Pregenerated sensors for STK39 (Homo sapiens)
Ensembl gene IDs: ENSG00000198648Ensembl transcript IDs: ENST00000355999.5, ENST00000461000.1, ENST00000487143.5
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAGACTATTCCAGAGTAAAGCAGCCTCAGGCACATTCTTAATGTaGAAGTTTGCAAGGCACCTCCCTCTCCCAAGAGACAGTCAGATT | + |
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Preference number: 1 (lower is better) Translates to: LRLFQSKAASGTFLM*KFARHLPLPRDSQI Trigger: AATCTGACTGTCTCTTGGGAGAGGGAGGTGCCTTGCAAACTTTCACATTAAGAATGTGCCTGAGGCTGCTTTACTCTGGAATAGTCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| 3UTR TCA 72 bp | AAGCAGAGGGCTACTTGGGTTGAAAGTATTGATTCTTaGACCTTAACAGCGTTTTACCTTTTAGTCATTGCA | + |
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Preference number: 3 (lower is better) Translates to: KQRATWVESIDS*TLTAFYLLVIA Trigger: TGCAATGACTAAAAGGTAAAACGCTGTTAAGGTTCAAGAATCAATACTTTCAACCCAAGTAGCCCTCTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS TCA 90 bp | GCTGGGGAAGCTGGACGTGCACGGGCGAGCCGCTCGGCTCCGCCATaGTGCTGCGGAGGAGAGCAGGAGGACGCGCCGGCCGACGGACGA | + |
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Preference number: 5 (lower is better) Translates to: AGEAGRARASRSAPP*CCGGEQEDAPADGR Trigger: TCGTCCGTCGGCCGGCGCGTCCTCCTGCTCTCCTCCGCAGCATCATGGCGGAGCCGAGCGGCTCGCCCGTGCACGTCCAGCTTCCCCAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS TCA 90 bp | GTTGAAAGGACAAATAGGGTATCTTCCAGTTCTAGAGATCCTTTATaGTTGCAGTTCCAGTCTATTTCATCTTTGCCCGGCTTCCATGAT | + |
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Preference number: 5 (lower is better) Translates to: VERTNRVSSSSRDPL*LQFQSISSLPGFHD Trigger: ATCATGGAAGCCGGGCAAAGATGAAATAGACTGGAACTGCAATCATAAAGGATCTCTAGAACTGGAAGATACCCTATTTGTCCTTTCAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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| CDS GCA 90 bp | AAAGGACAAATAGGGTATCTTCCAGTTCTAGAGATCCTTTATGATTaGAGTTCCAGTCTATTTCATCTTTGCCCGGCTTCCATGATTAGA | + |
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Preference number: 5 (lower is better) Translates to: KGQIGYLPVLEILYD*SSSLFHLCPASMIR Trigger: TCTAATCATGGAAGCCGGGCAAAGATGAAATAGACTGGAACTGCAATCATAAAGGATCTCTAGAACTGGAAGATACCCTATTTGTCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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| CDS CCA 90 bp | AATACAAACTGCAAGCAAAATGATCTAGGCTTCAAGATTCTTATATaGCCGCTCTTAGTCAAAGGTGTGACGATAAGAAAAAGCTATGCT | + |
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Preference number: 5 (lower is better) Translates to: NTNCKQNDLGFKILI*PLLVKGVTIRKSYA Trigger: AGCATAGCTTTTTCTTATCGTCACACCTTTGACTAAGAGCGGCCATATAAGAATCTTGAAGCCTAGATCATTTTGCTTGCAGTTTGTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461000.1 |
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| CDS TCA 72 bp | GCTGGACGTGCACGGGCGAGCCGCTCGGCTCCGCCATaGTGCTGCGGAGGAGAGCAGGAGGACGCGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: AGRARASRSAPP*CCGGEQEDAPA Trigger: GGCCGGCGCGTCCTCCTGCTCTCCTCCGCAGCATCATGGCGGAGCCGAGCGGCTCGCCCGTGCACGTCCAGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS TCA 72 bp | CAGGAGGACGCGCCGGCCGACGGACGACCTTCCACTTaGAACTTCCTTTGCCTCGCCGCCGACACCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: QEDAPADGRPST*NFLCLAADTSR Trigger: CCGAGAGGTGTCGGCGGCGAGGCAAAGGAAGTTTCAAGTGGAAGGTCGTCCGTCGGCCGGCGCGTCCTCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS CAA 72 bp | GCAGGAGGACGCGCCGGCCGACGGACGACCTTCCACTaGAAACTTCCTTTGCCTCGCCGCCGACACCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: AGGRAGRRTTFH*KLPLPRRRHLS Trigger: CGAGAGGTGTCGGCGGCGAGGCAAAGGAAGTTTCAAGTGGAAGGTCGTCCGTCGGCCGGCGCGTCCTCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS TCA 72 bp | GCTACACGTTCTTGCCTGGGTTTGCATAGGGCTGCCTaGACCACAGCAGTAGCTCCACTGCCGATAACCTCC | + |
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Preference number: 6 (lower is better) Translates to: ATRSCLGLHRAA*TTAVAPLPITS Trigger: GGAGGTTATCGGCAGTGGAGCTACTGCTGTGGTTCAGGCAGCCCTATGCAAACCCAGGCAAGAACGTGTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS CAA 72 bp | TGGGCCCTGAGAGTCGTGCACAGAGAGGGACTGTATTaGTTCGGGGATGGTGCTGGCACTCACTGCAATCTC | + |
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Preference number: 6 (lower is better) Translates to: WALRVVHREGLY*FGDGAGTHCNL Trigger: GAGATTGCAGTGAGTGCCAGCACCATCCCCGAACAAATACAGTCCCTCTCTGTGCACGACTCTCAGGGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000355999.5 ENST00000487143.5 |
