RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK4 (Homo sapiens)

Ensembl gene IDs: ENSG00000101109

Ensembl transcript IDs: ENST00000372801.5, ENST00000372806.8, ENST00000480745.5, ENST00000487587.2, ENST00000488618.1, ENST00000499879.6

Found 563 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGAGCTGGGGCCCTCACAGCCTGGCCTTGCTCAGAAGTTTTGTTaGCGTCTCTTCTTAGCCTCTATGGCATCCAGGATGGGCTGCCGC +
Preference number: 1 (lower is better)
Translates to: VELGPSQPGLAQKFC*RLFLASMASRMGCR
Trigger: GCGGCAGCCCATCCTGGATGCCATAGAGGCTAAGAAGAGACGGCAACAAAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCCAGCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR TCA 90 bp TTAAATGCAGCCCTGCAAAGGGGGAGGTTGGCTCCTGGGATTCAGTaGCCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCAC +
Preference number: 1 (lower is better)
Translates to: LNAALQRGRLAPGIQ*PPNSLPVSSALMFH
Trigger: GTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCCTTTGCAGGGCTGCATTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR TCA 90 bp GGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCT +
Preference number: 1 (lower is better)
Translates to: GTLTVKRALPTGAHS*VHKGAVERRQSRSA
Trigger: AGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR CCA 90 bp TGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATaGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCC +
Preference number: 1 (lower is better)
Translates to: WTGTSAGSLQSPAPS*GPGPRASSEGPPLS
Trigger: GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR CCA 90 bp TGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTaGGTGGAGCTGGGGCCCTCACAGCCTGGCCTTGCTCAGAAGTTT +
Preference number: 1 (lower is better)
Translates to: WLTNMRQAIQNSPKA*VELGPSQPGLAQKF
Trigger: AAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR CCA 90 bp GAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCA +
Preference number: 1 (lower is better)
Translates to: EPFPLAHIPEFTKVL*RDDRAEVLANKHEA
Trigger: TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR CCA 90 bp CACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAGACGACA +
Preference number: 1 (lower is better)
Translates to: HTSRWHADCQESPSH*RTFLSSQRCCGETT
Trigger: TGTCGTCTCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp CAAGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTaGTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATG +
Preference number: 1 (lower is better)
Translates to: QESPSHWRTFLSSQR*CGETTEQKCWLTNM
Trigger: CATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp TTTTGTTGCCGTCTCTTCTTAGCCTCTATGGCATCCAGGATGGGCTaGCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGC +
Preference number: 1 (lower is better)
Translates to: FCCRLFLASMASRMG*RLDWYFCRISSISC
Trigger: GCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAGAGGCTAAGAAGAGACGGCAACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR GCA 90 bp TGCTGTCTTTTGCAAAGCCCTCTGATCTGCTTCAGGCCCGAAACCTaGCTCCATGGGTGCTTGTCTGCTATATCTGGTAGATGTTGTGGA +
Preference number: 1 (lower is better)
Translates to: CCLLQSPLICFRPET*LHGCLSAISGRCCG
Trigger: TCCACAACATCTACCAGATATAGCAGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAAGCAGATCAGAGGGCTTTGCAAAAGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp TGGAGAGCCGAGTTCCAGCCCCCAACTTCATGCAGGAAGCTCAAATaGAATCTCCTGACAAGGATAAGGCATGCTTTAGTCTCCGCTGAT +
Preference number: 1 (lower is better)
Translates to: WRAEFQPPTSCRKLK*NLLTRIRHALVSAD
Trigger: ATCAGCGGAGACTAAAGCATGCCTTATCCTTGTCAGGAGATTGCATTTGAGCTTCCTGCATGAAGTTGGGGGCTGGAACTCGGCTCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR CCA 90 bp CTGAGTTCACAAAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: LSSQRCCGETTEQKC*LTNMRQAIQNSPKA
Trigger: GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR TCA 90 bp AGCAAGTTTCTGTTAGCAAGGTTCCCTGGAACAATTAACCAAGACTaGCACAGGTCTCTTCCCCCAAAGAAGGGGCTGCATGGTTCGGTG +
Preference number: 1 (lower is better)
Translates to: SKFLLARFPGTINQD*HRSLPPKKGLHGSV
Trigger: CACCGAACCATGCAGCCCCTTCTTTGGGGGAAGAGACCTGTGTCAGTCTTGGTTAATTGTTCCAGGGAACCTTGCTAACAGAAACTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp GCTTTAGTTCACAGATGGAGAGCCGAGTTCCAGCCCCCAACTTCATaGAGGAAGCTCAAATGCAATCTCCTGACAAGGATAAGGCATGCT +
Preference number: 1 (lower is better)
Translates to: ALVHRWRAEFQPPTS*RKLKCNLLTRIRHA
Trigger: AGCATGCCTTATCCTTGTCAGGAGATTGCATTTGAGCTTCCTGCATGAAGTTGGGGGCTGGAACTCGGCTCTCCATCTGTGAACTAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR GCA 90 bp TTCCTGAGTTCACAAAGGTGCTGTGGAGAGACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAA +
Preference number: 1 (lower is better)
Translates to: FLSSQRCCGETTEQK*WLTNMRQAIQNSPK
Trigger: TTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR TCA 90 bp ATAATATACCTGACCAATGTACATACACACATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTC +
Preference number: 1 (lower is better)
Translates to: IIYLTNVHTHIKMAR*LSREPFPLAHIPEF
Trigger: GAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGGTATATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR TCA 90 bp ATATCTGGTAGATGTTGTGGAGCTCAAGGACTCGCTGAAACTGAATaGTCTGGCTCGTCCAGGGAATCTCTTTACAGCCAGGTCATCTAC +
Preference number: 1 (lower is better)
Translates to: ISGRCCGAQGLAETE*SGSSRESLYSQVIY
Trigger: GTAGATGACCTGGCTGTAAAGAGATTCCCTGGACGAGCCAGATCATTCAGTTTCAGCGAGTCCTTGAGCTCCACAACATCTACCAGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 90 bp GGGCAGTATCTGTGCTGTGACTTTAGGCAGTTGAGAGAGTGGAGATaGATGAAAGGCATTGAAAGAGCAAAGGCCAATTTGCAAAGAGGG +
Preference number: 1 (lower is better)
Translates to: GQYLCCDFRQLREWR*MKGIERAKANLQRG
Trigger: CCCTCTTTGCAAATTGGCCTTTGCTCTTTCAATGCCTTTCATCCATCTCCACTCTCTCAACTGCCTAAAGTCACAGCACAGATACTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp GAACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATaGTCAAGCAATAACAGAAGCCCAAGGCTCATTGAAAGCAAGCTG +
Preference number: 1 (lower is better)
Translates to: EQARTSNFSGSSSSK*SSNNRSPRLIESKL
Trigger: CAGCTTGCTTTCAATGAGCCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp TCAGGAGCAAAAGCAATTATGGAGTCAAATTACAGTATCCTGAGGTaGAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGTAAAGTT +
Preference number: 1 (lower is better)
Translates to: SGAKAIMESNYSILR*NPVMAPHLRERGKV
Trigger: AACTTTACCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAATTTGACTCCATAATTGCTTTTGCTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 90 bp CACTCACTCAGCAATCTTGACCAGAACACTCTTCATACCTCCCTATaGATCCTGATAGCAAGGAAAACTCCAATAGCTCACATGAAGTTA +
Preference number: 1 (lower is better)
Translates to: HSLSNLDQNTLHTSL*ILIARKTPIAHMKL
Trigger: TAACTTCATGTGAGCTATTGGAGTTTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATTGCTGAGTGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR CCA 90 bp GCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTaGATCAGCAAGCTGGGTGCACACATTCCTGAAACAAAACAAACT +
Preference number: 1 (lower is better)
Translates to: AKRLHQARLVSNRLC*ISKLGAHIPETKQT
Trigger: AGTTTGTTTTGTTTCAGGAATGTGTGCACCCAGCTTGCTGATCCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR TCA 90 bp AAAGGAGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTaGCCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATT +
Preference number: 1 (lower is better)
Translates to: KGVGAMEEAMSHTNC*PQLITYIQTLQNSI
Trigger: AATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACTCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR TCA 90 bp CAAATGCAATCTCCTGACAAGGATAAGGCATGCTTTAGTCTCCGCTaGTTATTTAGATTTCTTTCCTATCCCTTGTCCATAGCTGTCTAT +
Preference number: 1 (lower is better)
Translates to: QMQSPDKDKACFSLR*LFRFLSYPLSIAVY
Trigger: ATAGACAGCTATGGACAAGGGATAGGAAAGAAATCTAAATAATCAGCGGAGACTAAAGCATGCCTTATCCTTGTCAGGAGATTGCATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR TCA 90 bp TCTTATATATTAGAAAGTTCTCTTCATACACTCACTCAGCAATCTTaGCCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAG +
Preference number: 1 (lower is better)
Translates to: SYILESSLHTLTQQS*PEHSSYLPMHPDSK
Trigger: CTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATTGCTGAGTGAGTGTATGAAGAGAACTTTCTAATATATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR TCA 90 bp TGCAAGGCAAGGATCTATGTAGAAAAATGGAAATACCACAGTATCTaGGGCCAAATTAATCAGATACAAGTCTTAACAATAGCACTCATT +
Preference number: 1 (lower is better)
Translates to: CKARIYVEKWKYHSI*GQINQIQVLTIALI
Trigger: AATGAGTGCTATTGTTAAGACTTGTATCTGATTAATTTGGCCTCAGATACTGTGGTATTTCCATTTTTCTACATAGATCCTTGCCTTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAAAGCCTGGGTGGAGCTaGGGCCCTCACAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAKPGWS*GPHSLA
Trigger: GGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAAAGCCTGGGTGGAGCTaGGGCCCTCACAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRKPGWS*GPHSLA
Trigger: GGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR CAA 90 bp CTGGGTGGAGCTGGGGCCCTCACAGCCTGGCCTTGCTCAGAAGTTTaGTTGCCGTCTCTTCTTAGCCTCTATGGCATCCAGGATGGGCTG +
Preference number: 2 (lower is better)
Translates to: LGGAGALTAWPCSEV*LPSLLSLYGIQDGL
Trigger: CAGCCCATCCTGGATGCCATAGAGGCTAAGAAGAGACGGCAACAAAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCCAGCTCCACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGG +
Preference number: 2 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPTTEQK*WLTNMR
Trigger: CCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCAAGCCTGGGTGGAGCTaGGGCCCTCACAGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAKPGWS*GPHSLA
Trigger: GGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCGGATGGGCTGCCGCTTaGACTGGTACTTCTGCCGGA +
Preference number: 2 (lower is better)
Translates to: TSRWHADCQESPSHWRTFGWAAA*TGTSAG
Trigger: TCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCC...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAAATTCACCCAAAGCCTaGGTGGAGCTGGGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRNSPKA*VELGPS
Trigger: TGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR CAA 90 bp TGCCGTCTCTTCTTAGCCTCTATGGCATCCAGGATGGGCTGCCGCTaGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATC +
Preference number: 2 (lower is better)
Translates to: CRLFLASMASRMGCR*DWYFCRISSISCSI
Trigger: GATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAGAGGCTAAGAAGAGACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR-3UTR TCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAGCCAAGAGCCTCTTCTaGAGGTCCTCCACTGTCCAA +
Preference number: 2 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRAKSLF*RSSTVQ
Trigger: TTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGC...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCCTGAGTTCACAAAGGTaGTGTGGAGAGACGACAGAG +
Preference number: 2 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPLSSQR*CGETTE
Trigger: CTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAG...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: TSRWHADCQESPSHWRTFIKMAR*LSREPF
Trigger: GAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGAT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGCAGTCCCGTGTTTGCTaGGAGTCCCTGGTAGAGATC +
Preference number: 2 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRQSRVC*ESLVEI
Trigger: GATCTCTACCAGGGACTCTCAGCAAACACGGGACTG...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGTTCAGGCCCGAAACCTaGCTCCATGGGTGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRFRPET*LHGCLS
Trigger: AGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAA...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRTGAHS*VHKGAV
Trigger: CACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGT...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATGGCTCACTGCATCCTTaGCCTCCCTGGGCTCAGGTG +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDGSLHP*PPWAQV
Trigger: CACCTGAGCCCAGGGAGGTCAAGGATGCAGTGAGCC...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCGCTCAGAAGTTTTGTTaGCGTCTCTTCTTAGCCTCT +
Preference number: 2 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPAQKFC*RLFLAS
Trigger: AGAGGCTAAGAAGAGACGGCAACAAAACTTCTGAGC...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR-3UTR CCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTATGGCATCCAGGATaGGCTGCCGCTTGGACTGGT +
Preference number: 2 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRALWHPG*AAAWTG
Trigger: ACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAG...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGGCTCCTGGGATTCAGTaGCCCCCTAACAGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWAPGIQ*PPNSLP
Trigger: CGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGC...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGG +
Preference number: 2 (lower is better)
Translates to: YTHQDGTLTVKRALPTGATTEQK*WLTNMR
Trigger: CCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCTGAGTTCACAAAGGTaGTGTGGAGAGACGACAGAG +
Preference number: 2 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGLSSQR*CGETTE
Trigger: CTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCATTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAFTKVL*RDDRAE
Trigger: TTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAA...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAESPSH*RTFLSS
Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKATGAHS*VHKGAV
Trigger: CACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGACAATTAACCAAGACTaGCACAGGTCTCTTCCCCCA +
Preference number: 2 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRTINQD*HRSLPP
Trigger: TGGGGGAAGAGACCTGTGTCAGTCTTGGTTAATTGT...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAA +
Preference number: 2 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRTEQKC*LTNMRQ
Trigger: TTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGFTKVL*RDDRAE
Trigger: TTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYIKMAR*LSREPF
Trigger: GAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGAT...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCAAGACCAGCCTGACTaGCATGGTGAAACCCCGTCT +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDQDQPD*HGETPS
Trigger: AGACGGGGTTTCACCATGTCAGTCAGGCTGGTCTTG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CAGCCCCCAACTTCATGCAGGAAGCTCAAATGCAATCTCCTGACAAGGATAAGGGTGCTAGGCTCCACTTaGAAACACTTCCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: QPPTSCRKLKCNLLTRIRVLGST*KHFPSA
Trigger: AGCACTTGGGAAGTGTTTTCAAGTGGAGCCTAGCAC...CCTTATCCTTGTCAGGAGATTGCATTTGAGCTTCCTGCATGAAGTTGGGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGCCTCCCGGTGTCCTCTaGCCTCATGTTCCACAGTAC +
Preference number: 2 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRPPGVL*PHVPQY
Trigger: GTACTGTGGAACATGAGGGCAGAGGACACCGGGAGG...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAA +
Preference number: 2 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGTEQKC*LTNMRQ
Trigger: TTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGT...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATGCAAAGGGGGAGGTTaGCTCCTGGGATTCAGTGAC +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQCKGGG*LLGFSD
Trigger: GTCACTGAATCCCAGGAGCCAACCTCCCCCTTTGCA...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTC +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQIKMAR*LSREPF
Trigger: GAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGAT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CATAGCTCATTTCACAAGATACAAGTCAGTGAGAGTTCACAAACCATTCATCCTGGCAGGGGAATCGCTTaGACCTGGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: HSSFHKIQVSESSQTIHPGRGIA*TWEAEV
Trigger: AACCTCCGCCTCCCAGGTTCAAGCGATTCCCCTGCC...AGGATGAATGGTTTGTGAACTCTCACTGACTTGTATCTTGTGAAATGAGCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGTTCAGGCCCGAAACCTaGCTCCATGGGTGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRFRPET*LHGCLS
Trigger: AGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAA...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATACAGTATCCTGAGGTaGAACCCAGTCATGGCTCCC +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQYSILR*NPVMAP
Trigger: GGGAGCCATGACTGGGTTGCACCTCAGGATACTGTA...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCCCGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: INVSWIEIYSLKESRLQFPGGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCCGCCTCCCGG...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAA +
Preference number: 2 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAFTKVL*RDDRAE
Trigger: TTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAA...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA +
Preference number: 2 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRESPSH*RTFLSS
Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTC...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 90 bp AGAGAGTGGAGATGGATGAAAGGCATTGAAAGAGCAAAGGCCAATTaGCAAAGAGGGTGCCAGGCTTCTCCTGGGACTCAAAGAGTAAAC +
