RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK38L (Homo sapiens)

Ensembl gene IDs: ENSG00000211455

Ensembl transcript IDs: ENST00000389032.8, ENST00000407753.2, ENST00000434385.2, ENST00000536093.5, ENST00000539863.1, ENST00000540996.5, ENST00000541191.5, ENST00000543246.5, ENST00000543992.1, ENST00000544367.5, ENST00000544969.5, ENST00000545470.5, ENST00000546286.5

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTaGTTATGGGTGAATGTTATCTTCATTCATAACTTCCCAGCTTTC +
Preference number: 1 (lower is better)
Translates to: YLRQASLVMQLPEFS*LWVNVIFIHNFPAF
Trigger: GAAAGCTGGGAAGTTATGAATGAAGATAACATTCACCCATAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR GCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTAGGCCTTTCCCTTATGTaGTCCCAGTCGACACCTTCA +
Preference number: 2 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLGLSLM*SQSTPS
Trigger: TGAAGGTGTCGACTGGGAGCACATAAGGGAAAGGCC...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR TCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGCCAAGCAAGCCTGGTaGTGCAGCTACCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: EKPSLWICSPVLWYLALVAKQAW*CSYLSS
Trigger: AGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGC...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR TCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAGCCAAGCAAGCCTGGTaGTGCAGCTACCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPAKQAW*CSYLSS
Trigger: AGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGC...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR CCA 90 bp GCTTCTACCAAAATATCTCTTTCTGCTCGGATATGGGCCACCTGCTCTTTTTCACCTGTATCTTTCTTCTaGACCAACCGCACCTCTCCA +
Preference number: 2 (lower is better)
Translates to: ASTKISLSARIWATCSFSPVSFF*TNRTSP
Trigger: TGGAGAGGTGCGGTTGGTCCAGAAGAAAGATACAGG...TGAAAAAGAGCAGGTGGCCCATATCCGAGCAGAAAGAGATATTTTGGTAGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544367.5
3UTR-3UTR CCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTACTGGTGTCCCAACTGTaGAATATGCCAGTTGTCTCC +
Preference number: 2 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLLVSQL*NMPVVS
Trigger: GGAGACAACTGGCATATTCCACAGTTGGGACACCAG...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR CCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTGAAAAACCCAGTCTTTaGATTTGTAGTCCGGTTCTG +
Preference number: 2 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSEKPSL*ICSPVL
Trigger: CAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR TCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAGGTGATGCAGCTACCTaGGTTCTCTTGGTTATGGGT +
Preference number: 2 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPGDAAT*VLLVMG
Trigger: ACCCATAACCAAGAGAACTCAGGTAGCTGCATCACC...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR GCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTAGAGCCAGCTGGCACTaGCAACCAATTCCTATAGTA +
Preference number: 2 (lower is better)
Translates to: SIKDLSGLNTACPQERKIRASWH*QPIPIV
Trigger: TACTATAGGAATTGGTTGGCAGTGCCAGCTGGCTCT...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR TCA 90 bp TCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCATGTAACCAGTCTGCATaGATACTTCTGGAGCAATGT +
Preference number: 2 (lower is better)
Translates to: SGSVVFGTGCKISDSGKSCNQSA*ILLEQC
Trigger: ACATTGCTCCAGAAGTATTCATGCAGACTGGTTACA...TGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR GCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTGTAAAACATCAATACTaGAGTGTTACCTACAGGTTA +
Preference number: 2 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSVKHQY*SVTYRL
Trigger: TAACCTGTAGGTAACACTGCAGTATTGATGTTTTAC...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR CCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTCTACCTGAGTTCTCTTaGTTATGGGTGAATGTTATC +
Preference number: 2 (lower is better)
Translates to: EKPSLWICSPVLWYLALVLPEFS*LWVNVI
Trigger: GATAACATTCACCCATAACCAAGAGAACTCAGGTAG...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR CCA 90 bp ATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGTATAGGGATTGCTGCTaGCCTTTCCCTTATGTGCTC +
Preference number: 2 (lower is better)
Translates to: ICSPVLWYLALVVKYQIQYRDCC*PFPYVL
Trigger: GAGCACATAAGGGAAAGGCCAGCAGCAATCCCTATA...CTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGACTACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR CAA 90 bp CTGTGGAGCTACCCAGCAGCAACATTTATAAAAGCTTGTGTAGATTaGCATAATGCTCCTATGCAATTCTTCCCCATTAGGAAGACATTC +
Preference number: 2 (lower is better)
Translates to: LWSYPAATFIKACVD*HNAPMQFFPIRKTF
Trigger: GAATGTCTTCCTAATGGGGAAGAATTGCATAGGAGCATTATGCAAATCTACACAAGCTTTTATAAATGTTGCTGCTGGGTAGCTCCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR TCA 90 bp CTCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATGTGTTTCTCCTGAATTaGTTAGAGGTGTTACAGTTC +
Preference number: 2 (lower is better)
Translates to: LYQRSVRSEYSMPTGKENVFLLN*LEVLQF
Trigger: GAACTGTAACACCTCTAATCAATTCAGGAGAAACAC...ATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR GCA 90 bp CTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCATCAAAATAGAGCCAGCTGGCACTaGCAACCAATTCCTATAGTA +
Preference number: 2 (lower is better)
Translates to: LWYLALVVKYQIQGSHQNRASWH*QPIPIV
Trigger: TACTATAGGAATTGGTTGGCAGTGCCAGCTGGCTCT...ATTTTGATGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR GCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAGATTTCTATAGGGATTaGTGCTGGCCTTTCCCTTAT +
Preference number: 2 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPDFYRD*CWPFPY
Trigger: ATAAGGGAAAGGCCAGCAGCAATCCCTATAGAAATC...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR CCA 90 bp CTCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATCTACCTGAGTTCTCTTaGTTATGGGTGAATGTTATC +
Preference number: 2 (lower is better)
Translates to: LYQRSVRSEYSMPTGKENLPEFS*LWVNVI
Trigger: GATAACATTCACCCATAACCAAGAGAACTCAGGTAG...ATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR TCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTCAGTACATCTCCCTATaGGTATACAGACTACGTATA +
Preference number: 2 (lower is better)
Translates to: SIKDLSGLNTACPQERKIQYISL*VYRLRI
Trigger: TATACGTAGTCTGTATACTCATAGGGAGATGTACTG...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR GCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTTTCTATAGGGATTGCTaGTGGCCTTTCCCTTATGTG +
Preference number: 2 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLFYRDC*WPFPYV
Trigger: CACATAAGGGAAAGGCCAGCAGCAATCCCTATAGAA...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR TCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTTACAGACTACGTATATaGAGGTCATCAGTATTTCTG +
Preference number: 2 (lower is better)
Translates to: SIKDLSGLNTACPQERKIYRLRI*RSSVFL
Trigger: CAGAAATACTGATGACCTTCATATACGTAGTCTGTA...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR TCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTTTTCTGTACGTTTCTTaGGGTGTTTCAGAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLFLYVS*GVSEQK
Trigger: TTTCTGCTCTGAAACACCTCAAGAAACGTACAGAAA...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR CCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACTACAAGCAGCCTTCATaGTCATGTCTTAAATTCAAC +
Preference number: 2 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNYKQPS*SCLKFN
Trigger: GTTGAATTTAAGACATGACCATGAAGGCTGCTTGTA...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR-3UTR CCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTCTGCATGAATACTTCTaGAGCAATGTAATCTGGTGT +
Preference number: 2 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLLHEYF*SNVIWC
