RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK32A (Homo sapiens)

Ensembl gene IDs: ENSG00000169302

Ensembl transcript IDs: ENST00000306304.10, ENST00000397936.8, ENST00000398523.3, ENST00000503384.1, ENST00000503975.1, ENST00000506091.1, ENST00000510953.1, ENST00000515832.1, ENST00000626951.2, ENST00000648628.1

Found 513 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGAGGGTGTACTaGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTATAGCTGGG +
Preference number: 1 (lower is better)
Translates to: GLTALRIYSRSLRVY*RWAALSQCKSLIAG
Trigger: CCCAGCTATAAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 90 bp TCGAGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTaGAAGAGCCTTATAGCTGGGATGCTCTTGGACTTCAAAACCTGC +
Preference number: 1 (lower is better)
Translates to: SRSLRVYWRWAALSQ*KSLIAGMLLDFKTC
Trigger: GCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 90 bp GTTGCTGTTCATTCCTGCCCTAGCAATGACCTCAGGCAAAACCAGTaGCACCATGGCAGTGGGTTAGCCATTAGCAGACGACTTCCTGGA +
Preference number: 1 (lower is better)
Translates to: VAVHSCPSNDLRQNQ*HHGSGLAISRRLPG
Trigger: TCCAGGAAGTCGTCTGCTAATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCAGGAATGAACAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 90 bp GTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTATAGCTaGGATGCTCTTGGACTTCAAAACCTGCTCAGACTTTGCAGATGC +
Preference number: 1 (lower is better)
Translates to: VLEVGSSVTVQEPYS*DALGLQNLLRLCRC
Trigger: GCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 90 bp CAGTGCAAGAGCCTTATAGCTGGGATGCTCTTGGACTTCAAAACCTaGTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGG +
Preference number: 1 (lower is better)
Translates to: QCKSLIAGMLLDFKT*SDFADAPYRQGKHW
Trigger: CCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 90 bp CTGCATAAAAGACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTaGCTGGCTTCCCAAATGGGCATCAGTCAGGTCTTCGCAGTTGCC +
Preference number: 1 (lower is better)
Translates to: LHKRQPSLFLRSIFT*LASQMGISQVFAVA
Trigger: GGCAACTGCGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGTCTTTTATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 90 bp CATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATaGGCATCAGTCAGGTCTTCGCAGTTGCCAGCTTACTGCCATCTT +
Preference number: 1 (lower is better)
Translates to: HLCFFGPFSLAWLPK*ASVRSSQLPAYCHL
Trigger: AAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR TCA 90 bp CATCAGTCAGGTCTTCGCAGTTGCCAGCTTACTGCCATCTTGGTGTaGCACATGCTCTCCATAAGTAAGGACAGGTTTAGGTACTCTGAG +
Preference number: 1 (lower is better)
Translates to: HQSGLRSCQLTAILV*HMLSISKDRFRYSE
Trigger: CTCAGAGTACCTAAACCTGTCCTTACTTATGGAGAGCATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGACTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 90 bp ATAAAAGACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTaGCTTCCCAAATGGGCATCAGTCAGGTCTTCGCAGTTGCCAGCT +
Preference number: 1 (lower is better)
Translates to: IKDSHLCFFGPFSLA*LPKWASVRSSQLPA
Trigger: AGCTGGCAACTGCGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGTCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 90 bp TATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTaGCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAGTT +
Preference number: 1 (lower is better)
Translates to: YMLQLNRSTCFPFEG*QISCLFTTAQISEV
Trigger: AACTTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR TCA 90 bp TTCCTTATCTTTATCCAAGTAGCCTGGGGCATTCTGACCACTTTATaGAACTTTCGAGGTCTGAAAAGTCTCACTGAGTCCTGTGTCCAT +
Preference number: 1 (lower is better)
Translates to: FLIFIQVAWGILTTL*NFRGLKSLTESCVH
Trigger: ATGGACACAGGACTCAGTGAGACTTTTCAGACCTCGAAAGTTTCATAAAGTGGTCAGAATGCCCCAGGCTACTTGGATAAAGATAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 90 bp GATTGTATCGGGTTCCCATCCCATCATAAATGTATACGTGTGAAATaGCACTATGGCTTAACTCTCATCACAGTGGAGATCCTAATGGTT +
Preference number: 1 (lower is better)
Translates to: DCIGFPSHHKCIRVK*HYGLTLITVEILMV
Trigger: AACCATTAGGATCTCCACTGTGATGAGAGTTAAGCCATAGTGCCATTTCACACGTATACATTTATGATGGGATGGGAACCCGATACAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR TCA 90 bp CGCATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCTGATAGAATTCCTTATCTTTATCCA +
Preference number: 1 (lower is better)
Translates to: RISLEGPHPSLLLLI*FHSCLPDRIPYLYP
Trigger: TGGATAAAGATAAGGAATTCTATCAGGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
3UTR TCA 90 bp ATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTCAAACTTaGAATACACTGTGTGTCATTCACCTGGCTAGCACTAGAAATCCA +
Preference number: 1 (lower is better)
Translates to: ITISTVRYHGFAFQT*NTLCVIHLASTRNP
Trigger: TGGATTTCTAGTGCTAGCCAGGTGAATGACACACAGTGTATTTCAAGTTTGAAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGAATTCACGCATATCACTaGAAGGCCCTCATCCATCTC +
Preference number: 2 (lower is better)
Translates to: RELGSGVHSRLLPAEISGIHAYH*KALIHL
Trigger: GAGATGGATGAGGGCCTTCCAGTGATATGCGTGAAT...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
3UTR-3UTR TCA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCTTGAGACCAGGAGTTTaGAACCAACCTGGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLALRPGV*NQPGQL
Trigger: AAGCTGGCCAGGTTGGTTTCAAACTCCTGGTCTCAA...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp GCTCTGAGCCTCGGTTGTCACAACTCCGGAAGAGACATGTTCCACCTAGTGGGAAAGCCTGTTCACTTCTaGACCCTACCCAGGGGCATA +
Preference number: 2 (lower is better)
Translates to: ALSLGCHNSGRDMFHLVGKPVHF*TLPRGI
Trigger: TATGCCCCTGGGTAGGGTCCAGAAGTGAACAGGCTT...TCCCACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAGCCTGGCTTCCCAAATaGGCATCAGTCAGGTCTTCG +
Preference number: 2 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIAWLPK*ASVRSS
Trigger: CGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGC...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 90 bp TCACTTGCCTGGCTTCCCAAATGGGCATCAGTCAGGTCTTCGCAGTaGCCAGCTTACTGCCATCTTGGTGTGACACATGCTCTCCATAAG +
Preference number: 2 (lower is better)
Translates to: SLAWLPKWASVRSSQ*PAYCHLGVTHALHK
Trigger: CTTATGGAGAGCATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGCAAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTAAGGAACATGCTTCTTaGAAGGAGTGGTGGGCTAAT +
Preference number: 2 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLKEHAS*KEWWAN
Trigger: ATTAGCCCACCACTCCTTCCAAGAAGCATGTTCCTT...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 90 bp TGGGCAGCTCTGTCACAGTGCAAGAGCCTTATAGCTGGGATGCTCTaGGACTTCAAAACCTGCTCAGACTTTGCAGATGCTCCATACAGG +
Preference number: 2 (lower is better)
Translates to: WAALSQCKSLIAGML*DFKTCSDFADAPYR
Trigger: CCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTGCACTGTGACAGAGCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp GCTCTGAGCCTCGGTTGTCACAACTCCGGAAGAGACATGTTCCACCTAGTGGGAGAAACTTTCGAGGTCTaGAAAGTCTCACTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: ALSLGCHNSGRDMFHLVGETFEV*KVSLSP
Trigger: AGGACTCAGTGAGACTTTTCAGACCTCGAAAGTTTC...TCCCACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGCCCTCAAGGAACATaGTTCTTGGAAGGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: CFPFEGCQISCLFTTAQISPQGT*FLEGVV
Trigger: CACCACTCCTTCCAAGAAGCATGTTCCTTGAGGGCT...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATATTCAGCCTGCCTTTCTaGAAGGAAGACAGTTGGCTC +
Preference number: 2 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIFSLPF*KEDSWL
Trigger: GAGCCAACTGTCTTCCTTGCAGAAAGGCAGGCTGAA...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR CCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGATTCACGCATATCACTaGAAGGCCCTCATCCATCTC +
Preference number: 2 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLIHAYH*KALIHL
Trigger: GAGATGGATGAGGGCCTTCCAGTGATATGCGTGAAT...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTAAAATTAGCTACACATaGTGGCACACACATGCGATC +
Preference number: 2 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLKISYT*WHTHAI
Trigger: GATCGCATGTGTGTGCCACCATGTGTAGCTAATTTT...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCGCCTGGCTTCCCAAATaGGCATCAGTCAGGTCTTCG +
Preference number: 2 (lower is better)
Translates to: AIREALFHSSARNSGPISAWLPK*ASVRSS
Trigger: CGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGC...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGTCAGGTCTTCGCAGTTaGCAGCTTACTGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGSGLRS*QLTAIL
Trigger: CAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGA...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCCGGTCCATTTTCACTTaGCTGGCTTCCCAAATGGGC +
Preference number: 2 (lower is better)
Translates to: AIREALFHSSARNSGPISRSIFT*LASQMG
Trigger: GCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCG...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGACTATTTCACAGCTCTaGCCGAAACTCTGGGCCTAT +
Preference number: 2 (lower is better)
Translates to: FPKASSWEGCKQGCSERRTISQL*PKLWAY
Trigger: ATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGT...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTCTAAGTCATGGTGTGTaGAGTGGCAAGAACTACTGT +
Preference number: 2 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAILSHGV*SGKNYC
Trigger: ACAGTAGTTCTTGCCACTCCACACACCATGACTTAG...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR-3UTR CCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTTGTGAAATGGCACTATaGCTTAACTCTCATCACAGT +
Preference number: 2 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLCEMAL*LNSHHS
Trigger: ACTGTGATGAGAGTTAAGCCATAGTGCCATTTCACA...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAAGATGCAACTTTTCTaGACTGCAAGGTGGACATAC +
Preference number: 2 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNKMQLF*TARWTY
Trigger: GTATGTCCACCTTGCAGTTCAGAAAAGTTGCATCTT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAGGCCTATTAGCTCAGTaGAGAGAAAACTGTGAATGC +
Preference number: 2 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIGLLAQ*RENCEC
Trigger: GCATTCACAGTTTTCTCTTCACTGAGCTAATAGGCC...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTCAGGTCTTCGCAGTTaGCAGCTTACTGCCATCTTG +
Preference number: 2 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSASGLRS*QLTAIL
Trigger: CAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGA...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTATTATGAACTCCTTCTaGACAGAGTCAAGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAIIMNSF*TESRCS
Trigger: AGAGCACCTTGACTCTGTCCAGAAGGAGTTCATAAT...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR GCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCAGCCCTCAAGGAACATaGTTCTTGGAAGGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: IWLLLEKHYFTALPETLGSPQGT*FLEGVV
Trigger: CACCACTCCTTCCAAGAAGCATGTTCCTTGAGGGCT...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGGTGGGGTTACCAGACTaGAGCAGAATCTGGTCACTT +
Preference number: 2 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEVGLPD*SRIWSL
Trigger: AAGTGACCAGATTCTGCTGCAGTCTGGTAACCCCAC...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATATTTAGCAATGCTCTGTaGTGGTTGCTGTTCATTCCT +
Preference number: 2 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIFSNAL*WLLFIP
Trigger: AGGAATGAACAGCAACCAGCACAGAGCATTGCTAAA...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAGACTGCAGCAGAATCTaGTCACTTTCTTATTCTTGC +
Preference number: 2 (lower is better)
Translates to: PFEGCQISCLFTTAQISEDCSRI*SLSYSC
Trigger: GCAAGAATAAGAAAGTGACCAGATTCTGCTGCAGTC...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp GCTCTGAGCCTCGGTTGTCACAACTCCGGAAGAGACATGTTCCACCTAGTGGGAATCCTAATGGTTCCATaGCTCTTTGGTAAGTGTAAT +
Preference number: 2 (lower is better)
Translates to: ALSLGCHNSGRDMFHLVGILMVP*LFGKCN
Trigger: ATTACACTTACCAAAGAGCCATGGAACCATTAGGAT...TCCCACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 90 bp AAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTaGAAGAGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: KCSHYYQFQVTTFTL*KRELGSGVHSRLLP
Trigger: TGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
3UTR-3UTR TCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGATTCTGACCACTTTATaGAACTTTCGAGGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLILTTL*NFRGLK
Trigger: TTTCAGACCTCGAAAGTTTCATAAAGTGGTCAGAAT...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGTCATGGTGTGTGGAGTaGCAAGAACTACTGTCAGCT +
Preference number: 2 (lower is better)
Translates to: KISQSLFLGRMQTRLQRESWCVE*QELLSA
Trigger: AGCTGACAGTAGTTCTTGCCACTCCACACACCATGA...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR-3UTR CCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAACATTTTCTAAGTCATaGTGTGTGGAGTGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: PFEGCQISCLFTTAQISETFSKS*CVEWQE
Trigger: TTCTTGCCACTCCACACACCATGACTTAGAAAATGT...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR-3UTR CCA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTCCATTTTCACTTGCCTaGCTTCCCAAATGGGCATCA +
Preference number: 2 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPPFSLA*LPKWAS
Trigger: TGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGG...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGCACTGTCAGATACCATaGTTTTGCTTTTCAAACTTG +
Preference number: 2 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLHCQIP*FCFSNL
Trigger: CAAGTTTGAAAAGCAAAACCATGGTATCTGACAGTG...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTGAAACTTTCGAGGTCTaGAAAGTCTCACTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPETFEV*KVSLSP
Trigger: AGGACTCAGTGAGACTTTTCAGACCTCGAAAGTTTC...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATTGTCCATTTGTCACTaGATAATTAGAAGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: PFEGCQISCLFTTAQISELSICH*IIRRSG
Trigger: TCCACTCCTTCTAATTATGCAGTGACAAATGGACAA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR-3UTR GCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCGTAGGGAATTCTGCCTaGCATTCTTGTAGTAAGCAC +
Preference number: 2 (lower is better)
Translates to: IWLLLEKHYFTALPETLGVGNSA*HSCSKH
Trigger: GTGCTTACTACAAGAATGGCAGGCAGAATTCCCTAC...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCCTACACATACTTGGTTaGCCCAGTGTAACCTCTTTA +
Preference number: 2 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSALHILG*PSVTSL
Trigger: TAAAGAGGTTACACTGGGGCAACCAAGTATGTGTAG...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAAAGGTGACACTGTATTaGGCTTTACTGAGAAAAGAT +
Preference number: 2 (lower is better)
Translates to: PFEGCQISCLFTTAQISEKVTLY*ALLRKD
Trigger: ATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTT...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCTCTTATGTAGAGGTTTaGACTCCAAAATCATTTCCT +
Preference number: 2 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVSYVEV*TPKSFP
Trigger: AGGAAATGATTTTGGAGTCCAAACCTCTACATAAGA...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR TCA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: AIREALFHSSARNSGPISLLLLI*FHSCLP
Trigger: AGGGAGGCATGAATGGAATCAGATTAAAAGTAACAG...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp TATATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGAAAGATGCAACTTTTCTaGACTGCAAGGTGGACATAC +
Preference number: 2 (lower is better)
Translates to: YICYSSTEALVSHSRAARKMQLF*TARWTY
Trigger: GTATGTCCACCTTGCAGTTCAGAAAAGTTGCATCTT...TCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAATAGCACAGACAAATaGTGTGGGAACTGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: EKFPKASSWEGCKQGCSENSTDK*CGNCRE
Trigger: TTCCCTACAGTTCCCACATCATTTGTCTGTGCTATT...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATACATGCAAGTAGTCCCTaGCACTCGTGGGGTTACCAG +
Preference number: 2 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIHASSP*HSWGYQ
Trigger: CTGGTAACCCCACGAGTGTCAGGGACTACTTGCATG...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAGATCACAATTCAGCCTaGCTTTCTGCAAGGAAGACA +