Preference number: 2 (lower is better)
Translates to: REWRWMKGIERAKAN*QRGCQASPGTQRVN
Trigger: GTTTACTCTTTGAGTCCCAGGAGAAGCCTGGCACCCTCTTTGCAAATTGGCCTTTGCTCTTTCAATGCCTTTCATCCATCTCCACTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CCACAGATCCATATGATCCTCATAACACAGAATGATTGCAGCCTCCAGAATCCAAGCAATTTGGGAGGCTaGGGCAGGCAGATCACAAGA +
Preference number: 2 (lower is better)
Translates to: PQIHMILITQNDCSLQNPSNLGG*GRQITR
Trigger: TCTTGTGATCTGCCTGCCTCAGCCTCCCAAATTGCT...TGGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGGATCATATGGATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAATGGTGCAGGGGTGTaGATCCTGGATGCTTTGGTT +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDNGAGV*ILDALV
Trigger: AACCAAAGCATCCAGGATGCACACCCCTGCACCATT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATTTTCCTTTGTGGACTaGACACAGTCCCGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQFSFVD*TQSRVC
Trigger: GCAAACACGGGACTGTGTTCAGTCCACAAAGGAAAA...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAGTCACAGGGTTATTGTaGAGTTTAGAGCCTACCCAG +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQVTGLL*SLEPTQ
Trigger: CTGGGTAGGCTCTAAACTTCACAATAACCCTGTGAC...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAACTGGGCAGTATCTGTaGTGTGACTTTAGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQTGQYL*CDFRQL
Trigger: CAACTGCCTAAAGTCACAGCACAGATACTGCCCAGT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATGCCTACCCAGCTCAGTaGCTGATATATAATAGGTGC +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDAYPAQ*LIYNRC
Trigger: GCACCTATTATATATCAGGCACTGAGCTGGGTAGGC...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAATTCACCCAAAGCCTaGGTGGAGCTGGGGCCCTCA +
Preference number: 2 (lower is better)
Translates to: INVSWIEIYSLKESRLQFNSPKA*VELGPS
Trigger: TGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATGTGCCAGGCTTCTCCTaGGACTCAAAGAGTAAACAT +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDVPGFS*DSKSKH
Trigger: ATGTTTACTCTTTGAGTCCCAGGAGAAGCCTGGCAC...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAAACGCTTTTCCTTTGTaGACTGAACACAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQNAFPL*TEHSPV
Trigger: CACGGGACTGTGTTCAGTCCACAAAGGAAAAGCGTT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAACGCTTTTCCTTTGTaGACTGAACACAGTCCCGTG +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDNAFPL*TEHSPV
Trigger: CACGGGACTGTGTTCAGTCCACAAAGGAAAAGCGTT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAGTTGGATCAGCAAGCTaGGTGCACACATTCCTGAAA +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQVGSAS*VHTFLK
Trigger: TTTCAGGAATGTGTGCACCCAGCTTGCTGATCCAAC...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAACCACTCATCCTGGTCTaGAGCTTTGGCTCTACTCTG +
Preference number: 2 (lower is better)
Translates to: NLDQNTLHTSLCILIARKPLILV*SFGSTL
Trigger: CAGAGTAGAGCCAAAGCTCCAGACCAGGATGAGTGG...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAAGCCCAAGGCTCATTaGAAGCAAGCTGACATATCT +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDKPKAH*KQADIS
Trigger: AGATATGTCAGCTTGCTTTCAATGAGCCTTGGGCTT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAACTCAAAGCTTTCCCTTaGACATCACCAATAGCTCCA +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQLKAFP*TSPIAP
Trigger: TGGAGCTATTGGTGATGTCCAAGGGAAAGCTTTGAG...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAGCAATAGACTTTGTTaGATCAGCAAGCTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDSNRLC*ISKLGA
Trigger: TGCACCCAGCTTGCTGATCCAACAAAGTCTATTGCT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATCTGTGTGTTCAGATTaGGCCTCCTGGAAAACAAAT +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQSVCSD*ASWKTN
Trigger: ATTTGTTTTCCAGGAGGCTCAATCTGAACACACAGA...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGGAGATGCCACCACACTaGGTGGGGAATCTATTTATA +
Preference number: 2 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWEMPPH*VGNLFI
Trigger: TATAAATAGATTCCCCACGCAGTGTGGTGGCATCTC...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACATGTTTGGAAAAGAAGTaGAGTGAAGGTCTTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GLELWLYSATDPYDPHNTCLEKK*SEGLPS
Trigger: TGAAGGAAGACCTTCACTGCACTTCTTTTCCAAACA...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAA +
Preference number: 2 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRTEQKC*LTNMRQ
Trigger: TTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 90 bp ATAACAGAATCTGGCCACAGAAGAGGCACATTCCCTGCCTTTCCATaGATTCCCAGGTTTCAGGAGCAAAAGCAATTATGGAGTCAAATT +
Preference number: 2 (lower is better)
Translates to: ITESGHRRGTFPAFP*IPRFQEQKQLWSQI
Trigger: AATTTGACTCCATAATTGCTTTTGCTCCTGAAACCTGGGAATCAATGGAAAGGCAGGGAATGTGCCTCTTCTGTGGCCAGATTCTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACATTGTTTTCTCCCTGGTaGTATCTTCATAGGGAAATT +
Preference number: 2 (lower is better)
Translates to: GLELWLYSATDPYDPHNTLFSPW*YLHREI
Trigger: AATTTCCCTATGAAGATATCACCAGGGAGAAAACAA...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR GCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCAAAGCCCTCTGATCTaGTTCAGGCCCGAAACCTGC +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHQSPLI*FRPETC
Trigger: GCAGGTTTCGGGCCTGAAGCAGATCAGAGGGCTTTG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGCATAGCTATTTCAGTTaGCAAGCCCTGAAGACTAAC +
Preference number: 2 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRHSYFS*QALKTN
Trigger: GTTAGTCTTCAGGGCTTGGCAACTGAAATAGCTATG...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGATGGATGAAAGGCATTaGAAGAGCAAAGGCCAATTT +
Preference number: 2 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWMDERH*KSKGQF
Trigger: AAATTGGCCTTTGCTCTTTCAATGCCTTTCATCCAT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGAAACAGTCACATATTTaGACGTGGGTCACAAAAGCA +
Preference number: 2 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRKQSHI*TWVTKA
Trigger: TGCTTTTGTGACCCACGTTCAAATATGTGACTGTTT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCACTGGGCAGTATCTGTaGTGTGACTTTAGGCAGTTG +
Preference number: 2 (lower is better)
Translates to: INVSWIEIYSLKESRLQFTGQYL*CDFRQL
Trigger: CAACTGCCTAAAGTCACAGCACAGATACTGCCCAGT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAACTCTTAACGCTAACTTaGTTTGTGATTTTGGCCATT +
Preference number: 2 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQLLTLT*FVILAI
Trigger: AATGGCCAAAATCACAAAGCAAGTTAGCGTTAAGAG...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCAACCTGCCTCCATGGGTaGTTGTCTGCTATATCTGGT +
Preference number: 2 (lower is better)
Translates to: IQLSFQPKNASSSYLVYATCLHG*LSAISG
Trigger: ACCAGATATAGCAGACAAGCACCCATGGAGGCAGGT...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTAATTCGCACAGCAAATaGTGCAGGGGTGTGCATCCT +
Preference number: 2 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFNSHSK*CRGVHP
Trigger: AGGATGCACACCCCTGCACCATTTGCTGTGCGAATT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTCAAATTACAGTATCCTaGGGTGCAACCCAGTCATGG +
Preference number: 2 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFQITVS*GATQSW
Trigger: CCATGACTGGGTTGCACCTCAGGATACTGTAATTTG...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAATCAATGAATTACAACTaGCAGCAGAGAATGGAGAAG +
Preference number: 2 (lower is better)
Translates to: NLDQNTLHTSLCILIARKSMNYN*QQRMEK
Trigger: CTTCTCCATTCTCTGCTGTCAGTTGTAATTCATTGA...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGTTATCCTTTCCAGGCTaGTTAGCAGTAAAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWLSFPG*LAVKEK
Trigger: TTTCTCTTTTACTGCTAAGCAGCCTGGAAAGGATAA...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCCTCAAAGCTTTCCCTTaGACATCACCAATAGCTCCA +
Preference number: 2 (lower is better)
Translates to: INVSWIEIYSLKESRLQFLKAFP*TSPIAP
Trigger: TGGAGCTATTGGTGATGTCCAAGGGAAAGCTTTGAG...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTATCCAATTGGTGGCTTaGGGAAAGGGACAAAAAGGG +
Preference number: 2 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFIQLVA*GKGQKG
Trigger: CCCTTTTTGTCCCTTTCCCCAAGCCACCAATTGGAT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCAAGGAAGATGGCTCTATaGTGTCTTTTGCAAAGCCCT +
Preference number: 2 (lower is better)
Translates to: IQLSFQPKNASSSYLVYARKMAL*CLLQSP
Trigger: AGGGCTTTGCAAAAGACAGCATAGAGCCATCTTCCT...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACATCCAATTGGTGGCTTaGGGAAAGGGACAAAAAGGG +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHIQLVA*GKGQKG
Trigger: CCCTTTTTGTCCCTTTCCCCAAGCCACCAATTGGAT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTACCTGGCTAATATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFTWLIW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATATTAGCCAGGT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCTTTCTCCTCCTCTCTaGCCAAGTGCAAAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHLSPPL*PSAKFF
Trigger: AAAGAACTTTGCACTTGGCCAGAGAGGAGGAGAAAG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 90 bp AGGACTTGTTCCTTTGCCTTTCTGTCACTAGAAAACAAATATACCTaGTCAGGAAATTTCTCTGATCCAAAACAAATTGACTTCTGGCCA +
Preference number: 2 (lower is better)
Translates to: RTCSFAFLSLENKYT*SGNFSDPKQIDFWP
Trigger: TGGCCAGAAGTCAATTTGTTTTGGATCAGAGAAATTTCCTGACAAGGTATATTTGTTTTCTAGTGACAGAAAGGCAAAGGAACAAGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 90 bp CAATGTCACAAAGATTGTTCACAACACCATTATCCAGGCTATATATaGAGGTTCTCGTTAATAAGGGTTTGTGGTCCAAAGGACAGTTTA +
Preference number: 2 (lower is better)
Translates to: QCHKDCSQHHYPGYI*RFSLIRVCGPKDSL
Trigger: TAAACTGTCCTTTGGACCACAAACCCTTATTAACGAGAACCTCAATATATAGCCTGGATAATGGTGTTGTGAACAATCTTTGTGACATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372806.8
3UTR-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACACCTGGCTAATATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHTWLIW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATATTAGCCAGGT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTAGTCTTAAAGAATTCTaGGATTTTTGGCCAGGCAAG +
Preference number: 2 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFSLKEF*DFWPGK
Trigger: CTTGCCTGGCCAAAAATCTCAGAATTCTTTAAGACT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACGACCTCAAATTTCTCTaGAAGCTCGAGTTCCAAATG +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHDLKFL*KLEFQM
Trigger: CATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTC...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCATCCAGAAAGAACAATTaGAAGCTATTGGGAGAAGAA +
Preference number: 2 (lower is better)
Translates to: IQLSFQPKNASSSYLVYASRKNN*KLLGEE
Trigger: TTCTTCTCCCAATAGCTTTCAATTGTTCTTTCTGGA...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACATGGATGAAAGGCATTaGAAGAGCAAAGGCCAATTT +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHMDERH*KSKGQF
Trigger: AAATTGGCCTTTGCTCTTTCAATGCCTTTCATCCAT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCACTCTTAACGCTAACTTaGTTTGTGATTTTGGCCATT +
Preference number: 2 (lower is better)
Translates to: IQLSFQPKNASSSYLVYALLTLT*FVILAI
Trigger: AATGGCCAAAATCACAAAGCAAGTTAGCGTTAAGAG...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR GCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACTCCTCTCTGGCCAAGTaGAAAGTTCTTTGTTTAAAA +
Preference number: 2 (lower is better)
Translates to: PQLITYIQTLQNSISSQHSSLAK*KVLCLK
Trigger: TTTTAAACAAAGAACTTTGCACTTGGCCAGAGAGGA...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCAGGATGGGCTGCCGCTaGGACTGGTACTTCTGCCGG +
Preference number: 3 (lower is better)
Translates to: TSRWHADCQESPSHWRTFRMGCR*DWYFCR
Trigger: CCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR GCA 72 bp AAGACTGACACAGGTCTCTTCCCCCAAAGAAGGGGCTaGATGGTTCGGTGGCCTGGGAGTGAGGACCCTGAA +
Preference number: 3 (lower is better)
Translates to: KTDTGLFPQRRG*MVRWPGSEDPE
Trigger: TTCAGGGTCCTCACTCCCAGGCCACCGAACCATGCAGCCCCTTCTTTGGGGGAAGAGACCTGTGTCAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp GCCTCTATGGCATCCAGGATGGGCTGCCGCTTGGACTaGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCC +
Preference number: 3 (lower is better)
Translates to: ASMASRMGCRLD*YFCRISSISCS
Trigger: GGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR CCA 72 bp AAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTaGGGCCCTCACAGCCTGGCCTTGCTCAGAAGTTTT +
Preference number: 3 (lower is better)
Translates to: KPSRIHPKPGWS*GPHSLALLRSF
Trigger: AAAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR TCA 72 bp TGCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTaGAGGTCCTCCACTGTCCAACTCTTAAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: CSIMGSRAKSLF*RSSTVQLLSMW
Trigger: CCACATGCTTAAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR CCA 72 bp AGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGA +
Preference number: 3 (lower is better)
Translates to: RWHADCQESPSH*RTFLSSQRCCG
Trigger: TCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp ACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATaGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCT +
Preference number: 3 (lower is better)
Translates to: TSAGSLQSPAPS*GPGPRASSEGP
Trigger: AGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
3UTR TCA 72 bp GGAAGATGGCTCTATGCTGTCTTTTGCAAAGCCCTCTaGTCTGCTTCAGGCCCGAAACCTGCCTCCATGGGT +
Preference number: 3 (lower is better)
Translates to: GRWLYAVFCKAL*SASGPKPASMG
Trigger: ACCCATGGAGGCAGGTTTCGGGCCTGAAGCAGATCAGAGGGCTTTGCAAAAGACAGCATAGAGCCATCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 72 bp TTGCAAAGCCCTCTGATCTGCTTCAGGCCCGAAACCTaGCTCCATGGGTGCTTGTCTGCTATATCTGGTAGA +
Preference number: 3 (lower is better)
Translates to: LQSPLICFRPET*LHGCLSAISGR
Trigger: TCTACCAGATATAGCAGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAAGCAGATCAGAGGGCTTTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp CCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAA +
Preference number: 3 (lower is better)
Translates to: PLAHIPEFTKVL*RDDRAEVLANK
Trigger: TTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGGCCAAGATCGTGCCATaGTACTCCAGCCTGGGCGAC +
Preference number: 3 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWAKIVP*YSSLGD
Trigger: GTCGCCCAGGCTGGAGTACAATGGCACGATCTTGGC...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR TCA 72 bp CTGACCAATGTACATACACACATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTCCCACTGGCGCACATT +
Preference number: 3 (lower is better)
Translates to: LTNVHTHIKMAR*LSREPFPLAHI
Trigger: AATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR TCA 72 bp AGATGTTGTGGAGCTCAAGGACTCGCTGAAACTGAATaGTCTGGCTCGTCCAGGGAATCTCTTTACAGCCAG +
Preference number: 3 (lower is better)
Translates to: RCCGAQGLAETE*SGSSRESLYSQ
Trigger: CTGGCTGTAAAGAGATTCCCTGGACGAGCCAGATCATTCAGTTTCAGCGAGTCCTTGAGCTCCACAACATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 72 bp TCACAAAGGTGCTGTGGAGAGACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGGCAAGCCATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: SQRCCGETTEQK*WLTNMRQAIQN
Trigger: ATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR GCA 72 bp CACGGTACAAGAACTGTCCCAAACCTAATTTTTAAATaGAGCCCTGCAAAGGGGGAGGTTGGCTCCTGGGAT +
Preference number: 3 (lower is better)
Translates to: HGTRTVPNLIFK*SPAKGEVGSWD
Trigger: ATCCCAGGAGCCAACCTCCCCCTTTGCAGGGCTGCATTTAAAAATTAGGTTTGGGACAGTTCTTGTACCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp CAAAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAAGCCATCCAGAATTCA +
Preference number: 3 (lower is better)
Translates to: QRCCGETTEQKC*LTNMRQAIQNS
Trigger: TGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAAGAGCAAAGGCCAATTaGCAAAGAGGGTGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQRAKAN*QRGCQA
Trigger: AGCCTGGCACCCTCTTTGCAAATTGGCCTTTGCTCT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAACACAGTCCCGTGTTaGCTGAGAGTCCCTGGTAGA +
Preference number: 3 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDNTVPC*LRVPGR
Trigger: TCTACCAGGGACTCTCAGCAAACACGGGACTGTGTT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGTTCTGTGTGTTCAGATaGAGCCTCCTGGAAAACAAA +
Preference number: 3 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRFCVFR*SLLENK
Trigger: TTTGTTTTCCAGGAGGCTCAATCTGAACACACAGAA...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATTGCCTCCATGGGTGCTaGTCTGCTATATCTGGTAGA +
Preference number: 3 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDCLHGC*SAISGR
Trigger: TCTACCAGATATAGCAGACAAGCACCCATGGAGGCA...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCATCCAATTGGTGGCTaGGGGAAAGGGACAAAAAGG +
Preference number: 3 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDHPIGG*GKGTKR
Trigger: CCTTTTTGTCCCTTTCCCCAAGCCACCAATTGGATG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp CAGCCCCCAACTTCATGCAGGAAGCTCAAATGCAATCTCCTGACAAGGATAAGGACTCACTCAGCAATCTaGACCAGAACACTCTTCATA +
Preference number: 3 (lower is better)
Translates to: QPPTSCRKLKCNLLTRIRTHSAI*TRTLFI
