCATTTT...AATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGCAGGAGAGCAGTCTaGAAAACTATACACGTGGAG +
Preference number: 5 (lower is better)
Translates to: GIIGRQESSLENYTRGDQGRRAV*KTIHVE
Trigger: CTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCC...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCAGGCAGAAACTGGCCTaGGGCCTCTTTATTAGTCAC +
Preference number: 5 (lower is better)
Translates to: GNSLERSDYPSRLRLILARQKLA*GLFISH
Trigger: GTGACTAATAAAGAGGCCCAAGGCCAGTTTCTGCCT...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAAGATTGATTTTGGCCCTGATGAGGATGATGTaGGAGGGTTTGAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: GNSLERSDYPSRLRLILALMRMM*EGLRFL
Trigger: CAGGAATCTCAAACCCTCCAACATCATCCTCATCAG...GGCCAAAATCAATCTTAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGTTTTCGTGGACAGTCCCCGGGTCCAGGAGCAGTTACTCATGTGACTCAATCATATTCCATTTGGCTTaGTCTGTCATTAGCACATTG +
Preference number: 5 (lower is better)
Translates to: QFSWTVPGSRSSYSCDSIIFHLA*SVISTL
Trigger: CAATGTGCTAATGACAGACAAAGCCAAATGGAATAT...GATTGAGTCACATGAGTAACTGCTCCTGGACCCGGGGACTGTCCACGAAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp CAGCAGTCATGGACAGGAAACTCTTTGGAGAGGTCTGATTACCCCTCCCGTTTAGCACGAATATTCCATTaGGCTTTGTCTGTCATTAGC +
Preference number: 5 (lower is better)
Translates to: QQSWTGNSLERSDYPSRLARIFH*ALSVIS
Trigger: GCTAATGACAGACAAAGCCAAATGGAATATTCGTGC...TAAACGGGAGGGGTAATCAGACCTCTCCAAAGAGTTTCCTGTCCATGACTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp AGAGACTGCAGAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATTGCTTTATCACATGCTaGACTTTGGTTTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: RDCRIKYPTGQSQPLARNCFITC*TLVSIS
Trigger: GGAAATGGAAACCAAAGTCAAGCATGTGATAAAGCA...ATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTCTGCAGTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GGGATAATAGGCAGGCAGGAGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGCACGAATATTCCATTaGGCTTTGTCTGTCATTAGC +
Preference number: 5 (lower is better)
Translates to: GIIGRQESSLENYTRGDQARIFH*ALSVIS
Trigger: GCTAATGACAGACAAAGCCAAATGGAATATTCGTGC...TTGATCTCCACGTGTATAGTTTTCAAGACTGCTCTCCTGCCTGCCTATTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 90 bp GTTACAAAGCCAACTAGCTGTGCTTGTATTAGGGTGGAGAGATGTTaGAAGATAAATCCACAGGTTAAAATAAACCCCGACCCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: VTKPTSCACIRVERC*KINPQVKINPDPEL
Trigger: GAGCTCAGGGTCGGGGTTTATTTTAACCTGTGGATTTATCTTTCAACATCTCTCCACCCTAATACAAGCACAGCTAGTTGGCTTTGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS-3UTR CAA 90 bp AGAGCAGTCTTGAAAACTATACACGTGGAGATCAAGGTCAGTTCCATACAAACAAATGCAGATGTTTACTaGGAATGGAGCCTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RAVLKTIHVEIKVSSIQTNADVY*EWSLWR