Preference number: 2 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCADHNSA*LSARKT
Trigger: TGTCTTCCTTGCAGAAAGGCAGGCTGAATTGTGATC...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR CCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTGTGAAATGGCACTATaGCTTAACTCTCATCACAGT +
Preference number: 2 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSACEMAL*LNSHHS
Trigger: ACTGTGATGAGAGTTAAGCCATAGTGCCATTTCACA...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCT +
Preference number: 2 (lower is better)
Translates to: IWLLLEKHYFTALPETLGLLLLI*FHSCLP
Trigger: AGGGAGGCATGAATGGAATCAGATTAAAAGTAACAG...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR TCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGCACGTCTCACTTAGGTaGATTAAACTTTGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEHVSLR*IKLCGK
Trigger: TTTGCCACAAAGTTTAATTCACCTAAGTGAGACGTG...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGTCCATTTGTCACTTGTaGGTCTTTGGTTTGTTCCAA +
Preference number: 2 (lower is better)
Translates to: EKFPKASSWEGCKQGCSESICHL*VFGLFQ
Trigger: TTGGAACAAACCAAAGACCCACAAGTGACAAATGGA...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR TCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTTTCATTAGTGAAAGGTaGCACTGTATTGGGCTTTAC +
Preference number: 2 (lower is better)
Translates to: QWWEVITISTVRYHGFAFFISER*HCIGLY
Trigger: GTAAAGCCCAATACAGTGTCACCTTTCACTAATGAA...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTCAGTTGCCAGCTTACTaGCATCTTGGTGTGACACAT +
Preference number: 2 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFQLPAY*HLGVTH
Trigger: ATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTG...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGATTTACCAGTTTCCGTaGTGTAAATGCTCCCATTAT +
Preference number: 2 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEIYQFP*CKCSHY
Trigger: ATAATGGGAGCATTTACACCACGGAAACTGGTAAAT...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 90 bp CTAAGTCATGGTGTGTGGAGTGGCAAGAACTACTGTCAGCTTTTCTaGACATATGTAATTAGAAGTTTCTGGCATGAGATTGTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: LSHGVWSGKNYCQLF*TYVIRSFWHEIVPR
Trigger: TCTTGGGACAATCTCATGCCAGAAACTTCTAATTACATATGTCAAGAAAAGCTGACAGTAGTTCTTGCCACTCCACACACCATGACTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR CAA 90 bp TTAATAGTCATCTTGTTTTCTAAAAATCACAGCTCTGAGCCTCGGTaGTCACAACTCCGGAAGAGACATGTTCCACCTAGTGGGATATTA +
Preference number: 2 (lower is better)
Translates to: LIVILFSKNHSSEPR*SQLRKRHVPPSGIL
Trigger: TAATATCCCACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGCTGTGATTTTTAGAAAACAAGATGACTATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATACCATTTTCACTTGCCTaGCTTCCCAAATGGGCATCA +
Preference number: 2 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIPFSLA*LPKWAS
Trigger: TGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGG...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR GCA 90 bp GCAAGAAGTAAGCGTTTAATTGTTGATATCCGTCATTATCAGAAACTTCAGTGTTTTGCAAAATACATGTaGCTGGGCTTCGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: ARSKRLIVDIRHYQKLQCFAKYM*LGFGLL
Trigger: CAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAA...ACACTGAAGTTTCTGATAATGACGGATATCAACAATTAAACGCTTACTTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
3UTR-3UTR CCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTTTTATCCAAGTAGCCTaGGGCATTCTGACCACTTTA +
Preference number: 2 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFFIQVA*GILTTL
Trigger: TAAAGTGGTCAGAATGCCCCAGGCTACTTGGATAAA...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATATGTGTGTCATTCACCTaGCTAGCACTAGAAATCCAT +
Preference number: 2 (lower is better)
Translates to: KRHVPPSGILTFSPSYRICVSFT*LALEIH
Trigger: ATGGATTTCTAGTGCTAGCCAGGTGAATGACACACA...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 90 bp CAAACAACAAAAGAGCTGGCTTTTAATTATGTAACAATAATATGGTaGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTG +
Preference number: 2 (lower is better)
Translates to: QTTKELAFNYVTIIW*LLEKHYFTALPETL
Trigger: CAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATATTATTGTTACATAATTAAAAGCCAGCTCTTTTGTTGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CCA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGTAATTAGAAGTTTCTaGCATGAGATTGTCCCAAGA +
Preference number: 2 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGVIRSF*HEIVPR
Trigger: TCTTGGGACAATCTCATGCCAGAAACTTCTAATTAC...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR CAA 90 bp AAACAAAAGCAATGGCTTGTTTCATTAGTGAAAGGTGACACTGTATaGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTATGGGTA +
Preference number: 2 (lower is better)
Translates to: KQKQWLVSLVKGDTV*GFTEKRYFPYTLWV
Trigger: TACCCATAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTTCACTAATGAAACAAGCCATTGCTTTTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 72 bp GCCCTACGCATCTACTCGAGGTCACTGAGGGTGTACTaGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTT +
Preference number: 3 (lower is better)
Translates to: ALRIYSRSLRVY*RWAALSQCKSL
Trigger: AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCTCGAGTAGATGCGTAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 72 bp CATTCCTGCCCTAGCAATGACCTCAGGCAAAACCAGTaGCACCATGGCAGTGGGTTAGCCATTAGCAGACGA +
Preference number: 3 (lower is better)
Translates to: HSCPSNDLRQNQ*HHGSGLAISRR
Trigger: TCGTCTGCTAATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTTCGGTCCATTTTCACTaGCCTGGCTTCCCAAATGGG +
Preference number: 3 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAISVHFH*PGFPNG
Trigger: CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGA...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACTCGGTCCATTTTCACTaGCCTGGCTTCCCAAATGGG +
Preference number: 3 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNSVHFH*PGFPNG
Trigger: CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGA...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGGATGCAAACAAGGTaGCAGCGAGAGGAGGAACCT +
Preference number: 3 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNRMQTR*QREEEP
Trigger: AGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCCT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCAGACACAAGAATCACTaGAACCCGGGAGGCAGATGT +
Preference number: 3 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVRHKNH*NPGGRC
Trigger: ACATCTGCCTCCCGGGTTCAAGTGATTCTTGTGTCT...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGGTCAGGTCTTCGCAGTaGCCAGCTTACTGCCATCTT +
Preference number: 3 (lower is better)
Translates to: FPKASSWEGCKQGCSERRVRSSQ*PAYCHL
Trigger: AAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGAC...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCTCTACACATACTTGGTaGCCCCAGTGTAACCTCTTT +
Preference number: 3 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLASTHTW*PQCNLF
Trigger: AAAGAGGTTACACTGGGGCAACCAAGTATGTGTAGA...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGACACAAGAATCACTaGAACCCGGGAGGCAGATGT +
Preference number: 3 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIRHKNH*NPGGRC
Trigger: ACATCTGCCTCCCGGGTTCAAGTGATTCTTGTGTCT...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTATAGCTGGGATGCTCTaGGACTTCAAAACCTGCTCA +
Preference number: 3 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAIIAGML*DFKTCS
Trigger: TGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTAT...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 72 bp TCCATCTTACTCTCTGAGCCTGTGCTCTCTCATCTGTaGATCCATGGTTCCCAAAAGCCCACAGAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: SILLSEPVLSHL*IHGSQKPTEVL
Trigger: AAGCACCTCTGTGGGCTTTTGGGAACCATGGATGCACAGATGAGAGAGCACAGGCTCAGAGAGTAAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 72 bp TTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATaGGCATCAGTCAGGTCTTCGCAGTTGCCAGCTTAC +
Preference number: 3 (lower is better)
Translates to: FFGPFSLAWLPK*ASVRSSQLPAY
Trigger: GTAAGCTGGCAACTGCGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 72 bp GTGGGCAGCTCTGTCACAGTGCAAGAGCCTTATAGCTaGGATGCTCTTGGACTTCAAAACCTGCTCAGACTT +
Preference number: 3 (lower is better)
Translates to: VGSSVTVQEPYS*DALGLQNLLRL
Trigger: AAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTGCACTGTGACAGAGCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR TCA 72 bp GGTCTTCGCAGTTGCCAGCTTACTGCCATCTTGGTGTaGCACATGCTCTCCATAAGTAAGGACAGGTTTAGG +
Preference number: 3 (lower is better)
Translates to: GLRSCQLTAILV*HMLSISKDRFR
Trigger: CCTAAACCTGTCCTTACTTATGGAGAGCATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTGCGAAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 72 bp AGACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTaGCTGGCTTCCCAAATGGGCATCAGTCAGGTCTTC +
Preference number: 3 (lower is better)
Translates to: RQPSLFLRSIFT*LASQMGISQVF
Trigger: GAAGACCTGACTGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 72 bp AGCCTTATAGCTGGGATGCTCTTGGACTTCAAAACCTaGTCAGACTTTGCAGATGCTCCATACAGGCAAGGG +
Preference number: 3 (lower is better)
Translates to: SLIAGMLLDFKT*SDFADAPYRQG
Trigger: CCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CCA 72 bp AAGGATGCAAACAAGGTTGCAGCGAGAGGAGGAACCTaGTTACTTAGGGAGGTGAGTCCACAGCACATAAAG +
Preference number: 3 (lower is better)
Translates to: KDANKVAARGGT*LLREVSPQHIK
Trigger: CTTTATGTGCTGTGGACTCACCTCCCTAAGTAACCAGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGTCTACACATACTTGGTaGCCCCAGTGTAACCTCTTT +
Preference number: 3 (lower is better)
Translates to: FPKASSWEGCKQGCSERRSTHTW*PQCNLF
Trigger: AAAGAGGTTACACTGGGGCAACCAAGTATGTGTAGA...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTAGGATGCAAACAAGGTaGCAGCGAGAGGAGGAACCT +
Preference number: 3 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPRMQTR*QREEEP
Trigger: AGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCCT...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGGTCACTTGTGGGTCTTaGGTTTGTTCCAAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGVTCGS*VCSKAR
Trigger: TCTAGCCTTGGAACAAACCAAAGACCCACAAGTGAC...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR CAA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATGTCCATTTGTCCATTaGTCACTTGTGGGTCTTTGG +
Preference number: 3 (lower is better)
Translates to: PFEGCQISCLFTTAQISECPFVH*SLVGLW
Trigger: CCAAAGACCCACAAGTGACAAATGGACAAATGGACA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR GCA 72 bp GCTAGCACTAGAAATCCATCTTACTCTCTGAGCCTGTaGTCTCTCATCTGTGCATCCATGGTTCCCAAAAGC +
Preference number: 3 (lower is better)
Translates to: ASTRNPSYSLSL*SLICASMVPKS
Trigger: GCTTTTGGGAACCATGGATGCACAGATGAGAGAGCACAGGCTCAGAGAGTAAGATGGATTTCTAGTGCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 72 bp GCTCTTGGACTTCAAAACCTGCTCAGACTTTGCAGATaGTCCATACAGGCAAGGGAAGCACTGGGAGAAAAA +
Preference number: 3 (lower is better)
Translates to: ALGLQNLLRLCR*SIQAREALGEK
Trigger: TTTTTCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAGGTACAGAAACAAGCTaGAAGTGCTTTTTGTGCCTT +
Preference number: 3 (lower is better)
Translates to: PFEGCQISCLFTTAQISEGTETS*KCFLCL
Trigger: AAGGCACAAAAAGCACTTCAAGCTTGTTTCTGTACC...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGATGGTTCCATGGCTCTTaGGTAAGTGTAATTACAGAA +
Preference number: 3 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRWFHGS*VSVITE
Trigger: TTCTGTAATTACACTTACCAAAGAGCCATGGAACCA...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCGAGTCCTGTGTCCATTaGTCCATTTGTCACTTGTGG +
Preference number: 3 (lower is better)
Translates to: IWLLLEKHYFTALPETLGESCVH*SICHLW
Trigger: CCACAAGTGACAAATGGACAAATGGACACAGGACTC...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR TCA 72 bp CAAATGAAGGATAGAAGTAAACATGCAAGTAGTCCCTaGCACTCGTGGGGTTACCAGACTGCAGCAGAATCT +
Preference number: 3 (lower is better)
Translates to: QMKDRSKHASSP*HSWGYQTAAES
Trigger: AGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCATGTTTACTTCTATCCTTCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGGTTTCTGGCATGAGATaGTCCCAAGAAGAAGACATG +
Preference number: 3 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVVSGMR*SQEEDM
Trigger: CATGTCTTCTTCTTGGGACAATCTCATGCCAGAAAC...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR-3UTR CAA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTAGAGTCAAGGTGCTCTaGAAGAAGACATGTCTGAGA +
Preference number: 3 (lower is better)
Translates to: QWWEVITISTVRYHGFAFRVKVL*KKTCLR
Trigger: TCTCAGACATGTCTTCTTCAAGAGCACCTTGACTCT...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR CAA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGTTGTCCATTTGTCACTaGTGGGTCTTTGGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: EKFPKASSWEGCKQGCSELSICH*WVFGLF
Trigger: GAACAAACCAAAGACCCACAAGTGACAAATGGACAA...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR-3UTR CAA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATATCCCAAAGCCTCTTCTaGGGAAGGATGCAAACAAGG +
Preference number: 3 (lower is better)
Translates to: KRHVPPSGILTFSPSYRISQSLF*GRMQTR
Trigger: CCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGA...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR TCA 72 bp CTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCTGATAGAATTCCTTAT +
Preference number: 3 (lower is better)
Translates to: LEGPHPSLLLLI*FHSCLPDRIPY
Trigger: ATAAGGAATTCTATCAGGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
3UTR-3UTR CAA 90 bp GGGGTTGCCAAAAATAGTTCTTCTGTAAAGATCTGTGTATCTGTACAGTGGAGTAAAGGTGACACTGTATaGGGCTTTACTGAGAAAAGA +
Preference number: 3 (lower is better)
Translates to: GVAKNSSSVKICVSVQWSKGDTV*GFTEKR
Trigger: TCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT...ACTCCACTGTACAGATACACAGATCTTTACAGAAGAACTATTTTTGGCAACCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR TCA 72 bp TTTGTTCTCATGTTTAAAATGCACAGTGGTGGGAGGTaGTTACAATCAGCACTGTCAGATACCATGGTTTTG +
Preference number: 3 (lower is better)
Translates to: FVLMFKMHSGGR*LQSALSDTMVL
Trigger: CAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTGTGCATTTTAAACATGAGAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR GCA 72 bp AAGATCTGTGTATCTGTACAGTGGAGTTACATCATATaGACGTCTCACTTAGGTGAATTAAACTTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: KICVSVQWSYII*TSHLGELNFVA
Trigger: TGCCACAAAGTTTAATTCACCTAAGTGAGACGTGCATATGATGTAACTCCACTGTACAGATACACAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR-3UTR CAA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTTTCTTATGTAGAGGTTaGGACTCCAAAATCATTTCC +
Preference number: 3 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFFLCRG*DSKIIS
Trigger: GGAAATGATTTTGGAGTCCAAACCTCTACATAAGAA...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR CCA 72 bp TATTCATTCACATTTTCTAAGTCATGGTGTGTGGAGTaGCAAGAACTACTGTCAGCTTTTCTTGACATATGT +
Preference number: 3 (lower is better)
Translates to: YSFTFSKSWCVE*QELLSAFLDIC
Trigger: ACATATGTCAAGAAAAGCTGACAGTAGTTCTTGCCACTCCACACACCATGACTTAGAAAATGTGAATGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397936.8
3UTR TCA 72 bp AAAGCTATGATAATAGAACATCTAGTGGTTTCTGGTTaGAACTTTCCTATCAGAAGAAGCCTAGCTACTAAT +
Preference number: 3 (lower is better)
Translates to: KAMIIEHLVVSG*NFPIRRSLATN
Trigger: ATTAGTAGCTAGGCTTCTTCTGATAGGAAAGTTTCAACCAGAAACCACTAGATGTTCTATTATCATAGCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGAGCCTGGCTTCCCAAATaGGCATCAGTCAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: RELGSGVHSRLLPAEISGAWLPK*ASVRSS
Trigger: CGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGC...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATTAACCAGGAAAGGGTaGTCCAGACCCTGCATGATC +
Preference number: 4 (lower is better)
Translates to: RELGSGVHSRLLPAEISGLTRKG*SRPCMI