Trigger: TATGAAGAGTGTTCTGGTCAAGATTGCTGAGTGAGT...CCTTATCCTTGTCAGGAGATTGCATTTGAGCTTCCTGCATGAAGTTGGGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR GCA 72 bp CTCTGTTTTCCGTATCCGCCACATAGCTATTTCAGTTaGCAAGCCCTGAAGACTAACAACTGCCTCTTGCAT +
Preference number: 3 (lower is better)
Translates to: LCFPYPPHSYFS*QALKTNNCLLH
Trigger: ATGCAAGAGGCAGTTGTTAGTCTTCAGGGCTTGGCAACTGAAATAGCTATGTGGCGGATACGGAAAACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 72 bp CCCTCTACCCCTGTGTGTAAGGAATGTGGAGCAACATaGCACGTGTATGATTTTTACATGAACAATGAGAGC +
Preference number: 3 (lower is better)
Translates to: PSTPVCKECGAT*HVYDFYMNNES
Trigger: GCTCTCATTGTTCATGTAAAAATCATACACGTGGCATGTTGCTCCACATTCCTTACACACAGGGGTAGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR GCA 72 bp AATAACAGAATCTGGCCACAGAAGAGGCACATTCCCTaGCTTTCCATTGATTCCCAGGTTTCAGGAGCAAAA +
Preference number: 3 (lower is better)
Translates to: NNRIWPQKRHIP*LSIDSQVSGAK
Trigger: TTTTGCTCCTGAAACCTGGGAATCAATGGAAAGGCAGGGAATGTGCCTCTTCTGTGGCCAGATTCTGTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp ATGAACAATGAGAGCTTCAAAAACGCTTTTCCTTTGTaGACTGAACACAGTCCCGTGTTTGCTGAGAGTCCC +
Preference number: 3 (lower is better)
Translates to: MNNESFKNAFPL*TEHSPVFAESP
Trigger: GGGACTCTCAGCAAACACGGGACTGTGTTCAGTCCACAAAGGAAAAGCGTTTTTGAAGCTCTCATTGTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp CTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTaGATCAGCAAGCTGGGTGCACACATTCCTGAAACA +
Preference number: 3 (lower is better)
Translates to: LHQARLVSNRLC*ISKLGAHIPET
Trigger: TGTTTCAGGAATGTGTGCACCCAGCTTGCTGATCCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTAACACAGTCCCGTGTTaGCTGAGAGTCCCTGGTAGA +
Preference number: 3 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFNTVPC*LRVPGR
Trigger: TCTACCAGGGACTCTCAGCAAACACGGGACTGTGTT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAAAACAGTCACATATTaGAACGTGGGTCACAAAAGC +
Preference number: 3 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDKTVTY*NVGHKS
Trigger: GCTTTTGTGACCCACGTTCAAATATGTGACTGTTTT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCCATTCATCCATCCAATaGGTGGCTTGGGGAAAGGGA +
Preference number: 3 (lower is better)
Translates to: INVSWIEIYSLKESRLQFHSSIQ*VAWGKG
Trigger: TCCCTTTCCCCAAGCCACCAATTGGATGGATGAATG...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACAAAATTTCCACATTCCTaGCAGAAGACATCCATAGAT +
Preference number: 3 (lower is better)
Translates to: GLELWLYSATDPYDPHNTKFPHS*QKTSID
Trigger: ATCTATGGATGTCTTCTGCAAGGAATGTGGAAATTT...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR GCA 72 bp AGCTCACATGAAGTTAAGATTCCTGATTCCATATACTaGATCTACAGTAATCTGAAGGCAGGGATAGGGGGT +
Preference number: 3 (lower is better)
Translates to: SSHEVKIPDSIY*IYSNLKAGIGG
Trigger: ACCCCCTATCCCTGCCTTCAGATTACTGTAGATGCAGTATATGGAATCAGGAATCTTAACTTCATGTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCTGTGACTTTAGGCAGTaGAGAGAGTGGAGATGGATG +
Preference number: 3 (lower is better)
Translates to: INVSWIEIYSLKESRLQFCDFRQ*REWRWM
Trigger: CATCCATCTCCACTCTCTCAACTGCCTAAAGTCACA...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGTGCATCCTGGATGCTTaGGTTTTTAAAACTTACTTG +
Preference number: 3 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRCILDA*VFKTYL
Trigger: CAAGTAAGTTTTAAAAACCAAAGCATCCAGGATGCA...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAGCAAGATCCTCAAATaGTCCTCTGTTTTCCGTATC +
Preference number: 3 (lower is better)
Translates to: INVSWIEIYSLKESRLQFSKILK*SSVFRI
Trigger: GATACGGAAAACAGAGGACAATTTGAGGATCTTGCT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp ATACAAGTCAGTGAGAGTTCACAAACCATTCATCCTCCCGAACAATTTAAGAATGATCTAAAACGCAATTaGTCCAGGTGCAGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: IQVSESSQTIHPPEQFKNDLKRN*SRCSGS
Trigger: TGAACCACTGCACCTGGACAAATTGCGTTTTAGATC...ATTCTTAAATTGTTCGGGAGGATGAATGGTTTGTGAACTCTCACTGACTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTGCTCTTAACGCTAACTaGCTTTGTGATTTTGGCCAT +
Preference number: 3 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFALNAN*LCDFGH
Trigger: ATGGCCAAAATCACAAAGCAAGTTAGCGTTAAGAGC...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CCA 72 bp CTAGTAAATAAGGAGCTGCAATCTTTAGAGGCAACATaGTATGCTAGAAAGGACACTGGAATAAGAATCAGA +
Preference number: 3 (lower is better)
Translates to: LVNKELQSLEAT*YARKDTGIRIR
Trigger: TCTGATTCTTATTCCAGTGTCCTTTCTAGCATACCATGTTGCCTCTAAAGATTGCAGCTCCTTATTTACTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR-3UTR CAA 90 bp ATACAAGTCAGTGAGAGTTCACAAACCATTCATCCTCCCGAACAATTTAAGAATCATTGTGTCACATGTTaGGAAAAGAAGTGCAGTGAA +
Preference number: 3 (lower is better)
Translates to: IQVSESSQTIHPPEQFKNHCVTC*EKKCSE
Trigger: TTCACTGCACTTCTTTTCCAAACATGTGACACAATG...ATTCTTAAATTGTTCGGGAGGATGAATGGTTTGTGAACTCTCACTGACTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTCCCTGGGCTCAGGTaGTCCTCCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPLPGLR*SSHFSL
Trigger: GAGGCTGAAGTGGGAGGATCACCTGAGCCCAGGGAG...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCAAGCCTGGGTGGAGCTaGGGCCCTCACAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPKPGWS*GPHSLA
Trigger: GGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTT...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCACTCCCGCGGACCTCCTaGGCCCGCCCCGCAGACCCT +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEALPRTS*ARPADP
Trigger: AGGGTCTGCGGGGCGGGCTCAGGAGGTCCGCGGGAG...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499879.6
CDS-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCCTCCCGGTGTCCTCTaGCCTCATGTTCCACAGTAC +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPPPGVL*PHVPQY
Trigger: GTACTGTGGAACATGAGGGCAGAGGACACCGGGAGG...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAGGCTCACTGCATCCTTaGCCTCCCTGGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTGSLHP*PPWAQV
Trigger: CACCTGAGCCCAGGGAGGTCAAGGATGCAGTGAGCC...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCCCCAGACCCGCTCACTaGTCCATCCTCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFPRPAH*SILPRT
Trigger: GGTCCGCGGGAGGATGGAGCAGTGAGCGGGTCTGGG...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACCCAGACCCGCTCACTaGTCCATCCTCCCGCGGACC +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRPRPAH*SILPRT
Trigger: GGTCCGCGGGAGGATGGAGCAGTGAGCGGGTCTGGG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTGTGGCTGTGGCCCTCTaGTCAGGGCTCTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPVAVAL*SGLFTR
Trigger: TCTTGTAAAGAGCCCTGAGCAGAGGGCCACAGCCAC...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTTCACCCAGGCTAGAGTaGAGTGGTGAGACCATGGCT +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPSPRLE*SGETMA
Trigger: AGCCATGGTCTCACCACTGCACTCTAGCCTGGGTGA...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAGCTGCAGGAGCTGAGTaGCTGTGGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LHHGVQGQEPLLKVLHCPAAGAE*LWPSAQ
Trigger: CTGAGCAGAGGGCCACAGCCACTCAGCTCCTGCAGC...TGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCGCTGCAGGAGCTGAGTaGCTGTGGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPAAGAE*LWPSAQ
Trigger: CTGAGCAGAGGGCCACAGCCACTCAGCTCCTGCAGC...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTTGGCTCCATCAGTCATaGTGCTGGCTACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPWLHQS*CWLLGQ
Trigger: CTGTCCGAGTAGCCAGCACCATGACTGATGGAGCCA...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCGGATGGGCTGCCGCTTaGACTGGTACTTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: APSWGPGPRASSEGPPLSGWAAA*TGTSAG
Trigger: TCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCC...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCACCGTCTCCATGGCGCTaGCAGCAGCCGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAPSPWR*QQPPRP
Trigger: GGGTCTGGGCGGCTGCTGGCAGCGCCATGGAGACGG...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCTCCAACTTTTTCAGCTaGCGGCGCGGCGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPSNFFS*RRGGFL
Trigger: GAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGA...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTAGTGAGCCAAGATCGTaGCATTGTACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPSEPRS*HCTPAW
Trigger: CCAGGCTGGAGTACAATGGCACGATCTTGGCTCACT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCAGCCGGGCGTGGTGGTaGAGCACCTGTAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFSRAWW*STCSGS
Trigger: GCTGCCACTACAGGTGCTGCACCACCACGCCCGGCT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTAGCCTCCTGACAAGCTaGGATTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPSLLTS*DYRCAP
Trigger: TGGTGCACACCTGTAATCCCAGCTTGTCAGGAGGCT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAGCTCCTGGGATTCAGTaGCCCCCTAACAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRAPGIQ*PPNSLP
Trigger: CGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGC...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCCTCCCTGGGCTCAGGTaGTCCTCCCACTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFLPGLR*SSHFSL
Trigger: GAGGCTGAAGTGGGAGGATCACCTGAGCCCAGGGAG...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAACTCTTTCCAACTTTTTCAGCTaGCGGCGCGGCGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HGVQGQEPLLKVLHCPTLSNFFS*RRGGFL
Trigger: GAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGA...AAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCGTGGCTGTGGCCCTCTaGTCAGGGCTCTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: APSWGPGPRASSEGPPLSVAVAL*SGLFTR
Trigger: TCTTGTAAAGAGCCCTGAGCAGAGGGCCACAGCCAC...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCTGGTCCACTTCCCGCTaGTGGGATTCCTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPWSTSR*WDSWRF
Trigger: GAAACGCCAGGAATCCCAGCAGCGGGAAGTGGACCA...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCCCTCCCGGTGTCCTCTaGCCTCATGTTCCACAGTAC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPPPGVL*PHVPQY
Trigger: GTACTGTGGAACATGAGGGCAGAGGACACCGGGAGG...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCGGCACTCCTGACAAATaGGTGCTGCAGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: APSWGPGPRASSEGPPLSGTPDK*VLQELS
Trigger: ACTCAGCTCCTGCAGCACCCATTTGTCAGGAGTGCC...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp CTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAGGCTGCCGCTTGGACTaGTACTTCTGCCGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LHHGVQGQEPLLKVLHCPGCRLD*YFCRIS
Trigger: AGAGATCCGGCAGAAGTACCAGTCCAAGCGGCAGCC...TGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCAATTCACCCAAAGCCTaGGTGGAGCTGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPNSPKA*VELGPS
Trigger: TGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATT...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: APSWGPGPRASSEGPPLSESPSH*RTFLSS
Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTC...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACACAGTCCCGTGTTTGCTaGGAGTCCCTGGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTQSRVC*ESLVEI
Trigger: GATCTCTACCAGGGACTCTCAGCAAACACGGGACTG...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTAGTCCCTTCCAGCTCTaGCATTCTGTGTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPSPFQL*HSVCSD
Trigger: ATCTGAACACACAGAATGTCAGAGCTGGAAGGGACT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCTCGAACCATCGTaGCAGAATCCATTTCATCCT +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPLLEPS*QNPFHP
Trigger: AGGATGAAATGGATTCTGGCACGATGGTTCGAGCAG...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACATTCAGGCCCGAAACCTaGCTCCATGGGTGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTFRPET*LHGCLS
Trigger: AGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAA...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGCCGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRPGGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCCGCCTCCCGG...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAGGATGGGCTGCCGCTTaGACTGGTACTTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRGWAAA*TGTSAG
Trigger: TCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCC...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAGGATGGGCTGCCGCTTaGACTGGTACTTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAGWAAA*TGTSAG
Trigger: TCCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCC...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTATCCAATTGGTGGCTTaGGGAAAGGGACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPIQLVA*GKGQKG
Trigger: CCCTTTTTGTCCCTTTCCCCAAGCCACCAATTGGAT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCATCCATCCAATTGGTaGCTTGGGGAAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPHPSNW*LGERDK
Trigger: TTTGTCCCTTTCCCCAAGCCACCAATTGGATGGATG...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTATTCATCCATCCAATTaGTGGCTTGGGGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPIHPSN*WLGERD
Trigger: GTCCCTTTCCCCAAGCCACCAATTGGATGGATGAAT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCCGTCTCCATGGCGCTaGCAGCAGCCGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDPSPWR*QQPPRP
Trigger: GGGTCTGGGCGGCTGCTGGCAGCGCCATGGAGACGG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAACTCTTTCCACTTCCCGCTGCTaGGATTCCTGGCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: HGVQGQEPLLKVLHCPTLSTSRC*DSWRFS
Trigger: ACTGAAACGCCAGGAATCCCAGCAGCGGGAAGTGGA...AAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCCTATGGCATCCAGGATaGGCTGCCGCTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFLWHPG*AAAWTG
Trigger: ACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAG...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACTATGGCATCCAGGATaGGCTGCCGCTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRLWHPG*AAAWTG
Trigger: ACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGGGGGGGCCCTCACAGCCTaGCCTTGCTCAGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PLGLVLLPDLFNLLLHHGGALTA*PCSEVL
Trigger: CAAAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCC...CCCATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTAACTGCCATAATATTTaGCTACATGAGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPNCHNI*LHEGCH
Trigger: GTGACAGCCCTCATGTAGTCAAATATTATGGCAGTT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACTCCTTTGGCACTCCTaGCAAATGGGTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRLLWHS*QMGAAG
Trigger: TCCTGCAGCACCCATTTGTCAGGAGTGCCAAAGGAG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCGCCAAGAGCCTCTTCTaGAGGTCCTCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFAKSLF*RSSTVQ
Trigger: TTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGC...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGCTCCTGGGATTCAGTaGCCCCCTAACAGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAAPGIQ*PPNSLP
Trigger: CGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCGTGGCTGTGGCCCTCTaGTCAGGGCTCTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFVAVAL*SGLFTR
Trigger: TCTTGTAAAGAGCCCTGAGCAGAGGGCCACAGCCAC...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTGGTCCACTTCCCGCTaGTGGGATTCCTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGWSTSR*WDSWRF
Trigger: GAAACGCCAGGAATCCCAGCAGCGGGAAGTGGACCA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAGTACCTGTACAGAGATaGCACCACACTGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAVPVQR*HHTAWG
Trigger: TCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTAC...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGATCGCACAGCAAATGGTaGAGGGGTGTGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRSHSKW*RGVHPG
Trigger: TCCAGGATGCACACCCCTGCACCATTTGCTGTGCGA...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGGGCTGCCGCTTGGACTaGTACTTCTGCCGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRGCRLD*YFCRIS
Trigger: AGAGATCCGGCAGAAGTACCAGTCCAAGCGGCAGCC...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAAAGCCTGGGTGGAGCTaGGGCCCTCACAGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQKPGWS*GPHSLA
Trigger: GGCCAGGCTGTGAGGGCCCCAGCTCCACCCAGGCTT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGAATTCACCCAAAGCCTaGGTGGAGCTGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: CRLDWYFCRISSISCSIMNSPKA*VELGPS
Trigger: TGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATT...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCAGGGGTGTGCATCCTaGATGCTTTGGTTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPQGCAS*MLWFLK
Trigger: TTTTAAAAACCAAAGCATCCAGGATGCACACCCCTG...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAIKMAR*LSREPF
Trigger: GAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGAT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRIKMAR*LSREPF
Trigger: GAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGAT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAAGTCCCTTCCAGCTCTaGCATTCTGTGTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTSPFQL*HSVCSD
Trigger: ATCTGAACACACAGAATGTCAGAGCTGGAAGGGACT...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCCAAATTACAGTATCCTaGGGTGCAACCCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPQITVS*GATQSW