Trigger: ACACCAGATTACATTGCTCCAGAAGTATTCATGCAG...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR CCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAGAGTTCTCTTGGTTATaGGTGAATGTTATCTTCATT +
Preference number: 2 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPEFSWL*VNVIFI
Trigger: AATGAAGATAACATTCACCCATAACCAAGAGAACTC...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR TCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTGAAGATGGCTTTTACTaGTTATCTAGACCCATAAGA +
Preference number: 2 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLEDGFY*LSRPIR
Trigger: TCTTATGGGTCTAGATAATCAGTAAAAGCCATCTTC...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR CAA 90 bp TTTGCAGTAAAACATCAATACTGCAGTGTTACCTACAGGTTAGCCTATGTTGCTGGGGATAGAGCCACGTaGAGTCAACCCTTCAAACCT +
Preference number: 3 (lower is better)
Translates to: FAVKHQYCSVTYRLAYVAGDRAT*SQPFKP
Trigger: AGGTTTGAAGGGTTGACTCAACGTGGCTCTATCCCC...AGCAACATAGGCTAACCTGTAGGTAACACTGCAGTATTGATGTTTTACTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR TCA 72 bp TTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTaGGTTCTCTTGGTTATGGGTGAATGTTATCTTCAT +
Preference number: 3 (lower is better)
Translates to: LSTPSKPGDAAT*VLLVMGECYLH
Trigger: ATGAAGATAACATTCACCCATAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR CAA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTATGTGTTTCTCCTGAATaGATTAGAGGTGTTACAGTT +
Preference number: 3 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLCVSPE*IRGVTV
Trigger: AACTGTAACACCTCTAATCAATTCAGGAGAAACACA...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR CAA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTATGTGGAATATGCCAGTaGTCTCCTGTTCTTCTTCCA +
Preference number: 3 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLCGICQ*SPVLLP
Trigger: TGGAAGAAGAACAGGAGACAACTGGCATATTCCACA...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR-3UTR CAA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCACTGAGAATTAAGTCCTaGGCTTTCTCAGATATAGGT +
Preference number: 3 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPLRIKS*AFSDIG
Trigger: ACCTATATCTGAGAAAGCCAAGGACTTAATTCTCAG...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR GCA 72 bp TCTCAACAAAGTAGCTTTCCAGAACTACCCTTCCAGTaGCAAGAAAGTAAAACTATTTGCAAGCTCTTTCTG +
Preference number: 3 (lower is better)
Translates to: SQQSSFPELPFQ*QESKTICKLFL
Trigger: CAGAAAGAGCTTGCAAATAGTTTTACTTTCTTGGCACTGGAAGGGTAGTTCTGGAAAGCTACTTTGTTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR CCA 72 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTaGTATTTGGCACTGGTTGTAAAATATCAGATTCAG +
Preference number: 3 (lower is better)
Translates to: EKPSLWICSPVL*YLALVVKYQIQ
Trigger: CTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR GCA 72 bp TCTAGACCCATAAGATTTGCAGTAAAACATCAATACTaGAGTGTTACCTACAGGTTAGCCTATGTTGCTTTA +
Preference number: 3 (lower is better)
Translates to: SRPIRFAVKHQY*SVTYRLAYVAL
Trigger: TAAAGCAACATAGGCTAACCTGTAGGTAACACTGCAGTATTGATGTTTTACTGCAAATCTTATGGGTCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR-3UTR CAA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTATATTAGTGGAGTGCTaGAGTGAAGGTGTTAAACTT +
Preference number: 3 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISILVEC*SEGVKL
Trigger: AAGTTTAACACCTTCACTCAAGCACTCCACTAATAT...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
3UTR TCA 72 bp TATACAGACTACGTATATGAAGGTCATCAGTATTTCTaGATGCAACGTAAATATATTAGTGGAGTGCTTGAG +
Preference number: 3 (lower is better)
Translates to: YTDYVYEGHQYF*MQRKYISGVLE
Trigger: CTCAAGCACTCCACTAATATATTTACGTTGCATTCAGAAATACTGATGACCTTCATATACGTAGTCTGTATA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTAGCCAAGCAAGCCTGGTaGTGCAGCTACCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLAKQAW*CSYLSS
Trigger: AGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGC...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTAGGTGATGCAGCTACCTaGGTTCTCTTGGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLGDAAT*VLLVMG
Trigger: ACCCATAACCAAGAGAACTCAGGTAGCTGCATCACC...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTAACAGGATGGCCTTATaGAACACTGTGGAGCTACCC +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSNRMAL*NTVELP
Trigger: GGGTAGCTCCACAGTGTTTCATAAGGCCATCCTGTT...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp TCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCTCTTGGATGAAACCCAACTaGTGGATCGCATCTATTGCC +
Preference number: 4 (lower is better)
Translates to: SRWMKPNWWIASIARTVSWMKPN*WIASIA
Trigger: GGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA...AGAGACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTACTGGTGTCCCAACTGTaGAATATGCCAGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLLVSQL*NMPVVS
Trigger: GGAGACAACTGGCATATTCCACAGTTGGGACACCAG...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp TCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCAGCCAAGCAAGCCTGGTaGTGCAGCTACCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SGSVVFGTGCKISDSGKSAKQAW*CSYLSS
Trigger: AGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGC...TGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR GCA 90 bp GACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGTAAGAACTCTGTTAGTCCCTGCCGTCATTaGCATAGTAACGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: DSKSSKPSLVLLSRKNSVSPCRH*HSNGNC
Trigger: GCAGTTTCCGTTACTATGGCAATGACGGCAGGGACT...AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR GCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSGCCSP*RHCHSN
Trigger: GTTACTATGGCAATGACGGCAGGGACTACAACAACC...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTAGAGCCAGCTGGCACTaGCAACCAATTCCTATAGTA +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSRASWH*QPIPIV
Trigger: TACTATAGGAATTGGTTGGCAGTGCCAGCTGGCTCT...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp TGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCTCTGAAATGCCTGTATCTTTCTTCTaGACCAACCGCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WMKPNWWIASIARTVSEMPVSFF*TNRTSP
Trigger: TGGAGAGGTGCGGTTGGTCCAGAAGAAAGATACAGG...CATTTCAGAGACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTACTTTCTGCTCGGATATaGGCCACCTGCTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLLSARI*ATCSFS
Trigger: TGAAAAAGAGCAGGTGGCCCATATCCGAGCAGAAAG...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTAAACTCCAGGGAAGAATaGGACTCTCAACAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLNSREE*DSQQSS
Trigger: GCTACTTTGTTGAGAGTCTCATTCTTCCCTGGAGTT...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp TTCTGGACCAACCGCACCTCTCCAAAAGCTCCTCTTCCTATAACTTTCAGAGACCAAAATATCTCTTTCTaGTCGGATATGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: FWTNRTSPKAPLPITFRDQNISF*SDMGHL
Trigger: CAGGTGGCCCATATCCGAGCAGAAAGAGATATTTTG...GTCTCTGAAAGTTATAGGAAGAGGAGCTTTTGGAGAGGTGCGGTTGGTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR CCA 90 bp TGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCTCTGAAATGGGCTTAATATCCCGATaGATGAAACCCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: WMKPNWWIASIARTVSEMGLISR*MKPNWW
Trigger: CCACCAGTTGGGTTTCATCCATCGGGATATTAAGCC...CATTTCAGAGACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTTGTAGTCCGGTTCTGTaGTATTTGGCACTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSCSPVL*YLALVV
Trigger: TACAACCAGTGCCAAATACCACAGAACCGGACTACA...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp TGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCTCTGAAATGCAAGTCTGGTCCTTTTaGGCCGTAAGAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: WMKPNWWIASIARTVSEMQVWSF*AVRTLF