Trigger: CCTCCACAGGCTCCATTCCAAGTAAACATCTGCATT...TGTTTGTATGGAACTGACCTTGATCTCCACGTGTATAGTTTTCAAGACTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS-3UTR CAA 90 bp GAATTAAGTATCCCACTGGCCAGTCACAGCCTCTTGCCAGAAATGATTAAGGCAATATTCCATTTGGCTTaGTCTGTCATTAGCACATTG +
Preference number: 5 (lower is better)
Translates to: ELSIPLASHSLLPEMIKAIFHLA*SVISTL
Trigger: CAATGTGCTAATGACAGACAAAGCCAAATGGAATAT...TGCCTTAATCATTTCTGGCAAGAGGCTGTGACTGGCCAGTGGGATACTTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 72 bp CCTGGGCCTCGCTCCCCCTGCGTGGGGCGCCTGCGATaGGACCCTGGCCCAAGCATGATCAGTAGCGACCGC +
Preference number: 6 (lower is better)
Translates to: PGPRSPCVGRLR*DPGPSMISSDR
Trigger: GCGGTCGCTACTGATCATGCTTGGGCCAGGGTCCAATCGCAGGCGCCCCACGCAGGGGGAGCGAGGCCCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 72 bp GCGTGGGGCGCCTGCGATTGGACCCTGGCCCAAGCATaGTCAGTAGCGACCGCGTACGGGCGAGCGTCCACC +
Preference number: 6 (lower is better)
Translates to: AWGACDWTLAQA*SVATAYGRAST
Trigger: GGTGGACGCTCGCCCGTACGCGGTCGCTACTGATCATGCTTGGGCCAGGGTCCAATCGCAGGCGCCCCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp GTGGTGCACCCCAGCTGGGGGCTTCCACCTGGAGGGAGGCCTGGTTaGCTGAAGGCGCTGCTGTCACTCACCAGGCTGGAGGTGAAGCGC +
Preference number: 6 (lower is better)
Translates to: VVHPSWGLPPGGRPG*LKALLSLTRLEVKR
Trigger: GCGCTTCACCTCCAGCCTGGTGAGTGACAGCAGCGCCTTCAGCAAACCAGGCCTCCCTCCAGGTGGAAGCCCCCAGCTGGGGTGCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 72 bp GGACATCGAGGACCCTGTCATGTAGCTCCATGGTCGTaGCCACCACCTCCACCAGCTCCGGGGGCCACGGCA +
Preference number: 6 (lower is better)
Translates to: GHRGPCHVAPWS*PPPPPAPGATA
Trigger: TGCCGTGGCCCCCGGAGCTGGTGGAGGTGGTGGTCACGACCATGGAGCTACATGACAGGGTCCTCGATGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp CTCGGGGTGGCTCTGAAGAGCACTCAGCAGGGTGGAGGTGATGGCTaGGTTGCAGGGAGCCTTGGCTTCCGGGTGGTGCACCAGCGCTTG +
Preference number: 6 (lower is better)
Translates to: LGVALKSTQQGGGDG*VAGSLGFRVVHQRL
Trigger: CAAGCGCTGGTGCACCACCCGGAAGCCAAGGCTCCCTGCAACCAAGCCATCACCTCCACCCTGCTGAGTGCTCTTCAGAGCCACCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 72 bp CGGGGTGGCTCTGAAGAGCACTCAGCAGGGTGGAGGTaGTGGCTTGGTTGCAGGGAGCCTTGGCTTCCGGGT +
Preference number: 6 (lower is better)
Translates to: RGGSEEHSAGWR*WLGCREPWLPG
Trigger: ACCCGGAAGCCAAGGCTCCCTGCAACCAAGCCATCACCTCCACCCTGCTGAGTGCTCTTCAGAGCCACCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp CTCCTCCATTGTCTTCAGGACGGCCTTCAGGCTGCCTaGGCTCTGGCGGAGGGACTTCCGCAGATGCATGGC +
Preference number: 6 (lower is better)
Translates to: LLHCLQDGLQAA*ALAEGLPQMHG
Trigger: GCCATGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCCTGAAGACAATGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS GCA 72 bp AGGCTGCCTGGGCTCTGGCGGAGGGACTTCCGCAGATaGATGGCTTCTGTGCCATCCATGAAGGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: RLPGLWRRDFRR*MASVPSMKEQL