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| CDS CAA 90 bp | AGCATTGGGTGGGCCCTGAGAGTCGTGCACAGAGAGGGACTGTATTaGTTCGGGGATGGTGCTGGCACTCACTGCAATCTCTGGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: SIGWALRVVHREGLY*FGDGAGTHCNLWIF Trigger: GAAAATCCAGAGATTGCAGTGAGTGCCAGCACCATCCCCGAACAAATACAGTCCCTCTCTGTGCACGACTCTCAGGGCCCACCCAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355999.5 ENST00000487143.5 |
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| CDS TCA 72 bp | CCAGTCCCCGTCTTCGGTTTTATGAAGGTGACCACTTaGCCCAGGAACTCTTCTTACCGTCCACCAGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PVPVFGFMKVTT*PRNSSYRPPVC Trigger: GCACACTGGTGGACGGTAAGAAGAGTTCCTGGGTCAAGTGGTCACCTTCATAAAACCGAAGACGGGGACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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| CDS CAA 72 bp | CCCAGTCCCCGTCTTCGGTTTTATGAAGGTGACCACTaGACCCAGGAACTCTTCTTACCGTCCACCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: PSPRLRFYEGDH*TQELFLPSTSV Trigger: CACACTGGTGGACGGTAAGAAGAGTTCCTGGGTCAAGTGGTCACCTTCATAAAACCGAAGACGGGGACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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| CDS CCA 72 bp | AGTCGTGCACAGAGAGGGACTGTATTTGTTCGGGGATaGTGCTGGCACTCACTGCAATCTCTGGATTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SRAQRGTVFVRG*CWHSLQSLDFL Trigger: AAGAAAATCCAGAGATTGCAGTGAGTGCCAGCACCATCCCCGAACAAATACAGTCCCTCTCTGTGCACGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000355999.5 ENST00000487143.5 |
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| CDS TCA 72 bp | TGCCCGGCTTCCATGATTAGAAACTCTCCTATAAAATaGGCCCTAAACTGTTTCCCAGCCCTCTTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: CPASMIRNSPIK*ALNCFPALFSI Trigger: AATGGAGAAGAGGGCTGGGAAACAGTTTAGGGCTCATTTTATAGGAGAGTTTCTAATCATGGAAGCCGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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| CDS CCA 72 bp | AACTCTTCTTACCTTTTTGGCTCTTTGGGCTATGTCTaGTGTTCTTGTAAGCAGCTTCTCAATCAGGTACTC | + |
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Preference number: 6 (lower is better) Translates to: NSSYLFGSLGYV*CSCKQLLNQVL Trigger: GAGTACCTGATTGAGAAGCTGCTTACAAGAACACCAGACATAGCCCAAAGAGCCAAAAAGGTAAGAAGAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS TCA 72 bp | ACAAATAGGGTATCTTCCAGTTCTAGAGATCCTTTATaGTTGCAGTTCCAGTCTATTTCATCTTTGCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: TNRVSSSSRDPL*LQFQSISSLPG Trigger: GCCGGGCAAAGATGAAATAGACTGGAACTGCAATCATAAAGGATCTCTAGAACTGGAAGATACCCTATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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| CDS CAA 72 bp | GCCTCTTCCAGAACTCCATTCTTGTGTTCTCCTCGGTaGACAATGTATTTTATGATATCCAACATTGAACCT | + |
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Preference number: 6 (lower is better) Translates to: ASSRTPFLCSPR*TMYFMISNIEP Trigger: AGGTTCAATGTTGGATATCATAAAATACATTGTCAACCGAGGAGAACACAAGAATGGAGTTCTGGAAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS CAA 90 bp | GCTATTATTGCCTCTTCCAGAACTCCATTCTTGTGTTCTCCTCGGTaGACAATGTATTTTATGATATCCAACATTGAACCTCCACTTAGT | + |
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Preference number: 6 (lower is better) Translates to: AIIASSRTPFLCSPR*TMYFMISNIEPPLS Trigger: ACTAAGTGGAGGTTCAATGTTGGATATCATAAAATACATTGTCAACCGAGGAGAACACAAGAATGGAGTTCTGGAAGAGGCAATAATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355999.5 |
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| CDS CCA 72 bp | TGCAAGCAAAATGATCTAGGCTTCAAGATTCTTATATaGCCGCTCTTAGTCAAAGGTGTGACGATAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: CKQNDLGFKILI*PLLVKGVTIRK Trigger: TTTTCTTATCGTCACACCTTTGACTAAGAGCGGCCATATAAGAATCTTGAAGCCTAGATCATTTTGCTTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461000.1 |
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| CDS GCA 72 bp | ATCCTTTATGATTGCAGTTCCAGTCTATTTCATCTTTaGCCGGCTTCCATGATTAGAAACTCTCCTATAAAA | + |
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Preference number: 6 (lower is better) Translates to: ILYDCSSSLFHL*PASMIRNSPIK Trigger: TTTTATAGGAGAGTTTCTAATCATGGAAGCCGGGCAAAGATGAAATAGACTGGAACTGCAATCATAAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487143.5 |
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