Trigger: CCATGACTGGGTTGCACCTCAGGATACTGTAATTTG...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAGTCACAGGGTTATTGTaGAGTTTAGAGCCTACCCAG +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTVTGLL*SLEPTQ
Trigger: CTGGGTAGGCTCTAAACTTCACAATAACCCTGTGAC...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGCAAGACCAGCCTGACTaGCATGGTGAAACCCCGTCT +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRQDQPD*HGETPS
Trigger: AGACGGGGTTTCACCATGTCAGTCAGGCTGGTCTTG...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCCAGGTCATTGTTTCTTaGAGGCAGAGAACAAGCGAG +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPQVIVS*RQRTSE
Trigger: CTCGCTTGTTCTCTGCCTTCAAGAAACAATGACCTG...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCCAGGGACCAGATGTCTaGTACACAGTTGTATCCAAT +
Preference number: 4 (lower is better)
Translates to: APSWGPGPRASSEGPPLSQGPDV*YTVVSN
Trigger: ATTGGATACAACTGTGTAGCAGACATCTGGTCCCTG...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp CTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCACTGCTCGAACCATCGTaGCAGAATCCATTTCATCCT +
Preference number: 4 (lower is better)
Translates to: LHHGVQGQEPLLKVLHCPLLEPS*QNPFHP
Trigger: AGGATGAAATGGATTCTGGCACGATGGTTCGAGCAG...TGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGTGGCTACTCGGACAGTaGCCATCTCATCACCCACTG +
Preference number: 4 (lower is better)
Translates to: CRLDWYFCRISSISCSIMWLLGQ*PSHHPL
Trigger: CAGTGGGTGATGAGATGGGCACTGTCCGAGTAGCCA...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAGCATCCAGGATGGGCTaGCGCTTGGACTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAASRMG*RLDWYF
Trigger: GAAGTACCAGTCCAAGCGGCAGCCCATCCTGGATGC...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGG +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTTTEQK*WLTNMR
Trigger: CCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGT...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTTCAGGCCCGAAACCTaGCTCCATGGGTGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGFRPET*LHGCLS
Trigger: AGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATCCGGGAGGCGGAGGTTaGAGTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYPGGGG*SEPRSC
Trigger: GCACGATCTTGGCTCACTGCAACCTCCGCCTCCCGG...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: APSWGPGPRASSEGPPLSTEQKC*LTNMRQ
Trigger: TTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGT...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp CTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCATTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LHHGVQGQEPLLKVLHCPFTKVL*RDDRAE
Trigger: TTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAA...TGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACATTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTFTKVL*RDDRAE
Trigger: TTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAA...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGESPSH*RTFLSS
Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTC...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGGAGAGCCCTTCCCACTaGCGCACATTCCTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRESPSH*RTFLSS
Trigger: TGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTC...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTGCAAAGGGGGAGGTTaGCTCCTGGGATTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGCKGGG*LLGFSD
Trigger: GTCACTGAATCCCAGGAGCCAACCTCCCCCTTTGCA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAATTCATCCATCCAATTaGTGGCTTGGGGAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTIHPSN*WLGERD
Trigger: GTCCCTTTCCCCAAGCCACCAATTGGATGGATGAAT...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCACATGGTGCCCAGTTGTaGTGGCAACGTGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAHGAQL*WQRVIV
Trigger: CACGATGACACGTTGCCATCACAACTGGGCACCATG...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCCTCATCCTCTGCATTaGTCACCATGGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGPHPLH*SPWCPV
Trigger: AACTGGGCACCATGGTGATCAATGCAGAGGATGAGG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGATCAAGATGGCACGCTaGCTGTCAAGAGAGCCCTTC +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGIKMAR*LSREPF
Trigger: GAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGAT...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCTCGCTGAAACTGAATaGTCTGGCTCGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGLAETE*SGSSRE
Trigger: TTCCCTGGACGAGCCAGATCATTCAGTTTCAGCGAG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGATTTTGCAAAGCCCTCTaGTCTGCTTCAGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRFCKAL*SASGPK
Trigger: TTTCGGGCCTGAAGCAGATCAGAGGGCTTTGCAAAA...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTGGTCCACTTCCCGCTaGTGGGATTCCTGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAWSTSR*WDSWRF
Trigger: GAAACGCCAGGAATCCCAGCAGCGGGAAGTGGACCA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAGATGGTTTCGCAGGCTaGATGGTCTCATCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGADGFAG*MVSSLL
Trigger: AAGAAGGGATGAGACCATGCAGCCTGCGAAACCATC...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAGATGGTTTCGCAGGCTaGATGGTCTCATCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRDGFAG*MVSSLL
Trigger: AAGAAGGGATGAGACCATGCAGCCTGCGAAACCATC...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGCATCCAGGATGGGCTaGCGCTTGGACTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAASRMG*RLDWYF
Trigger: GAAGTACCAGTCCAAGCGGCAGCCCATCCTGGATGC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCGAGATGCCACCACACTaGGTGGGGAATCTATTTATA +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPEMPPH*VGNLFI
Trigger: TATAAATAGATTCCCCACGCAGTGTGGTGGCATCTC...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTTTATCCTTTCCAGGCTaGTTAGCAGTAAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPLSFPG*LAVKEK
Trigger: TTTCTCTTTTACTGCTAAGCAGCCTGGAAAGGATAA...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTACAGTATCCTGAGGTaGAACCCAGTCATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGYSILR*NPVMAP
Trigger: GGGAGCCATGACTGGGTTGCACCTCAGGATACTGTA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAAATGGTGCAGGGGTGTaGATCCTGGATGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRNGAGV*ILDALV
Trigger: AACCAAAGCATCCAGGATGCACACCCCTGCACCATT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGAGCCGGGCGTGGTGGTaGAGCACCTGTAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWSRAWW*STCSGS
Trigger: GCTGCCACTACAGGTGCTGCACCACCACGCCCGGCT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGCGCTGCTGGGATTCCTaGCGTTTCAGTTTCACATCC +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRRCWDS*RFSFTS
Trigger: GGATGTGAAACTGAAACGCCAGGAATCCCAGCAGCG...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCATGGCTCCATCAGTCATaGTGCTGGCTACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAWLHQS*CWLLGQ
Trigger: CTGTCCGAGTAGCCAGCACCATGACTGATGGAGCCA...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGGCTGCCGCTTGGACTaGTACTTCTGCCGGATCTCT +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAGCRLD*YFCRIS
Trigger: AGAGATCCGGCAGAAGTACCAGTCCAAGCGGCAGCC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGGGGCCCTCACAGCCTaGCCTTGCTCAGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAGALTA*PCSEVL
Trigger: CAAAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCCGAAACCTGCCTCCATaGGTGCTTGTCTGCTATATC +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFRNLPP*VLVCYI
Trigger: GATATAGCAGACAAGCACCCATGGAGGCAGGTTTCG...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAAATTCGCACAGCAAATaGTGCAGGGGTGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRNSHSK*CRGVHP
Trigger: AGGATGCACACCCCTGCACCATTTGCTGTGCGAATT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCCTTTCTCCTCCTCTCTaGCCAAGTGCAAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPLSPPL*PSAKFF
Trigger: AAAGAACTTTGCACTTGGCCAGAGAGGAGGAGAAAG...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAAGCAATAGACTTTGTTaGATCAGCAAGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTSNRLC*ISKLGA
Trigger: TGCACCCAGCTTGCTGATCCAACAAAGTCTATTGCT...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACACATTTCATCCTCTTCTaGGTTTTCTTCATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTHFILF*VFFIVL
Trigger: CAGGACGATGAAGAAAACTCAGAAGAGGATGAAATG...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCCATGGTGCCCAGTTGTaGTGGCAACGTGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAHGAQL*WQRVIV
Trigger: CACGATGACACGTTGCCATCACAACTGGGCACCATG...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCGCCAAGAGCCTCTTCTaGAGGTCCTCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAAKSLF*RSSTVQ
Trigger: TTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGC...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACATCTGTGTGTTCAGATTaGGCCTCCTGGAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTSVCSD*ASWKTN
Trigger: ATTTGTTTTCCAGGAGGCTCAATCTGAACACACAGA...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGTCAGTTGCCAAGCCCTaGAGACTAACAACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRSVAKP*RLTTAS
Trigger: AGAGGCAGTTGTTAGTCTTCAGGGCTTGGCAACTGA...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCAAGACCAGCCTGACTaGCATGGTGAAACCCCGTCT +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAQDQPD*HGETPS
Trigger: AGACGGGGTTTCACCATGTCAGTCAGGCTGGTCTTG...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGGGCTCACTGCATCCTTaGCCTCCCTGGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWGSLHP*PPWAQV
Trigger: CACCTGAGCCCAGGGAGGTCAAGGATGCAGTGAGCC...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTGGCTACTCGGACAGTaGCCATCTCATCACCCACTG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAWLLGQ*PSHHPL
Trigger: CAGTGGGTGATGAGATGGGCACTGTCCGAGTAGCCA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCTTGGACTGGTACTTCTaGCGGATCTCTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFLDWYF*RISSIS
Trigger: GGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAA...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCACTGGGCAGTATCTGTaGTGTGACTTTAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFTGQYL*CDFRQL
Trigger: CAACTGCCTAAAGTCACAGCACAGATACTGCCCAGT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCCAAAGCCCTCTGATCTaGTTCAGGCCCGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAQSPLI*FRPETC
Trigger: GCAGGTTTCGGGCCTGAAGCAGATCAGAGGGCTTTG...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCATACAGTATCCTGAGGTaGAACCCAGTCATGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAYSILR*NPVMAP
Trigger: GGGAGCCATGACTGGGTTGCACCTCAGGATACTGTA...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTCGCACAGCAAATGGTaGAGGGGTGTGCATCCTGGA +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRASHSKW*RGVHPG
Trigger: TCCAGGATGCACACCCCTGCACCATTTGCTGTGCGA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGGGCATGGTGGCATATaGTGTAATCCCAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGGHGGI*CNPSRR
Trigger: TCTTCTGCTGGGATTACAGCATATGCCACCATGCCC...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCAGCTCGAGTTCCAAATaGTCAAGCAATAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPSSSSK*SSNNRS
Trigger: GCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCT...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGGCTGCAGGAGCTGAGTaGCTGTGGCCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRAAGAE*LWPSAQ
Trigger: CTGAGCAGAGGGCCACAGCCACTCAGCTCCTGCAGC...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCACGCTGCTGGGATTCCTaGCGTTTCAGTTTCACATCC +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEARCWDS*RFSFTS
Trigger: GGATGTGAAACTGAAACGCCAGGAATCCCAGCAGCG...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTCCACTTCCCGCTGCTaGGATTCCTGGCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKASTSRC*DSWRFS
Trigger: ACTGAAACGCCAGGAATCCCAGCAGCGGGAAGTGGA...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCCATCAGTCATGGTGCTaGCTACTCGGACAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAHQSWC*LLGQCP
Trigger: TGGGCACTGTCCGAGTAGCCAGCACCATGACTGATG...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTGGCTCCATCAGTCATaGTGCTGGCTACTCGGACAG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAWLHQS*CWLLGQ
Trigger: CTGTCCGAGTAGCCAGCACCATGACTGATGGAGCCA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAGTTTCGCAGGCTGCATaGTCTCATCCCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAVSQAA*SHPFFS
Trigger: TGAAAAGAAGGGATGAGACCATGCAGCCTGCGAAAC...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACACAGGGGTGTGCATCCTaGATGCTTTGGTTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTQGCAS*MLWFLK
Trigger: TTTTAAAAACCAAAGCATCCAGGATGCACACCCCTG...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATCCATCCAATTGGTaGCTTGGGGAAAGGGACAAA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAHPSNW*LGERDK
Trigger: TTTGTCCCTTTCCCCAAGCCACCAATTGGATGGATG...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAAAGGAGTGGGGGCAATaGAGGAAGCTATGTCTCATA +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRKEWGQ*RKLCLI
Trigger: TATGAGACATAGCTTCCTCCATTGCCCCCACTCCTT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AAACACTTCCCAAGTGCTCTCCACTCATCCTGGTCTGGAGCTTTGGCTCTACTCGCTCTCCACTCATCCTaGTCTGGAGCTTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: KHFPSALHSSWSGALALLALHSS*SGALAL
Trigger: TAGAGCCAAAGCTCCAGACCAGGATGAGTGGAGAGC...GAGTAGAGCCAAAGCTCCAGACCAGGATGAGTGGAGAGCACTTGGGAAGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGTATCTCCTGGAGGTCTaGTTCCACAGGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: CRLDWYFCRISSISCSIMYLLEV*FHRNLL
Trigger: AAGCAAGTTCCTGTGGAATCAGACCTCCAGGAGATA...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp CATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAACTCTTCATTTCATCCTCTTCTaGGTTTTCTTCATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HGVQGQEPLLKVLHCPTLHFILF*VFFIVL
Trigger: CAGGACGATGAAGAAAACTCAGAAGAGGATGAAATG...AAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACATCTTGCCAAAGCTGTTaGTCTGGTTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTSCQSC*SGFPFL
Trigger: AAGAAAAGGAAAACCAGATCAACAGCTTTGGCAAGA...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRATGAHS*VHKGAV
Trigger: CACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGT...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAGAGAGTGGAGATGGATaGAAGGCATTGAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAESGDG*KALKEQ
Trigger: TTGCTCTTTCAATGCCTTTCATCCATCTCCACTCTC...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTTTTCCTTTGTGGACTaGACACAGTCCCGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGFSFVD*TQSRVC
Trigger: GCAAACACGGGACTGTGTTCAGTCCACAAAGGAAAA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCAAATTACAGTATCCTaGGGTGCAACCCAGTCATGG +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGQITVS*GATQSW
Trigger: CCATGACTGGGTTGCACCTCAGGATACTGTAATTTG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCAAGCCCAAGGCTCATTaGAAGCAAGCTGACATATCT +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFKPKAH*KQADIS
Trigger: AGATATGTCAGCTTGCTTTCAATGAGCCTTGGGCTT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGCAGGTCATTGTTTCTTaGAGGCAGAGAACAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRQVIVS*RQRTSE
Trigger: CTCGCTTGTTCTCTGCCTTCAAGAAACAATGACCTG...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGCAGAAGACCTGGATCTaGATCATGGCTCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRQKTWI*IMALPY
Trigger: ATATGGCAGAGCCATGATTCAGATCCAGGTCTTCTG...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCACTGCTGACCTCAATTaGTTACTTACATCCAAACCT +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPTADLN*LLTSKP
Trigger: AGGTTTGGATGTAAGTAATCAATTGAGGTCAGCAGT...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTCCGTCTCCATGGCGCTaGCAGCAGCCGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFPSPWR*QQPPRP
Trigger: GGGTCTGGGCGGCTGCTGGCAGCGCCATGGAGACGG...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCTCCAACTTTTTCAGCTaGCGGCGCGGCGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSSNFFS*RRGGFL
Trigger: GAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGA...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGTCCAACTTTTTCAGCTaGCGGCGCGGCGGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRSNFFS*RRGGFL
Trigger: GAGGAACCCGCCGCGCCGGCAGCTGAAAAAGTTGGA...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCGATTCCACAGGAACTTaGTTAATAGCAACAATCTGG +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPDSTGT*LIATIW
Trigger: CCAGATTGTTGCTATTAAGCAAGTTCCTGTGGAATC...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCAGGAATCATGAAGATTaGCCTCATTGGATGGATATC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPRNHED*PHWMDI