Trigger: AAACAGAGTTCTTACGGCTCAAAAGGACCAGACTTG...CATTTCAGAGACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR TCA 90 bp GTCTGGCTTAATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCGTTCATGTTCTGAAATaGGAAGTCACTTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VWLNIPMDETQLVDRIYCVHVLK*EVTWWV
Trigger: AACCCACCAAGTGACTTCTCATTTCAGAACATGAAC...GCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATTAAGCCAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR TCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTTGTAACCAGTCTGCATaGATACTTCTGGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSCNQSA*ILLEQC
Trigger: ACATTGCTCCAGAAGTATTCATGCAGACTGGTTACA...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTATGTAACCAGTCTGCATaGATACTTCTGGAGCAATGT +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLCNQSA*ILLEQC
Trigger: ACATTGCTCCAGAAGTATTCATGCAGACTGGTTACA...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR GCA 90 bp GCCGTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAAC +
Preference number: 4 (lower is better)
Translates to: AVRTLFLCERVVIDVTFSGCCSP*RHCHSN
Trigger: GTTACTATGGCAATGACGGCAGGGACTACAACAACC...AGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR GCA 90 bp AATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTAGAACTCTGTTTCTTTaGGAGCGTGTTGTGATCGAC +
Preference number: 4 (lower is better)
Translates to: NIPMDETQLVDRIYCQNSRTLFL*ERVVID
Trigger: GTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT...ACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR GCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTAGAGCCAGCTGGCACTaGCAACCAATTCCTATAGTA +
Preference number: 4 (lower is better)
Translates to: EKPSLWICSPVLWYLALVRASWH*QPIPIV
Trigger: TACTATAGGAATTGGTTGGCAGTGCCAGCTGGCTCT...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp AATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTATGAAACCCAACTGGTaGATCGCATCTATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NIPMDETQLVDRIYCQNSMKPNW*IASIAR
Trigger: TCTGGCAATAGATGCGATCCACCAGTTGGGTTTCAT...ACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGGCTTAATATCCCGATaGATGAAACCCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: EKPSLWICSPVLWYLALVGLISR*MKPNWW
Trigger: CCACCAGTTGGGTTTCATCCATCGGGATATTAAGCC...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTTATAGGGATTGCTGCTaGCCTTTCCCTTATGTGCTC +
Preference number: 4 (lower is better)
Translates to: EKPSLWICSPVLWYLALVYRDCC*PFPYVL
Trigger: GAGCACATAAGGGAAAGGCCAGCAGCAATCCCTATA...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR TCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTGGTGATGCAGCTACCTaGGTTCTCTTGGTTATGGGT +
Preference number: 4 (lower is better)
Translates to: SIKDLSGLNTACPQERKIGDAAT*VLLVMG
Trigger: ACCCATAACCAAGAGAACTCAGGTAGCTGCATCACC...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAAGATCTGTCAGGTCTaGATACAGCATGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPKICQV*IQHAHR
Trigger: CCTGTGGGCATGCTGTATTCAGACCTGACAGATCTT...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAGCAGTCCCTGCCGTCATTaGCATAGTAACGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: NKHHHLQEYFSVLLSTPSSPCRH*HSNGNC
Trigger: GCAGTTTCCGTTACTATGGCAATGACGGCAGGGACT...GCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp GTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTGATAGTCCCTGCCGTCATTaGCATAGTAACGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: VRTLFLCERVVIDVTFSDSPCRH*HSNGNC
Trigger: GCAGTTTCCGTTACTATGGCAATGACGGCAGGGACT...ATCAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR GCA 90 bp AGCCGTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCCGGATATGGGCCACCTaGTCTTTTTCAAGCATATCA +
Preference number: 4 (lower is better)
Translates to: SRKNSVSLRACCDRRNFFRIWAT*SFSSIS
Trigger: TGATATGCTTGAAAAAGAGCAGGTGGCCCATATCCG...GAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR GCA 90 bp TATAACTTTCAGAGACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGCACCCAGGCACCATCTaGTTCTACCAAAATATCTCT +
Preference number: 4 (lower is better)
Translates to: YNFQRLKVIQAKSGPFEPHPGTI*FYQNIS
Trigger: AGAGATATTTTGGTAGAAGCAGATGGTGCCTGGGTG...CGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTCTCTGAAAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR GCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACGGCCTTTCCCTTATGTaGTCCCAGTCGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNGLSLM*SQSTPS
Trigger: TGAAGGTGTCGACTGGGAGCACATAAGGGAAAGGCC...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTACACAACCCCCTGGCCTaGATTTACTTCCTTAATTCC +
Preference number: 4 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLHNPLA*IYFLNS
Trigger: GGAATTAAGGAAGTAAATGCAGGCCAGGGGGTTGTG...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp TATAACTTTCAGAGACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: YNFQRLKVIQAKSGPFEPTLSRV*LLIGKV
Trigger: AACCTTTCCTATGAGCAACCATACCCGGGAAAGAGT...CGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTCTCTGAAAGTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR CCA 90 bp AGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTGATGTCCTTTCTGCTCGGATATaGGCCACCTGCTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RTLFLCERVVIDVTFSDVLSARI*ATCSFS
Trigger: TGAAAAAGAGCAGGTGGCCCATATCCGAGCAGAAAG...GACATCAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR CCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTACTGCATGAATACTTCTaGAGCAATGTAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLLHEYF*SNVIWC
Trigger: ACACCAGATTACATTGCTCCAGAAGTATTCATGCAG...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTATATAGGGATTGCTGCTaGCCTTTCCCTTATGTGCTC +
Preference number: 4 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLYRDCC*PFPYVL
Trigger: GAGCACATAAGGGAAAGGCCAGCAGCAATCCCTATA...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTACTACCTGAGTTCTCTTaGTTATGGGTGAATGTTATC +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLLPEFS*LWVNVI
Trigger: GATAACATTCACCCATAACCAAGAGAACTCAGGTAG...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTATACATAGAAGTCACTTaGTGGGTTGTGTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLYIEVT*WVVCEI
Trigger: AATCTCACACACAACCCACCAAGTGACTTCTATGTA...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536093.5
3UTR CAA 72 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATaGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: NKHHHLQEYFSV*LSTPSKPGDAA
Trigger: AGCTGCATCACCAGGCTTGCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
3UTR CAA 72 bp AGTCTGGTCCTTTTGAGCCGTAAGAACTCTGTTTCTTaGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SLVLLSRKNSVS*RACCDRRNFFS
Trigger: AGAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGCTCAAAAGGACCAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR TCA 90 bp AGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTGATGTCCAAGTCTGGTCCTTTTaGGCCGTAAGAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RTLFLCERVVIDVTFSDVQVWSF*AVRTLF
Trigger: AAACAGAGTTCTTACGGCTCAAAAGGACCAGACTTG...GACATCAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR TCA 90 bp CTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCTTCATCTGCTAATCCTTCAAGTCTGGTCCTTTTaGGCCGTAAGAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LCERVVIDVTFSLHLLILQVWSF*AVRTLF
Trigger: AAACAGAGTTCTTACGGCTCAAAAGGACCAGACTTG...AAGGATTAGCAGATGAAGAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR TCA 90 bp TTAATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACATGCCAGAACAGTCTCTaGAATGTAGAACTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LISRWMKPNWWIASIARTCQNSL*NVELCF
Trigger: GAAACACAGTTCTACATTTCAGAGACTGTTCTGGCA...TGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR TCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACGGGAGCGATGTGGGGTaGGAAAATCTCATAAACCTC +