Trigger: CAGCTGCTCCTTCATGGATGGCACAGAAGCCATGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000626433.1
ENST00000627962.2
CDS GCA 72 bp GCTTCTCCTCCATTGTCTTCAGGACGGCCTTCAGGCTaGCTGGGCTCTGGCGGAGGGACTTCCGCAGATGCA +
Preference number: 6 (lower is better)
Translates to: ASPPLSSGRPSG*LGSGGGTSADA
Trigger: TGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCCTGAAGACAATGGAGGAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS GCA 72 bp GGATCTCCTCATAGGAAGCCAGGTGGACCAGCAGCATaGCCACGTTCTCCACCACCTCCGGGTCGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: GSPHRKPGGPAA*PRSPPPPGRPC
Trigger: ACAGGGACGACCCGGAGGTGGTGGAGAACGTGGGCATGCTGCTGGTCCACCTGGCTTCCTATGAGGAGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 72 bp ACCAGCAGGGCTCTGTCCTGGCACAGCCGGATGCTTTaGAGGAGCAGCGCCACCACTTGTTCAAACTGCTGC +
Preference number: 6 (lower is better)
Translates to: TSRALSWHSRML*RSSATTCSNCC
Trigger: GCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGGACAGAGCCCTGCTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp ATTGTCTTCAGGACGGCCTTCAGGCTGCCTGGGCTCTaGCGGAGGGACTTCCGCAGATGCATGGCTTCTGTG +
Preference number: 6 (lower is better)
Translates to: IVFRTAFRLPGL*RRDFRRCMASV
Trigger: CACAGAAGCCATGCATCTGCGGAAGTCCCTCCGCCAGAGCCCAGGCAGCCTGAAGGCCGTCCTGAAGACAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS CAA 72 bp TGGCTGATGAGGTCCGGGACCTTCTCCAAGGGGGCCTaGTTCACAATGATACCGTCCAGCAGGAGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: WLMRSGTFSKGA*FTMIPSSRRAQ
Trigger: CTGGGCCCTCCTGCTGGACGGTATCATTGTGAACAAGGCCCCCTTGGAGAAGGTCCCGGACCTCATCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 72 bp CCACCGTACATTCGGGATTACTCGCCGCAGCACGGTTaGGGAGAGCCAGAACTGGGCAAAGCCCAGCTGTGC +
Preference number: 6 (lower is better)
Translates to: PPYIRDYSPQHG*GEPELGKAQLC
Trigger: GCACAGCTGGGCTTTGCCCAGTTCTGGCTCTCCCAAACCGTGCTGCGGCGAGTAATCCCGAATGTACGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS CAA 90 bp TCTGTCCTGGCACAGCCGGATGCTTTGCAGGAGCAGCGCCACCACTaGTTCAAACTGCTGCTCCTTGATGCAGCCCAGCAGGGACAGCAG +
Preference number: 6 (lower is better)
Translates to: SVLAQPDALQEQRHH*FKLLLLDAAQQGQQ
Trigger: CTGCTGTCCCTGCTGGGCTGCATCAAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGGACAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp CTGAAGGCGCTGCTGTCACTCACCAGGCTGGAGGTGAAGCGCTCCTaGATCTCCTGGAGCAGGGCCTTCATACTACTGGACACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LKALLSLTRLEVKRS*ISWSRAFILLDTSS
Trigger: GGAGCTGGTGTCCAGTAGTATGAAGGCCCTGCTCCAGGAGATCAAGGAGCGCTTCACCTCCAGCCTGGTGAGTGACAGCAGCGCCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 72 bp TCTAACAGCATGTCGGTGATGGACGCAGGCACCATCTaGCGGTGCAGGGTCAGAGAGACGCACGAGGACTTG +
Preference number: 6 (lower is better)
Translates to: SNSMSVMDAGTI*RCRVRETHEDL