Trigger: GATATCCATCCAATGAGGGCAATCTTCATGATTCCT...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCATCTCATCACCCACTaGTCGAACCATCGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAHLITH*SNHRAR
Trigger: TCTGGCACGATGGTTCGAGCAGTGGGTGATGAGATG...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAGGCAACGTGTCATCGTaGTCAATCATAGTATTGGCT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRGNVSS*SIIVLA
Trigger: AGCCAATACTATGATTGAGCACGATGACACGTTGCC...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAGAGATGCCACCACACTaGGTGGGGAATCTATTTATA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAEMPPH*VGNLFI
Trigger: TATAAATAGATTCCCCACGCAGTGTGGTGGCATCTC...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAAGGAAGATGGCTCTATaGTGTCTTTTGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGARKMAL*CLLQSP
Trigger: AGGGCTTTGCAAAAGACAGCATAGAGCCATCTTCCT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGAAGGAAGATGGCTCTATaGTGTCTTTTGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRRKMAL*CLLQSP
Trigger: AGGGCTTTGCAAAAGACAGCATAGAGCCATCTTCCT...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCTACCCAGCTCAGTaGCTGATATATAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGAYPAQ*LIYNRC
Trigger: GCACCTATTATATATCAGGCACTGAGCTGGGTAGGC...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAAATGGTGCAGGGGTGTaGATCCTGGATGCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEANGAGV*ILDALV
Trigger: AACCAAAGCATCCAGGATGCACACCCCTGCACCATT...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACCAAGTTGGTCCGAGTaGAAGCTGGTAAAAGAGATT +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAPSWSE*KLVKEI
Trigger: AATCTCTTTTACCAGCTTGCACTCGGACCAACTTGG...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCCGCTGCTGGGATTCCTaGCGTTTCAGTTTCACATCC +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKARCWDS*RFSFTS
Trigger: GGATGTGAAACTGAAACGCCAGGAATCCCAGCAGCG...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGGTTTCGCAGGCTGCATaGTCTCATCCCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: CRLDWYFCRISSISCSIMVSQAA*SHPFFS
Trigger: TGAAAAGAAGGGATGAGACCATGCAGCCTGCGAAAC...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAATTCACCCAAAGCCTaGGTGGAGCTGGGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDNSPKA*VELGPS
Trigger: TGAGGGCCCCAGCTCCACCCAGGCTTTGGGTGAATT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAACAGAGCAGAAGTGCTaGCTAACAAACATGAGGCAA +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGATEQKC*LTNMRQ
Trigger: TTGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCCAACTCTTAAGCATGTaGTTTCTCAGAAAGCGTATC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPQLLSM*FLRKRI
Trigger: GATACGCTTTCTGAGAAACCACATGCTTAAGAGTTG...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCTATTCCGCTTGGCCATaGTATCCGTTTTATTTCGTA +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPYSAWP*YPFYFV
Trigger: TACGAAATAAAACGGATACCATGGCCAAGCGGAATA...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000499879.6
3UTR CAA 72 bp ATCTGCTTCAGGCCCGAAACCTGCCTCCATGGGTGCTaGTCTGCTATATCTGGTAGATGTTGTGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: ICFRPETCLHGC*SAISGRCCGAQ
Trigger: TTGAGCTCCACAACATCTACCAGATATAGCAGACAAGCACCCATGGAGGCAGGTTTCGGGCCTGAAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAATGGTATCTGTAAGTTaGCCTGCTACCCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAMVSVS*PATPKS
Trigger: AGATTTTGGGGTAGCAGGTCAACTTACAGATACCAT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372801.5
ENST00000372806.8
CDS-3UTR TCA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCTGGTATTTTCCAATCTaGAGAATTTTTCAGTGGACC +
Preference number: 4 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPWYFPI*RIFQWT
Trigger: GGTCCACTGAAAAATTCTTCAGATTGGAAAATACCA...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAATGACCACACAAGGCTaGAACCACGGTACAAGAACT +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAMTTQG*NHGTRT
Trigger: AGTTCTTGTACCGTGGTTTCAGCCTTGTGTGGTCAT...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATCTCGCTGAAACTGAATaGTCTGGCTCGTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYLAETE*SGSSRE
Trigger: TTCCCTGGACGAGCCAGATCATTCAGTTTCAGCGAG...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACATTTACTAGCTGCATaGCCTTGGGAAGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRHLLAA*PWEGIF
Trigger: AAAGATTCCTTCCCAAGGTCATGCAGCTAGTAAATG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGG +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEATTEQK*WLTNMR
Trigger: CCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGT...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGAGATGCCACCACACTaGGTGGGGAATCTATTTATA +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGEMPPH*VGNLFI
Trigger: TATAAATAGATTCCCCACGCAGTGTGGTGGCATCTC...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCAAAGCCCTCTGATCTaGTTCAGGCCCGAAACCTGC +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDQSPLI*FRPETC
Trigger: GCAGGTTTCGGGCCTGAAGCAGATCAGAGGGCTTTG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATAGCTATTTCAGTTaGCAAGCCCTGAAGACTAAC +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAHSYFS*QALKTN
Trigger: GTTAGTCTTCAGGGCTTGGCAACTGAAATAGCTATG...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCATCAGTCATGGTGCTaGCTACTCGGACAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDHQSWC*LLGQCP
Trigger: TGGGCACTGTCCGAGTAGCCAGCACCATGACTGATG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAGTGCCAGGCTTCTCCTaGGACTCAAAGAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAVPGFS*DSKSKH
Trigger: ATGTTTACTCTTTGAGTCCCAGGAGAAGCCTGGCAC...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCTTTCTCCTCCTCTCTaGCCAAGTGCAAAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGLSPPL*PSAKFF
Trigger: AAAGAACTTTGCACTTGGCCAGAGAGGAGGAGAAAG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACACAGCAGGTTTCCCTaGCAATTTTGGATACATATG +
Preference number: 4 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAHSRFP*QFWIHM
Trigger: CATATGTATCCAAAATTGCCAGGGAAACCTGCTGTG...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CCA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACAGCTTTAGTTCACAGATaGAGAGCCGAGTTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GLELWLYSATDPYDPHNTALVHR*RAEFQP
Trigger: GGGCTGGAACTCGGCTCTCCATCTGTGAACTAAAGC...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCATGGCCGGTCTCTTTATaGATAGCTTTGTATACGCTG +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAWPVSL*IALYTL
Trigger: CAGCGTATACAAAGCTATTCATAAAGAGACCGGCCA...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTATCTCCTGGAGGTCTaGTTCCACAGGAACTTGCTT +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAYLLEV*FHRNLL
Trigger: AAGCAAGTTCCTGTGGAATCAGACCTCCAGGAGATA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGAACTGCCATAATATTTaGCTACATGAGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: CRLDWYFCRISSISCSIMNCHNI*LHEGCH
Trigger: GTGACAGCCCTCATGTAGTCAAATATTATGGCAGTT...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGATGGTATCTGTAAGTTaGCCTGCTACCCCAAAATCT +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGMVSVS*PATPKS
Trigger: AGATTTTGGGGTAGCAGGTCAACTTACAGATACCAT...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372801.5
ENST00000372806.8
CDS-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGCTCCTTTGGCACTCCTaGCAAATGGGTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWLLWHS*QMGAAG
Trigger: TCCTGCAGCACCCATTTGTCAGGAGTGCCAAAGGAG...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCTCTTGCCAAAGCTGTTaGTCTGGTTTTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFSCQSC*SGFPFL
Trigger: AAGAAAAGGAAAACCAGATCAACAGCTTTGGCAAGA...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAACTCTTTGGTATTTTCCAATCTaGAGAATTTTTCAGTGGACC +
Preference number: 4 (lower is better)
Translates to: HGVQGQEPLLKVLHCPTLWYFPI*RIFQWT
Trigger: GGTCCACTGAAAAATTCTTCAGATTGGAAAATACCA...AAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGCAGTCCCGTGTTTGCTaGGAGTCCCTGGTAGAGATC +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWQSRVC*ESLVEI
Trigger: GATCTCTACCAGGGACTCTCAGCAAACACGGGACTG...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCCAGAAGACCTGGATCTaGATCATGGCTCTGCCATAT +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAQKTWI*IMALPY
Trigger: ATATGGCAGAGCCATGATTCAGATCCAGGTCTTCTG...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCAGTGAGCCGAGATTGTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSSEPRL*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGTCACAATCTCGGCTCACT...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCACAGGGACCAGATGTCTaGTACACAGTTGTATCCAAT +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAQGPDV*YTVVSN
Trigger: ATTGGATACAACTGTGTAGCAGACATCTGGTCCCTG...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAGGCAACGTGTCATCGTaGTCAATCATAGTATTGGCT +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAGNVSS*SIIVLA
Trigger: AGCCAATACTATGATTGAGCACGATGACACGTTGCC...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATGGGCATGGTGGCATATaGTGTAATCCCAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYGHGGI*CNPSRR
Trigger: TCTTCTGCTGGGATTACAGCATATGCCACCATGCCC...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CAGCCCCCAACTTCATGCAGGAAGCTCAAATGCAATCTCCTGACAAGGATAAGGCAGCCCCCAACTTCATaGAGGAAGCTCAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: QPPTSCRKLKCNLLTRIRQPPTS*RKLKCN
Trigger: ATTGCATTTGAGCTTCCTGCATGAAGTTGGGGGCTG...CCTTATCCTTGTCAGGAGATTGCATTTGAGCTTCCTGCATGAAGTTGGGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCACTCAAAGCTTTCCCTTaGACATCACCAATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEALKAFP*TSPIAP
Trigger: TGGAGCTATTGGTGATGTCCAAGGGAAAGCTTTGAG...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGTTGGATCAGCAAGCTaGGTGCACACATTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAVGSAS*VHTFLK
Trigger: TTTCAGGAATGTGTGCACCCAGCTTGCTGATCCAAC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGGACCTCAAATTTCTCTaGAAGCTCGAGTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRDLKFL*KLEFQM
Trigger: CATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTC...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCAAGGAGTGGGGGCAATaGAGGAAGCTATGTCTCATA +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAKEWGQ*RKLCLI
Trigger: TATGAGACATAGCTTCCTCCATTGCCCCCACTCCTT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 72 bp AGATGGATGAAAGGCATTGAAAGAGCAAAGGCCAATTaGCAAAGAGGGTGCCAGGCTTCTCCTGGGACTCAA +
Preference number: 4 (lower is better)
Translates to: RWMKGIERAKAN*QRGCQASPGTQ
Trigger: TTGAGTCCCAGGAGAAGCCTGGCACCCTCTTTGCAAATTGGCCTTTGCTCTTTCAATGCCTTTCATCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTGGCCGGTCTCTTTATaGATAGCTTTGTATACGCTG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAWPVSL*IALYTL
Trigger: CAGCGTATACAAAGCTATTCATAAAGAGACCGGCCA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGCCTCATCCTCTGCATTaGTCACCATGGTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRPHPLH*SPWCPV
Trigger: AACTGGGCACCATGGTGATCAATGCAGAGGATGAGG...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGGGTCCAGAAAGAACAATTaGAAGCTATTGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PLGLVLLPDLFNLLLHHGSRKNN*KLLGEE
Trigger: TTCTTCTCCCAATAGCTTTCAATTGTTCTTTCTGGA...CCCATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGATGGATGAAAGGCATTaGAAGAGCAAAGGCCAATTT +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGMDERH*KSKGQF
Trigger: AAATTGGCCTTTGCTCTTTCAATGCCTTTCATCCAT...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGAAACAGTCACATATTTaGACGTGGGTCACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGKQSHI*TWVTKA
Trigger: TGCTTTTGTGACCCACGTTCAAATATGTGACTGTTT...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATCAGTTGCCAAGCCCTaGAGACTAACAACTGCCTCT +
Preference number: 4 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQSVAKP*RLTTAS
Trigger: AGAGGCAGTTGTTAGTCTTCAGGGCTTGGCAACTGA...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGGATTCCACAGGAACTTaGTTAATAGCAACAATCTGG +
Preference number: 4 (lower is better)
Translates to: CRLDWYFCRISSISCSIMDSTGT*LIATIW
Trigger: CCAGATTGTTGCTATTAAGCAAGTTCCTGTGGAATC...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGCTCAGAAGTTTTGTTaGCGTCTCTTCTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAAQKFC*RLFLAS
Trigger: AGAGGCTAAGAAGAGACGGCAACAAAACTTCTGAGC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAACCTGCCTCCATGGGTaGTTGTCTGCTATATCTGGT +
Preference number: 4 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQTCLHG*LSAISG
Trigger: ACCAGATATAGCAGACAAGCACCCATGGAGGCAGGT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCTCCTCTCTGGCCAAGTaGAAAGTTCTTTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TSRWHADCQESPSHWRTFSSLAK*KVLCLK
Trigger: TTTTAAACAAAGAACTTTGCACTTGGCCAGAGAGGA...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGGGATGTCTTTTCCAGACTaGTGTTCTTGGCTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PLGLVLLPDLFNLLLHHGMSFPD*CSWLVL
Trigger: TAAAACTAGCCAAGAACAGCAGTCTGGAAAAGACAT...CCCATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATACAATTAACCAAGACTaGCACAGGTCTCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDTINQD*HRSLPP
Trigger: TGGGGGAAGAGACCTGTGTCAGTCTTGGTTAATTGT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCAAGTCTTAAAGAATTCTaGGATTTTTGGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: KVLWRDDRAEVLANKHEASLKEF*DFWPGK
Trigger: CTTGCCTGGCCAAAAATCTCAGAATTCTTTAAGACT...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAAAGCAATTTGGGAGGCTaGGGCAGGCAGATCACAAGA +
Preference number: 4 (lower is better)
Translates to: NLDQNTLHTSLCILIARKSNLGG*GRQITR
Trigger: TCTTGTGATCTGCCTGCCTCAGCCTCCCAAATTGCT...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp CCACAGATCCATATGATCCTCATAACACAGAATGATTGCAGCCTCCAGAATCCAGTGCTAGGCTCCACTTaGAAACACTTCCCAAGTGCT +
Preference number: 4 (lower is better)
Translates to: PQIHMILITQNDCSLQNPVLGST*KHFPSA
Trigger: AGCACTTGGGAAGTGTTTTCAAGTGGAGCCTAGCAC...TGGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGGATCATATGGATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCATCTGTAAGTTGACCTaGTACCCCAAAATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAICKLT*YPKICK
Trigger: CTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGAT...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372801.5
ENST00000372806.8
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGGATGGTTTCGCAGGCTaGATGGTCTCATCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWDGFAG*MVSSLL
Trigger: AAGAAGGGATGAGACCATGCAGCCTGCGAAACCATC...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGCTGAGTTCACAAAGGTaGTGTGGAGAGACGACAGAG +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRLSSQR*CGETTE
Trigger: CTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAG...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCAACCTAATTTTTAAATaGAGCCCTGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKANLIFK*SPAKGE
Trigger: CTCCCCCTTTGCAGGGCTGCATTTAAAAATTAGGTT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAAAGAGGCACATTCCCTaGCTTTCCATTGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQKRHIP*LSIDSQ
Trigger: CTGGGAATCAATGGAAAGGCAGGGAATGTGCCTCTT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGTCCTCTCTGGCCAAGTaGAAAGTTCTTTGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRSSLAK*KVLCLK
Trigger: TTTTAAACAAAGAACTTTGCACTTGGCCAGAGAGGA...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGAATTCGCACAGCAAATaGTGCAGGGGTGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRNSHSK*CRGVHP
Trigger: AGGATGCACACCCCTGCACCATTTGCTGTGCGAATT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGAAAGATGGGGTGAGGTaGAGATGTAGATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWKDGVR*RCRLGR
Trigger: CCTGCCCAATCTACATCTCCACCTCACCCCATCTTT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AACACAGTGAGACCTCGTCTCTTTAATGATGCCAGTCAACTGGCAGTCTTCAGAGGCAGGGATAGGGGGTaGTTAGAAGATTTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: NTVRPRLFNDASQLAVFRGRDRG*LEDFSN
Trigger: ATTGCTGAAATCTTCTAACCACCCCCTATCCCTGCC...TCTGAAGACTGCCAGTTGACTGGCATCATTAAAGAGACGAGGTCTCACTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATAACTGCCATAATATTTaGCTACATGAGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYNCHNI*LHEGCH
Trigger: GTGACAGCCCTCATGTAGTCAAATATTATGGCAGTT...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCCATGGTGCCCAGTTGTaGTGGCAACGTGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFHGAQL*WQRVIV
Trigger: CACGATGACACGTTGCCATCACAACTGGGCACCATG...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCGCCAAGAGCCTCTTCTaGAGGTCCTCCACTGTCCAA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFAKSLF*RSSTVQ
Trigger: TTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGC...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGGTCACAGGGTTATTGTaGAGTTTAGAGCCTACCCAG +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRVTGLL*SLEPTQ