Trigger: GATCATGCAGGGTCTGGAGCACCCTTTCCTGGTTAA...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTGTTGCCGGGTTTGACTaGCCTACGCATCTACTCGAG +
Preference number: 4 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLVAGFD*PTHLLE
Trigger: CTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAAC...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGAACTATTTCACAGCTCTaGCCGAAACTCTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: RELGSGVHSRLLPAEISGTISQL*PKLWAY
Trigger: ATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGT...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGAGGGTGTACTGGAGGTaGGCAGCTCTGTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLRVYWR*AALSQC
Trigger: GCACTGTGACAGAGCTGCCCACCTCCAGTACACCCT...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATCTACTCGAGGTCACTaGGGGTGTACTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: PFEGCQISCLFTTAQISESTRGH*GCTGGG
Trigger: CCCACCTCCAGTACACCCTCAGTGACCTCGAGTAGA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATAAGTTGCCGGGTTTaGCTGCCCTACGCATCTACT +
Preference number: 4 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLAISCRV*LPYAST
Trigger: AGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTAT...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCAGCCCTCAAGGAACATaGTTCTTGGAAGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLASPQGT*FLEGVV
Trigger: CACCACTCCTTCCAAGAAGCATGTTCCTTGAGGGCT...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGGTTGCCGGGTTTGACTaGCCTACGCATCTACTCGAG +
Preference number: 4 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLVAGFD*PTHLLE
Trigger: CTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAAC...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGTCACTGAGGGTGTACTaGAGGTGGGCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLSLRVY*RWAALS
Trigger: TGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGA...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp GCAGACGACTTCCTGGAATTAGGGTTGTGGCATAAGTaGCCGGGTTTGACTGCCCTACGCATCTACTCGAGG +
Preference number: 4 (lower is better)
Translates to: ADDFLELGLWHK*PGLTALRIYSR
Trigger: CCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAACCCTAATTCCAGGAAGTCGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GCTCTGAGCCTCGGTTGTCACAACTCCGGAAGAGACATGTTCCACCTAGTGGGACACTGGTGGTTTTCTTaGAGTGTTCGCTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: ALSLGCHNSGRDMFHLVGHWWFS*SVRSHG
Trigger: ACCATGGGAGCGAACACTTCAAGAAAACCACCAGTG...TCCCACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTACTGCCATCTTGGTGTaGCACATGCTCTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLTAILV*HMLSIS
Trigger: ACTTATGGAGAGCATGTGTCACACCAAGATGGCAGT...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGACATTTCTCACTTCATTaGGCTCCACGCACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: RELGSGVHSRLLPAEISGHFSLH*APRTFV
Trigger: AACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATG...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGACTACACATACTTGGTTaGCCCAGTGTAACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: RELGSGVHSRLLPAEISGLHILG*PSVTSL
Trigger: TAAAGAGGTTACACTGGGGCAACCAAGTATGTGTAG...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAAGCCTGTTCACTTCTaGACCCTACCCAGGGGCATA +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNKPVHF*TLPRGI
Trigger: TATGCCCCTGGGTAGGGTCCAGAAGTGAACAGGCTT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCCCATTTTCACTTGCCTaGCTTCCCAAATGGGCATCA +
Preference number: 4 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLAPFSLA*LPKWAS
Trigger: TGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGG...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp TGGCTTCCCAAATGGGCATCAGTCAGGTCTTCGCAGTaGCCAGCTTACTGCCATCTTGGTGTGACACATGCT +
Preference number: 4 (lower is better)
Translates to: WLPKWASVRSSQ*PAYCHLGVTHA
Trigger: AGCATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGACTGATGCCCATTTGGGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp TCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTaGCAGCGAGAGGAGGAACCTGGTTACTTAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQSLFLGRMQTR*QREEEPGYLGR
Trigger: CCTCCCTAAGTAACCAGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp CTGGGATGCTCTTGGACTTCAAAACCTGCTCAGACTTaGCAGATGCTCCATACAGGCAAGGGAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: LGCSWTSKPAQT*QMLHTGKGSTG
Trigger: CCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp TTCCTGGAATTAGGGTTGTGGCATAAGTTGCCGGGTTaGACTGCCCTACGCATCTACTCGAGGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: FLELGLWHKLPG*TALRIYSRSLR
Trigger: CCTCAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAACCCTAATTCCAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTTCATATCCCTGTGAATaGTGCGCTGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAISYPCE*CAGSAG
Trigger: ACCTGCAGAACCAGCGCATCATTCACAGGGATATGA...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACCTCCTTTTCTGGAGCTaGACATCTCAGGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNLLFWS*TSQVPC
Trigger: ACATGGCACCTGAGATGTTCAGCTCCAGAAAAGGAG...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTCTACTCGAGGTCACTaGGGGTGTACTGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHSTRGH*GCTGGG
Trigger: CCCACCTCCAGTACACCCTCAGTGACCTCGAGTAGA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCAGACCTTCCCAAAACTaGCTTTCCCAATGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVRPSQN*LSQWLA
Trigger: TGCGAGCCATTGGGAAAGGCAGTTTTGGGAAGGTCT...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGGGTGCTCCAGACCCTaGATGATCTGGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: RLLPAEISGSNADSRISLGCSRP*MIWSSL
Trigger: CAAGGAACTCCAGATCATGCAGGGTCTGGAGCACCC...CAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAAAAGCCCACAGAGGTaGTTCAGTCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNKSPQR*FSHRSS
Trigger: GCTGCTTCTGTGACTGAAGCACCTCTGTGGGCTTTT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGACTCAGGCAAAACCAGTaGCACCATGGCAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRLRQNQ*HHGSGL
Trigger: TAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAG...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACAGCGGCTGCCAGATCAGCTaGCTGTTCACAACAGCACAG +
Preference number: 4 (lower is better)
Translates to: QVTTFTLLKRELGSGVHSGCQIS*LFTTAQ
Trigger: CTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCC...GCTGTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAAGTGTTCGCTCCCATaGTTGAATCTGCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNKCSLP*LNLPRP
Trigger: AGGTCTGGGCAGATTCAACCATGGGAGCGAACACTT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTCACCTTGTGGGTCTTTaGTTTGTTCCAAGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLHLVGL*FVPRLD
Trigger: ATCTAGCCTTGGAACAAACCAAAGACCCACAAGGTG...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTCTTTCTACACATACTTaGTTGCCCCAGTGTAACCTC +
Preference number: 4 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLLSTHT*LPQCNL
Trigger: GAGGTTACACTGGGGCAACCAAGTATGTGTAGAAAG...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCAATGCTCTGTGCTaGTTGCTGTTCATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNSNALC*LLFIPA
Trigger: GGCAGGAATGAACAGCAACCAGCACAGAGCATTGCT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATACTCCTTTTCTGGAGCTaGACATCTCAGGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: CFPFEGCQISCLFTTAQILLFWS*TSQVPC
Trigger: ACATGGCACCTGAGATGTTCAGCTCCAGAAAAGGAG...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACACACATCCCCTTCTCTaGAATCGAGTCAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNTHPLL*NRVRAI
Trigger: AATTGCCCTGACTCGATTTCAGAGAAGGGGATGTGT...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCCATGCAAGTAGTCCCTaGCACTCGTGGGGTTACCAG +
Preference number: 4 (lower is better)
Translates to: AIREALFHSSARNSGPISHASSP*HSWGYQ
Trigger: CTGGTAACCCCACGAGTGTCAGGGACTACTTGCATG...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAGGGTGCTCCAGACCCTaGATGATCTGGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPGCSRP*MIWSSL
Trigger: CAAGGAACTCCAGATCATGCAGGGTCTGGAGCACCC...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGACTATTTCACAGCTCTaGCCGAAACTCTGGGCCTAT +
Preference number: 4 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLTISQL*PKLWAY
Trigger: ATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGT...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGCTCAGGCAAAACCAGTaGCACCATGGCAGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: RLLPAEISGSNADSRISLLRQNQ*HHGSGL
Trigger: TAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAG...CAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAAGTGTTCGCTCCCATaGTTGAATCTGCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIKCSLP*LNLPRP
Trigger: AGGTCTGGGCAGATTCAACCATGGGAGCGAACACTT...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCGCCTGGCTTCCCAAATaGGCATCAGTCAGGTCTTCG +
Preference number: 4 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSAAWLPK*ASVRSS
Trigger: CGAAGACCTGACTGATGCCCATTTGGGAAGCCAGGC...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACCCCAAAGCCTCTTCTTaGGAAGGATGCAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNPKASS*EGCKQG
Trigger: ACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGG...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCCCTTCATTCCTCCCATaGGGCTCGGAGCGATGCTTT +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPPSFLP*GSERCF
Trigger: AAAGCATCGCTCCGAGCCTCATGGGAGGAATGAAGG...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGCCTTCATTCCTCCCATaGGGCTCGGAGCGATGCTTT +
Preference number: 4 (lower is better)
Translates to: KISQSLFLGRMQTRLQREPSFLP*GSERCF
Trigger: AAAGCATCGCTCCGAGCCTCATGGGAGGAATGAAGG...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCGTTCGCTCCCATGGTTaGATCTGCCCAGACCTGGAT +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGVRSHG*ICPDLD
Trigger: ATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAAC...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCTCACTGTTTCTTCCTTaGAGTGGACGTTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVSLFLP*SGRSVA
Trigger: TGCAACAGAACGTCCACTTCAAGGAAGAAACAGTGA...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAGGCTTCATATCCCTGTaGATGATGCGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPGFISL*MMRWFC
Trigger: GCAGAACCAGCGCATCATTCACAGGGATATGAAGCC...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TATATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGAGTACTGGAGCGAATATaGTACGGTCTCCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: YICYSSTEALVSHSRAARVLERI*YGLRPL
Trigger: GAGAGGCCGGAGACCGTATCATATTCGCTCCAGTAC...TCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATTGATTGATGTGAAATaGCATCCCAGGAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HSRLLPAEISGSNADSRILIDVK*HPRSSG
Trigger: GCCTGAGCTCCTGGGATGTCATTTCACATCAATCAA...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR GCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTGAAAAGGCACCTATCTaGCCGGAAGCGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPEKAPI*PEAAEA
Trigger: AGCCTCCGCCGCTTCCGGGCAGATAGGTGCCTTTTC...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR GCA 90 bp CAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACAGCTTAACCAGGAAAGGGTaGTCCAGACCCTGCATGATC +
Preference number: 4 (lower is better)
Translates to: QVTTFTLLKRELGSGVHSLTRKG*SRPCMI
Trigger: GATCATGCAGGGTCTGGAGCACCCTTTCCTGGTTAA...GCTGTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATATCATGGTGTGTGGAGTaGCAAGAACTACTGTCAGCT +
Preference number: 4 (lower is better)
Translates to: CFPFEGCQISCLFTTAQISWCVE*QELLSA
Trigger: AGCTGACAGTAGTTCTTGCCACTCCACACACCATGA...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCAAGGAACATGCTTCTTaGAAGGAGTGGTGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVKEHAS*KEWWAN
Trigger: ATTAGCCCACCACTCCTTCCAAGAAGCATGTTCCTT...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAATTAGCTACACATGGTaGCACACACATGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: PFEGCQISCLFTTAQISEISYTW*HTHAIP
Trigger: TGGGATCGCATGTGTGTGCCACCATGTGTAGCTAAT...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATGCGAGAGGAGGAACCTaGTTACTTAGGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHARGGT*LLREVS
Trigger: ACTCACCTCCCTAAGTAACCAGGTTCCTCCTCTCGC...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGTCACTGAGGGTGTACTaGAGGTGGGCAGCTCTGTCA +
Preference number: 4 (lower is better)
Translates to: KISQSLFLGRMQTRLQRESLRVY*RWAALS
Trigger: TGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGA...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGCTGGAATTAGGGTTGTaGCATAAGTTGCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: FPKASSWEGCKQGCSERRLELGL*HKLPGL
Trigger: CAAACCCGGCAACTTATGCCACAACCCTAATTCCAG...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTCATATCCCTGTGAATaGTGCGCTGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHSYPCE*CAGSAG
Trigger: ACCTGCAGAACCAGCGCATCATTCACAGGGATATGA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGACTGCCATCTTGGTGTaGCACATGCTCTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGTAILV*HMLSIS
Trigger: ACTTATGGAGAGCATGTGTCACACCAAGATGGCAGT...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAATAAGTTGCCGGGTTTaGCTGCCCTACGCATCTACT +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPISCRV*LPYAST
Trigger: AGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTAT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAAGACCTTCCCAAAACTaGCTTTCCCAATGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPRPSQN*LSQWLA
Trigger: TGCGAGCCATTGGGAAAGGCAGTTTTGGGAAGGTCT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATAGACCTTCCCAAAACTaGCTTTCCCAATGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHRPSQN*LSQWLA
Trigger: TGCGAGCCATTGGGAAAGGCAGTTTTGGGAAGGTCT...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCCATTCTTCTGTACAATaGAGACCTTCCCAAAACTGC +
Preference number: 4 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVHSSVQ*RPSQNC
Trigger: GCAGTTTTGGGAAGGTCTGCATTGTACAGAAGAATG...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACCATTTCTCACTTCATTaGGCTCCACGCACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNHFSLH*APRTFV
Trigger: AACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATG...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTGGGTGCTCCAGACCCTaGATGATCTGGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QWWEVITISTVRYHGFAFGCSRP*MIWSSL
Trigger: CAAGGAACTCCAGATCATGCAGGGTCTGGAGCACCC...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTCTCAGCAGTTCATATaGCGTCACTCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGSQQFI*RHSQGP
Trigger: TGGTCCCTGGGAGTGACGGCATATGAACTGCTGAGA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAGTAGGGAATTCTGCCTaGCATTCTTGTAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: PFEGCQISCLFTTAQISEVGNSA*HSCSKH
Trigger: GTGCTTACTACAAGAATGGCAGGCAGAATTCCCTAC...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGCTCAGACTTTGCAGATaGTCCATACAGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: RLLPAEISGSNADSRISLLRLCR*SIQARE
Trigger: TTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAG...CAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACTTTAGCAATGCTCTGTaGTGGTTGCTGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNFSNAL*WLLFIP
Trigger: AGGAATGAACAGCAACCAGCACAGAGCATTGCTAAA...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACTTGAATCTCCAAGGATaGAGCAGGTACCATCTTCAT +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNLNLQG*SRYHLH
Trigger: ATGAAGATGGTACCTGCTGCATCCTTGGAGATTCAA...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAAAGTGTTCGCTCCCATaGTTGAATCTGCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPKCSLP*LNLPRP