Trigger: CAAGTCCTCGTGCGTCTCTCTGACCCTGCACCGGCAGATGGTGCCTGCGTCCATCACCGACATGCTGTTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 72 bp CTTTGCAGGAGCAGCGCCACCACTTGTTCAAACTGCTaGTCCTTGATGCAGCCCAGCAGGGACAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LCRSSATTCSNC*SLMQPSRDSSQ
Trigger: CTGGCTGCTGTCCCTGCTGGGCTGCATCAAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp CTCACCAGGCTGGAGGTGAAGCGCTCCTTGATCTCCTaGAGCAGGGCCTTCATACTACTGGACACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LTRLEVKRSLIS*SRAFILLDTSS
Trigger: GGAGCTGGTGTCCAGTAGTATGAAGGCCCTGCTCCAGGAGATCAAGGAGCGCTTCACCTCCAGCCTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp CACCGTACATTCGGGATTACTCGCCGCAGCACGGTTTaGGAGAGCCAGAACTGGGCAAAGCCCAGCTGTGCA +
Preference number: 6 (lower is better)
Translates to: HRTFGITRRSTV*ESQNWAKPSCA
Trigger: TGCACAGCTGGGCTTTGCCCAGTTCTGGCTCTCCCAAACCGTGCTGCGGCGAGTAATCCCGAATGTACGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS CAA 72 bp GCACAGCCGGATGCTTTGCAGGAGCAGCGCCACCACTaGTTCAAACTGCTGCTCCTTGATGCAGCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: AQPDALQEQRHH*FKLLLLDAAQQ
Trigger: CTGCTGGGCTGCATCAAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp GCAGGCACCATCTGCCGGTGCAGGGTCAGAGAGACGCACGAGGACTaGAAGGAGCCTCTCAAGAAGGTGATGTGCACCACGTCCTTTATC +
Preference number: 6 (lower is better)
Translates to: AGTICRCRVRETHED*KEPLKKVMCTTSFI
Trigger: GATAAAGGACGTGGTGCACATCACCTTCTTGAGAGGCTCCTTCAAGTCCTCGTGCGTCTCTCTGACCCTGCACCGGCAGATGGTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp GGCATTGTTCACCAGCAGGGCTCTGTCCTGGCACAGCCGGATGCTTaGCAGGAGCAGCGCCACCACTTGTTCAAACTGCTGCTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: GIVHQQGSVLAQPDA*QEQRHHLFKLLLLD
Trigger: ATCAAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCATCCGGCTGTGCCAGGACAGAGCCCTGCTGGTGAACAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp CAGCGGGAGCTTTGTGTTGATCTGGAGCCACTGAAGCTGTCCATCTaGGTGGGTGCCCACCAGGCTGGCCCATATAGGTGGTGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: QRELCVDLEPLKLSI*VGAHQAGPYRWCVC
Trigger: ACAGACACACCACCTATATGGGCCAGCCTGGTGGGCACCCACCAAGATGGACAGCTTCAGTGGCTCCAGATCAACACAAAGCTCCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462310.1
ENST00000626433.1
CDS CAA 90 bp CTGCTCACTCCACCGTACATTCGGGATTACTCGCCGCAGCACGGTTaGGGAGAGCCAGAACTGGGCAAAGCCCAGCTGTGCAGGGATAAT +
Preference number: 6 (lower is better)
Translates to: LLTPPYIRDYSPQHG*GEPELGKAQLCRDN
Trigger: ATTATCCCTGCACAGCTGGGCTTTGCCCAGTTCTGGCTCTCCCAAACCGTGCTGCGGCGAGTAATCCCGAATGTACGGTGGAGTGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477284.1
ENST00000630074.1
CDS TCA 72 bp AAATGCTGGCCACGTTGCCTTCTAACAGCATGTCGGTaGTGGACGCAGGCACCATCTGCCGGTGCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: KCWPRCLLTACR*WTQAPSAGAGS