Trigger: CTGGGTAGGCTCTAAACTTCACAATAACCCTGTGAC...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCAGTCTTAAAGAATTCTaGGATTTTTGGCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKASLKEF*DFWPGK
Trigger: CTTGCCTGGCCAAAAATCTCAGAATTCTTTAAGACT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACAATGGGAAGAAAGATCTaGAGCTTTGTTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLELWLYSATDPYDPHNTMGRKI*SFVFSL
Trigger: CAGGGAGAAAACAAAGCTTCAGATCTTTCTTCCCAT...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp AAACACTTCCCAAGTGCTCTCCACTCATCCTGGTCTGGAGCTTTGGCTCTACTCTGCTTTAGTCTCCGCTaGTTATTTAGATTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KHFPSALHSSWSGALALLCFSLR*LFRFLS
Trigger: GGAAAGAAATCTAAATAATCAGCGGAGACTAAAGCA...GAGTAGAGCCAAAGCTCCAGACCAGGATGAGTGGAGAGCACTTGGGAAGTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCGATTCCACAGGAACTTaGTTAATAGCAACAATCTGG +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRADSTGT*LIATIW
Trigger: CCAGATTGTTGCTATTAAGCAAGTTCCTGTGGAATC...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATATCTGTAAGTTGACCTaGTACCCCAAAATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYICKLT*YPKICK
Trigger: CTTGCAGATTTTGGGGTAGCAGGTCAACTTACAGAT...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000372806.8
CDS-3UTR GCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAACAGGGACCAGATGTCTaGTACACAGTTGTATCCAAT +
Preference number: 4 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQQGPDV*YTVVSN
Trigger: ATTGGATACAACTGTGTAGCAGACATCTGGTCCCTG...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGTTGGACTGGTACTTCTaGCGGATCTCTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWLDWYF*RISSIS
Trigger: GGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAA...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATGCTCAGAAGTTTTGTTaGCGTCTCTTCTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDAQKFC*RLFLAS
Trigger: AGAGGCTAAGAAGAGACGGCAACAAAACTTCTGAGC...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGACGACAGAGCAGAAGTaGTGGCTAACAAACATGAGG +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRTTEQK*WLTNMR
Trigger: CCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCGTACCTGTACAGAGATaGCACCACACTGCGTGGGGA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFVPVQR*HHTAWG
Trigger: TCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTAC...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGACTGGGCAGTATCTGTaGTGTGACTTTAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWTGQYL*CDFRQL
Trigger: CAACTGCCTAAAGTCACAGCACAGATACTGCCCAGT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGGCCTACCCAGCTCAGTaGCTGATATATAATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWAYPAQ*LIYNRC
Trigger: GCACCTATTATATATCAGGCACTGAGCTGGGTAGGC...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTGAGACCATGGCTCACTaGATCCTTGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFETMAH*ILDLPG
Trigger: CCCAGGGAGGTCAAGGATGCAGTGAGCCATGGTCTC...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCGGCACTCCTGACAAATaGGTGCTGCAGGAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFGTPDK*VLQELS
Trigger: ACTCAGCTCCTGCAGCACCCATTTGTCAGGAGTGCC...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTGGGGCCCTCACAGCCTaGCCTTGCTCAGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFGALTA*PCSEVL
Trigger: CAAAACTTCTGAGCAAGGCCAGGCTGTGAGGGCCCC...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGGTGCCAGGCTTCTCCTaGGACTCAAAGAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRVPGFS*DSKSKH
Trigger: ATGTTTACTCTTTGAGTCCCAGGAGAAGCCTGGCAC...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGAACGCTTTTCCTTTGTaGACTGAACACAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWNAFPL*TEHSPV
Trigger: CACGGGACTGTGTTCAGTCCACAAAGGAAAAGCGTT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGAACGCTTTTCCTTTGTaGACTGAACACAGTCCCGTG +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRNAFPL*TEHSPV
Trigger: CACGGGACTGTGTTCAGTCCACAAAGGAAAAGCGTT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGATCCAATTGGTGGCTTaGGGAAAGGGACAAAAAGGG +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWIQLVA*GKGQKG
Trigger: CCCTTTTTGTCCCTTTCCCCAAGCCACCAATTGGAT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCACAGATCCATATGATCCTCATAACACAGAATGATTGCAGCCTCCAGAATCCAAAAATAAGTCGGGCGTaGTGGTGTGTGCCTATAGTC +
Preference number: 4 (lower is better)
Translates to: PQIHMILITQNDCSLQNPKISRA*WCVPIV
Trigger: GACTATAGGCACACACCACCACGCCCGACTTATTTT...TGGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGGATCATATGGATCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATTCTGTGTGTTCAGATTaGGCCTCCTGGAAAACAAAT +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDSVCSD*ASWKTN
Trigger: ATTTGTTTTCCAGGAGGCTCAATCTGAACACACAGA...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCATTTACTAGCTGCATaGCCTTGGGAAGGAATCTTT +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDHLLAA*PWEGIF
Trigger: AAAGATTCCTTCCCAAGGTCATGCAGCTAGTAAATG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTCTCATACAAACTGCTaGCCTCAATTGATTACTTAC +
Preference number: 4 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRASHTNC*PQLITY
Trigger: GTAAGTAATCAATTGAGGTCAGCAGTTTGTATGAGA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAACCTCATAACACAGAATaGTTGCAGCCTCCAGAATCC +
Preference number: 4 (lower is better)
Translates to: NLDQNTLHTSLCILIARKPHNTE*LQPPES
Trigger: GGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGG...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCATGGCTACTCGGACAGTaGCCATCTCATCACCCACTG +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYAWLLGQ*PSHHPL
Trigger: CAGTGGGTGATGAGATGGGCACTGTCCGAGTAGCCA...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCATAGCTATTTCAGTTaGCAAGCCCTGAAGACTAAC +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDHSYFS*QALKTN
Trigger: GTTAGTCTTCAGGGCTTGGCAACTGAAATAGCTATG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAGTGAGCCAAGATCGTaGCATTGTACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFSEPRS*HCTPAW
Trigger: CCAGGCTGGAGTACAATGGCACGATCTTGGCTCACT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACGAGACCATGGCTCACTaGATCCTTGACCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHETMAH*ILDLPG
Trigger: CCCAGGGAGGTCAAGGATGCAGTGAGCCATGGTCTC...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGCCAAGTTGGTCCGAGTaGAAGCTGGTAAAAGAGATT +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWPSWSE*KLVKEI
Trigger: AATCTCTTTTACCAGCTTGCACTCGGACCAACTTGG...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCATCCACTTCCCGCTGCTaGGATTCCTGGCGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYASTSRC*DSWRFS
Trigger: ACTGAAACGCCAGGAATCCCAGCAGCGGGAAGTGGA...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCTATGGCATCCAGGATaGGCTGCCGCTTGGACTGGT +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHLWHPG*AAAWTG
Trigger: ACCAGTCCAAGCGGCAGCCCATCCTGGATGCCATAG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCATGCAAAGGGGGAGGTTaGCTCCTGGGATTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYACKGGG*LLGFSD
Trigger: GTCACTGAATCCCAGGAGCCAACCTCCCCCTTTGCA...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAGACCTCAAATTTCTCTaGAAGCTCGAGTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQDLKFL*KLEFQM
Trigger: CATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTC...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAGCCTCCTGACAAGCTaGGATTACAGGTGTGCACCA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFSLLTS*DYRCAP
Trigger: TGGTGCACACCTGTAATCCCAGCTTGTCAGGAGGCT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCTCCTTTGGCACTCCTaGCAAATGGGTGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHLLWHS*QMGAAG
Trigger: TCCTGCAGCACCCATTTGTCAGGAGTGCCAAAGGAG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATAAACAGTCACATATTTaGACGTGGGTCACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDKQSHI*TWVTKA
Trigger: TGCTTTTGTGACCCACGTTCAAATATGTGACTGTTT...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGACCTGGCTAATATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWTWLIW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATATTAGCCAGGT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGACCTGGCTAATATGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRTWLIW*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCATATTAGCCAGGT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATCGCTTCTCTCCTTCCTaGTATTTAAAAGACTTACTG +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDRFSPS*YLKDLL
Trigger: CAGTAAGTCTTTTAAATATCAGGAAGGAGAGAAGCG...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAACTCACTCAGCAATCTTaGCCAGAACACTCTTCATAC +
Preference number: 4 (lower is better)
Translates to: NLDQNTLHTSLCILIARKLTQQS*PEHSSY
Trigger: GTATGAAGAGTGTTCTGGTCAAGATTGCTGAGTGAG...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCACATCTCATCACCCACTaGTCGAACCATCGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYAHLITH*SNHRAR
Trigger: TCTGGCACGATGGTTCGAGCAGTGGGTGATGAGATG...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCACCTGCCTCCATGGGTaGTTGTCTGCTATATCTGGT +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFTCLHG*LSAISG
Trigger: ACCAGATATAGCAGACAAGCACCCATGGAGGCAGGT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGAGCTCGAGTTCCAAATaGTCAAGCAATAACAGAAGC +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRSSSSK*SSNNRS
Trigger: GCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCTGCAGGAAGCTCAAATaGAATCTCCTGACAAGGATA +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSCRKLK*NLLTRI
Trigger: TATCCTTGTCAGGAGATTGCATTTGAGCTTCCTGCA...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAAAGATGGGGTGAGGTaGAGATGTAGATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFKDGVR*RCRLGR
Trigger: CCTGCCCAATCTACATCTCCACCTCACCCCATCTTT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp GAAATTTCCACATTCCTTGCAGAAGACATCCATAGATCTAAAACGCAATTTGTCCCTGGTCTGGAGCTTTaGCTCTACTCTGCCACAGAT +
Preference number: 4 (lower is better)
Translates to: EISTFLAEDIHRSKTQFVPGLEL*LYSATD
Trigger: ATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACCAGG...GACAAATTGCGTTTTAGATCTATGGATGTCTTCTGCAAGGAATGTGGAAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
3UTR CAA 72 bp TACATGAACAATGAGAGCTTCAAAAACGCTTTTCCTTaGTGGACTGAACACAGTCCCGTGTTTGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: YMNNESFKNAFP*WTEHSPVFAES
Trigger: ACTCTCAGCAAACACGGGACTGTGTTCAGTCCACAAAGGAAAAGCGTTTTTGAAGCTCTCATTGTTCATGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACACTGGCGCACATTCCTaGGTTCACAAAGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHTGAHS*VHKGAV
Trigger: CACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCACAATTAACCAAGACTaGCACAGGTCTCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFTINQD*HRSLPP
Trigger: TGGGGGAAGAGACCTGTGTCAGTCTTGGTTAATTGT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCGGAAAAGAAGTGCAGTaGAGGTCTTCCTTCAAAATA +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSGKEVQ*RSSFKI
Trigger: TATTTTGAAGGAAGACCTTCACTGCACTTCTTTTCC...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCCAAGATACAAGTCAGTaGGAGTTCACAAACCATTCA +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSQDTSQ*EFTNHS
Trigger: TGAATGGTTTGTGAACTCTCACTGACTTGTATCTTG...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCTCAATGAATTACAACTaGCAGCAGAGAATGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSSMNYN*QQRMEK
Trigger: CTTCTCCATTCTCTGCTGTCAGTTGTAATTCATTGA...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTCTGAGTTCACAAAGGTaGTGTGGAGAGACGACAGAG +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFLSSQR*CGETTE
Trigger: CTCTGTCGTCTCTCCACAGCACCTTTGTGAACTCAG...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGGAATGTGGAGCAACATaGCACGTGTATGATTTTTAC +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRECGAT*HVYDFY
Trigger: GTAAAAATCATACACGTGGCATGTTGCTCCACATTC...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATTTATCCTTTCCAGGCTaGTTAGCAGTAAAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDLSFPG*LAVKEK
Trigger: TTTCTCTTTTACTGCTAAGCAGCCTGGAAAGGATAA...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCTGTTTGGAAAAGAAGTaGAGTGAAGGTCTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSCLEKK*SEGLPS
Trigger: TGAAGGAAGACCTTCACTGCACTTCTTTTCCAAACA...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp CCACAGATCCATATGATCCTCATAACACAGAATGATTGCAGCCTCCAGAATCCAATAACACAGAATGATTaGAGCCTCCAGAATCCAACA +
Preference number: 4 (lower is better)
Translates to: PQIHMILITQNDCSLQNPITQND*SLQNPT
Trigger: TGTTGGATTCTGGAGGCTGCAATCATTCTGTGTTAT...TGGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGGATCATATGGATCTGTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACAAAACCATGGGCAAGATaGTTTTGTTATCATTCTATG +
Preference number: 4 (lower is better)
Translates to: GLELWLYSATDPYDPHNTKPWAR*FCYHSM
Trigger: CATAGAATGATAACAAAAGCATCTTGCCCATGGTTT...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCACGAAACCTGCCTCCATaGGTGCTTGTCTGCTATATC +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYARNLPP*VLVCYI
Trigger: GATATAGCAGACAAGCACCCATGGAGGCAGGTTTCG...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 72 bp ATTAGAAAGTTCTCTTCATACACTCACTCAGCAATCTaGACCAGAACACTCTTCATACCTCCCTATGCATCC +
Preference number: 4 (lower is better)
Translates to: IRKFSSYTHSAI*TRTLFIPPYAS
Trigger: GGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATTGCTGAGTGAGTGTATGAAGAGAACTTTCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR TCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGTCCAGAAAGAACAATTaGAAGCTATTGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRSRKNN*KLLGEE
Trigger: TTCTTCTCCCAATAGCTTTCAATTGTTCTTTCTGGA...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTATGACCACACAAGGCTaGAACCACGGTACAAGAACT +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFMTTQG*NHGTRT
Trigger: AGTTCTTGTACCGTGGTTTCAGCCTTGTGTGGTCAT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCGAGAGTGGAGATGGATaGAAGGCATTGAAAGAGCAA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFESGDG*KALKEQ
Trigger: TTGCTCTTTCAATGCCTTTCATCCATCTCCACTCTC...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACTTTTGCAAAGCCCTCTaGTCTGCTTCAGGCCCGAAA +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHFCKAL*SASGPK
Trigger: TTTCGGGCCTGAAGCAGATCAGAGGGCTTTGCAAAA...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGTCTCATACAAACTGCTaGCCTCAATTGATTACTTAC +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWSHTNC*PQLITY
Trigger: GTAAGTAATCAATTGAGGTCAGCAGTTTGTATGAGA...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCATTGGACTGGTACTTCTaGCGGATCTCTTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYALDWYF*RISSIS
Trigger: GGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAA...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGCTCTTAACGCTAACTTaGTTTGTGATTTTGGCCATT +
Preference number: 4 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWLLTLT*FVILAI
Trigger: AATGGCCAAAATCACAAAGCAAGTTAGCGTTAAGAG...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATACAAGTCAGTGAGAGTTCACAAACCATTCATCCTCCCGAACAATTTAAGAATAAAACACTTCCCAAGTaGTCTCCACTCATCCTGGTC +
Preference number: 4 (lower is better)
Translates to: IQVSESSQTIHPPEQFKNKTLPK*SPLILV
Trigger: GACCAGGATGAGTGGAGAGCACTTGGGAAGTGTTTT...ATTCTTAAATTGTTCGGGAGGATGAATGGTTTGTGAACTCTCACTGACTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCCCTGATTCCATATACTaGATCTACAGTAATCTGAAG +
Preference number: 4 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSPDSIY*IYSNLK
Trigger: CTTCAGATTACTGTAGATGCAGTATATGGAATCAGG...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CCA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCAGTTTCGCAGGCTGCATaGTCTCATCCCTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: IQLSFQPKNASSSYLVYAVSQAA*SHPFFS
Trigger: TGAAAAGAAGGGATGAGACCATGCAGCCTGCGAAAC...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTTTCACAAAGGTGCTGTaGAGAGACGACAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFFTKVL*RDDRAE
Trigger: TTCTGCTCTGTCGTCTCTCCACAGCACCTTTGTGAA...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGAATGGTATAAATTTCTaGCATCTGGCAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRNGINF*HLAGAK
Trigger: TTTAGCACCTGCCAGATGCCAGAAATTTATACCATT...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ATACAAGTCAGTGAGAGTTCACAAACCATTCATCCTCCCGAACAATTTAAGAATCTTCCCTTCTCTGCTTaGTTTCTTGCTGGATTCCAA +
Preference number: 4 (lower is better)
Translates to: IQVSESSQTIHPPEQFKNLPFSA*FLAGFQ
Trigger: TTGGAATCCAGCAAGAAATCAAGCAGAGAAGGGAAG...ATTCTTAAATTGTTCGGGAGGATGAATGGTTTGTGAACTCTCACTGACTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAACCTAATTTTTAAATaGAGCCCTGCAAAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFNLIFK*SPAKGE