Trigger: AGGTCTGGGCAGATTCAACCATGGGAGCGAACACTT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTATTTACCAGTTTCCGTaGTGTAAATGCTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLIYQFP*CKCSHY
Trigger: ATAATGGGAGCATTTACACCACGGAAACTGGTAAAT...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCGCGAGAGGAGGAACCTaGTTACTTAGGGAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGARGGT*LLREVS
Trigger: ACTCACCTCCCTAAGTAACCAGGTTCCTCCTCTCGC...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCTGTGTGTCATTCACCTaGCTAGCACTAGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVCVSFT*LALEIH
Trigger: ATGGATTTCTAGTGCTAGCCAGGTGAATGACACACA...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTAGGCAAGGGAAGCACTaGGAGAAAAACATTCAAGAA +
Preference number: 4 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAIRQGKH*EKNIQE
Trigger: TTCTTGAATGTTTTTCTCCCAGTGCTTCCCTTGCCT...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp CTGTCACAGTGCAAGAGCCTTATAGCTGGGATGCTCTaGGACTTCAAAACCTGCTCAGACTTTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: LSQCKSLIAGML*DFKTCSDFADA
Trigger: AGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTGCACTGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATGGACATCAGATAACTaGGAAAATCGTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSRLLPAEISGSNADSRIWTSDN*ENRWSG
Trigger: TCCAGACCAACGATTTTCTCAGTTATCTGATGTCCA...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATGGACATCAGATAACTaGGAAAATCGTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PFEGCQISCLFTTAQISEWTSDN*ENRWSG
Trigger: TCCAGACCAACGATTTTCTCAGTTATCTGATGTCCA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGAAGATGCAACTTTTCTaGACTGCAAGGTGGACATAC +
Preference number: 4 (lower is better)
Translates to: FPKASSWEGCKQGCSERRKMQLF*TARWTY
Trigger: GTATGTCCACCTTGCAGTTCAGAAAAGTTGCATCTT...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACTTCATTAGTGAAAGGTaGCACTGTATTGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNFISER*HCIGLY
Trigger: GTAAAGCCCAATACAGTGTCACCTTTCACTAATGAA...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATACATTCTTCTGTACAATaGAGACCTTCCCAAAACTGC +
Preference number: 4 (lower is better)
Translates to: HSRLLPAEISGSNADSRIHSSVQ*RPSQNC
Trigger: GCAGTTTTGGGAAGGTCTGCATTGTACAGAAGAATG...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp CAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACAGCTTGAAATCTGTGATGTaGACGTGCCCATGTTCGTCA +
Preference number: 4 (lower is better)
Translates to: QVTTFTLLKRELGSGVHSLKSVM*TCPCSS
Trigger: TGACGAACATGGGCACGTGCACATCACAGATTTCAA...GCTGTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGTCTCAGCAGTTCATATaGCGTCACTCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVSQQFI*RHSQGP
Trigger: TGGTCCCTGGGAGTGACGGCATATGAACTGCTGAGA...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCACAGTTGCCAGCTTACTaGCATCTTGGTGTGACACAT +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPQLPAY*HLGVTH
Trigger: ATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTG...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTCAGGTCTTCGCAGTTaGCAGCTTACTGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGSGLRS*QLTAIL
Trigger: CAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGGGATGCAAACAAGGTTaGAGCGAGAGGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVGCKQG*SERRNL
Trigger: CAGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCC...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGGTTGCTGTTCATTCCTaGCCTAGCAATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEVAVHS*PSNDLR
Trigger: CCTGAGGTCATTGCTAGGGCAGGAATGAACAGCAAC...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCCCGAAGCCTTAGTTaGATATCTAGTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: HSRLLPAEISGSNADSRISRSLS*ISSLDS
Trigger: AGAATCGAGACTAGATATCCAACTAAGGCTTCGGGA...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATATTCACGCATATCACTaGAAGGCCCTCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHIHAYH*KALIHL
Trigger: GAGATGGATGAGGGCCTTCCAGTGATATGCGTGAAT...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGAAGCCTGTTCACTTCTaGACCCTACCCAGGGGCATA +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVKPVHF*TLPRGI
Trigger: TATGCCCCTGGGTAGGGTCCAGAAGTGAACAGGCTT...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ATGCAAGTAGTCCCTGACACTCGTGGGGTTACCAGACTGCAGCAGAATCTGGTCTGTGAAATGGCACTATaGCTTAACTCTCATCACAGT +
Preference number: 4 (lower is better)
Translates to: MQVVPDTRGVTRLQQNLVCEMAL*LNSHHS
Trigger: ACTGTGATGAGAGTTAAGCCATAGTGCCATTTCACA...GACCAGATTCTGCTGCAGTCTGGTAACCCCACGAGTGTCAGGGACTACTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTTGTATACGTGTGAAATaGCACTATGGCTTAACTCTC +
Preference number: 4 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAICIRVK*HYGLTL
Trigger: GAGAGTTAAGCCATAGTGCCATTTCACACGTATACA...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTCCTTCATTCCTCCCATaGGGCTCGGAGCGATGCTTT +
Preference number: 4 (lower is better)
Translates to: SVIIRNFSVVLQNTCAWAPSFLP*GSERCF
Trigger: AAAGCATCGCTCCGAGCCTCATGGGAGGAATGAAGG...AGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR TCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTCACTGTTTCTTCCTTaGAGTGGACGTTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHSLFLP*SGRSVA
Trigger: TGCAACAGAACGTCCACTTCAAGGAAGAAACAGTGA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCGGCTTCATATCCCTGTaGATGATGCGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: YQKLQCSFAKYMCLGFGLGFISL*MMRWFC
Trigger: GCAGAACCAGCGCATCATTCACAGGGATATGAAGCC...GAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR TCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTGGCTTCATATCCCTGTaGATGATGCGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPGFISL*MMRWFC
Trigger: GCAGAACCAGCGCATCATTCACAGGGATATGAAGCC...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGCCCAAGAAGAAGACATaGGGCCTTTACAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGPKKKT*GLYKLL
Trigger: TAACAACTTGTAAAGGCCTCATGTCTTCTTCTTGGG...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR TCA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACTGTATTGGGCTTTACTaGGAAAAGATACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNCIGLY*EKILPI
Trigger: TATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACA...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCATTGAGACCAGGAGTTTaGAACCAACCTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCALRPGV*NQPGQL
Trigger: AAGCTGGCCAGGTTGGTTTCAAACTCCTGGTCTCAA...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAATGGGCTTCGGTCTCCTaGAACTCCAATTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKWASVS*NSNSVG
Trigger: TCCCACTGAATTGGAGTTTCAGGAGACCGAAGCCCA...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGTTAACCAGGAAAGGGTaGTCCAGACCCTGCATGATC +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVLTRKG*SRPCMI
Trigger: GATCATGCAGGGTCTGGAGCACCCTTTCCTGGTTAA...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCATCTGTGATGTGCACGTaGCCATGTTCGTCAAGTAAA +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPSVMCT*PCSSSK
Trigger: TTTACTTGACGAACATGGGCACGTGCACATCACAGA...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATCACTTTCTTATTCTTaGTCTTTCCAACACATCCCC +
Preference number: 4 (lower is better)
Translates to: PFEGCQISCLFTTAQISESLSYS*SFQHIP
Trigger: GGGGATGTGTTGGAAAGAGCAAGAATAAGAAAGTGA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAGTGGGGTTACCAGACTaGAGCAGAATCTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAVGLPD*SRIWSL
Trigger: AAGTGACCAGATTCTGCTGCAGTCTGGTAACCCCAC...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGAAAAGCCCACAGAGGTaGTTCAGTCACAGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVKSPQR*FSHRSS
Trigger: GCTGCTTCTGTGACTGAAGCACCTCTGTGGGCTTTT...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGTTCTCATGTTTAAAATaGACAGTGGTGGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FPKASSWEGCKQGCSERRFSCLK*TVVGGD
Trigger: ATCACCTCCCACCACTGTGCATTTTAAACATGAGAA...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCCTCAGACTTTGCAGATaGTCCATACAGGCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPLRLCR*SIQARE
Trigger: TTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAG...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GGGGTTGCCAAAAATAGTTCTTCTGTAAAGATCTGTGTATCTGTACAGTGGAGTGGCTGCCAGATCAGCTaGCTGTTCACAACAGCACAG +
Preference number: 4 (lower is better)
Translates to: GVAKNSSSVKICVSVQWSGCQIS*LFTTAQ
Trigger: CTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCC...ACTCCACTGTACAGATACACAGATCTTTACAGAAGAACTATTTTTGGCAACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTTTCAGCCTGCCTTTCTaGAAGGAAGACAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QWWEVITISTVRYHGFAFFSLPF*KEDSWL
Trigger: GAGCCAACTGTCTTCCTTGCAGAAAGGCAGGCTGAA...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGGAATCTGCCCAGACCTaGATCCTCGATTTATACTAT +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGESAQT*ILDLYY
Trigger: ATAGTATAAATCGAGGATCCAGGTCTGGGCAGATTC...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTCTGAGCCTCGGTTGTCACAACTCCGGAAGAGACATGTTCCACCTAGTGGGACGCAAAATTTCAAAGTaGTCAAAGTTGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: ALSLGCHNSGRDMFHLVGRKISK*SKLTSS
Trigger: TGAAGATGTCAACTTTGACCACTTTGAAATTTTGCG...TCCCACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CCA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAAACTGCCTTTCCCAATaGCTCGCAAAATTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PFEGCQISCLFTTAQISENCLSQ*LAKFQS
Trigger: ACTTTGAAATTTTGCGAGCCATTGGGAAAGGCAGTT...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGAGACCCTGCATGATCTaGAGTTCCTTGAAGACATTT +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGRPCMI*SSLKTF
Trigger: AAATGTCTTCAAGGAACTCCAGATCATGCAGGGTCT...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGAAAATTAGCTACACATaGTGGCACACACATGCGATC +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGKISYT*WHTHAI
Trigger: GATCGCATGTGTGTGCCACCATGTGTAGCTAATTTT...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTAGCAATGCTCTGTGCTaGTTGCTGTTCATTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QWWEVITISTVRYHGFAFSNALC*LLFIPA
Trigger: GGCAGGAATGAACAGCAACCAGCACAGAGCATTGCT...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCACTGGTGGTTTTCTTaGAGTGTTCGCTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPHWWFS*SVRSHG
Trigger: ACCATGGGAGCGAACACTTCAAGAAAACCACCAGTG...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCACTGGTGGTTTTCTTaGAGTGTTCGCTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: YQKLQCSFAKYMCLGFGLHWWFS*SVRSHG
Trigger: ACCATGGGAGCGAACACTTCAAGAAAACCACCAGTG...GAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR TCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTTCATATCCCTGTGAATaGTGCGCTGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPSYPCE*CAGSAG
Trigger: ACCTGCAGAACCAGCGCATCATTCACAGGGATATGA...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCTCATATCCCTGTGAATaGTGCGCTGGTTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: YQKLQCSFAKYMCLGFGLSYPCE*CAGSAG
Trigger: ACCTGCAGAACCAGCGCATCATTCACAGGGATATGA...GAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR TCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCTCCTTTTCTGGAGCTaGACATCTCAGGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPLLFWS*TSQVPC
Trigger: ACATGGCACCTGAGATGTTCAGCTCCAGAAAAGGAG...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCATGGACATCAGATAACTaGGAAAATCGTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPWTSDN*ENRWSG
Trigger: TCCAGACCAACGATTTTCTCAGTTATCTGATGTCCA...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACGAAACTTTCGAGGTCTaGAAAGTCTCACTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FQVTTFTLLKRELGSGVHETFEV*KVSLSP
Trigger: AGGACTCAGTGAGACTTTTCAGACCTCGAAAGTTTC...GTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGAATTCTGACCACTTTATaGAACTTTCGAGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRILTTL*NFRGLK
Trigger: TTTCAGACCTCGAAAGTTTCATAAAGTGGTCAGAAT...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATAAGATGCAACTTTTCTaGACTGCAAGGTGGACATAC +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHKMQLF*TARWTY
Trigger: GTATGTCCACCTTGCAGTTCAGAAAAGTTGCATCTT...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGATGTATTGGGCTTTACTaGGAAAAGATACTTCCCATA +
Preference number: 4 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRCIGLY*EKILPI
Trigger: TATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACA...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTTTGAGACCAGGAGTTTaGAACCAACCTGGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPLRPGV*NQPGQL
Trigger: AAGCTGGCCAGGTTGGTTTCAAACTCCTGGTCTCAA...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCACATTCTTCTGTACAATaGAGACCTTCCCAAAACTGC +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPHSSVQ*RPSQNC
Trigger: GCAGTTTTGGGAAGGTCTGCATTGTACAGAAGAATG...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCTTAACCAGGAAAGGGTaGTCCAGACCCTGCATGATC +
Preference number: 4 (lower is better)
Translates to: YQKLQCSFAKYMCLGFGLLTRKG*SRPCMI
Trigger: GATCATGCAGGGTCTGGAGCACCCTTTCCTGGTTAA...GAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTTGAAATCTGTGATGTaGACGTGCCCATGTTCGTCA +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGLKSVM*TCPCSS
Trigger: TGACGAACATGGGCACGTGCACATCACAGATTTCAA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTAGCCCTCAAGGAACATaGTTCTTGGAAGGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPSPQGT*FLEGVV
Trigger: CACCACTCCTTCCAAGAAGCATGTTCCTTGAGGGCT...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGTAGGGAATTCTGCCTaGCATTCTTGTAGTAAGCAC +
Preference number: 4 (lower is better)
Translates to: KISQSLFLGRMQTRLQREVGNSA*HSCSKH
Trigger: GTGCTTACTACAAGAATGGCAGGCAGAATTCCCTAC...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCCGGTCCATTTTCACTTaGCTGGCTTCCCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: HITGRPSSISVTFNLIPFRSIFT*LASQMG
Trigger: GCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCG...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGACAGTCTAGCCTAGAATaGCATGATGACATTTTGAAT +
Preference number: 4 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRQSSLE*HDDILN
Trigger: ATTCAAAATGTCATCATGGCATTCTAGGCTAGACTG...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTCCCGAAGCCTTAGTTaGATATCTAGTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHSRSLS*ISSLDS
Trigger: AGAATCGAGACTAGATATCCAACTAAGGCTTCGGGA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAATTATGAACTCCTTCTaGACAGAGTCAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPIMNSF*TESRCS
Trigger: AGAGCACCTTGACTCTGTCCAGAAGGAGTTCATAAT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGCTAAGTCATGGTGTGTaGAGTGGCAAGAACTACTGT +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSELSHGV*SGKNYC
Trigger: ACAGTAGTTCTTGCCACTCCACACACCATGACTTAG...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTTTATCCAAGTAGCCTaGGGCATTCTGACCACTTTA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHFIQVA*GILTTL
Trigger: TAAAGTGGTCAGAATGCCCCAGGCTACTTGGATAAA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCCTTTCTACACATACTTaGTTGCCCCAGTGTAACCTC +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPLSTHT*LPQCNL
Trigger: GAGGTTACACTGGGGCAACCAAGTATGTGTAGAAAG...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATGACTGCAGCAGAATCTaGTCACTTTCTTATTCTTGC +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHDCSRI*SLSYSC
Trigger: GCAAGAATAAGAAAGTGACCAGATTCTGCTGCAGTC...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATAGGCAAGGGAAGCACTaGGAGAAAAACATTCAAGAA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHRQGKH*EKNIQE