Trigger: TGACCCTGCACCGGCAGATGGTGCCTGCGTCCATCACCGACATGCTGTTAGAAGGCAACGTGGCCAGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 72 bp ATGCTTTGCAGGAGCAGCGCCACCACTTGTTCAAACTaGTGCTCCTTGATGCAGCCCAGCAGGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: MLCRSSATTCSN*CSLMQPSRDSS
Trigger: GCTGCTGTCCCTGCTGGGCTGCATCAAGGAGCAGCAGTTTGAACAAGTGGTGGCGCTGCTCCTGCAAAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp TTCCACGTGATGAACAGCTCCTGGTACACAGAGATGTaGGCGTGCCGCAGCTTCAGCAGTGGCATCAGCTCC +
Preference number: 6 (lower is better)
Translates to: FHVMNSSWYTEM*ACRSFSSGISS
Trigger: GGAGCTGATGCCACTGCTGAAGCTGCGGCACGCCCACATCTCTGTGTACCAGGAGCTGTTCATCACGTGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp ATCTTGGTGGGTGCCCACCAGGCTGGCCCATATAGGTaGTGTGTCTGTGTGCCCTGGATGGCTGTAGAAGGA +
Preference number: 6 (lower is better)
Translates to: ILVGAHQAGPYR*CVCVPWMAVEG
Trigger: TCCTTCTACAGCCATCCAGGGCACACAGACACACCACCTATATGGGCCAGCCTGGTGGGCACCCACCAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462310.1
ENST00000626433.1
CDS CAA 72 bp ATCTGCCGGTGCAGGGTCAGAGAGACGCACGAGGACTaGAAGGAGCCTCTCAAGAAGGTGATGTGCACCACG +
Preference number: 6 (lower is better)
Translates to: ICRCRVRETHED*KEPLKKVMCTT
Trigger: CGTGGTGCACATCACCTTCTTGAGAGGCTCCTTCAAGTCCTCGTGCGTCTCTCTGACCCTGCACCGGCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 72 bp ACTCCCTTCATGACCTGGGGCTGCTGGCTTCACAGCTaGGGCAAAACTGGTGCTGATGCTCTATCCCTCCCT +
Preference number: 6 (lower is better)
Translates to: TPFMTWGCWLHS*GKTGADALSLP
Trigger: AGGGAGGGATAGAGCATCAGCACCAGTTTTGCCTCAGCTGTGAAGCCAGCAGCCCCAGGTCATGAAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468046.1
ENST00000631348.1
CDS CCA 72 bp GAAGAGATCTCCCCATTCCACGTGATGAACAGCTCCTaGTACACAGAGATGTGGGCGTGCCGCAGCTTCAGC +
Preference number: 6 (lower is better)
Translates to: EEISPFHVMNSS*YTEMWACRSFS
Trigger: GCTGAAGCTGCGGCACGCCCACATCTCTGTGTACCAGGAGCTGTTCATCACGTGGAATGGGGAGATCTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 72 bp CTTTGTGTTGATCTGGAGCCACTGAAGCTGTCCATCTaGGTGGGTGCCCACCAGGCTGGCCCATATAGGTGG +
Preference number: 6 (lower is better)
Translates to: LCVDLEPLKLSI*VGAHQAGPYRW
Trigger: CCACCTATATGGGCCAGCCTGGTGGGCACCCACCAAGATGGACAGCTTCAGTGGCTCCAGATCAACACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462310.1
ENST00000626433.1
CDS CCA 72 bp GCAGGCATTTTCAGAAGCCTCTTCATGGCCCTGAGCTaGACTTCGGGCCAGCCAGAGAATTTCTGCATGACC +
Preference number: 6 (lower is better)
Translates to: AGIFRSLFMALS*TSGQPENFCMT
Trigger: GGTCATGCAGAAATTCTCTGGCTGGCCCGAAGTCCAGCTCAGGGCCATGAAGAGGCTTCTGAAAATGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 72 bp AGGGGTCGATCTGGAGCATCAAGGGCAGAAGATTCCTaGAGGTTTCCACATCCGGGATCTGCTTCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: RGRSGASRAEDS*RFPHPGSASPP