Preference number: 4 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNGSDVG*ENLINL
Trigger: GAGGTTTATGAGATTTTCTCACCCCACATCGCTCCC...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTAAACCCCAAAGATTGTaGATCACTCTATTAACTCCA +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSKPQRL*ITLLTP
Trigger: TGGAGTTAATAGAGTGATTCACAATCTTTGGGGTTT...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp GACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGTAAGAACTCTGTTTTCAGTGCTGCTTGTTaGATGATTTCCAGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: DSKSSKPSLVLLSRKNSVFSAAC*MISSFL
Trigger: GAGAAAACTGGAAATCATTCAACAAGCAGCACTGAA...AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR GCA 90 bp ACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCTTCATCTGAGAACTCTGTTTCTTTaGGAGCGTGTTGTGATCGAC +
Preference number: 4 (lower is better)
Translates to: TLFLCERVVIDVTFSLHLRTLFL*ERVVID
Trigger: GTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT...CAGATGAAGAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR GCA 90 bp CTCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATCGGATATGGGCCACCTaGTCTTTTTCAAGCATATCA +
Preference number: 4 (lower is better)
Translates to: LYQRSVRSEYSMPTGKENRIWAT*SFSSIS
Trigger: TGATATGCTTGAAAAAGAGCAGGTGGCCCATATCCG...ATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp CTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCATCAAAATGGCCTTTCCCTTATGTaGTCCCAGTCGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: LWYLALVVKYQIQGSHQNGLSLM*SQSTPS
Trigger: TGAAGGTGTCGACTGGGAGCACATAAGGGAAAGGCC...ATTTTGATGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR GCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTATTCTATAGGGATTGCTaGTGGCCTTTCCCTTATGTG +
Preference number: 4 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLFYRDC*WPFPYV
Trigger: CACATAAGGGAAAGGCCAGCAGCAATCCCTATAGAA...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR GCA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTAGAACTACCCTTCCAGTaGCAAGAAAGTAAAACTATT +
Preference number: 4 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLELPFQ*QESKTI
Trigger: AATAGTTTTACTTTCTTGGCACTGGAAGGGTAGTTC...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp ATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCTGTCATCATGTCACCTaGTCTTTTTCAAGCATATCA +
Preference number: 4 (lower is better)
Translates to: ISRWMKPNWWIASIARTVCHHVT*SFSSIS
Trigger: TGATATGCTTGAAAAAGAGCAGGTGACATGATGACA...GACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CCA 90 bp ACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCTTCATCTGACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: TLFLCERVVIDVTFSLHLTLSRV*LLIGKV
Trigger: AACCTTTCCTATGAGCAACCATACCCGGGAAAGAGT...CAGATGAAGAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR CCA 90 bp TCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCAATGAAACCCAACTGGTaGATCGCATCTATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: SGSVVFGTGCKISDSGKSMKPNW*IASIAR
Trigger: TCTGGCAATAGATGCGATCCACCAGTTGGGTTTCAT...TGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAGCTGGATGAAACCCAACTaGTGGATCGCATCTATTGCC +
Preference number: 4 (lower is better)
Translates to: NKHHHLQEYFSVLLSTPSWMKPN*WIASIA
Trigger: GGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA...GCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp ATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGCTGGTGTCCCAACTGTaGAATATGCCAGTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ICSPVLWYLALVVKYQIQLVSQL*NMPVVS
Trigger: GGAGACAACTGGCATATTCCACAGTTGGGACACCAG...CTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGACTACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR TCA 90 bp AATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTTTGGTGGGTTGTGTGTaGGATTTCTATAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: NIPMDETQLVDRIYCQNSLVGCV*DFYKIQ
Trigger: CTGAATTTTATAGAAATCTCACACACAACCCACCAA...ACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR TCA 90 bp TGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCTCTGAAATGTTTGAGTTCATGTTCTaGAATGAGAAGTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: WMKPNWWIASIARTVSEMFEFMF*NEKSLG
Trigger: ACCAAGTGACTTCTCATTTCAGAACATGAACTCAAA...CATTTCAGAGACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR GCA 90 bp AAAATATCTCTTTCTGCTCGGATATGGGCCACCTGCTCTTTTTCAAGCATATCAAGAACTCTGTTTCTTTaGGAGCGTGTTGTGATCGAC +
Preference number: 4 (lower is better)
Translates to: KISLSARIWATCSFSSISRTLFL*ERVVID
Trigger: GTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT...TGATATGCTTGAAAAAGAGCAGGTGGCCCATATCCGAGCAGAAAGAGATATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR GCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTCACCCAGGCACCATCTaGTTCTACCAAAATATCTCT +
Preference number: 4 (lower is better)
Translates to: SIKDLSGLNTACPQERKIHPGTI*FYQNIS
Trigger: AGAGATATTTTGGTAGAAGCAGATGGTGCCTGGGTG...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTAGATTTCTATAGGGATTaGTGCTGGCCTTTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLDFYRD*CWPFPY
Trigger: ATAAGGGAAAGGCCAGCAGCAATCCCTATAGAAATC...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR GCA 90 bp TCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCAGATTTCTATAGGGATTaGTGCTGGCCTTTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: SGSVVFGTGCKISDSGKSDFYRD*CWPFPY
Trigger: ATAAGGGAAAGGCCAGCAGCAATCCCTATAGAAATC...TGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAGCACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NKHHHLQEYFSVLLSTPSTLSRV*LLIGKV
Trigger: AACCTTTCCTATGAGCAACCATACCCGGGAAAGAGT...GCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTCCTGTATCTTTCTTCTaGACCAACCGCACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISPVSFF*TNRTSP
Trigger: TGGAGAGGTGCGGTTGGTCCAGAAGAAAGATACAGG...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACGGCTTAATATCCCGATaGATGAAACCCAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNGLISR*MKPNWW
Trigger: CCACCAGTTGGGTTTCATCCATCGGGATATTAAGCC...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTAGATATAGGTACCTCTaGAGGAAATACCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: EKPSLWICSPVLWYLALVRYRYL*RKYQSF
Trigger: GAAACTCTGGTATTTCCTCCAGAGGTACCTATATCT...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTAGAAAAACCCAGTCTTTaGATTTGTAGTCCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLEKPSL*ICSPVL
Trigger: CAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp TTCAAAGCCACAGCACACACAGGCAGAATGGACCTTAATACGCATGTAGGCAGTGAGTTCTCTTGGTTATaGGTGAATGTTATCTTCATT +
Preference number: 4 (lower is better)
Translates to: FKATAHTGRMDLNTHVGSEFSWL*VNVIFI
Trigger: AATGAAGATAACATTCACCCATAACCAAGAGAACTC...ACTGCCTACATGCGTATTAAGGTCCATTCTGCCTGTGTGTGCTGTGGCTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACTTGGGGGAAACAGGATaGCCTTATGAAACACTGTGG +
Preference number: 4 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNLGETG*PYETLW
Trigger: CCACAGTGTTTCATAAGGCCATCCTGTTTCCCCCAA...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTTGCCAGAACAGTCTCTaGAATGTAGAACTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SIKDLSGLNTACPQERKICQNSL*NVELCF
Trigger: GAAACACAGTTCTACATTTCAGAGACTGTTCTGGCA...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTGTTCATGTTCTGAAATaGGAAGTCACTTGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: SIKDLSGLNTACPQERKIVHVLK*EVTWWV
Trigger: AACCCACCAAGTGACTTCTCATTTCAGAACATGAAC...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCATTTCTGTACGTTTCTTaGGGTGTTTCAGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGSVVFGTGCKISDSGKSFLYVS*GVSEQK