Trigger: TTCTTGAATGTTTTTCTCCCAGTGCTTCCCTTGCCT...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTCAAGAGCCTTATAGCTaGGATGCTCTTGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPQEPYS*DALGLQ
Trigger: TTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTG...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATAAGGGTGTACTGGAGGTaGGCAGCTCTGTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIRVYWR*AALSQC
Trigger: GCACTGTGACAGAGCTGCCCACCTCCAGTACACCCT...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTCACTTGTGGGTCTTTaGTTTGTTCCAAGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSASLVGL*FVPRLD
Trigger: ATCTAGCCTTGGAACAAACCAAAGACCCACAAGTGA...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR CAA 72 bp CGAGGTCTGAAAAGTCTCACTGAGTCCTGTGTCCATTaGTCCATTTGTCACTTGTGGGTCTTTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: RGLKSLTESCVH*SICHLWVFGLF
Trigger: GAACAAACCAAAGACCCACAAGTGACAAATGGACAAATGGACACAGGACTCAGTGAGACTTTTCAGACCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR TCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATACCTTCATTCCTCCCATaGGGCTCGGAGCGATGCTTT +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIPSFLP*GSERCF
Trigger: AAAGCATCGCTCCGAGCCTCATGGGAGGAATGAAGG...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCACACGTCTCACTTAGGTaGATTAAACTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPHVSLR*IKLCGK
Trigger: TTTGCCACAAAGTTTAATTCACCTAAGTGAGACGTG...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCACGTCTCACTTAGGTaGATTAAACTTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHHVSLR*IKLCGK
Trigger: TTTGCCACAAAGTTTAATTCACCTAAGTGAGACGTG...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTGGCCTATTAGCTCAGTaGAGAGAAAACTGTGAATGC +
Preference number: 4 (lower is better)
Translates to: QWWEVITISTVRYHGFAFGLLAQ*RENCEC
Trigger: GCATTCACAGTTTTCTCTTCACTGAGCTAATAGGCC...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TATATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGAAATAGCACAGACAAATaGTGTGGGAACTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: YICYSSTEALVSHSRAARNSTDK*CGNCRE
Trigger: TTCCCTACAGTTCCCACATCATTTGTCTGTGCTATT...TCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACAGCCAGCACATAAAGGCTTaGATCAAAACAAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: QVTTFTLLKRELGSGVHSQHIKA*IKTNEG
Trigger: TCCTTCATTTGTTTTGATTCAAGCCTTTATGTGCTG...GCTGTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCCATTTCTCACTTCATTaGGCTCCACGCACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPHFSLH*APRTFV
Trigger: AACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATG...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGTTGTCCATTTGTCACTaGATAATTAGAAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGLSICH*IIRRSG
Trigger: TCCACTCCTTCTAATTATGCAGTGACAAATGGACAA...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR GCA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGTTTCCGTGGTGTAAATaGTCCCATTATTACCAATTT +
Preference number: 4 (lower is better)
Translates to: FPKASSWEGCKQGCSERRFPWCK*SHYYQF
Trigger: AAATTGGTAATAATGGGAGCATTTACACCACGGAAA...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGATTTCCGTGGTGTAAATaGTCCCATTATTACCAATTT +
Preference number: 4 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRFPWCK*SHYYQF
Trigger: AAATTGGTAATAATGGGAGCATTTACACCACGGAAA...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGTTGGACTTCAAAACCTaGTCAGACTTTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KISQSLFLGRMQTRLQRELDFKT*SDFADA
Trigger: AGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAA...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCTTTAGCAATGCTCTGTaGTGGTTGCTGTTCATTCCT +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPFSNAL*WLLFIP
Trigger: AGGAATGAACAGCAACCAGCACAGAGCATTGCTAAA...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAATTTGCAAAATACATGTaGCTGGGCTTCGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKFAKYM*LGFGLL
Trigger: CAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAA...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTGATCACAATTCAGCCTaGCTTTCTGCAAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: QWWEVITISTVRYHGFAFDHNSA*LSARKT
Trigger: TGTCTTCCTTGCAGAAAGGCAGGCTGAATTGTGATC...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCAACTGCCTTTCCCAATaGCTCGCAAAATTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: AIREALFHSSARNSGPISNCLSQ*LAKFQS
Trigger: ACTTTGAAATTTTGCGAGCCATTGGGAAAGGCAGTT...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATATCTTATGTAGAGGTTTaGACTCCAAAATCATTTCCT +
Preference number: 4 (lower is better)
Translates to: CFPFEGCQISCLFTTAQISYVEV*TPKSFP
Trigger: AGGAAATGATTTTGGAGTCCAAACCTCTACATAAGA...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCTTATGTAGAGGTTTaGACTCCAAAATCATTTCCT +
Preference number: 4 (lower is better)
Translates to: HSRLLPAEISGSNADSRISYVEV*TPKSFP
Trigger: AGGAAATGATTTTGGAGTCCAAACCTCTACATAAGA...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCACATTTTCTAAGTCATaGTGTGTGGAGTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSATFSKS*CVEWQE
Trigger: TTCTTGCCACTCCACACACCATGACTTAGAAAATGT...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAAAGGAACATGCTTCTTaGAAGGAGTGGTGGGCTAAT +
Preference number: 4 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAKEHAS*KEWWAN
Trigger: ATTAGCCCACCACTCCTTCCAAGAAGCATGTTCCTT...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGAAGGTGACACTGTATTaGGCTTTACTGAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: RLLPAEISGSNADSRISLKVTLY*ALLRKD
Trigger: ATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTT...CAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTAAAATTAGCTACACATaGTGGCACACACATGCGATC +
Preference number: 4 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPKISYT*WHTHAI
Trigger: GATCGCATGTGTGTGCCACCATGTGTAGCTAATTTT...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCATTTTCACTTGCCTaGCTTCCCAAATGGGCATCA +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPPFSLA*LPKWAS
Trigger: TGATGCCCATTTGGGAAGCCAGGCAAGTGAAAATGG...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TATATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGAGACTGCAGCAGAATCTaGTCACTTTCTTATTCTTGC +
Preference number: 4 (lower is better)
Translates to: YICYSSTEALVSHSRAARDCSRI*SLSYSC
Trigger: GCAAGAATAAGAAAGTGACCAGATTCTGCTGCAGTC...TCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGCACTGTCAGATACCATaGTTTTGCTTTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGHCQIP*FCFSNL
Trigger: CAAGTTTGAAAAGCAAAACCATGGTATCTGACAGTG...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTCCATTTGTCACTTGTaGGTCTTTGGTTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHSICHL*VFGLFQ
Trigger: TTGGAACAAACCAAAGACCCACAAGTGACAAATGGA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTGCAAGGAAGACAGTTaGCTCAATCCTCAGATTACT +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGCKEDS*LNPQIT
Trigger: AGTAATCTGAGGATTGAGCCAACTGTCTTCCTTGCA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
3UTR CAA 72 bp ATCTTGTTTTCTAAAAATCACAGCTCTGAGCCTCGGTaGTCACAACTCCGGAAGAGACATGTTCCACCTAGT +
Preference number: 4 (lower is better)
Translates to: ILFSKNHSSEPR*SQLRKRHVPPS
Trigger: ACTAGGTGGAACATGTCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGCTGTGATTTTTAGAAAACAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAATCACTGTTTCTTCCTTaGAGTGGACGTTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKSLFLP*SGRSVA
Trigger: TGCAACAGAACGTCCACTTCAAGGAAGAAACAGTGA...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR TCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTAGTACTGGAGCGAATATaGTACGGTCTCCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLVLERI*YGLRPL
Trigger: GAGAGGCCGGAGACCGTATCATATTCGCTCCAGTAC...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGGTACTGGAGCGAATATaGTACGGTCTCCGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLVLERI*YGLRPL
Trigger: GAGAGGCCGGAGACCGTATCATATTCGCTCCAGTAC...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAATTCTGACCACTTTATaGAACTTTCGAGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPILTTL*NFRGLK
Trigger: TTTCAGACCTCGAAAGTTTCATAAAGTGGTCAGAAT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPLLLLI*FHSCLP
Trigger: AGGGAGGCATGAATGGAATCAGATTAAAAGTAACAG...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: KISQSLFLGRMQTRLQRELLLLI*FHSCLP
Trigger: AGGGAGGCATGAATGGAATCAGATTAAAAGTAACAG...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCAAAGTGGTCAAAGTTaGAGTGATTTCTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPQSGQS*SDFSTA
Trigger: GGCAGTGGAGAAATCACTTCAACTTTGACCACTTTG...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR GCA 90 bp GCAAGAAGTAAGCGTTTAATTGTTGATATCCGTCATTATCAGAAACTTCAGTGTGGGTGCTCCAGACCCTaGATGATCTGGAGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARSKRLIVDIRHYQKLQCGCSRP*MIWSSL
Trigger: CAAGGAACTCCAGATCATGCAGGGTCTGGAGCACCC...ACACTGAAGTTTCTGATAATGACGGATATCAACAATTAAACGCTTACTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTTCTGTGATGTGCACGTaGCCATGTTCGTCAAGTAAA +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPSVMCT*PCSSSK
Trigger: TTTACTTGACGAACATGGGCACGTGCACATCACAGA...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGATCTCAGCAGTTCATATaGCGTCACTCCCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGSQQFI*RHSQGP
Trigger: TGGTCCCTGGGAGTGACGGCATATGAACTGCTGAGA...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR GCA 90 bp GGGGTTGCCAAAAATAGTTCTTCTGTAAAGATCTGTGTATCTGTACAGTGGAGTCAGTTGCCAGCTTACTaGCATCTTGGTGTGACACAT +
Preference number: 4 (lower is better)
Translates to: GVAKNSSSVKICVSVQWSQLPAY*HLGVTH
Trigger: ATGTGTCACACCAAGATGGCAGTAAGCTGGCAACTG...ACTCCACTGTACAGATACACAGATCTTTACAGAAGAACTATTTTTGGCAACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTTCAGGTCTTCGCAGTTaGCAGCTTACTGCCATCTTG +
Preference number: 4 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFSGLRS*QLTAIL
Trigger: CAAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGA...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATAGGATGCAAACAAGGTTaGAGCGAGAGGAGGAACCTG +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIGCKQG*SERRNL
Trigger: CAGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCC...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGAGACCCTGCATGATCTaGAGTTCCTTGAAGACATTT +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVRPCMI*SSLKTF
Trigger: AAATGTCTTCAAGGAACTCCAGATCATGCAGGGTCT...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGATTATGAACTCCTTCTaGACAGAGTCAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVIMNSF*TESRCS
Trigger: AGAGCACCTTGACTCTGTCCAGAAGGAGTTCATAAT...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAATTATGAACTCCTTCTaGACAGAGTCAAGGTGCTCT +
Preference number: 4 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAIMNSF*TESRCS
Trigger: AGAGCACCTTGACTCTGTCCAGAAGGAGTTCATAAT...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATTCACGCATATCACTaGAAGGCCCTCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: HITGRPSSISVTFNLIPFIHAYH*KALIHL
Trigger: GAGATGGATGAGGGCCTTCCAGTGATATGCGTGAAT...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCATTTACCAGTTTCCGTaGTGTAAATGCTCCCATTAT +
Preference number: 4 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSAIYQFP*CKCSHY
Trigger: ATAATGGGAGCATTTACACCACGGAAACTGGTAAAT...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GGGGTTGCCAAAAATAGTTCTTCTGTAAAGATCTGTGTATCTGTACAGTGGAGTCCCAAAGCCTCTTCTTaGGAAGGATGCAAACAAGGT +
Preference number: 4 (lower is better)
Translates to: GVAKNSSSVKICVSVQWSPKASS*EGCKQG
Trigger: ACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGG...ACTCCACTGTACAGATACACAGATCTTTACAGAAGAACTATTTTTGGCAACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCATCCTAATGGTTCCATaGCTCTTTGGTAAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: EVLQSQKQLTGNKTRDSAILMVP*LFGKCN
Trigger: ATTACACTTACCAAAGAGCCATGGAACCATTAGGAT...GGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGTGTGAAATGGCACTATaGCTTAACTCTCATCACAGT +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSECEMAL*LNSHHS
Trigger: ACTGTGATGAGAGTTAAGCCATAGTGCCATTTCACA...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTTGTGTGTCATTCACCTaGCTAGCACTAGAAATCCAT +
Preference number: 4 (lower is better)
Translates to: QWWEVITISTVRYHGFAFCVSFT*LALEIH
Trigger: ATGGATTTCTAGTGCTAGCCAGGTGAATGACACACA...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCCTGGAATTAGGGTTGTaGCATAAGTTGCCGGGTTTG +
Preference number: 4 (lower is better)
Translates to: HITGRPSSISVTFNLIPFLELGL*HKLPGL
Trigger: CAAACCCGGCAACTTATGCCACAACCCTAATTCCAG...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCACAAGCAGCAACACTaGTCCCTACTAGCTACATTA +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPHKQQH*SLLATL
Trigger: TAATGTAGCTAGTAGGGACCAGTGTTGCTGCTTGTG...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGTCACTTGTGGGTCTTTaGTTTGTTCCAAGGCTAGAT +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVSLVGL*FVPRLD
Trigger: ATCTAGCCTTGGAACAAACCAAAGACCCACAAGTGA...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTCCATTTGTCACTTGTaGGTCTTTGGTTTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: IWLLLEKHYFTALPETLGSICHL*VFGLFQ
Trigger: TTGGAACAAACCAAAGACCCACAAGTGACAAATGGA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR TCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGGGCTTCATATCCCTGTaGATGATGCGCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLGFISL*MMRWFC
Trigger: GCAGAACCAGCGCATCATTCACAGGGATATGAAGCC...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCGAAACTTTCGAGGTCTaGAAAGTCTCACTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: HITGRPSSISVTFNLIPFETFEV*KVSLSP
Trigger: AGGACTCAGTGAGACTTTTCAGACCTCGAAAGTTTC...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTTTTTCATTCTGCTTTTaGAGAGCTAAAGCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPFSFCF*RAKALA
Trigger: TGCTAAGGCTTTAGCTCTTCAAAAGCAGAATGAAAA...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCATTTCTCACTTCATTaGGCTCCACGCACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: YQKLQCSFAKYMCLGFGLHFSLH*APRTFV
Trigger: AACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATG...GAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGCGGTCCATTTTCACTTaGCTGGCTTCCCAAATGGGC +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLRSIFT*LASQMG
Trigger: GCCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCG...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGTCGAGTCAGGGCAATTaGTTCAAGTTTATAGTGTTT +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSESSQGN*FKFIVF
Trigger: AAACACTATAAACTTGAAGCAATTGCCCTGACTCGA...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAATCCCGAAGCCTTAGTTaGATATCTAGTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKSRSLS*ISSLDS
Trigger: AGAATCGAGACTAGATATCCAACTAAGGCTTCGGGA...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCGCAAAATTTCAAAGTaGTCAAAGTTGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHRKISK*SKLTSS
Trigger: TGAAGATGTCAACTTTGACCACTTTGAAATTTTGCG...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000398523.3
CDS-3UTR CCA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGAACTGCCTTTCCCAATaGCTCGCAAAATTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVNCLSQ*LAKFQS
Trigger: ACTTTGAAATTTTGCGAGCCATTGGGAAAGGCAGTT...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCATTGCGTACATCTTCTTaGTATCATTCTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: EISGSNADSRISLEGPHPLRTSS*YHSSVQ