Trigger: TGGAGGAGAAGCAGATCCCGGATGTGGAAACCTTCAGGAATCTTCTGCCCTTGATGCTCCAGATCGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS GCA 72 bp GGCAGAAGATTCCTGAAGGTTTCCACATCCGGGATCTaGTTCTCCTCCATTGTCTTCAGGACGGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: GRRFLKVSTSGI*FSSIVFRTAFR
Trigger: CCTGAAGGCCGTCCTGAAGACAATGGAGGAGAAGCAGATCCCGGATGTGGAAACCTTCAGGAATCTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000627962.2
ENST00000630074.1
CDS GCA 72 bp TTTGTTAAACAGTTCTGGTATGGGTGTGGTGGTACATaGCTGTACCCCAGCACTTTGGAGGCCGAGGTGGGA +
Preference number: 6 (lower is better)
Translates to: FVKQFWYGCGGT*LYPSTLEAEVG
Trigger: TCCCACCTCGGCCTCCAAAGTGCTGGGGTACAGGCATGTACCACCACACCCATACCAGAACTGTTTAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475232.1
ENST00000628561.1
CDS CAA 90 bp TTTGCCTTCCTCTTATCCTCAATGACCTCCTGGAAGCTGAGCTCATaGAACTCCATCACCAGGCAGAGGTACAGAGAAGAGATCTCCCCA +
Preference number: 6 (lower is better)
Translates to: FAFLLSSMTSWKLSS*NSITRQRYREEISP
Trigger: TGGGGAGATCTCTTCTCTGTACCTCTGCCTGGTGATGGAGTTCAATGAGCTCAGCTTCCAGGAGGTCATTGAGGATAAGAGGAAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp ACGTCCTTTATCGTTATTCGATCCGAGGGGTCGATCTaGAGCATCAAGGGCAGAAGATTCCTGAAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: TSFIVIRSEGSI*SIKGRRFLKVS
Trigger: GGAAACCTTCAGGAATCTTCTGCCCTTGATGCTCCAGATCGACCCCTCGGATCGAATAACGATAAAGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CCA 72 bp GCTCACTTTATCGTTATTCGATCCGAGGGGTCGATCTaGAGCATCAAGGGCAGAAGATTCCTGAAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: AHFIVIRSEGSI*SIKGRRFLKVS
Trigger: GGAAACCTTCAGGAATCTTCTGCCCTTGATGCTCCAGATCGACCCCTCGGATCGAATAACGATAAAGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000462310.1
ENST00000477284.1
ENST00000626433.1
ENST00000630074.1
CDS CAA 72 bp CTCTTATCCTCAATGACCTCCTGGAAGCTGAGCTCATaGAACTCCATCACCAGGCAGAGGTACAGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: LLSSMTSWKLSS*NSITRQRYREE
Trigger: CTCTTCTCTGTACCTCTGCCTGGTGATGGAGTTCAATGAGCTCAGCTTCCAGGAGGTCATTGAGGATAAGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp TCCTCCGCACGAATATTCCATTTGGCTTTGTCTGTCATTAGCACATaGGAACTCAGGTCCTGCAGTTTGCAGTGGTCACTGCTGATGAGG +
Preference number: 6 (lower is better)
Translates to: SSARIFHLALSVIST*ELRSCSLQWSLLMR
Trigger: CCTCATCAGCAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS GCA 72 bp GCTTTGTCTGTCATTAGCACATTGGAACTCAGGTCCTaGAGTTTGCAGTGGTCACTGCTGATGAGGATGATG +
Preference number: 6 (lower is better)
Translates to: ALSVISTLELRS*SLQWSLLMRMM
Trigger: CATCATCCTCATCAGCAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 72 bp AAGGGGTCTTCCTCCGCACGAATATTCCATTTGGCTTaGTCTGTCATTAGCACATTGGAACTCAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: KGSSSARIFHLA*SVISTLELRSC