Trigger: CTCCCCCTTTGCAGGGCTGCATTTAAAAATTAGGTT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACAAGAGGCACATTCCCTaGCTTTCCATTGATTCCCAG +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHKRHIP*LSIDSQ
Trigger: CTGGGAATCAATGGAAAGGCAGGGAATGTGCCTCTT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCTCACTGTATTCCGCTTaGCCATGGTATCCGTTTTAT +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFSLYSA*PWYPFY
Trigger: ATAAAACGGATACCATGGCCAAGCGGAATACAGTGA...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499879.6
3UTR CAA 72 bp GTAGCTGTCATTTATTATTCCAGCAAGATCCTCAAATaGTCCTCTGTTTTCCGTATCCGCCACATAGCTATT +
Preference number: 4 (lower is better)
Translates to: VAVIYYSSKILK*SSVFRIRHIAI
Trigger: AATAGCTATGTGGCGGATACGGAAAACAGAGGACAATTTGAGGATCTTGCTGGAATAATAAATGACAGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACTGGCCGGTCTCTTTATaGATAGCTTTGTATACGCTG +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHWPVSL*IALYTL
Trigger: CAGCGTATACAAAGCTATTCATAAAGAGACCGGCCA...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTCATTTCATCCTCTTCTaGGTTTTCTTCATCGTCCTG +
Preference number: 4 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFHFILF*VFFIVL
Trigger: CAGGACGATGAAGAAAACTCAGAAGAGGATGAAATG...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAGGAATCATGAAGATTaGCCTCATTGGATGGATATC +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFRNHED*PHWMDI
Trigger: GATATCCATCCAATGAGGGCAATCTTCATGATTCCT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACGGCAACGTGTCATCGTaGTCAATCATAGTATTGGCT +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHGNVSS*SIIVLA
Trigger: AGCCAATACTATGATTGAGCACGATGACACGTTGCC...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCGAATGTGGAGCAACATaGCACGTGTATGATTTTTAC +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFECGAT*HVYDFY
Trigger: GTAAAAATCATACACGTGGCATGTTGCTCCACATTC...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp ATACAAGTCAGTGAGAGTTCACAAACCATTCATCCTCCCGAACAATTTAAGAATCTTCATACCTCCCTATaGATCCTGATAGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: IQVSESSQTIHPPEQFKNLHTSL*ILIARK
Trigger: TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAG...ATTCTTAAATTGTTCGGGAGGATGAATGGTTTGTGAACTCTCACTGACTTGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCTCAAAGCTTTCCCTTaGACATCACCAATAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHLKAFP*TSPIAP
Trigger: TGGAGCTATTGGTGATGTCCAAGGGAAAGCTTTGAG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACAGCAATAGACTTTGTTaGATCAGCAAGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHSNRLC*ISKLGA
Trigger: TGCACCCAGCTTGCTGATCCAACAAAGTCTATTGCT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR TCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCTCCAGAAAGAACAATTaGAAGCTATTGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFSRKNN*KLLGEE
Trigger: TTCTTCTCCCAATAGCTTTCAATTGTTCTTTCTGGA...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CCA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAATGGTATAAATTTCTaGCATCTGGCAGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: INVSWIEIYSLKESRLQFNGINF*HLAGAK
Trigger: TTTAGCACCTGCCAGATGCCAGAAATTTATACCATT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
3UTR CAA 72 bp AAAGATTGTTCACAACACCATTATCCAGGCTATATATaGAGGTTCTCGTTAATAAGGGTTTGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KDCSQHHYPGYI*RFSLIRVCGPK
Trigger: CTTTGGACCACAAACCCTTATTAACGAGAACCTCAATATATAGCCTGGATAATGGTGTTGTGAACAATCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372806.8
CDS-3UTR TCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCGCTTCTCTCCTTCCTaGTATTTAAAAGACTTACTG +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHRFSPS*YLKDLL
Trigger: CAGTAAGTCTTTTAAATATCAGGAAGGAGAGAAGCG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR GCA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACAGGAATCATGAAGATTaGCCTCATTGGATGGATATC +
Preference number: 4 (lower is better)
Translates to: PQLITYIQTLQNSISSQHRNHED*PHWMDI
Trigger: GATATCCATCCAATGAGGGCAATCTTCATGATTCCT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS GCA 90 bp GCTGCCGGCGCGGCGGGTTCCTCAGCTGTACCGTCTCCATGGCGCTaGCAGCAGCCGCCCAGACCCGCTCACTGCTCCATCCTCCCGCGG +
Preference number: 5 (lower is better)
Translates to: AAGAAGSSAVPSPWR*QQPPRPAHCSILPR
Trigger: CCGCGGGAGGATGGAGCAGTGAGCGGGTCTGGGCGGCTGCTGGCAGCGCCATGGAGACGGTACAGCTGAGGAACCCGCCGCGCCGGCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372806.8
ENST00000488618.1
ENST00000499879.6
CDS CCA 90 bp TTTTCAGCTGCCGGCGCGGCGGGTTCCTCAGCTGTACCGTCTCCATaGCGCTGCCAGCAGCCGCCCAGACCCGCTCACTGCTCCATCCTC +
Preference number: 5 (lower is better)
Translates to: FSAAGAAGSSAVPSP*RCQQPPRPAHCSIL
Trigger: GAGGATGGAGCAGTGAGCGGGTCTGGGCGGCTGCTGGCAGCGCCATGGAGACGGTACAGCTGAGGAACCCGCCGCGCCGGCAGCTGAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000488618.1
ENST00000499879.6
CDS-3UTR CAA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAGGATGGGCTGCCGCTaGGACTGGTACTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: APSWGPGPRASSEGPPLSRMGCR*DWYFCR
Trigger: CCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCT...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAAGGATGGGCTGCCGCTaGGACTGGTACTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTRMGCR*DWYFCR
Trigger: CCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCT...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCGCCAAGATCGTGCCATaGTACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPAKIVP*YSSLGD
Trigger: GTCGCCCAGGCTGGAGTACAATGGCACGATCTTGGC...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTTTCCCTGCCTTTCCATaGATTCCCAGGTTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPFPAFP*IPRFQE
Trigger: CTCCTGAAACCTGGGAATCAATGGAAAGGCAGGGAA...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCGGACCAGGTACACTCTaGCCAAAGCTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPGPGTL*PKLLIW
Trigger: CCAGATCAACAGCTTTGGCAAGAGTGTACCTGGTCC...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCAGAGCAAAGGCCAATTaGCAAAGAGGGTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPRAKAN*QRGCQA
Trigger: AGCCTGGCACCCTCTTTGCAAATTGGCCTTTGCTCT...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GGGGGAGGTTGGCTCCTGGGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTAAAAACGCTTTTCCTTaGTGGACTGAACACAGTCCC +
Preference number: 5 (lower is better)
Translates to: GGGWLLGFSDPLTASRCPKNAFP*WTEHSP
Trigger: GGGACTGTGTTCAGTCCACAAAGGAAAAGCGTTTTT...AGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCCCAGGAGCCAACCTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCAGGATGGGCTGCCGCTaGGACTGGTACTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKARMGCR*DWYFCR
Trigger: CCGGCAGAAGTACCAGTCCAAGCGGCAGCCCATCCT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCCATGGTATCTGTAAGTaGACCTGCTACCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: APSWGPGPRASSEGPPLSHGICK*TCYPKI
Trigger: GATTTTGGGGTAGCAGGTCAACTTACAGATACCATG...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCCTCACAGCCTGGCCTaGCTCAGAAGTTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGPHSLA*LRSFVA
Trigger: GGCAACAAAACTTCTGAGCAAGGCCAGGCTGTGAGG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTGGCTCACTGCATCCTaGACCTCCCTGGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAWLTAS*TSLGSG
Trigger: ACCTGAGCCCAGGGAGGTCAAGGATGCAGTGAGCCA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCATGAGGGCTGTCACATaGCTGCATTATAGAGATTTC +
Preference number: 5 (lower is better)
Translates to: APSWGPGPRASSEGPPLSMRAVT*LHYRDF
Trigger: GAAATCTCTATAATGCAGCAATGTGACAGCCCTCAT...GGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp CATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAACTCTTAGTATTGACACTCCTTaGGCACTCCTGACAAATGGG +
Preference number: 5 (lower is better)
Translates to: HGVQGQEPLLKVLHCPTLSIDTP*ALLTNG
Trigger: CCCATTTGTCAGGAGTGCCAAAGGAGTGTCAATACT...AAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCTGCTCAATCATAGTATaGGCTCCATCAGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPCSIIV*APSVMV
Trigger: CACCATGACTGATGGAGCCAATACTATGATTGAGCA...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACATGCTCAATCATAGTATaGGCTCCATCAGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTCSIIV*APSVMV
Trigger: CACCATGACTGATGGAGCCAATACTATGATTGAGCA...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGATTAAGTCTCGCAGTATaGACACTCCTTTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRLSLAV*TLLWHS
Trigger: GGAGTGCCAAAGGAGTGTCAATACTGCGAGACTTAA...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACCTTGCTCAGAAGTTTaGTTGCCGTCTCTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRPCSEV*LPSLLS
Trigger: GCTAAGAAGAGACGGCAACAAAACTTCTGAGCAAGG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGCATTCATCCATCCAATaGGTGGCTTGGGGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGHSSIQ*VAWGKG
Trigger: TCCCTTTCCCCAAGCCACCAATTGGATGGATGAATG...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GGATTCAGTGACCCCCTAACAGCCTCCCGGTGTCCTCTGCCCTCATGTTCCACAAGGTGGAGATGTAGATaGGGCAGGAACAATTTTCTA +
Preference number: 5 (lower is better)
Translates to: GFSDPLTASRCPLPSCSTRWRCR*GRNNFL
Trigger: TAGAAAATTGTTCCTGCCCAATCTACATCTCCACCT...TGTGGAACATGAGGGCAGAGGACACCGGGAGGCTGTTAGGGGGTCACTGAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AAACACTTCCCAAGTGCTCTCCACTCATCCTGGTCTGGAGCTTTGGCTCTACTCGGTGCTAGGCTCCACTaGAAAACACTTCCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: KHFPSALHSSWSGALALLGARLH*KTLPKC
Trigger: GCACTTGGGAAGTGTTTTCAAGTGGAGCCTAGCACC...GAGTAGAGCCAAAGCTCCAGACCAGGATGAGTGGAGAGCACTTGGGAAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACATGGTATCTGTAAGTaGACCTGCTACCCCAAAATC +
Preference number: 5 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRHGICK*TCYPKI
Trigger: GATTTTGGGGTAGCAGGTCAACTTACAGATACCATG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372801.5
ENST00000372806.8
CDS-3UTR CAA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCATCACTGTATTCCGCTaGGCCATGGTATCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: TSRWHADCQESPSHWRTFITVFR*AMVSVS
Trigger: ACTTACAGATACCATGGCCAAGCGGAATACAGTGAT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372801.5
ENST00000372806.8
CDS-3UTR CAA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCAATCACTGTATTCCGCTaGGCCATGGTATCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: YTHQDGTLTVKRALPTGAITVFR*AMVSVS
Trigger: ACTTACAGATACCATGGCCAAGCGGAATACAGTGAT...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372801.5
ENST00000372806.8
CDS-3UTR CAA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCTGCTCAATCATAGTATaGGCTCCATCAGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: TSRWHADCQESPSHWRTFCSIIV*APSVMV
Trigger: CACCATGACTGATGGAGCCAATACTATGATTGAGCA...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CATGGGGTCCAGGGCCAAGAGCCTCTTCTGAAGGTCCTCCACTGTCCAACTCTTCTCTTGCCAAAGCTGTaGATCTGGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: HGVQGQEPLLKVLHCPTLLLPKL*IWFSFS
Trigger: AGAAAAGGAAAACCAGATCAACAGCTTTGGCAAGAG...AAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCACTTGCTTTGTGATTTaGGCCATTCCCCTCTCTACA +
Preference number: 5 (lower is better)
Translates to: TSRWHADCQESPSHWRTFTCFVI*AIPLST
Trigger: TGTAGAGAGGGGAATGGCCAAAATCACAAAGCAAGT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCATCAGGTCATTGTTTCTaGAAGGCAGAGAACAAGCGA +
Preference number: 5 (lower is better)
Translates to: YTHQDGTLTVKRALPTGASGHCF*KAENKR
Trigger: TCGCTTGTTCTCTGCCTTCAAGAAACAATGACCTGA...TGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS GCA 90 bp CTACTCGGACAGTGCCCATCTCATCACCCACTGCTCGAACCATCGTaGCAGAATCCATTTCATCCTCTTCTGAGTTTTCTTCATCGTCCT +
Preference number: 5 (lower is better)
Translates to: LLGQCPSHHPLLEPS*QNPFHPLLSFLHRP
Trigger: AGGACGATGAAGAAAACTCAGAAGAGGATGAAATGGATTCTGGCACGATGGTTCGAGCAGTGGGTGATGAGATGGGCACTGTCCGAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCATTAAGTCTCGCAGTATaGACACTCCTTTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: KVLWRDDRAEVLANKHEALSLAV*TLLWHS
Trigger: GGAGTGCCAAAGGAGTGTCAATACTGCGAGACTTAA...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACTCTTGCCAAAGCTGTaGATCTGGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRLLPKL*IWFSFS
Trigger: AGAAAAGGAAAACCAGATCAACAGCTTTGGCAAGAG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAACCTCACAGCCTGGCCTaGCTCAGAAGTTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQPHSLA*LRSFVA
Trigger: GGCAACAAAACTTCTGAGCAAGGCCAGGCTGTGAGG...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATAACACAGTCCCGTGTTaGCTGAGAGTCCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYNTVPC*LRVPGR
Trigger: TCTACCAGGGACTCTCAGCAAACACGGGACTGTGTT...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGTCAGGTCATTGTTTCTaGAAGGCAGAGAACAAGCGA +
Preference number: 5 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGSGHCF*KAENKR
Trigger: TCGCTTGTTCTCTGCCTTCAAGAAACAATGACCTGA...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AGAGAGCCCTTCCCACTGGCGCACATTCCTGAGTTCACAAAGGTGCTGTGGAGACTCGTTAATAAGGGTTaGTGGTCCAAAGGACAGTTT +
Preference number: 5 (lower is better)
Translates to: REPFPLAHIPEFTKVLWRLVNKG*WSKGQF
Trigger: AAACTGTCCTTTGGACCACAAACCCTTATTAACGAG...TCTCCACAGCACCTTTGTGAACTCAGGAATGTGCGCCAGTGGGAAGGGCTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372806.8
CDS-3UTR CAA 90 bp AACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGCCCTCAATGTCACAAAGATaGTTCACAACACCATTATCC +
Preference number: 5 (lower is better)
Translates to: NMRQAIQNSPKAWVELGPSMSQR*FTTPLS
Trigger: GGATAATGGTGTTGTGAACAATCTTTGTGACATTGA...GGGCCCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372806.8
CDS-3UTR CAA 90 bp CCGTTTAAAACTGTACCTGTACAGAGATGCCACCACACTGCGTGGGGAATCTATTGCCTCCATGGGTGCTaGTCTGCTATATCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: PFKTVPVQRCHHTAWGIYCLHGC*SAISGR
Trigger: TCTACCAGATATAGCAGACAAGCACCCATGGAGGCA...ATAGATTCCCCACGCAGTGTGGTGGCATCTCTGTACAGGTACAGTTTTAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TGCCGCTTGGACTGGTACTTCTGCCGGATCTCTTCAATCTCCTGCTCCATCATGTCCAGACTGCTGTTCTaGGCTAGTTTTAAACTCGTA +
Preference number: 5 (lower is better)
Translates to: CRLDWYFCRISSISCSIMSRLLF*ASFKLV
Trigger: TACGAGTTTAAAACTAGCCAAGAACAGCAGTCTGGA...CATGATGGAGCAGGAGATTGAAGAGATCCGGCAGAAGTACCAGTCCAAGCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp ACATCAAGATGGCACGCTGACTGTCAAGAGAGCCCTTCCCACTGGCGCACATTCACTTCTTCTGGTTGTTaGGTTAAACTATCTTCATCC +
Preference number: 5 (lower is better)
Translates to: TSRWHADCQESPSHWRTFTSSGC*VKLSSS
Trigger: GGATGAAGATAGTTTAACCAAACAACCAGAAGAAGT...GAATGTGCGCCAGTGGGAAGGGCTCTCTTGACAGTCAGCGTGCCATCTTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATAACAGAAGCCCAAGGGGACCAGGTACACTCTaGCCAAAGCTGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: NFSGSSSSKCSSNNRSPRGPGTL*PKLLIW
Trigger: CCAGATCAACAGCTTTGGCAAGAGTGTACCTGGTCC...CCTTGGGCTTCTGTTATTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AAGGTGCTGTGGAGAGACGACAGAGCAGAAGTGCTGGCTAACAAACATGAGGCATTCTGTGTGTTCAGATaGAGCCTCCTGGAAAACAAA +
Preference number: 5 (lower is better)
Translates to: KVLWRDDRAEVLANKHEAFCVFR*SLLENK
Trigger: TTTGTTTTCCAGGAGGCTCAATCTGAACACACAGAA...TGCCTCATGTTTGTTAGCCAGCACTTCTGCTCTGTCGTCTCTCCACAGCACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAATTCCCTGCCTTTCCATaGATTCCCAGGTTTCAGGAG +
Preference number: 5 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQFPAFP*IPRFQE
Trigger: CTCCTGAAACCTGGGAATCAATGGAAAGGCAGGGAA...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTGGGTGGAGCTGGGGTTTCCCTGGCAATTTaGGATACATATGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NKHEASHPEFTQSLGGAGVSLAI*DTYVFS
Trigger: GGAAAAGACATATGTATCCAAAATTGCCAGGGAAAC...CCCAGCTCCACCCAGGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAATCCTGGTCTGGAGCTTaGGCTCTACTCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: NLDQNTLHTSLCILIARKSWSGA*ALLCHR
Trigger: TCTGTGGCAGAGTAGAGCCAAAGCTCCAGACCAGGA...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGACTTCTTCTGGTTGTTaGGTTAAACTATCTTCATCC +
Preference number: 5 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRTSSGC*VKLSSS
Trigger: GGATGAAGATAGTTTAACCAAACAACCAGAAGAAGT...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAAGTATTGACACTCCTTaGGCACTCCTGACAAATGGG +
Preference number: 5 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQSIDTP*ALLTNG
Trigger: CCCATTTGTCAGGAGTGCCAAAGGAGTGTCAATACT...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCTTCTGTGTGTTCAGATaGAGCCTCCTGGAAAACAAA +
Preference number: 5 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAFCVFR*SLLENK
Trigger: TTTGTTTTCCAGGAGGCTCAATCTGAACACACAGAA...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCGCTCTTAACGCTAACTaGCTTTGTGATTTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKAALNAN*LCDFGH