Trigger: TTGTACAGAAGAATGATACCAAGAAGATGTACGCAA...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTTGCGTACATCTTCTTaGTATCATTCTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: AEISGSNADSRISLEGPHLRTSS*YHSSVQ
Trigger: TTGTACAGAAGAATGATACCAAGAAGATGTACGCAA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAAAGACCCTGCATGATCTaGAGTTCCTTGAAGACATTT +
Preference number: 4 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKRPCMI*SSLKTF
Trigger: AAATGTCTTCAAGGAACTCCAGATCATGCAGGGTCT...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp TATATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGAAAGGTGACACTGTATTaGGCTTTACTGAGAAAAGAT +
Preference number: 4 (lower is better)
Translates to: YICYSSTEALVSHSRAARKVTLY*ALLRKD
Trigger: ATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTT...TCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGATCCTAATGGTTCCATaGCTCTTTGGTAAGTGTAAT +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEILMVP*LFGKCN
Trigger: ATTACACTTACCAAAGAGCCATGGAACCATTAGGAT...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGCACTGTCAGATACCATaGTTTTGCTTTTCAAACTTG +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEHCQIP*FCFSNL
Trigger: CAAGTTTGAAAAGCAAAACCATGGTATCTGACAGTG...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTACACTGGTGGTTTTCTTaGAGTGTTCGCTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLHWWFS*SVRSHG
Trigger: ACCATGGGAGCGAACACTTCAAGAAAACCACCAGTG...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTTACAAGTTGTTATTCTaGCCATCCTCACCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFYKLLF*PSSPCG
Trigger: CCCACAAGGTGAGGATGGTCAGAATAACAACTTGTA...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR TCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAATTCTGACCACTTTATaGAACTTTCGAGGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAILTTL*NFRGLK
Trigger: TTTCAGACCTCGAAAGTTTCATAAAGTGGTCAGAAT...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TTTCCGTGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACAACACATCCCCTTCTCTaGAATCGAGTCAGGGCAATT +
Preference number: 4 (lower is better)
Translates to: FPWCKCSHYYQFQVTTFTTHPLL*NRVRAI
Trigger: AATTGCCCTGACTCGATTTCAGAGAAGGGGATGTGT...TGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCACGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GCAAGAAGTAAGCGTTTAATTGTTGATATCCGTCATTATCAGAAACTTCAGTGTAGACCTTCCCAAAACTaGCTTTCCCAATGGCTCGCA +
Preference number: 4 (lower is better)
Translates to: ARSKRLIVDIRHYQKLQCRPSQN*LSQWLA
Trigger: TGCGAGCCATTGGGAAAGGCAGTTTTGGGAAGGTCT...ACACTGAAGTTTCTGATAATGACGGATATCAACAATTAAACGCTTACTTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp TCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTCATTCTTCTGTACAATaGAGACCTTCCCAAAACTGC +
Preference number: 4 (lower is better)
Translates to: SVIIRNFSVVLQNTCAWAHSSVQ*RPSQNC
Trigger: GCAGTTTTGGGAAGGTCTGCATTGTACAGAAGAATG...AGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR GCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTAGTGGGGTTACCAGACTaGAGCAGAATCTGGTCACTT +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLVGLPD*SRIWSL
Trigger: AAGTGACCAGATTCTGCTGCAGTCTGGTAACCCCAC...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTAGTTGCTGTTCATTCCTaGCCTAGCAATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLVAVHS*PSNDLR
Trigger: CCTGAGGTCATTGCTAGGGCAGGAATGAACAGCAAC...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp GCAAGAAGTAAGCGTTTAATTGTTGATATCCGTCATTATCAGAAACTTCAGTGTAAGTGTTCGCTCCCATaGTTGAATCTGCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: ARSKRLIVDIRHYQKLQCKCSLP*LNLPRP
Trigger: AGGTCTGGGCAGATTCAACCATGGGAGCGAACACTT...ACACTGAAGTTTCTGATAATGACGGATATCAACAATTAAACGCTTACTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp CAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAACTCCAATTGCGTACATCTTCTTaGTATCATTCTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: QCSFAKYMCLGFGLLKLQLRTSS*YHSSVQ
Trigger: TTGTACAGAAGAATGATACCAAGAAGATGTACGCAA...TTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCATGTCTTCCTCATCTTaGAAGGAATACCACAAATTA +
Preference number: 4 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPMSSSS*KEYHKL
Trigger: TAATTTGTGGTATTCCTTCCAAGATGAGGAAGACAT...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp CAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAACTCCAAATGTCTTCCTCATCTTaGAAGGAATACCACAAATTA +
Preference number: 4 (lower is better)
Translates to: QCSFAKYMCLGFGLLKLQMSSSS*KEYHKL
Trigger: TAATTTGTGGTATTCCTTCCAAGATGAGGAAGACAT...TTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGTCTTATGTAGAGGTTTaGACTCCAAAATCATTTCCT +
Preference number: 4 (lower is better)
Translates to: EKFPKASSWEGCKQGCSESYVEV*TPKSFP
Trigger: AGGAAATGATTTTGGAGTCCAAACCTCTACATAAGA...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAGTAATTAGAAGTTTCTaGCATGAGATTGTCCCAAGA +
Preference number: 4 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAVIRSF*HEIVPR
Trigger: TCTTGGGACAATCTCATGCCAGAAACTTCTAATTAC...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CCA 90 bp TTTCCGTGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACAATTCACGCATATCACTaGAAGGCCCTCATCCATCTC +
Preference number: 4 (lower is better)
Translates to: FPWCKCSHYYQFQVTTFTIHAYH*KALIHL
Trigger: GAGATGGATGAGGGCCTTCCAGTGATATGCGTGAAT...TGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCACGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATAGAAACTTTCGAGGTCTaGAAAGTCTCACTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIETFEV*KVSLSP
Trigger: AGGACTCAGTGAGACTTTTCAGACCTCGAAAGTTTC...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATATCTGTGATGTGCACGTaGCCATGTTCGTCAAGTAAA +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRISVMCT*PCSSSK
Trigger: TTTACTTGACGAACATGGGCACGTGCACATCACAGA...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTTCGAGTCAGGGCAATTaGTTCAAGTTTATAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPSSQGN*FKFIVF
Trigger: AAACACTATAAACTTGAAGCAATTGCCCTGACTCGA...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp GGGGTTGCCAAAAATAGTTCTTCTGTAAAGATCTGTGTATCTGTACAGTGGAGTTTCTCATGTTTAAAATaGACAGTGGTGGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GVAKNSSSVKICVSVQWSFSCLK*TVVGGD
Trigger: ATCACCTCCCACCACTGTGCATTTTAAACATGAGAA...ACTCCACTGTACAGATACACAGATCTTTACAGAAGAACTATTTTTGGCAACCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTAACTGCCTTTCCCAATaGCTCGCAAAATTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SVIIRNFSVVLQNTCAWANCLSQ*LAKFQS
Trigger: ACTTTGAAATTTTGCGAGCCATTGGGAAAGGCAGTT...AGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTAGACCCTGCATGATCTaGAGTTCCTTGAAGACATTT +
Preference number: 4 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFRPCMI*SSLKTF
Trigger: AAATGTCTTCAAGGAACTCCAGATCATGCAGGGTCT...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGATTAGCTACACATGGTaGCACACACATGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLISYTW*HTHAIP
Trigger: TGGGATCGCATGTGTGTGCCACCATGTGTAGCTAAT...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATACAAGAGCCTTATAGCTaGGATGCTCTTGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIQEPYS*DALGLQ
Trigger: TTGAAGTCCAAGAGCATCCCAGCTATAAGGCTCTTG...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATACACAAGCAGCAACACTaGTCCCTACTAGCTACATTA +
Preference number: 4 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIHKQQH*SLLATL
Trigger: TAATGTAGCTAGTAGGGACCAGTGTTGCTGCTTGTG...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTATCACTGTTTCTTCCTTaGAGTGGACGTTCTGTTGCA +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLSLFLP*SGRSVA
Trigger: TGCAACAGAACGTCCACTTCAAGGAAGAAACAGTGA...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTCTGTTACTTTTAATCTaGTTCCATTCATGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFLLLLI*FHSCLP
Trigger: AGGGAGGCATGAATGGAATCAGATTAAAAGTAACAG...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTTTCATTAGTGAAAGGTaGCACTGTATTGGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFFISER*HCIGLY
Trigger: GTAAAGCCCAATACAGTGTCACCTTTCACTAATGAA...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAAATAGCACAGACAAATaGTGTGGGAACTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGNSTDK*CGNCRE
Trigger: TTCCCTACAGTTCCCACATCATTTGTCTGTGCTATT...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR TCA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCCAGCACATAAAGGCTTaGATCAAAACAAATGAAGGA +
Preference number: 4 (lower is better)
Translates to: HITGRPSSISVTFNLIPFQHIKA*IKTNEG
Trigger: TCCTTCATTTGTTTTGATTCAAGCCTTTATGTGCTG...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTATTGAAATCTGTGATGTaGACGTGCCCATGTTCGTCA +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLLKSVM*TCPCSS
Trigger: TGACGAACATGGGCACGTGCACATCACAGATTTCAA...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGATTGGACTTCAAAACCTaGTCAGACTTTGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGLDFKT*SDFADA
Trigger: AGCATCTGCAAAGTCTGAGCAGGTTTTGAAGTCCAA...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAACGCAAAATTTCAAAGTaGTCAAAGTTGACATCTTCA +
Preference number: 4 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKRKISK*SKLTSS
Trigger: TGAAGATGTCAACTTTGACCACTTTGAAATTTTGCG...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CCA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTATGTCTTCCTCATCTTaGAAGGAATACCACAAATTA +
Preference number: 4 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPMSSSS*KEYHKL
Trigger: TAATTTGTGGTATTCCTTCCAAGATGAGGAAGACAT...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp TTTCCGTGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTTATCCAAGTAGCCTaGGGCATTCTGACCACTTTA +
Preference number: 4 (lower is better)
Translates to: FPWCKCSHYYQFQVTTFTFIQVA*GILTTL
Trigger: TAAAGTGGTCAGAATGCCCCAGGCTACTTGGATAAA...TGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCACGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR GCA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTACTACACATACTTGGTTaGCCCAGTGTAACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLLHILG*PSVTSL
Trigger: TAAAGAGGTTACACTGGGGCAACCAAGTATGTGTAG...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGTCCCGAAGCCTTAGTTaGATATCTAGTCTCGATTCT +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLSRSLS*ISSLDS
Trigger: AGAATCGAGACTAGATATCCAACTAAGGCTTCGGGA...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGTCTTCCTCATCTTaGAAGGAATACCACAAATTA +
Preference number: 4 (lower is better)
Translates to: HITGRPSSISVTFNLIPFMSSSS*KEYHKL
Trigger: TAATTTGTGGTATTCCTTCCAAGATGAGGAAGACAT...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGTTTATCCAAGTAGCCTaGGGCATTCTGACCACTTTA +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLFIQVA*GILTTL
Trigger: TAAAGTGGTCAGAATGCCCCAGGCTACTTGGATAAA...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR TCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGTTTTCATTCTGCTTTTaGAGAGCTAAAGCCTTAGCA +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLFSFCF*RAKALA
Trigger: TGCTAAGGCTTTAGCTCTTCAAAAGCAGAATGAAAA...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
3UTR CAA 72 bp AAAGAGCTGGCTTTTAATTATGTAACAATAATATGGTaGCTATTAGAGAAGCACTATTTCACAGCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: KELAFNYVTIIW*LLEKHYFTALP
Trigger: GGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATATTATTGTTACATAATTAAAAGCCAGCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CCA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGTTGCGTACATCTTCTTaGTATCATTCTTCTGTACAA +
Preference number: 4 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLLRTSS*YHSSVQ
Trigger: TTGTACAGAAGAATGATACCAAGAAGATGTACGCAA...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS GCA 90 bp CGGAAGCGGCGGAGGCTGCGAGCGCCGGGCTGGGCTGGGCTGGGCTaGGCTGGACTGAGCTGGGCTGGGCTGGGGAGGCACCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RKRRRLRAPGWAGLG*AGLSWAGLGRHLRL
Trigger: CAGCCGCAGGTGCCTCCCCAGCCCAGCCCAGCTCAGTCCAGCGCAGCCCAGCCCAGCCCAGCCCGGCGCTCGCAGCCTCCGCCGCTTCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp AGCGCCGGGCTGGGCTGGGCTGGGCTGCGCTGGACTGAGCTGGGCTaGGCTGGGGAGGCACCTGCGGCTGCCAAGGGGTCCGAGCGCCGC +
Preference number: 5 (lower is better)
Translates to: SAGLGWAGLRWTELG*AGEAPAAAKGSERR
Trigger: GCGGCGCTCGGACCCCTTGGCAGCCGCAGGTGCCTCCCCAGCCCAGCCCAGCTCAGTCCAGCGCAGCCCAGCCCAGCCCAGCCCGGCGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp CTGCGAGCGCCGGGCTGGGCTGGGCTGGGCTGCGCTGGACTGAGCTaGGCTGGGCTGGGGAGGCACCTGCGGCTGCCAAGGGGTCCGAGC +
Preference number: 5 (lower is better)
Translates to: LRAPGWAGLGCAGLS*AGLGRHLRLPRGPS
Trigger: GCTCGGACCCCTTGGCAGCCGCAGGTGCCTCCCCAGCCCAGCCCAGCTCAGTCCAGCGCAGCCCAGCCCAGCCCAGCCCGGCGCTCGCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp CCTATCTGCCCGGAAGCGGCGGAGGCTGCGAGCGCCGGGCTGGGCTaGGCTGGGCTGCGCTGGACTGAGCTGGGCTGGGCTGGGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PICPEAAEAASAGLG*AGLRWTELGWAGEA
Trigger: TGCCTCCCCAGCCCAGCCCAGCTCAGTCCAGCGCAGCCCAGCCCAGCCCAGCCCGGCGCTCGCAGCCTCCGCCGCTTCCGGGCAGATAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp AGGCACCTATCTGCCCGGAAGCGGCGGAGGCTGCGAGCGCCGGGCTaGGCTGGGCTGGGCTGCGCTGGACTGAGCTGGGCTGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RHLSARKRRRLRAPG*AGLGCAGLSWAGLG
Trigger: CCCCAGCCCAGCCCAGCTCAGTCCAGCGCAGCCCAGCCCAGCCCAGCCCGGCGCTCGCAGCCTCCGCCGCTTCCGGGCAGATAGGTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS-3UTR CAA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGAAGGATGCAAACAAGGTaGCAGCGAGAGGAGGAACCT +
Preference number: 5 (lower is better)
Translates to: RELGSGVHSRLLPAEISGRMQTR*QREEEP
Trigger: AGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCCT...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCGAAGTGGACGTTCTGTaGCAGGTGATAACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLAEVDVL*QVITQV
Trigger: GACCTGCGTTATCACCTGCAACAGAACGTCCACTTC...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTCTGACCATCCTCACCTaGTGGGTCTTTGGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLLTILT*WVFGLF
Trigger: GAACAAACCAAAGACCCACAAGGTGAGGATGGTCAG...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CAA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCTCCCAAAGCCTCTTCTaGGGAAGGATGCAAACAAGG +
Preference number: 5 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLASQSLF*GRMQTR
Trigger: CCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGA...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATGTCCATTTGTCCATTaGTCACTTGTGGGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: RELGSGVHSRLLPAEISGCPFVH*SLVGLW
Trigger: CCAAAGACCCACAAGTGACAAATGGACAAATGGACA...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp TTGTGGCATAAGTTGCCGGGTTTGACTGCCCTACGCATCTACTCGAGGTCACTGCATAAGTTGCCGGGTTaGACTGCCCTACGCATCTAC +
Preference number: 5 (lower is better)
Translates to: LWHKLPGLTALRIYSRSLHKLPG*TALRIY
Trigger: GTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATG...CAGTGACCTCGAGTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATGCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGTCACTGAGGGTGTACTGGAGGTGGGCAGCTCTGTCACAGTGCAAGAGCCTTGTCACTTGTGGGTCTTaGGTTTGTTCCAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: RSLRVYWRWAALSQCKSLVTCGS*VCSKAR
Trigger: TCTAGCCTTGGAACAAACCAAAGACCCACAAGTGAC...AAGGCTCTTGCACTGTGACAGAGCTGCCCACCTCCAGTACACCCTCAGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CAA 90 bp CAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACAGCTGTTCGCTCCCATGGTaGAATCTGCCCAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: QVTTFTLLKRELGSGVHSCSLPW*NLPRPG
Trigger: TCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACA...GCTGTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGACATGTCTTCCTCATCTaGGAAGGAATACCACAAATT +