Trigger: TTTCTGCTCTGAAACACCTCAAGAAACGTACAGAAA...TGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR TCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGAAGATGGCTTTTACTaGTTATCTAGACCCATAAGA +
Preference number: 4 (lower is better)
Translates to: EKPSLWICSPVLWYLALVEDGFY*LSRPIR
Trigger: TCTTATGGGTCTAGATAATCAGTAAAAGCCATCTTC...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR GCA 90 bp GCCGTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTACTTCTAATTTCTTCTaGCTGGTTTCTCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVRTLFLCERVVIDVTFSTSNFF*LVSLSS
Trigger: TGAAGAGAGAGAAACCAGGCAGAAGAAATTAGAAGT...AGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR GCA 90 bp GTCCCAACTGTGGAATATGCCAGTTGTCTCCTGTTCTTCTTCCAAGTTTCTGCTGTAAAACATCAATACTaGAGTGTTACCTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: VPTVEYASCLLFFFQVSAVKHQY*SVTYRL
Trigger: TAACCTGTAGGTAACACTGCAGTATTGATGTTTTAC...AGCAGAAACTTGGAAGAAGAACAGGAGACAACTGGCATATTCCACAGTTGGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTTGGATGAAACCCAACTaGTGGATCGCATCTATTGCC +
Preference number: 4 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISWMKPN*WIASIA
Trigger: GGCAATAGATGCGATCCACCAGTTGGGTTTCATCCA...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp AATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTATTTTACATGACCCTTaGCATCCAATAAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: NIPMDETQLVDRIYCQNSILHDP*HPIKGC
Trigger: ACAACCTTTTATTGGATGCCAAGGGTCATGTAAAAT...ACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CCA 90 bp ATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGTGTAGTCCGGTTCTGTaGTATTTGGCACTGGTTGTA +
Preference number: 4 (lower is better)
Translates to: ICSPVLWYLALVVKYQIQCSPVL*YLALVV
Trigger: TACAACCAGTGCCAAATACCACAGAACCGGACTACA...CTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGACTACAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAGAAAAACCCAGTCTTTaGATTTGTAGTCCGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPEKPSL*ICSPVL
Trigger: CAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTAATAGAAGTCACTTGGTaGGTTGTGTGTGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLIEVTW*VVCEIS
Trigger: AGAAATCTCACACACAACCCACCAAGTGACTTCTAT...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR TCA 90 bp GTCTTCATATATATTCTACAGATGTCCAAACCAATAGGGCAATGTTCTAACACCCAAGTCTGGTCCTTTTaGGCCGTAAGAACTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VFIYILQMSKPIGQCSNTQVWSF*AVRTLF
Trigger: AAACAGAGTTCTTACGGCTCAAAAGGACCAGACTTG...GGTGTTAGAACATTGCCCTATTGGTTTGGACATCTGTAGAATATATATGAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp CTCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTACAGACTACGTATATaGAGGTCATCAGTATTTCTG +
Preference number: 4 (lower is better)
Translates to: LYQRSVRSEYSMPTGKENYRLRI*RSSVFL
Trigger: CAGAAATACTGATGACCTTCATATACGTAGTCTGTA...ATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACGTCATTATGCCCAGTTaGCTAGATAGGGTTTTGTCA +
Preference number: 4 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNVIMPS*LDRVLS
Trigger: TGACAAAACCCTATCTAGTCAACTGGGCATAATGAC...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp TATAACTTTCAGAGACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGGTTTCTCTCTCTTCATaGTGTAAAATTAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: YNFQRLKVIQAKSGPFEPVSLSS*CKIRLL
Trigger: TAGCAACCTAATTTTACAGCATGAAGAGAGAGAAAC...CGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTCTCTGAAAGTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR GCA 90 bp GTCTTCATATATATTCTACAGATGTCCAAACCAATAGGGCAATGTTCTAACACCAGAACTCTGTTTCTTTaGGAGCGTGTTGTGATCGAC +
Preference number: 4 (lower is better)
Translates to: VFIYILQMSKPIGQCSNTRTLFL*ERVVID
Trigger: GTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT...GGTGTTAGAACATTGCCCTATTGGTTTGGACATCTGTAGAATATATATGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp TTAATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACATCTCAATATCTTCATTaGATAGATATGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: LISRWMKPNWWIASIARTSQYLH*IDMACI
Trigger: GATACAGGCCATATCTATGCAATGAAGATATTGAGA...TGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR GCA 90 bp AGCCGTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCTCAATATCTTCATTaGATAGATATGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: SRKNSVSLRACCDRRNFFSQYLH*IDMACI
Trigger: GATACAGGCCATATCTATGCAATGAAGATATTGAGA...GAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR GCA 90 bp ATAACTTTCAGAGACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGTTCTCAATATCTTCATTaGATAGATATGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: ITFRDSKSSKPSLVLLSRSQYLH*IDMACI
Trigger: GATACAGGCCATATCTATGCAATGAAGATATTGAGA...ACGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTCTCTGAAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR GCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTCAAAATATCTCTTTCTaGTCGGATATGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLQNISF*SDMGHL
Trigger: CAGGTGGCCCATATCCGAGCAGAAAGAGATATTTTG...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp GTCTTCATATATATTCTACAGATGTCCAAACCAATAGGGCAATGTTCTAACACCTTCTATAGGGATTGCTaGTGGCCTTTCCCTTATGTG +
Preference number: 4 (lower is better)
Translates to: VFIYILQMSKPIGQCSNTFYRDC*WPFPYV
Trigger: CACATAAGGGAAAGGCCAGCAGCAATCCCTATAGAA...GGTGTTAGAACATTGCCCTATTGGTTTGGACATCTGTAGAATATATATGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTATGAAACCCAACTGGTaGATCGCATCTATTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISMKPNW*IASIAR
Trigger: TCTGGCAATAGATGCGATCCACCAGTTGGGTTTCAT...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp GAAAAACCCAGTCTTTGGATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTATTTTACATGACCCTTaGCATCCAATAAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: EKPSLWICSPVLWYLALVILHDP*HPIKGC
Trigger: ACAACCTTTTATTGGATGCCAAGGGTCATGTAAAAT...AACCAGTGCCAAATACCACAGAACCGGACTACAAATCCAAAGACTGGGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CCA 90 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAGCAGCCAGGGACCTCTATaGACTAAATTCTCAATTCAT +
Preference number: 4 (lower is better)
Translates to: NKHHHLQEYFSVLLSTPSSQGPL*TKFSIH
Trigger: ATGAATTGAGAATTTAGTCCATAGAGGTCCCTGGCT...GCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCACAGGGAGAAATTCCATaGTTAGATAAAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPQGEIP*LDKDSS
Trigger: AGAGGAATCTTTATCTAATCATGGAATTTCTCCCTG...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCATTGGTGGGTTGTGTGTaGGATTTCTATAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPLVGCV*DFYKIQ
Trigger: CTGAATTTTATAGAAATCTCACACACAACCCACCAA...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp TTTGCAGTAAAACATCAATACTGCAGTGTTACCTACAGGTTAGCCTATGTTGCTGTGTTTCTCCTGAATTaGTTAGAGGTGTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: FAVKHQYCSVTYRLAYVAVFLLN*LEVLQF
Trigger: GAACTGTAACACCTCTAATCAATTCAGGAGAAACAC...AGCAACATAGGCTAACCTGTAGGTAACACTGCAGTATTGATGTTTTACTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp ATTTGTAGTCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGTGTTTCTCCTGAATTaGTTAGAGGTGTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: ICSPVLWYLALVVKYQIQVFLLN*LEVLQF
Trigger: GAACTGTAACACCTCTAATCAATTCAGGAGAAACAC...CTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGACTACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR TCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTGAAGATGGCTTTTACTaGTTATCTAGACCCATAAGA +
Preference number: 4 (lower is better)