Trigger: ATGGCCAAAATCACAAAGCAAGTTAGCGTTAAGAGC...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCAGCAAGATCCTCAAATaGTCCTCTGTTTTCCGTATC +
Preference number: 5 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRASKILK*SSVFRI
Trigger: GATACGGAAAACAGAGGACAATTTGAGGATCTTGCT...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTGCCAAGATCGTGCCATaGTACTCCAGCCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFAKIVP*YSSLGD
Trigger: GTCGCCCAGGCTGGAGTACAATGGCACGATCTTGGC...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCATGGCTCACTGCATCCTaGACCTCCCTGGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: IQLSFQPKNASSSYLVYAWLTAS*TSLGSG
Trigger: ACCTGAGCCCAGGGAGGTCAAGGATGCAGTGAGCCA...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TTACAGTATCCTGAGGTGCAACCCAGTCATGGCTCCCCATCTGAGGGAAAGAGGTATCCAGGCTATATATaGAGGTTCTCGTTAATAAGG +
Preference number: 5 (lower is better)
Translates to: LQYPEVQPSHGSPSEGKRYPGYI*RFSLIR
Trigger: CCTTATTAACGAGAACCTCAATATATAGCCTGGATA...CCTCTTTCCCTCAGATGGGGAGCCATGACTGGGTTGCACCTCAGGATACTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372806.8
CDS-3UTR CAA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGTGTGACTTTAGGCAGTaGAGAGAGTGGAGATGGATG +
Preference number: 5 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWCDFRQ*REWRWM
Trigger: CATCCATCTCCACTCTCTCAACTGCCTAAAGTCACA...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCAAAACAGTCACATATTaGAACGTGGGTCACAAAAGC +
Preference number: 5 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRAKTVTY*NVGHKS
Trigger: GCTTTTGTGACCCACGTTCAAATATGTGACTGTTTT...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AACACAGTGAGACCTCGTCTCTTTAATGATGCCAGTCAACTGGCAGTCTTCAGAGATCTAAAACGCAATTaGTCCAGGTGCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: NTVRPRLFNDASQLAVFRDLKRN*SRCSGS
Trigger: TGAACCACTGCACCTGGACAAATTGCGTTTTAGATC...TCTGAAGACTGCCAGTTGACTGGCATCATTAAAGAGACGAGGTCTCACTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp CAGAAGTGCTGGCTAACAAACATGAGGCAAGCCATCCAGAATTCACCCAAAGCCACTTCTTCTGGTTGTTaGGTTAAACTATCTTCATCC +
Preference number: 5 (lower is better)
Translates to: QKCWLTNMRQAIQNSPKATSSGC*VKLSSS
Trigger: GGATGAAGATAGTTTAACCAAACAACCAGAAGAAGT...GGCTTTGGGTGAATTCTGGATGGCTTGCCTCATGTTTGTTAGCCAGCACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTGACCAATGTACATACACACATCAAGATGGCACGCTGACTGTCAAGAGAGCCTGCATCCTGGATGCTTaGGTTTTTAAAACTTACTTG +
Preference number: 5 (lower is better)
Translates to: PDQCTYTHQDGTLTVKRACILDA*VFKTYL
Trigger: CAAGTAAGTTTTAAAAACCAAAGCATCCAGGATGCA...GGCTCTCTTGACAGTCAGCGTGCCATCTTGATGTGTGTATGTACATTGGTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS CCA 90 bp AAGCATGTGGTTTCTCAGAAAGCGTATCTACACAGCAGGTTTCCCTaGCAATTTTGGATACATATGTCTTTTCCAGACTGCTGTTCTTGG +
Preference number: 5 (lower is better)
Translates to: KHVVSQKAYLHSRFP*QFWIHMSFPDCCSW
Trigger: CCAAGAACAGCAGTCTGGAAAAGACATATGTATCCAAAATTGCCAGGGAAACCTGCTGTGTAGATACGCTTTCTGAGAAACCACATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS-3UTR CAA 90 bp GGTCTGGAGCTTTGGCTCTACTCTGCCACAGATCCATATGATCCTCATAACACAACTTCTTCTGGTTGTTaGGTTAAACTATCTTCATCC +
Preference number: 5 (lower is better)
Translates to: GLELWLYSATDPYDPHNTTSSGC*VKLSSS
Trigger: GGATGAAGATAGTTTAACCAAACAACCAGAAGAAGT...TGTGTTATGAGGATCATATGGATCTGTGGCAGAGTAGAGCCAAAGCTCCAGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCCTCACAGCCTGGCCTaGCTCAGAAGTTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHPHSLA*LRSFVA
Trigger: GGCAACAAAACTTCTGAGCAAGGCCAGGCTGTGAGG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTAGAGCAAAGGCCAATTaGCAAAGAGGGTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFRAKAN*QRGCQA
Trigger: AGCCTGGCACCCTCTTTGCAAATTGGCCTTTGCTCT...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CTTCTGGCCAAAAGGCTTCATCAAGCTAGACTGGTAAGCAATAGACTTTGTTGGAGCAAGATCCTCAAATaGTCCTCTGTTTTCCGTATC +
Preference number: 5 (lower is better)
Translates to: LLAKRLHQARLVSNRLCWSKILK*SSVFRI
Trigger: GATACGGAAAACAGAGGACAATTTGAGGATCTTGCT...CCAACAAAGTCTATTGCTTACCAGTCTAGCTTGATGAAGCCTTTTGGCCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCCATCCAATTGGTGGCTaGGGGAAAGGGACAAAAAGG +
Preference number: 5 (lower is better)
Translates to: INVSWIEIYSLKESRLQFHPIGG*GKGTKR
Trigger: CCTTTTTGTCCCTTTCCCCAAGCCACCAATTGGATG...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AGTGGGGGCAATGGAGGAAGCTATGTCTCATACAAACTGCTGACCTCAATTGATGCTACAATTCTTAAGTaGCTTCAGATGACTGGTTCT +
Preference number: 5 (lower is better)
Translates to: SGGNGGSYVSYKLLTSIDATILK*LQMTGS
Trigger: AGAACCAGTCATCTGAAGCAACTTAAGAATTGTAGC...ATCAATTGAGGTCAGCAGTTTGTATGAGACATAGCTTCCTCCATTGCCCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ACAAGCGAGGACCTCAAATTTCTCTGGAAGCTCGAGTTCCAAATGCTCAAGCAAGCTACAATTCTTAAGTaGCTTCAGATGACTGGTTCT +
Preference number: 5 (lower is better)
Translates to: TSEDLKFLWKLEFQMLKQATILK*LQMTGS
Trigger: AGAACCAGTCATCTGAAGCAACTTAAGAATTGTAGC...TTGCTTGAGCATTTGGAACTCGAGCTTCCAGAGAAATTTGAGGTCCTCGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCACAGATCCATATGATCCTCATAACACAGAATGATTGCAGCCTCCAGAATCCAGTCTTCAGATTCATCTaGGACTTGTCTTTTCACAGC +
Preference number: 5 (lower is better)
Translates to: PQIHMILITQNDCSLQNPVFRFI*DLSFHS
Trigger: GCTGTGAAAAGACAAGTCCAAGATGAATCTGAAGAC...TGGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGGATCATATGGATCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCACTCACTCAGCAATCTaGACCAGAACACTCTTCATA +
Preference number: 5 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSTHSAI*TRTLFI
Trigger: TATGAAGAGTGTTCTGGTCAAGATTGCTGAGTGAGT...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCCCTTGCTCAGAAGTTTaGTTGCCGTCTCTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: INVSWIEIYSLKESRLQFPCSEV*LPSLLS
Trigger: GCTAAGAAGAGACGGCAACAAAACTTCTGAGCAAGG...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACAACACAGTCCCGTGTTaGCTGAGAGTCCCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHNTVPC*LRVPGR
Trigger: TCTACCAGGGACTCTCAGCAAACACGGGACTGTGTT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTTGCCTCCATGGGTGCTaGTCTGCTATATCTGGTAGA +
Preference number: 5 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFCLHGC*SAISGR
Trigger: TCTACCAGATATAGCAGACAAGCACCCATGGAGGCA...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCACTAGCTGCATGACCTaGGGAAGGAATCTTTCTCTC +
Preference number: 5 (lower is better)
Translates to: INVSWIEIYSLKESRLQFTSCMT*GRNLSL
Trigger: GAGAGAAAGATTCCTTCCCAAGGTCATGCAGCTAGT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp AATCTTGACCAGAACACTCTTCATACCTCCCTATGCATCCTGATAGCAAGGAAAAGATTCATCTTGGACTaGTCTTTTCACAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: NLDQNTLHTSLCILIARKRFILD*SFHSTA
Trigger: AGCTGTGCTGTGAAAAGACAAGTCCAAGATGAATCT...TTTCCTTGCTATCAGGATGCATAGGGAGGTATGAAGAGTGTTCTGGTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp CTCCCTGGTGATATCTTCATAGGGAAATTTCCACATTCCTTGCAGAAGACATCCCATTGTGTCACATGTTaGGAAAAGAAGTGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: LPGDIFIGKFPHSLQKTSHCVTC*EKKCSE
Trigger: TTCACTGCACTTCTTTTCCAAACATGTGACACAATG...GGATGTCTTCTGCAAGGAATGTGGAAATTTCCCTATGAAGATATCACCAGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp AACACAGTGAGACCTCGTCTCTTTAATGATGCCAGTCAACTGGCAGTCTTCAGATTTCTTTCCTATCCCTaGTCCATAGCTGTCTATATA +
Preference number: 5 (lower is better)
Translates to: NTVRPRLFNDASQLAVFRFLSYP*SIAVYI
Trigger: TATATAGACAGCTATGGACAAGGGATAGGAAAGAAA...TCTGAAGACTGCCAGTTGACTGGCATCATTAAAGAGACGAGGTCTCACTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS TCA 90 bp ACTCTTAAGAAACTCGTAGTCTCCATCCTGTGGTATTTTCCAATCTaGAGAATTTTTCAGTGGACCAGGTACACTCTTGCCAAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: TLKKLVVSILWYFPI*RIFQWTRYTLAKAV
Trigger: AACAGCTTTGGCAAGAGTGTACCTGGTCCACTGAAAAATTCTTCAGATTGGAAAATACCACAGGATGGAGACTACGAGTTTCTTAAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCACCTTGCTCAGAAGTTTaGTTGCCGTCTCTTCTTAGC +
Preference number: 5 (lower is better)
Translates to: IQLSFQPKNASSSYLVYAPCSEV*LPSLLS
Trigger: GCTAAGAAGAGACGGCAACAAAACTTCTGAGCAAGG...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTTGTGACTTTAGGCAGTaGAGAGAGTGGAGATGGATG +
Preference number: 5 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFCDFRQ*REWRWM
Trigger: CATCCATCTCCACTCTCTCAACTGCCTAAAGTCACA...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAAAAACGCTTTTCCTTaGTGGACTGAACACAGTCCC +
Preference number: 5 (lower is better)
Translates to: INVSWIEIYSLKESRLQFKNAFP*WTEHSP
Trigger: GGGACTGTGTTCAGTCCACAAAGGAAAAGCGTTTTT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACCATTCATCCATCCAATaGGTGGCTTGGGGAAAGGGA +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHHSSIQ*VAWGKG
Trigger: TCCCTTTCCCCAAGCCACCAATTGGATGGATGAATG...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCACAGATCCATATGATCCTCATAACACAGAATGATTGCAGCCTCCAGAATCCAAAATTTCCACATTCCTaGCAGAAGACATCCATAGAT +
Preference number: 5 (lower is better)
Translates to: PQIHMILITQNDCSLQNPKFPHS*QKTSID
Trigger: ATCTATGGATGTCTTCTGCAAGGAATGTGGAAATTT...TGGATTCTGGAGGCTGCAATCATTCTGTGTTATGAGGATCATATGGATCTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACAGTATTGACACTCCTTaGGCACTCCTGACAAATGGG +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHSIDTP*ALLTNG
Trigger: CCCATTTGTCAGGAGTGCCAAAGGAGTGTCAATACT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACTTAAGTCTCGCAGTATaGACACTCCTTTGGCACTCC +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHLSLAV*TLLWHS
Trigger: GGAGTGCCAAAGGAGTGTCAATACTGCGAGACTTAA...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCAGGTGGAGATGTAGATaGGGCAGGAACAATTTTCTA +
Preference number: 5 (lower is better)
Translates to: INVSWIEIYSLKESRLQFRWRCR*GRNNFL
Trigger: TAGAAAATTGTTCCTGCCCAATCTACATCTCCACCT...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp ATTCAGCTGTCTTTCCAACCTAAAAATGCCAGTTCGAGTTATTTAGTCTATGCAATCACTGTATTCCGCTaGGCCATGGTATCCGTTTTA +
Preference number: 5 (lower is better)
Translates to: IQLSFQPKNASSSYLVYAITVFR*AMVSVL
Trigger: TAAAACGGATACCATGGCCAAGCGGAATACAGTGAT...TGCATAGACTAAATAACTCGAACTGGCATTTTTAGGTTGGAAAGACAGCTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000499879.6
CDS-3UTR CAA 90 bp TGCCATGTTGCTCAGGCTGGTATCTATTTCTTCTTGAATGAATTTTGGTACTTTCTCTTGCCAAAGCTGTaGATCTGGTTTTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CHVAQAGIYFFLNEFWYFLLPKL*IWFSFS
Trigger: AGAAAAGGAAAACCAGATCAACAGCTTTGGCAAGAG...AAAGTACCAAAATTCATTCAAGAAGAAATAGATACCAGCCTGAGCAACATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACACTTGCTTTGTGATTTaGGCCATTCCCCTCTCTACA +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHTCFVI*AIPLST
Trigger: TGTAGAGAGGGGAATGGCCAAAATCACAAAGCAAGT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS TCA 90 bp TTTCACAGCACAGCTGGTGTGTCATTTTTACTTCCCTTCTCTGCTTaGTTTCTTGCTGGATTCCAAAGAGTATTTTTCCAACTTACAAAA +
Preference number: 5 (lower is better)
Translates to: FHSTAGVSFLLPFSA*FLAGFQRVFFQLTK
Trigger: TTTTGTAAGTTGGAAAAATACTCTTTGGAATCCAGCAAGAAATCAAGCAGAGAAGGGAAGTAAAAATGACACACCAGCTGTGCTGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480745.5
CDS-3UTR CAA 90 bp ATAAATGTTTCCTGGATCGAAATCTACAGTCTCAAGGAGTCAAGGCTACAATTCTGCATCCTGGATGCTTaGGTTTTTAAAACTTACTTG +
Preference number: 5 (lower is better)
Translates to: INVSWIEIYSLKESRLQFCILDA*VFKTYL
Trigger: CAAGTAAGTTTTAAAAACCAAAGCATCCAGGATGCA...GAATTGTAGCCTTGACTCCTTGAGACTGTAGATTTCGATCCAGGAAACATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS-3UTR CAA 90 bp GAAATTTCCACATTCCTTGCAGAAGACATCCATAGATCTAAAACGCAATTTGTCTCTCTGCTTGATTTCTaGCTGGATTCCAAAGAGTAT +
Preference number: 5 (lower is better)
Translates to: EISTFLAEDIHRSKTQFVSLLDF*LDSKEY
Trigger: ATACTCTTTGGAATCCAGCAAGAAATCAAGCAGAGA...GACAAATTGCGTTTTAGATCTATGGATGTCTTCTGCAAGGAATGTGGAAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487587.2
CDS CCA 90 bp GTGTTAAAAAGACCAGGAATCACTAAATCTGTCTATAATAGGGATTaGAGTAAAGCGAAGAAGGACATCACAAGCTGTAAATTTACCTTC +
Preference number: 5 (lower is better)
Translates to: VLKRPGITKSVYNRD*SKAKKDITSCKFTF
Trigger: GAAGGTAAATTTACAGCTTGTGATGTCCTTCTTCGCTTTACTCCAATCCCTATTATAGACAGATTTAGTGATTCCTGGTCTTTTTAACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488618.1
CDS-3UTR CAA 90 bp CCTCAATTGATTACTTACATCCAAACCTTACAAAATAGCATTTCAAGTCAGCACAAAACAGTCACATATTaGAACGTGGGTCACAAAAGC +
Preference number: 5 (lower is better)
Translates to: PQLITYIQTLQNSISSQHKTVTY*NVGHKS
Trigger: GCTTTTGTGACCCACGTTCAAATATGTGACTGTTTT...GTGCTGACTTGAAATGCTATTTTGTAAGGTTTGGATGTAAGTAATCAATTGAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS GCA 72 bp TGGCTCCATCAGTCATGGTGCTGGCTACTCGGACAGTaGCCATCTCATCACCCACTGCTCGAACCATCGTGC +
Preference number: 6 (lower is better)
Translates to: WLHQSWCWLLGQ*PSHHPLLEPSC
Trigger: GCACGATGGTTCGAGCAGTGGGTGATGAGATGGGCACTGTCCGAGTAGCCAGCACCATGACTGATGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS GCA 72 bp GCTGGCTACTCGGACAGTGCCCATCTCATCACCCACTaGTCGAACCATCGTGCCAGAATCCATTTCATCCTC +
Preference number: 6 (lower is better)
Translates to: AGYSDSAHLITH*SNHRARIHFIL
Trigger: GAGGATGAAATGGATTCTGGCACGATGGTTCGAGCAGTGGGTGATGAGATGGGCACTGTCCGAGTAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS TCA 72 bp TGCTCCATCATGGGGTCCAGGGCCAAGAGCCTCTTCTaGAGGTCCTCCACTGTCCAACTCTTAAGAAACTCG +
Preference number: 6 (lower is better)
Translates to: CSIMGSRAKSLF*RSSTVQLLRNS
Trigger: CGAGTTTCTTAAGAGTTGGACAGTGGAGGACCTTCAGAAGAGGCTCTTGGCCCTGGACCCCATGATGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372806.8
ENST00000499879.6
CDS CAA 90 bp GTGCCCAGTTGTGATGGCAACGTGTCATCGTGCTCAATCATAGTATaGGCTCCATCAGTCATGGTGCTGGCTACTCGGACAGTGCCCATC +
Preference number: 6 (lower is better)
Translates to: VPSCDGNVSSCSIIV*APSVMVLATRTVPI
Trigger: GATGGGCACTGTCCGAGTAGCCAGCACCATGACTGATGGAGCCAATACTATGATTGAGCACGATGACACGTTGCCATCACAACTGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS TCA 72 bp TTAAGTCTCGCAGTATTGACACTCCTTTGGCACTCCTaGCAAATGGGTGCTGCAGGAGCTGAGTGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: LSLAVLTLLWHS*QMGAAGAEWLW
Trigger: CCACAGCCACTCAGCTCCTGCAGCACCCATTTGTCAGGAGTGCCAAAGGAGTGTCAATACTGCGAGACTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS GCA 72 bp ACCATGGTGCCCAGTTGTGATGGCAACGTGTCATCGTaGTCAATCATAGTATTGGCTCCATCAGTCATGGTG +
Preference number: 6 (lower is better)
Translates to: TMVPSCDGNVSS*SIIVLAPSVMV
Trigger: CACCATGACTGATGGAGCCAATACTATGATTGAGCACGATGACACGTTGCCATCACAACTGGGCACCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS CCA 72 bp TCATCGTCCTGGTCCACTTCCCGCTGCTGGGATTCCTaGCGTTTCAGTTTCACATCCATGGCTTCATTAATT +
Preference number: 6 (lower is better)
Translates to: SSSWSTSRCWDS*RFSFTSMASLI
Trigger: AATTAATGAAGCCATGGATGTGAAACTGAAACGCCAGGAATCCCAGCAGCGGGAAGTGGACCAGGACGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS CAA 72 bp TGTGATGGCAACGTGTCATCGTGCTCAATCATAGTATaGGCTCCATCAGTCATGGTGCTGGCTACTCGGACA +
Preference number: 6 (lower is better)
Translates to: CDGNVSSCSIIV*APSVMVLATRT
Trigger: TGTCCGAGTAGCCAGCACCATGACTGATGGAGCCAATACTATGATTGAGCACGATGACACGTTGCCATCACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS GCA 72 bp CAGTGCCCATCTCATCACCCACTGCTCGAACCATCGTaGCAGAATCCATTTCATCCTCTTCTGAGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: QCPSHHPLLEPS*QNPFHPLLSFL
Trigger: AAGAAAACTCAGAAGAGGATGAAATGGATTCTGGCACGATGGTTCGAGCAGTGGGTGATGAGATGGGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS TCA 72 bp TGCTTCTTCTGGGGCAGGAAAAAGACTGGGACCCAATaGCCTACCTATAGTTTCTTTACACTCACCCTTCTC +
Preference number: 6 (lower is better)
Translates to: CFFWGRKKTGTQ*PTYSFFTLTLL
Trigger: GAGAAGGGTGAGTGTAAAGAAACTATAGGTAGGTCATTGGGTCCCAGTCTTTTTCCTGCCCCAGAAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488618.1
CDS CCA 72 bp GTTTCTCAGAAAGCGTATCTACACAGCAGGTTTCCCTaGCAATTTTGGATACATATGTCTTTTCCAGACTGC +
Preference number: 6 (lower is better)
Translates to: VSQKAYLHSRFP*QFWIHMSFPDC
Trigger: GCAGTCTGGAAAAGACATATGTATCCAAAATTGCCAGGGAAACCTGCTGTGTAGATACGCTTTCTGAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS CAA 90 bp GGTTTCTCAGAAAGCGTATCTACACAGCAGGTTTCCCTGGCAATTTaGGATACATATGTCTTTTCCAGACTGCTGTTCTTGGCTAGTTTT +
Preference number: 6 (lower is better)
Translates to: GFSESVSTQQVSLAI*DTYVFSRLLFLASF
Trigger: AAAACTAGCCAAGAACAGCAGTCTGGAAAAGACATATGTATCCAAAATTGCCAGGGAAACCTGCTGTGTAGATACGCTTTCTGAGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372801.5
CDS GCA 72 bp TGTTCAAAATATTCAAGAAAGGATGGTTTCGCAGGCTaGATGGTCTCATCCCTTCTTTTCATAGTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: CSKYSRKDGFAG*MVSSLLFIVPS
Trigger: GGAAGGAACTATGAAAAGAAGGGATGAGACCATGCAGCCTGCGAAACCATCCTTTCTTGAATATTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372801.5
ENST00000372806.8
ENST00000499879.6
CDS CCA 72 bp CAGATTCATCTTGGACTTGTCTTTTCACAGCACAGCTaGTGTGTCATTTTTACTTCCCTTCTCTGCTTGATT +
Preference number: 6 (lower is better)
Translates to: QIHLGLVFSQHS*CVIFTSLLCLI
Trigger: AATCAAGCAGAGAAGGGAAGTAAAAATGACACACCAGCTGTGCTGTGAAAAGACAAGTCCAAGATGAATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480745.5
ENST00000487587.2