Preference number: 5 (lower is better)
Translates to: RELGSGVHSRLLPAEISGHVFLI*EGIPQI
Trigger: AATTTGTGGTATTCCTTCCAAGATGAGGAAGACATG...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp TGCCCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCAGAGTCAAGGTGCTCTaGAAGAAGACATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: CPSNDLRQNQCHHGSGLARVKVL*KKTCLR
Trigger: TCTCAGACATGTCTTCTTCAAGAGCACCTTGACTCT...GGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGGAGCTGGGAAGTGGTGTGCACAGCAGGCTCCTGCCAGCTGAGATAAGCGGAAAAGGTGACACTGTATaGGGCTTTACTGAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: RELGSGVHSRLLPAEISGKGDTV*GFTEKR
Trigger: TCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT...TCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTGCACACCACTTCCCAGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGAGGTTCAGCCTACAGAGATaGTATCGGGTTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: FPKASSWEGCKQGCSERRFSLQR*YRVPIP
Trigger: TGGGATGGGAACCCGATACAATCTCTGTAGGCTGAA...CCTCCTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAAGCTCTGAGCCTCGGTaGTCACAACTCCGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPSSEPR*SQLRKR
Trigger: TCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGCT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATAAAACCTGCTCAGACTTaGCAGATGCTCCATACAGGC +
Preference number: 5 (lower is better)
Translates to: HSRLLPAEISGSNADSRIKPAQT*QMLHTG
Trigger: GCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CACAGCAGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATTCCTGGAATTAGGGTaGTGGCATAAGTTGCCGGGT +
Preference number: 5 (lower is better)
Translates to: HSRLLPAEISGSNADSRIFLELG*WHKLPG
Trigger: ACCCGGCAACTTATGCCACAACCCTAATTCCAGGAA...TATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAATGCTCTGTGCTGGTaGCTGTTCATTCCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: CFPFEGCQISCLFTTAQINALCW*LFIPAL
Trigger: TAGGGCAGGAATGAACAGCAACCAGCACAGAGCATT...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACGAGTCCTGTGTCCATTaGTCCATTTGTCACTTGTGG +
Preference number: 5 (lower is better)
Translates to: QKHLFPIRGLPDQLPVHNESCVH*SICHLW
Trigger: CCACAAGTGACAAATGGACAAATGGACACAGGACTC...GTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS TCA 90 bp CATGGGGATACCCATGACCCTGAGTTTGGTGGGGACCTGCTTACCTaGGAAGAATCGCATTTCCTCATATCCTTCTCCTTCTTTGCCAGA +
Preference number: 5 (lower is better)
Translates to: HGDTHDPEFGGDLLT*EESHFLISFSFFAR
Trigger: TCTGGCAAAGAAGGAGAAGGATATGAGGAAATGCGATTCTTCTCAGGTAAGCAGGTCCCCACCAAACTCAGGGTCATGGGTATCCCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp GGTTTTCTTGAAGTGTTCGCTCCCATGGTTGAATCTGCCCAGACCTaGATCCTCGATTTATACTATCCGGGCAGAAACACCCATCTTCGC +
Preference number: 5 (lower is better)
Translates to: GFLEVFAPMVESAQT*ILDLYYPGRNTHLR
Trigger: GCGAAGATGGGTGTTTCTGCCCGGATAGTATAAATCGAGGATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACACTTCAAGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000503975.1
ENST00000626951.2
ENST00000648628.1
CDS-3UTR CAA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTGTTCGCTCCCATGGTaGAATCTGCCCAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: IWLLLEKHYFTALPETLGCSLPW*NLPRPG
Trigger: TCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAGAAGTGGACGTTCTGTaGCAGGTGATAACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPEVDVL*QVITQV
Trigger: GACCTGCGTTATCACCTGCAACAGAACGTCCACTTC...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTTCTACACATACTTGGTaGCCCCAGTGTAACCTCTTT +
Preference number: 5 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAISTHTW*PQCNLF
Trigger: AAAGAGGTTACACTGGGGCAACCAAGTATGTGTAGA...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGAGCTCTGAGCCTCGGTaGTCACAACTCCGGAAGAGA +
Preference number: 5 (lower is better)
Translates to: KISQSLFLGRMQTRLQRESSEPR*SQLRKR
Trigger: TCTCTTCCGGAGTTGTGACAACCGAGGCTCAGAGCT...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCACATAAGTTGCCGGGTTaGACTGCCCTACGCATCTAC +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPHKLPG*TALRIY
Trigger: GTAGATGCGTAGGGCAGTCAAACCCGGCAACTTATG...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTGGGTTGTGGCATAAGTaGCCGGGTTTGACTGCCCTA +
Preference number: 5 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPGLWHK*PGLTAL
Trigger: TAGGGCAGTCAAACCCGGCAACTTATGCCACAACCC...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AAACCTGCTCAGACTTTGCAGATGCTCCATACAGGCAAGGGAAGCACTGGGAGACTGCAAGGAAGACAGTaGGCTCAATCCTCAGATTAC +
Preference number: 5 (lower is better)
Translates to: KPAQTLQMLHTGKGSTGRLQGRQ*AQSSDY
Trigger: GTAATCTGAGGATTGAGCCAACTGTCTTCCTTGCAG...TCTCCCAGTGCTTCCCTTGCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CAA 90 bp CAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAACTCCAAGAAGTGGACGTTCTGTaGCAGGTGATAACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: QCSFAKYMCLGFGLLKLQEVDVL*QVITQV
Trigger: GACCTGCGTTATCACCTGCAACAGAACGTCCACTTC...TTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATTCACTGTTTCTTCCTaGAAGTGGACGTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: PFEGCQISCLFTTAQISEFTVSS*KWTFCC
Trigger: GCAACAGAACGTCCACTTCAAGGAAGAAACAGTGAA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAAGAGTCAAGGTGCTCTaGAAGAAGACATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: PFEGCQISCLFTTAQISERVKVL*KKTCLR
Trigger: TCTCAGACATGTCTTCTTCAAGAGCACCTTGACTCT...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGGTCAGGTCTTCGCAGTaGCCAGCTTACTGCCATCTT +
Preference number: 5 (lower is better)
Translates to: KISQSLFLGRMQTRLQREVRSSQ*PAYCHL
Trigger: AAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGAC...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAGGGTTGTGGCATAAGTaGCCGGGTTTGACTGCCCTA +
Preference number: 5 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAGLWHK*PGLTAL
Trigger: TAGGGCAGTCAAACCCGGCAACTTATGCCACAACCC...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAAATGCTCTGTGCTGGTaGCTGTTCATTCCTGCCCTA +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPNALCW*LFIPAL
Trigger: TAGGGCAGGAATGAACAGCAACCAGCACAGAGCATT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS GCA 90 bp AAATTCTGCTTGTGGCAAAGAACAGACATCATCTCTAGGGTTGGCTaGTCCCAGAAACTCCTCAAAGCAGGAGTGAGGTCCAAAACAACC +
Preference number: 5 (lower is better)
Translates to: KFCLWQRTDIISRVG*SQKLLKAGVRSKTT
Trigger: GGTTGTTTTGGACCTCACTCCTGCTTTGAGGAGTTTCTGGGAGCAGCCAACCCTAGAGATGATGTCTGTTCTTTGCCACAAGCAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS-3UTR CAA 90 bp AGGCTCCTGCCAGCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGACATTTCTCACTTCATaGCGCTCCACGCACTTTTGT +
Preference number: 5 (lower is better)
Translates to: RLLPAEISGSNADSRISLTFLTS*RSTHFC
Trigger: ACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATGT...CAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGCTGGCAGGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAGAAGTGGACGTTCTGTaGCAGGTGATAACGCAGGTC +
Preference number: 5 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAEVDVL*QVITQV
Trigger: GACCTGCGTTATCACCTGCAACAGAACGTCCACTTC...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTCACCTTGTGGGTCTTaGGTTTGTTCCAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: AEISGSNADSRISLEGPHSPCGS*VCSKAR
Trigger: TCTAGCCTTGGAACAAACCAAAGACCCACAAGGTGA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CAA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATACCACTTTCACATTGTaGAAGAGGGAGCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: AEISGSNADSRISLEGPHTTFTL*KRELGS
Trigger: ACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGT...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp CCTAGCAATGACCTCAGGCAAAACCAGTGCCACCATGGCAGTGGGTTAGCCATTAAAGGTGACACTGTATaGGGCTTTACTGAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: PSNDLRQNQCHHGSGLAIKGDTV*GFTEKR
Trigger: TCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT...AATGGCTAACCCACTGCCATGGTGGCACTGGTTTTGCCTGAGGTCATTGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAGTCACTTTCTTATTCTaGCTCTTTCCAACACATCCC +
Preference number: 5 (lower is better)
Translates to: CFPFEGCQISCLFTTAQIVTFLF*LFPTHP
Trigger: GGGATGTGTTGGAAAGAGCAAGAATAAGAAAGTGAC...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ATATGGTTGCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCTCCCAAAGCCTCTTCTaGGGAAGGATGCAAACAAGG +
Preference number: 5 (lower is better)
Translates to: IWLLLEKHYFTALPETLGSQSLF*GRMQTR
Trigger: CCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGA...GCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGCAACCATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTAAACCTGCTCAGACTTaGCAGATGCTCCATACAGGC +
Preference number: 5 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPKPAQT*QMLHTG
Trigger: GCCTGTATGGAGCATCTGCAAAGTCTGAGCAGGTTT...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGGCTCAACAGAAGCACTaGTTTCCCATTCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVAQQKH*FPIRGL
Trigger: CAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGC...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATGAGTCCTGTGTCCATTaGTCCATTTGTCACTTGTGG +
Preference number: 5 (lower is better)
Translates to: AEISGSNADSRISLEGPHESCVH*SICHLW
Trigger: CCACAAGTGACAAATGGACAAATGGACACAGGACTC...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS GCA 90 bp CCTAGCTATGAGCCTACAAAGTCCTCAGACTCACTCATGCAGCTTTaGCTTTTTCCTTCAAGGCCCTACAGACCATGCTTATGCTTAACT +
Preference number: 5 (lower is better)
Translates to: PSYEPTKSSDSLMQL*LFPSRPYRPCLCLT
Trigger: AGTTAAGCATAAGCATGGTCTGTAGGGCCTTGAAGGAAAAAGGCAAAGCTGCATGAGTGAGTCTGAGGACTTTGTAGGCTCATAGCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503975.1
CDS CCA 90 bp AAGCCTACAAGTAAAATGTTGCTGCTAGGATCCTCAGAGGAGCTCTaGTCTGCCCTTTTAGAAACCCGGCTGATCTACTTCTCCTATTTC +
Preference number: 5 (lower is better)
Translates to: KPTSKMLLLGSSEEL*SALLETRLIYFSYF
Trigger: GAAATAGGAGAAGTAGATCAGCCGGGTTTCTAAAAGGGCAGACCAGAGCTCCTCTGAGGATCCTAGCAGCAACATTTTACTTGTAGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAACATTTCTCACTTCATaGCGCTCCACGCACTTTTGT +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPTFLTS*RSTHFC
Trigger: ACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATGT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAAATGATCTGGAGTTCCTaGAAGACATTTCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: PFEGCQISCLFTTAQISEMIWSS*KTFLTS
Trigger: TGAAGTGAGAAATGTCTTCAAGGAACTCCAGATCAT...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCATTCAGCCTACAGAGATaGTATCGGGTTCCCATCCCA +
Preference number: 5 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAFSLQR*YRVPIP
Trigger: TGGGATGGGAACCCGATACAATCTCTGTAGGCTGAA...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TATATATGCTACAGCTCAACAGAAGCACTTGTTTCCCATTCGAGGGCTGCCAGAATAGCTGGGATGCTCTaGGACTTCAAAACCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YICYSSTEALVSHSRAARIAGML*DFKTCS
Trigger: TGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTAT...TCTGGCAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGCTGTAGCATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGATAGCTGGGATGCTCTaGGACTTCAAAACCTGCTCA +
Preference number: 5 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEIAGML*DFKTCS
Trigger: TGAGCAGGTTTTGAAGTCCAAGAGCATCCCAGCTAT...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TGTTTCCCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATATCTAGTGGTTTCTGGTaGAAACTTTCCTATCAGAAG +
Preference number: 5 (lower is better)
Translates to: CFPFEGCQISCLFTTAQISSGFW*KLSYQK
Trigger: CTTCTGATAGGAAAGTTTCAACCAGAAACCACTAGA...TATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGGGAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATTGTCCATTTGTCCATTaGTCACTTGTGGGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: AEISGSNADSRISLEGPHCPFVH*SLVGLW
Trigger: CCAAAGACCCACAAGTGACAAATGGACAAATGGACA...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS GCA 90 bp CCTGTGAACAGACACTCTTCTGTGAGGCTTGATATCATAAAATTCTaGTTGTGGCAAAGAACAGACATCATCTCTAGGGTTGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PVNRHSSVRLDIIKF*LWQRTDIISRVGCS
Trigger: GGAGCAGCCAACCCTAGAGATGATGTCTGTTCTTTGCCACAAGCAGAATTTTATGATATCAAGCCTCACAGAAGAGTGTCTGTTCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp CATTTTCATCAAACACTGGTGGTTTTCTTGAAGTGTTCGCTCCCATaGTTGAATCTGCCCAGACCTGGATCCTCGATTTATACTATCCGG +
Preference number: 5 (lower is better)
Translates to: HFHQTLVVFLKCSLP*LNLPRPGSSIYTIR
Trigger: CCGGATAGTATAAATCGAGGATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACACTTCAAGAAAACCACCAGTGTTTGATGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000503975.1
ENST00000626951.2
ENST00000648628.1
CDS-3UTR CAA 90 bp AAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGAGACATTTCTCACTTCATaGCGCTCCACGCACTTTTGT +
Preference number: 5 (lower is better)
Translates to: KISQSLFLGRMQTRLQRETFLTS*RSTHFC
Trigger: ACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATGT...CTCTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTTTCACTGTTTCTTCCTaGAAGTGGACGTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPFTVSS*KWTFCC
Trigger: GCAACAGAACGTCCACTTCAAGGAAGAAACAGTGAA...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGAGCATCGCAGCAATGTaGAAATCTGTGATGTGCACG +
Preference number: 5 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVSIAAM*KSVMCT
Trigger: CGTGCACATCACAGATTTCAACATTGCTGCGATGCT...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp CCATTCGAGGGCTGCCAGATCAGCTGCCTGTTCACAACAGCACAGATAAGTGAATTCTTATGTAGAGGTTaGGACTCCAAAATCATTTCC +
Preference number: 5 (lower is better)
Translates to: PFEGCQISCLFTTAQISEFLCRG*DSKIIS
Trigger: GGAAATGATTTTGGAGTCCAAACCTCTACATAAGAA...TTCACTTATCTGTGCTGTTGTGAACAGGCAGCTGATCTGGCAGCCCTCGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAAAAATTTCCCAAAGCCTCTTCTTGGGAAGGATGCAAACAAGGTTGCAGCGAGGTTTCTGGCATGAGATaGTCCCAAGAAGAAGACATG +
Preference number: 5 (lower is better)
Translates to: EKFPKASSWEGCKQGCSEVSGMR*SQEEDM
Trigger: CATGTCTTCTTCTTGGGACAATCTCATGCCAGAAAC...CTCGCTGCAACCTTGTTTGCATCCTTCCCAAGAAGAGGCTTTGGGAAATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CAA 90 bp TTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCACTCTACACATACTTGGTaGCCCCAGTGTAACCTCTTT +
Preference number: 5 (lower is better)
Translates to: FQVTTFTLLKRELGSGVHSTHTW*PQCNLF
Trigger: AAAGAGGTTACACTGGGGCAACCAAGTATGTGTAGA...GTGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGTGGTTCCATGGCTCTTaGGTAAGTGTAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGWFHGS*VSVITE
Trigger: TTCTGTAATTACACTTACCAAAGAGCCATGGAACCA...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGAGCTTGAAGTGCTTTTaGTGCCTTTTCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGSLKCF*CLFILL
Trigger: AAGCAGAATGAAAAGGCACAAAAAGCACTTCAAGCT...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAGGTACAGAAACAAGCTaGAAGTGCTTTTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPGTETS*KCFLCL
Trigger: AAGGCACAAAAAGCACTTCAAGCTTGTTTCTGTACC...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGGTCACTTGTGGGTCTTaGGTTTGTTCCAAGGCTAGA +
Preference number: 5 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVVTCGS*VCSKAR
Trigger: TCTAGCCTTGGAACAAACCAAAGACCCACAAGTGAC...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp ACAGCCATCTCTGTTTCTTCGGTCCATTTTCACTTGCCTGGCTTCCCAAATGGGATTGCGTACATCTTCTaGGTATCATTCTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: TAISVSSVHFHLPGFPNGIAYIF*VSFFCT
Trigger: TGTACAGAAGAATGATACCAAGAAGATGTACGCAAT...CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGAAGAAACAGAGATGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAACTCCAAGCGCTCCACGCACTTTaGTTTATTCATGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: QCSFAKYMCLGFGLLKLQALHAL*FIHVLH