Trigger: GCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGAAGACCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp TTGGCTTTGTCTGTCATTAGCACATTGGAACTCAGGTCCTGCAGTTaGCAGTGGTCACTGCTGATGAGGATGATGTTGGAGGGTTTGAGA +
Preference number: 6 (lower is better)
Translates to: LALSVISTLELRSCS*QWSLLMRMMLEGLR
Trigger: TCTCAAACCCTCCAACATCATCCTCATCAGCAGTGACCACTGCAAACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp GACTTACGAAAGGGGTCTTCCTCCGCACGAATATTCCATTTGGCTTaGTCTGTCATTAGCACATTGGAACTCAGGTCCTGCAGTTTGCAG +
Preference number: 6 (lower is better)
Translates to: DLRKGSSSARIFHLA*SVISTLELRSCSLQ
Trigger: CTGCAAACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGAAGACCCCTTTCGTAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp ATCCAGGACTTACGAAAGGGGTCTTCCTCCGCACGAATATTCCATTaGGCTTTGTCTGTCATTAGCACATTGGAACTCAGGTCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: IQDLRKGSSSARIFH*ALSVISTLELRSCS
Trigger: ACTGCAGGACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGAAGACCCCTTTCGTAAGTCCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS TCA 72 bp GGTCATCCATGCATTCCACCTGCTTTATCACATGCTTaGCTTTGGTTTCCATTTCCTCCACCACCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: GHPCIPPALSHA*LWFPFPPPPGS
Trigger: TGAACCTGGTGGTGGAGGAAATGGAAACCAAAGTCAAGCATGTGATAAAGCAGGTGGAATGCATGGATGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371957.4
ENST00000468046.1
ENST00000475232.1
ENST00000627962.2
ENST00000628561.1
ENST00000631348.1
CDS CCA 72 bp TACGAAAGGGGTCTTCCTCCGCACGAATATTCCATTTaGCTTTGTCTGTCATTAGCACATTGGAACTCAGGT +
Preference number: 6 (lower is better)
Translates to: YERGLPPHEYSI*LCLSLAHWNSG
Trigger: ACCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGAAGACCCCTTTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 72 bp TTACGAAAGGGGTCTTCCTCCGCACGAATATTCCATTaGGCTTTGTCTGTCATTAGCACATTGGAACTCAGG +
Preference number: 6 (lower is better)
Translates to: LRKGSSSARIFH*ALSVISTLELR
Trigger: CCTGAGTTCCAATGTGCTAATGACAGACAAAGCCAAATGGAATATTCGTGCGGAGGAAGACCCCTTTCGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371957.4
ENST00000627962.2
CDS CAA 90 bp GCCCAATATTTAAATTTTATGTTCTCTGGGAACATATGTTCTAAGTaGTCGGCACCTGCATTTAGCAGTGAGTGTTTGGGGCATGGACTC +
Preference number: 6 (lower is better)
Translates to: AQYLNFMFSGNICSK*SAPAFSSECLGHGL
Trigger: GAGTCCATGCCCCAAACACTCACTGCTAAATGCAGGTGCCGACAACTTAGAACATATGTTCCCAGAGAACATAAAATTTAAATATTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468046.1
ENST00000631348.1
CDS CAA 72 bp TTAAATTTTATGTTCTCTGGGAACATATGTTCTAAGTaGTCGGCACCTGCATTTAGCAGTGAGTGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: LNFMFSGNICSK*SAPAFSSECLG
Trigger: CCCCAAACACTCACTGCTAAATGCAGGTGCCGACAACTTAGAACATATGTTCCCAGAGAACATAAAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468046.1
ENST00000631348.1