Translates to: SIKDLSGLNTACPQERKIEDGFY*LSRPIR
Trigger: TCTTATGGGTCTAGATAATCAGTAAAAGCCATCTTC...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp AGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTGATGTCGTTTCTCTCTCTTCATaGTGTAAAATTAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: RTLFLCERVVIDVTFSDVVSLSS*CKIRLL
Trigger: TAGCAACCTAATTTTACAGCATGAAGAGAGAGAAAC...GACATCAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544367.5
3UTR CAA 72 bp TACCCAGCAGCAACATTTATAAAAGCTTGTGTAGATTaGCATAATGCTCCTATGCAATTCTTCCCCATTAGG +
Preference number: 4 (lower is better)
Translates to: YPAATFIKACVD*HNAPMQFFPIR
Trigger: CCTAATGGGGAAGAATTGCATAGGAGCATTATGCAAATCTACACAAGCTTTTATAAATGTTGCTGCTGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp TTTGCAGTAAAACATCAATACTGCAGTGTTACCTACAGGTTAGCCTATGTTGCTTTGGTGGGTTGTGTGTaGGATTTCTATAAAATTCAG +
Preference number: 4 (lower is better)
Translates to: FAVKHQYCSVTYRLAYVALVGCV*DFYKIQ
Trigger: CTGAATTTTATAGAAATCTCACACACAACCCACCAA...AGCAACATAGGCTAACCTGTAGGTAACACTGCAGTATTGATGTTTTACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTTTTCTGTACGTTTCTTaGGGTGTTTCAGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISFLYVS*GVSEQK
Trigger: TTTCTGCTCTGAAACACCTCAAGAAACGTACAGAAA...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACTGTCACTCCTTACTGTaGAGTTTGTGTAATAACTTG +
Preference number: 4 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNCHSLL*SLCNNL
Trigger: CAAGTTATTACACAAACTTCACAGTAAGGAGTGACA...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR TCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTCAGTACATCTCCCTATaGGTATACAGACTACGTATA +
Preference number: 4 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLQYISL*VYRLRI
Trigger: TATACGTAGTCTGTATACTCATAGGGAGATGTACTG...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCATCTCAATATCTTCATTaGATAGATATGGCCTGTATC +
Preference number: 4 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPSQYLH*IDMACI
Trigger: GATACAGGCCATATCTATGCAATGAAGATATTGAGA...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTATTTTACATGACCCTTaGCATCCAATAAAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: SIKDLSGLNTACPQERKIILHDP*HPIKGC
Trigger: ACAACCTTTTATTGGATGCCAAGGGTCATGTAAAAT...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTCTGCATGAATACTTCTaGAGCAATGTAATCTGGTGT +
Preference number: 4 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISLHEYF*SNVIWC
Trigger: ACACCAGATTACATTGCTCCAGAAGTATTCATGCAG...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTAGATATAGGTACCTCTaGAGGAAATACCAGAGTTTC +
Preference number: 4 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLRYRYL*RKYQSF
Trigger: GAAACTCTGGTATTTCCTCCAGAGGTACCTATATCT...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAGCGAGTTCTCTTGGTTATaGGTGAATGTTATCTTCATT +
Preference number: 4 (lower is better)
Translates to: NKHHHLQEYFSVLLSTPSEFSWL*VNVIFI
Trigger: AATGAAGATAACATTCACCCATAACCAAGAGAACTC...GCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR TCA 90 bp GTCTTCATATATATTCTACAGATGTCCAAACCAATAGGGCAATGTTCTAACACCTTTGAGTTCATGTTCTaGAATGAGAAGTCACTTGGT +
Preference number: 4 (lower is better)
Translates to: VFIYILQMSKPIGQCSNTFEFMF*NEKSLG
Trigger: ACCAAGTGACTTCTCATTTCAGAACATGAACTCAAA...GGTGTTAGAACATTGCCCTATTGGTTTGGACATCTGTAGAATATATATGAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTACTTCTAATTTCTTCTaGCTGGTTTCTCTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLTSNFF*LVSLSS
Trigger: TGAAGAGAGAGAAACCAGGCAGAAGAAATTAGAAGT...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp TTTGCAGTAAAACATCAATACTGCAGTGTTACCTACAGGTTAGCCTATGTTGCTGTAAAACATCAATACTaGAGTGTTACCTACAGGTTA +
Preference number: 4 (lower is better)
Translates to: FAVKHQYCSVTYRLAYVAVKHQY*SVTYRL
Trigger: TAACCTGTAGGTAACACTGCAGTATTGATGTTTTAC...AGCAACATAGGCTAACCTGTAGGTAACACTGCAGTATTGATGTTTTACTGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CCA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTTACAAGCAGCCTTCATaGTCATGTCTTAAATTCAAC +
Preference number: 4 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLYKQPS*SCLKFN
Trigger: GTTGAATTTAAGACATGACCATGAAGGCTGCTTGTA...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR GCA 90 bp AATACAGTACATCTCCCTATGAGTATACAGACTACGTATATGAAGGTCATCAGTGTTTCTCTCTCTTCATaGTGTAAAATTAGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: NTVHLPMSIQTTYMKVISVSLSS*CKIRLL
Trigger: TAGCAACCTAATTTTACAGCATGAAGAGAGAGAAAC...ACTGATGACCTTCATATACGTAGTCTGTATACTCATAGGGAGATGTACTGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS GCA 90 bp TCTTTCCCGGGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACTGCCTCCGGTCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: SFPGMVAHRKGCCSP*RHCHSNGNCLRSRP
Trigger: CGGGCGCGACCGGAGGCAGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389032.8
ENST00000434385.2
ENST00000539863.1
ENST00000544367.5
ENST00000545470.5
ENST00000546286.5
CDS GCA 90 bp TCTTTCCCGGGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACACAGCCGGAAGTAGCCTT +
Preference number: 5 (lower is better)
Translates to: SFPGMVAHRKGCCSP*RHCHSNGNTAGSSL
Trigger: AAGGCTACTTCCGGCTGTGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541191.5
CDS CCA 90 bp AAATTCTCCAATGTGAGCTTGGCTACAGTCACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTGCCGTCATTGCC +
Preference number: 5 (lower is better)
Translates to: KFSNVSLATVTLSRV*LLIGKVVVVPAVIA
Trigger: GGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGAGTGACTGTAGCCAAGCTCACATTGGAGAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389032.8
ENST00000434385.2
ENST00000539863.1
ENST00000540996.5
ENST00000541191.5
ENST00000543246.5
ENST00000544367.5
ENST00000544969.5
ENST00000545470.5
ENST00000546286.5
CDS-3UTR CAA 90 bp GTCCCAACTGTGGAATATGCCAGTTGTCTCCTGTTCTTCTTCCAAGTTTCTGCTGGGGATAGAGCCACGTaGAGTCAACCCTTCAAACCT +
Preference number: 5 (lower is better)
Translates to: VPTVEYASCLLFFFQVSAGDRAT*SQPFKP
Trigger: AGGTTTGAAGGGTTGACTCAACGTGGCTCTATCCCC...AGCAGAAACTTGGAAGAAGAACAGGAGACAACTGGCATATTCCACAGTTGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CAA 90 bp ATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCCCAAGTCTGGTCCTTTaGAGCCGTAAGAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: ISRWMKPNWWIASIARTVPSLVL*SRKNSV
Trigger: AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGG...GACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CAA 90 bp GTCTGGCTTAATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCGGTGGATCGCATCTATaGCCAGAACAGTCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: VWLNIPMDETQLVDRIYCGGSHL*PEQSLK
Trigger: TTTCAGAGACTGTTCTGGCAATAGATGCGATCCACC...GCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATTAAGCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CAA 90 bp GACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGTAAGAACTCTGTTTTCTCCAATGTGAGCTaGGCTACAGTCACTCTTTCC +
Preference number: 5 (lower is better)
Translates to: DSKSSKPSLVLLSRKNSVFSNVS*ATVTLS
Trigger: GGAAAGAGTGACTGTAGCCAAGCTCACATTGGAGAA...AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR CAA 90 bp ATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGTCAAGAACTCTGTTTCTTaGCGAGCGTGTTGTGATCGA +
Preference number: 5 (lower is better)
Translates to: ISRWMKPNWWIASIARTVKNSVS*RACCDR
Trigger: TCGATCACAACACGCTCGCAAAGAAACAGAGTTCTT...GACTGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CAA 90 bp TTCTGGACCAACCGCACCTCTCCAAAAGCTCCTCTTCCTATAACTTTCAGAGACAAGAACTCTGTTTCTTaGCGAGCGTGTTGTGATCGA +
Preference number: 5 (lower is better)
Translates to: FWTNRTSPKAPLPITFRDKNSVS*RACCDR
Trigger: TCGATCACAACACGCTCGCAAAGAAACAGAGTTCTT...GTCTCTGAAAGTTATAGGAAGAGGAGCTTTTGGAGAGGTGCGGTTGGTCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR CAA 90 bp CTCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATGGGGATAGAGCCACGTaGAGTCAACCCTTCAAACCT +
Preference number: 5 (lower is better)
Translates to: LYQRSVRSEYSMPTGKENGDRAT*SQPFKP
Trigger: AGGTTTGAAGGGTTGACTCAACGTGGCTCTATCCCC...ATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS GCA 90 bp TCTTTCCCGGGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAAAGAATTATGCTGTTCACAG +
Preference number: 5 (lower is better)
Translates to: SFPGMVAHRKGCCSP*RHCHSNGKELCCSQ
Trigger: CTGTGAACAGCATAATTCTTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544969.5
CDS-3UTR CAA 90 bp AGCCGTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCCTTTCCCGGGTATGGTaGCTCATAGGAAAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: SRKNSVSLRACCDRRNFFLSRVW*LIGKVV
Trigger: AACAACCTTTCCTATGAGCAACCATACCCGGGAAAG...GAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR CAA 90 bp GCCGTAAGAACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCCAAGTCTGGTCCTTTaGAGCCGTAAGAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: AVRTLFLCERVVIDVTFSPSLVL*SRKNSV
Trigger: AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGG...AGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGTTCTTACGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000544367.5
ENST00000546286.5
CDS-3UTR CAA 90 bp TGTTATCTACGCCAAGCAAGCCTGGTGATGCAGCTACCTGAGTTCTCTTGGTTACCGGTTCTGTGGTATTaGGCACTGGTTGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: CYLRQASLVMQLPEFSWLPVLWY*ALVVKY
Trigger: ATATTTTACAACCAGTGCCAAATACCACAGAACCGG...TAACCAAGAGAACTCAGGTAGCTGCATCACCAGGCTTGCTTGGCGTAGATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS GCA 90 bp TCTTTCCCGGGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACTATTTTGAGATCAGGATT +
Preference number: 5 (lower is better)
Translates to: SFPGMVAHRKGCCSP*RHCHSNGNYFEIRI
Trigger: AATCCTGATCTCAAAATAGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543246.5
CDS-3UTR CAA 90 bp CTTCTACCAAAATATCTCTTTCTGCTCGGATATGGGCCACCTGCTCTTTTTCAACTTTCCCGGGTATGGTaGCTCATAGGAAAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: LLPKYLFLLGYGPPALFQLSRVW*LIGKVV
Trigger: AACAACCTTTCCTATGAGCAACCATACCCGGGAAAG...TTGAAAAAGAGCAGGTGGCCCATATCCGAGCAGAAAGAGATATTTTGGTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR CAA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTACCAAGTCTGGTCCTTTaGAGCCGTAAGAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLPSLVL*SRKNSV
Trigger: AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGG...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp CTTCTACCAAAATATCTCTTTCTGCTCGGATATGGGCCACCTGCTCTTTTTCAACCAAGTCTGGTCCTTTaGAGCCGTAAGAACTCTGTT +
Preference number: 5 (lower is better)
Translates to: LLPKYLFLLGYGPPALFQPSLVL*SRKNSV
Trigger: AACAGAGTTCTTACGGCTCAAAAGGACCAGACTTGG...TTGAAAAAGAGCAGGTGGCCCATATCCGAGCAGAAAGAGATATTTTGGTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544367.5
CDS-3UTR CAA 90 bp CTCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATGGTGGATCGCATCTATaGCCAGAACAGTCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: LYQRSVRSEYSMPTGKENGGSHL*PEQSLK
Trigger: TTTCAGAGACTGTTCTGGCAATAGATGCGATCCACC...ATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTTTCTCCAATGTGAGCTaGGCTACAGTCACTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SIKDLSGLNTACPQERKIFSNVS*ATVTLS
Trigger: GGAAAGAGTGACTGTAGCCAAGCTCACATTGGAGAA...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp CTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCTTCATCTGCTAATCCTTAAGAACTCTGTTTCTTaGCGAGCGTGTTGTGATCGA +
Preference number: 5 (lower is better)
Translates to: LCERVVIDVTFSLHLLILKNSVS*RACCDR
Trigger: TCGATCACAACACGCTCGCAAAGAAACAGAGTTCTT...AAGGATTAGCAGATGAAGAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR CAA 90 bp TTAATATCCCGATGGATGAAACCCAACTGGTGGATCGCATCTATTGCCAGAACAGCATCCAATAAAAGGTaGTCTGGCTTAATATCCCGA +
Preference number: 5 (lower is better)
Translates to: LISRWMKPNWWIASIARTASNKR*SGLISR
Trigger: TCGGGATATTAAGCCAGACAACCTTTTATTGGATGC...TGTTCTGGCAATAGATGCGATCCACCAGTTGGGTTTCATCCATCGGGATATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407753.2
CDS-3UTR CAA 90 bp TCCGGTTCTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCATGTGGAATATGCCAGTaGTCTCCTGTTCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SGSVVFGTGCKISDSGKSCGICQ*SPVLLP
Trigger: TGGAAGAAGAACAGGAGACAACTGGCATATTCCACA...TGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAGAACCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CAA 90 bp TTCAGAGACTCAAAGTCATCCAAGCCAAGTCTGGTCCTTTTGAGCCGTAAGAACCTTCAGTGCTGCTTGTaGAATGATTTCCAGTTTTCT +
Preference number: 5 (lower is better)
Translates to: FRDSKSSKPSLVLLSRKNLQCCL*NDFQFS
Trigger: AGAAAACTGGAAATCATTCAACAAGCAGCACTGAAG...GTTCTTACGGCTCAAAAGGACCAGACTTGGCTTGGATGACTTTGAGTCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR CAA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTTGTGGAATATGCCAGTaGTCTCCTGTTCTTCTTCCA +
Preference number: 5 (lower is better)
Translates to: SIKDLSGLNTACPQERKICGICQ*SPVLLP
Trigger: TGGAAGAAGAACAGGAGACAACTGGCATATTCCACA...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp ACTCTGTTTCTTTGCGAGCGTGTTGTGATCGACGTAACTTTTTCTCTTCATCTGGCACTTCAGTGCTGCTaGTTGAATGATTTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: TLFLCERVVIDVTFSLHLALQCC*LNDFQF
Trigger: AAACTGGAAATCATTCAACAAGCAGCACTGAAGTGC...CAGATGAAGAGAAAAAGTTACGTCGATCACAACACGCTCGCAAAGAAACAGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546286.5
CDS-3UTR CAA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTCTTTCCCGGGTATGGTaGCTCATAGGAAAGGTTGTT +
Preference number: 5 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLLSRVW*LIGKVV
Trigger: AACAACCTTTCCTATGAGCAACCATACCCGGGAAAG...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTGGTGGATCGCATCTATaGCCAGAACAGTCTCTGAAA +
Preference number: 5 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLGGSHL*PEQSLK
Trigger: TTTCAGAGACTGTTCTGGCAATAGATGCGATCCACC...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CAA 90 bp AATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCAAGCGCATCCAATAAAAGGTaGTCTGGCTTAATATCCCGA +
Preference number: 5 (lower is better)
Translates to: NKHHHLQEYFSVLLSTPSASNKR*SGLISR
Trigger: TCGGGATATTAAGCCAGACAACCTTTTATTGGATGC...GCTTGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CAA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTCAAAGGAGAATGTGTTaGGTAGCCAGGGACCTCTAT +
Preference number: 5 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLQRRMC*VARDLY
Trigger: ATAGAGGTCCCTGGCTACCAAACACATTCTCCTTTG...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp GACCTTAATACGCATGTAGGCAGTGCAGTTAGAAAGGGATGTCTGTTCCTTTTAACCTTCAATGAAATTTaGTCCTCATGCCACCAAAAC +
Preference number: 5 (lower is better)
Translates to: DLNTHVGSAVRKGCLFLLTFNEI*SSCHQN
Trigger: GTTTTGGTGGCATGAGGACAAAATTTCATTGAAGGT...TAAAAGGAACAGACATCCCTTTCTAACTGCACTGCCTACATGCGTATTAAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp GTCTTCATATATATTCTACAGATGTCCAAACCAATAGGGCAATGTTCTAACACCAAGAACTCTGTTTCTTaGCGAGCGTGTTGTGATCGA +
Preference number: 5 (lower is better)
Translates to: VFIYILQMSKPIGQCSNTKNSVS*RACCDR
Trigger: TCGATCACAACACGCTCGCAAAGAAACAGAGTTCTT...GGTGTTAGAACATTGCCCTATTGGTTTGGACATCTGTAGAATATATATGAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTCTCTGTTCAAGATCTTaGGTACATTTGGAGCATAAG +
Preference number: 5 (lower is better)
Translates to: SIKDLSGLNTACPQERKILCSRS*VHLEHK
Trigger: CTTATGCTCCAAATGTACCAAAGATCTTGAACAGAG...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTGCATCCAATAAAAGGTaGTCTGGCTTAATATCCCGA +
Preference number: 5 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLASNKR*SGLISR
Trigger: TCGGGATATTAAGCCAGACAACCTTTTATTGGATGC...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CAA 90 bp AGATACCCAAAGAATTTGATGCTGATATTATCTCCCCTATCCTCTCATCACAACCTGAGAATTAAGTCCTaGGCTTTCTCAGATATAGGT +
Preference number: 5 (lower is better)
Translates to: RYPKNLMLILSPLSSHHNLRIKS*AFSDIG
Trigger: ACCTATATCTGAGAAAGCCAAGGACTTAATTCTCAG...GTTGTGATGAGAGGATAGGGGAGATAATATCAGCATCAAATTCTTTGGGTATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp CTGTGGTATTTGGCACTGGTTGTAAAATATCAGATTCAGGGAAGTCATCAAAATCCGGTTCTGTGGTATTaGGCACTGGTTGTAAAATAT +
Preference number: 5 (lower is better)
Translates to: LWYLALVVKYQIQGSHQNPVLWY*ALVVKY
Trigger: ATATTTTACAACCAGTGCCAAATACCACAGAACCGG...ATTTTGATGACTTCCCTGAATCTGATATTTTACAACCAGTGCCAAATACCACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536093.5
CDS-3UTR CAA 90 bp GTCAATAAGCACCACCATCTTCAGGAGTATTTCAGTGTATTGTTATCTACGCCATGTGTTTCTCCTGAATaGATTAGAGGTGTTACAGTT +
Preference number: 5 (lower is better)
Translates to: VNKHHHLQEYFSVLLSTPCVSPE*IRGVTV
Trigger: AACTGTAACACCTCTAATCAATTCAGGAGAAACACA...TGGCGTAGATAACAATACACTGAAATACTCCTGAAGATGGTGGTGCTTATTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CAA 90 bp TCTATCAAAGATCTGTCAGGTCTGAATACAGCATGCCCACAGGAAAGGAAAATTAAAGCTTGTGTAGATTaGCATAATGCTCCTATGCAA +
Preference number: 5 (lower is better)
Translates to: SIKDLSGLNTACPQERKIKACVD*HNAPMQ
Trigger: TTGCATAGGAGCATTATGCAAATCTACACAAGCTTT...AATTTTCCTTTCCTGTGGGCATGCTGTATTCAGACCTGACAGATCTTTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS TCA 90 bp AAGTTTATACCCACCAAACATGTGCGACAAGAAACCAAACAACCCTaGGTGCTCTATTTAACAGTCAAAAATGCCACCATTCATCAATTT +
Preference number: 5 (lower is better)
Translates to: KFIPTKHVRQETKQP*VLYLTVKNATIHQF
Trigger: AAATTGATGAATGGTGGCATTTTTGACTGTTAAATAGAGCACTCAGGGTTGTTTGGTTTCTTGTCGCACATGTTTGGTGGGTATAAACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543992.1
CDS-3UTR CAA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTCTGAGAATTAAGTCCTaGGCTTTCTCAGATATAGGT +
Preference number: 5 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLLRIKS*AFSDIG
Trigger: ACCTATATCTGAGAAAGCCAAGGACTTAATTCTCAG...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CAA 90 bp TTTGCAGTAAAACATCAATACTGCAGTGTTACCTACAGGTTAGCCTATGTTGCTTGTGTTTCTCCTGAATaGATTAGAGGTGTTACAGTT +
Preference number: 5 (lower is better)
Translates to: FAVKHQYCSVTYRLAYVACVSPE*IRGVTV
Trigger: AACTGTAACACCTCTAATCAATTCAGGAGAAACACA...AGCAACATAGGCTAACCTGTAGGTAACACTGCAGTATTGATGTTTTACTGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389032.8
ENST00000536093.5
CDS-3UTR CAA 90 bp AGAAATCCTAATCCTGTAGAATTTCCTCTTGTAGTCAATAAGCACCACCATCTTATATTAGTGGAGTGCTaGAGTGAAGGTGTTAAACTT +
Preference number: 5 (lower is better)
Translates to: RNPNPVEFPLVVNKHHHLILVEC*SEGVKL
Trigger: AAGTTTAACACCTTCACTCAAGCACTCCACTAATAT...AAGATGGTGGTGCTTATTGACTACAAGAGGAAATTCTACAGGATTAGGATTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS-3UTR CAA 90 bp GTCTTCATATATATTCTACAGATGTCCAAACCAATAGGGCAATGTTCTAACACCAGATACCCAAAGAATTaGATGCTGATATTATCTCCC +
Preference number: 5 (lower is better)
Translates to: VFIYILQMSKPIGQCSNTRYPKN*MLILSP
Trigger: GGGAGATAATATCAGCATCAAATTCTTTGGGTATCT...GGTGTTAGAACATTGCCCTATTGGTTTGGACATCTGTAGAATATATATGAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389032.8
CDS CAA 72 bp CTCCGCCTGGTGAAGGCCAGACTGGTTTTGAGGGAGTaGACTGAACTGTCGCCACTTCCCCTCTCACCAGCC +
Preference number: 6 (lower is better)
Translates to: LRLVKARLVLRE*TELSPLPLSPA
Trigger: GGCTGGTGAGAGGGGAAGTGGCGACAGTTCAGTCAACTCCCTCAAAACCAGTCTGGCCTTCACCAGGCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541191.5
CDS TCA 72 bp ACTTCTCCAGACTGTGCAGCCCATTTCATTTTCAAATaGAATTCAGATGCCTGCCTCCGGTCGCGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: TSPDCAAHFIFK*NSDACLRSRPR
Trigger: CCGCGGGCGCGACCGGAGGCAGGCATCTGAATTTCATTTGAAAATGAAATGGGCTGCACAGTCTGGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540996.5
CDS CAA 72 bp GTGAGCTTGGCTACAGTCACTCTTTCCCGGGTATGGTaGCTCATAGGAAAGGTTGTTGTAGTCCCTGCCGTC +
Preference number: 6 (lower is better)
Translates to: VSLATVTLSRVW*LIGKVVVVPAV
Trigger: GACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGAGTGACTGTAGCCAAGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389032.8
ENST00000434385.2
ENST00000539863.1
ENST00000540996.5
ENST00000541191.5
ENST00000543246.5
ENST00000544367.5
ENST00000544969.5
ENST00000545470.5
ENST00000546286.5
CDS GCA 72 bp GGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACTGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: GMVAHRKGCCSP*RHCHSNGNCLR
Trigger: CCGGAGGCAGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000389032.8
ENST00000434385.2
ENST00000539863.1
ENST00000544367.5
ENST00000545470.5
ENST00000546286.5
CDS GCA 72 bp GGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACACAGCCGGA +
Preference number: 6 (lower is better)
Translates to: GMVAHRKGCCSP*RHCHSNGNTAG
Trigger: TCCGGCTGTGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541191.5
CDS CCA 72 bp AATGTGAGCTTGGCTACAGTCACTCTTTCCCGGGTATaGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTGCC +
Preference number: 6 (lower is better)
Translates to: NVSLATVTLSRV*LLIGKVVVVPA
Trigger: GGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGAGTGACTGTAGCCAAGCTCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389032.8
ENST00000434385.2
ENST00000539863.1
ENST00000540996.5
ENST00000541191.5
ENST00000543246.5
ENST00000544367.5
ENST00000544969.5
ENST00000545470.5
ENST00000546286.5
CDS CAA 90 bp TTCTCCAATGTGAGCTTGGCTACAGTCACTCTTTCCCGGGTATGGTaGCTCATAGGAAAGGTTGTTGTAGTCCCTGCCGTCATTGCCATA +
Preference number: 6 (lower is better)
Translates to: FSNVSLATVTLSRVW*LIGKVVVVPAVIAI
Trigger: TATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACCCGGGAAAGAGTGACTGTAGCCAAGCTCACATTGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000389032.8
ENST00000434385.2
ENST00000539863.1
ENST00000540996.5
ENST00000541191.5
ENST00000543246.5
ENST00000544367.5
ENST00000544969.5
ENST00000545470.5
ENST00000546286.5
CDS TCA 72 bp TTATACGTGGGAGTTTGGGTTAAATACCCACCTTCCTaGAACAGGATCCGTGGGGAGCTCACTGGTATTGAT +
Preference number: 6 (lower is better)
Translates to: LYVGVWVKYPPS*NRIRGELTGID
Trigger: ATCAATACCAGTGAGCTCCCCACGGATCCTGTTTCAGGAAGGTGGGTATTTAACCCAAACTCCCACGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543992.1
CDS GCA 72 bp GGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACTTTGGATGG +
Preference number: 6 (lower is better)
Translates to: GMVAHRKGCCSP*RHCHSNGNFGW
Trigger: CCATCCAAAGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540996.5
CDS GCA 72 bp GGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAAAGAATTATGC +
Preference number: 6 (lower is better)
Translates to: GMVAHRKGCCSP*RHCHSNGKELC
Trigger: GCATAATTCTTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544969.5
CDS GCA 72 bp GGTATGGTTGCTCATAGGAAAGGTTGTTGTAGTCCCTaGCGTCATTGCCATAGTAACGGAAACTATTTTGAG +
Preference number: 6 (lower is better)
Translates to: GMVAHRKGCCSP*RHCHSNGNYFE
Trigger: CTCAAAATAGTTTCCGTTACTATGGCAATGACGGCAGGGACTACAACAACCTTTCCTATGAGCAACCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543246.5
CDS CCA 72 bp TACCTGAAAAGCTATGTAGATAACCACTTTTATACGTaGGAGTTTGGGTTAAATACCCACCTTCCTGAAACA +
Preference number: 6 (lower is better)
Translates to: YLKSYVDNHFYT*EFGLNTHLPET
Trigger: TGTTTCAGGAAGGTGGGTATTTAACCCAAACTCCCACGTATAAAAGTGGTTATCTACATAGCTTTTCAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543992.1