Trigger: ATGAAGTACATGAATAAACAAAAGTGCGTGGAGCGC...TTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp GCTGAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATATGATCTGGAGTTCCTaGAAGACATTTCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: AEISGSNADSRISLEGPHMIWSS*KTFLTS
Trigger: TGAAGTGAGAAATGTCTTCAAGGAACTCCAGATCAT...ATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCCATGTCTTCCTCATCTaGGAAGGAATACCACAAATT +
Preference number: 5 (lower is better)
Translates to: AIREALFHSSARNSGPISHVFLI*EGIPQI
Trigger: AATTTGTGGTATTCCTTCCAAGATGAGGAAGACATG...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGTTCACTGTTTCTTCCTaGAAGTGGACGTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: QFQVTTFTLLKRELGSGVFTVSS*KWTFCC
Trigger: GCAACAGAACGTCCACTTCAAGGAAGAAACAGTGAA...CACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTAGCATCGCAGCAATGTaGAAATCTGTGATGTGCACG +
Preference number: 5 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPSIAAM*KSVMCT
Trigger: CGTGCACATCACAGATTTCAACATTGCTGCGATGCT...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp TATGTAGACAATACAGGGACAACTGGGTACAGAAACAAGCTTGAAGTGCTTTTTTCGGTCCATTTTCACTaGCCTGGCTTCCCAAATGGG +
Preference number: 5 (lower is better)
Translates to: YVDNTGTTGYRNKLEVLFSVHFH*PGFPNG
Trigger: CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGA...AAAAAGCACTTCAAGCTTGTTTCTGTACCCAGTTGTCCCTGTATTGTCTACATA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp GCTATTAGAGAAGCACTATTTCACAGCTCTGCCCGAAACTCTGGGCCTATTAGCTGGTTCCATGGCTCTTaGGTAAGTGTAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: AIREALFHSSARNSGPISWFHGS*VSVITE
Trigger: TTCTGTAATTACACTTACCAAAGAGCCATGGAACCA...GCTAATAGGCCCAGAGTTTCGGGCAGAGCTGTGAAATAGTGCTTCTCTAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS GCA 90 bp ATCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTaGCTGGGCTTCGGTCTCCTGAAACTCCAATTCAGTGGGACTTGT +
Preference number: 5 (lower is better)
Translates to: IRHYQKLQCSFAKYM*LGFGLLKLQFSGTC
Trigger: ACAAGTCCCACTGAATTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS CCA 90 bp AACAGACACTCTTCTGTGAGGCTTGATATCATAAAATTCTGCTTGTaGCAAAGAACAGACATCATCTCTAGGGTTGGCTGCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: NRHSSVRLDIIKFCL*QRTDIISRVGCSQK
Trigger: TTTCTGGGAGCAGCCAACCCTAGAGATGATGTCTGTTCTTTGCCACAAGCAGAATTTTATGATATCAAGCCTCACAGAAGAGTGTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CCA 90 bp AAACTGAAGCTTAACCCAAGGTCACAGGCTAGTAAATGGAAGAAATaGGCTCTGAACCAAGGCCTCTCTCATTCAAAAACTCAGACTCTA +
Preference number: 5 (lower is better)
Translates to: KLKLNPRSQASKWKK*ALNQGLSHSKTQTL
Trigger: TAGAGTCTGAGTTTTTGAATGAGAGAGGCCTTGGTTCAGAGCCCATTTCTTCCATTTACTAGCCTGTGACCTTGGGTTAAGCTTCAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503384.1
CDS-3UTR CAA 90 bp GCAAGAAGTAAGCGTTTAATTGTTGATATCCGTCATTATCAGAAACTTCAGTGTTGTTCGCTCCCATGGTaGAATCTGCCCAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: ARSKRLIVDIRHYQKLQCCSLPW*NLPRPG
Trigger: TCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACA...ACACTGAAGTTTCTGATAATGACGGATATCAACAATTAAACGCTTACTTCTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp GAGATAAGCGGATCTAATGCTGATTCACGCATATCACTGGAAGGCCCTCATCCAATTGCGTACATCTTCTaGGTATCATTCTTCTGTACA +
Preference number: 5 (lower is better)
Translates to: EISGSNADSRISLEGPHPIAYIF*VSFFCT
Trigger: TGTACAGAAGAATGATACCAAGAAGATGTACGCAAT...TGGATGAGGGCCTTCCAGTGATATGCGTGAATCAGCATTAGATCCGCTTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp ATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAGCTGGGAAGTGGTGTGCAGCGCTCCACGCACTTTaGTTTATTCATGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: ISSYHFHIVEEGAGKWCAALHAL*FIHVLH
Trigger: ATGAAGTACATGAATAAACAAAAGTGCGTGGAGCGC...TGCACACCACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp GGGGTTGCCAAAAATAGTTCTTCTGTAAAGATCTGTGTATCTGTACAGTGGAGTACCACTTTCACATTGTaGAAGAGGGAGCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: GVAKNSSSVKICVSVQWSTTFTL*KRELGS
Trigger: ACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGT...ACTCCACTGTACAGATACACAGATCTTTACAGAAGAACTATTTTTGGCAACCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATATCGGTCCATTTTCACTaGCCTGGCTTCCCAAATGGG +
Preference number: 5 (lower is better)
Translates to: KRHVPPSGILTFSPSYRISVHFH*PGFPNG
Trigger: CCCATTTGGGAAGCCAGGCAAGTGAAAATGGACCGA...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTGTCACTTTCTTATTCTaGCTCTTTCCAACACATCCC +
Preference number: 5 (lower is better)
Translates to: QWWEVITISTVRYHGFAFVTFLF*LFPTHP
Trigger: GGGATGTGTTGGAAAGAGCAAGAATAAGAAAGTGAC...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AGGTGCTTCAGTCACAGAAGCAGCTCACTGGAAATAAAACTAGGGATTCAGCCTAGCTTGAAGTGCTTTTaGTGCCTTTTCATTCTGCTT +
Preference number: 5 (lower is better)
Translates to: RCFSHRSSSLEIKLGIQPSLKCF*CLFILL
Trigger: AAGCAGAATGAAAAGGCACAAAAAGCACTTCAAGCT...AGGCTGAATCCCTAGTTTTATTTCCAGTGAGCTGCTTCTGTGACTGAAGCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TTTCCGTGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACAGCTCAACAGAAGCACTaGTTTCCCATTCGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FPWCKCSHYYQFQVTTFTAQQKH*FPIRGL
Trigger: CAGCCCTCGAATGGGAAACAAGTGCTTCTGTTGAGC...TGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCACGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CAGTGGTGGGAGGTGATTACAATCAGCACTGTCAGATACCATGGTTTTGCTTTTTTGTCCATTTGTCACTaGTGGGTCTTTGGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: QWWEVITISTVRYHGFAFLSICH*WVFGLF
Trigger: GAACAAACCAAAGACCCACAAGTGACAAATGGACAA...AAAAGCAAAACCATGGTATCTGACAGTGCTGATTGTAATCACCTCCCACCACTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS GCA 90 bp ATTTCCTCAAGTTCAAAGGTAGGATCACAATTCAGCCTGCCTTTCTaGAAGGAAGACAGTTGGCTCAATCCTCAGATTACTGTATCATTC +
Preference number: 5 (lower is better)
Translates to: ISSSSKVGSQFSLPF*KEDSWLNPQITVSF
Trigger: GAATGATACAGTAATCTGAGGATTGAGCCAACTGTCTTCCTTGCAGAAAGGCAGGCTGAATTGTGATCCTACCTTTGAACTTGAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS-3UTR CAA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTGCGCTCCACGCACTTTaGTTTATTCATGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPALHAL*FIHVLH
Trigger: ATGAAGTACATGAATAAACAAAAGTGCGTGGAGCGC...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp TCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTACATTTCTCACTTCATaGCGCTCCACGCACTTTTGT +
Preference number: 5 (lower is better)
Translates to: SVIIRNFSVVLQNTCAWATFLTS*RSTHFC
Trigger: ACAAAAGTGCGTGGAGCGCAATGAAGTGAGAAATGT...AGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp TCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTTCACTGTTTCTTCCTaGAAGTGGACGTTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: SVIIRNFSVVLQNTCAWAFTVSS*KWTFCC
Trigger: GCAACAGAACGTCCACTTCAAGGAAGAAACAGTGAA...AGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp GGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTCCCTTCTTATGTAGAGGTTaGGACTCCAAAATCATTTCC +
Preference number: 5 (lower is better)
Translates to: GRPSSISVTFNLIPFMPPFLCRG*DSKIIS
Trigger: GGAAATGATTTTGGAGTCCAAACCTCTACATAAGAA...GGGAGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATAAGACACAAGAATCACTaGAACCCGGGAGGCAGATGT +
Preference number: 5 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIRHKNH*NPGGRC
Trigger: ACATCTGCCTCCCGGGTTCAAGTGATTCTTGTGTCT...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTACTTGAGACCAGGAGTTaGAAACCAACCTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLLETRS*KPTWPA
Trigger: AGCTGGCCAGGTTGGTTTCAAACTCCTGGTCTCAAG...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGGTCAGGTCTTCGCAGTaGCCAGCTTACTGCCATCTT +
Preference number: 5 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLVRSSQ*PAYCHL
Trigger: AAGATGGCAGTAAGCTGGCAACTGCGAAGACCTGAC...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAGGATGCAAACAAGGTaGCAGCGAGAGGAGGAACCT +
Preference number: 5 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLRMQTR*QREEEP
Trigger: AGGTTCCTCCTCTCGCTGCAACCTTGTTTGCATCCT...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGATTCCTGGAATTAGGGTaGTGGCATAAGTTGCCGGGT +
Preference number: 5 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGFLELG*WHKLPG
Trigger: ACCCGGCAACTTATGCCACAACCCTAATTCCAGGAA...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp ACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGCCTTTGTCCATTTGTCACTaGTGGGTCTTTGGTTTGTTC +
Preference number: 5 (lower is better)
Translates to: TGRPSSISVTFNLIPFMPLSICH*WVFGLF
Trigger: GAACAAACCAAAGACCCACAAGTGACAAATGGACAA...AGGCATGAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398523.3
ENST00000648628.1
CDS GCA 90 bp CTGTCTAATGTCACTATTTTAGAACTCTGGAGTCTATTGAAAGCTTaGAACTTTCAGGGAAGGCTTGGGTGGCAAAGCGCAGTTAATTAT +
Preference number: 5 (lower is better)
Translates to: LSNVTILELWSLLKA*NFQGRLGWQSAVNY
Trigger: ATAATTAACTGCGCTTTGCCACCCAAGCCTTCCCTGAAAGTTGCAAGCTTTCAATAGACTCCAGAGTTCTAAAATAGTGACATTAGACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS-3UTR CAA 90 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCATGTCTTCCTCATCTaGGAAGGAATACCACAAATT +
Preference number: 5 (lower is better)
Translates to: YQKLQCSFAKYMCLGFGLHVFLI*EGIPQI
Trigger: AATTTGTGGTATTCCTTCCAAGATGAGGAAGACATG...GAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAAGCATCGCAGCAATGTaGAAATCTGTGATGTGCACG +
Preference number: 5 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGSIAAM*KSVMCT
Trigger: CGTGCACATCACAGATTTCAACATTGCTGCGATGCT...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp AAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTGAAAAACTTCAGTGTAGTTTaGCAAAATACATGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: KLQCSFAKYMCLGFGLLKNFSVV*QNTCAW
Trigger: CCAGGCACATGTATTTTGCAAAACTACACTGAAGTT...TTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS TCA 90 bp TTAGAATTCCGTCATTCCTGTGAACAGACACTCTTCTGTGAGGCTTaGTATCATAAAATTCTGCTTGTGGCAAAGAACAGACATCATCTC +
Preference number: 5 (lower is better)
Translates to: LEFRHSCEQTLFCEA*YHKILLVAKNRHHL
Trigger: GAGATGATGTCTGTTCTTTGCCACAAGCAGAATTTTATGATATCAAGCCTCACAGAAGAGTGTCTGTTCACAGGAATGACGGAATTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS-3UTR CAA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCATGATCTGGAGTTCCTaGAAGACATTTCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: HITGRPSSISVTFNLIPFMIWSS*KTFLTS
Trigger: TGAAGTGAGAAATGTCTTCAAGGAACTCCAGATCAT...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp TCCGTCATTATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTGCCTGGGCTATGATCTGGAGTTCCTaGAAGACATTTCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: SVIIRNFSVVLQNTCAWAMIWSS*KTFLTS
Trigger: TGAAGTGAGAAATGTCTTCAAGGAACTCCAGATCAT...AGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATAATGACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS-3UTR CAA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGAAGAGTCAAGGTGCTCTaGAAGAAGACATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGRVKVL*KKTCLR
Trigger: TCTCAGACATGTCTTCTTCAAGAGCACCTTGACTCT...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp AAAGGTGACACTGTATTGGGCTTTACTGAGAAAAGATACTTCCCATATACTTTAACCACTTTCACATTGTaGAAGAGGGAGCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: KGDTVLGFTEKRYFPYTLTTFTL*KRELGS
Trigger: ACTTCCCAGCTCCCTCTTCAACAATGTGAAAGTGGT...TAAAGTATATGGGAAGTATCTTTTCTCAGTAAAGCCCAATACAGTGTCACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp CATATCACTGGAAGGCCCTCATCCATCTCTGTTACTTTTAATCTGATTCCATTCTCTAGTGGTTTCTGGTaGAAACTTTCCTATCAGAAG +
Preference number: 5 (lower is better)
Translates to: HITGRPSSISVTFNLIPFSSGFW*KLSYQK
Trigger: CTTCTGATAGGAAAGTTTCAACCAGAAACCACTAGA...GAATGGAATCAGATTAAAAGTAACAGAGATGGATGAGGGCCTTCCAGTGATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS-3UTR CAA 90 bp AAGAGACATGTTCCACCTAGTGGGATATTAACGTTTAGCCCAAGTTATAGAATAGGTACAGAAACAAGCTaGAAGTGCTTTTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: KRHVPPSGILTFSPSYRIGTETS*KCFLCL
Trigger: AAGGCACAAAAAGCACTTCAAGCTTGTTTCTGTACC...TATTCTATAACTTGGGCTAAACGTTAATATCCCACTAGGTGGAACATGTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS CCA 90 bp AAGAACTACTGTCAGCTTTTCTTGACATATGTAATTAGAAGTTTCTaGCATGAGATTGTCCCAAGAAGAAGACATGAGGCCTTTACAAGT +
Preference number: 5 (lower is better)
Translates to: KNYCQLFLTYVIRSF*HEIVPRRRHEAFTS
Trigger: ACTTGTAAAGGCCTCATGTCTTCTTCTTGGGACAATCTCATGCCAGAAACTTCTAATTACATATGTCAAGAAAAGCTGACAGTAGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397936.8
CDS-3UTR CAA 90 bp TGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGGCGCTCCACGCACTTTaGTTTATTCATGTACTTCAT +
Preference number: 5 (lower is better)
Translates to: WCKCSHYYQFQVTTFTLLALHAL*FIHVLH
Trigger: ATGAAGTACATGAATAAACAAAAGTGCGTGGAGCGC...CAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp TTTCCGTGGTGTAAATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACACATGTCTTCCTCATCTaGGAAGGAATACCACAAATT +
Preference number: 5 (lower is better)
Translates to: FPWCKCSHYYQFQVTTFTHVFLI*EGIPQI
Trigger: AATTTGTGGTATTCCTTCCAAGATGAGGAAGACATG...TGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCATTTACACCACGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397936.8
ENST00000648628.1
CDS TCA 90 bp CAGTTTATATCATTCATATACGGGAAGTTCTGGACATCAGATAACTaGGAAAATCGTTGGTCTGGATTAGGTTCGAGTAGCTTTTTAAGA +
Preference number: 5 (lower is better)
Translates to: QFISFIYGKFWTSDN*ENRWSGLGSSSFLR
Trigger: TCTTAAAAAGCTACTCGAACCTAATCCAGACCAACGATTTTCTCAGTTATCTGATGTCCAGAACTTCCCGTATATGAATGATATAAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS-3UTR CAA 90 bp ATGCTCCCATTATTACCAATTTCAAGTTACCACTTTCACATTGTTGAAGAGGGATTCTTATGTAGAGGTTaGGACTCCAAAATCATTTCC +
Preference number: 5 (lower is better)
Translates to: MLPLLPISSYHFHIVEEGFLCRG*DSKIIS
Trigger: GGAAATGATTTTGGAGTCCAAACCTCTACATAAGAA...TCCCTCTTCAACAATGTGAAAGTGGTAACTTGAAATTGGTAATAATGGGAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS CCA 72 bp CTGGGCTGGGCTGGGCTGCGCTGGACTGAGCTGGGCTaGGCTGGGGAGGCACCTGCGGCTGCCAAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LGWAGLRWTELG*AGEAPAAAKGS
Trigger: GGACCCCTTGGCAGCCGCAGGTGCCTCCCCAGCCCAGCCCAGCTCAGTCCAGCGCAGCCCAGCCCAGCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS GCA 72 bp AACTCCAAGAGCAAGGAGCAAGAAAAGGCACCTATCTaGCCGGAAGCGGCGGAGGCTGCGAGCGCCGGGCTG +
Preference number: 6 (lower is better)
Translates to: NSKSKEQEKAPI*PEAAEAASAGL
Trigger: CAGCCCGGCGCTCGCAGCCTCCGCCGCTTCCGGGCAGATAGGTGCCTTTTCTTGCTCCTTGCTCTTGGAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306304.10
ENST00000397936.8
CDS CAA 90 bp CAGCCCCATGGGAGGGAGCTGAGCACACACATGTTCCGGAGCAGTTaGCACACAGCCTGTGAGAGTCAGGGTGGAAAGCAAGAACTGTGT +
Preference number: 6 (lower is better)
Translates to: QPHGRELSTHMFRSS*HTACESQGGKQELC
Trigger: ACACAGTTCTTGCTTTCCACCCTGACTCTCACAGGCTGTGTGCAAACTGCTCCGGAACATGTGTGTGCTCAGCTCCCTCCCATGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS CAA 72 bp GGGAGGGAGCTGAGCACACACATGTTCCGGAGCAGTTaGCACACAGCCTGTGAGAGTCAGGGTGGAAAGCAA +
Preference number: 6 (lower is better)
Translates to: GRELSTHMFRSS*HTACESQGGKQ
Trigger: TTGCTTTCCACCCTGACTCTCACAGGCTGTGTGCAAACTGCTCCGGAACATGTGTGTGCTCAGCTCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS TCA 72 bp CACACACATGTTCCGGAGCAGTTTGCACACAGCCTGTaGGAGTCAGGGTGGAAAGCAAGAACTGTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: HTHVPEQFAHSL*ESGWKARTVFS
Trigger: GGAGAACACAGTTCTTGCTTTCCACCCTGACTCTCACAGGCTGTGTGCAAACTGCTCCGGAACATGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS CAA 72 bp GAGCTTCACTGTTTCTTCCTTGAAGTGGACGTTCTGTaGCAGGTGATAACGCAGGTCTCCACCCAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: ELHCFFLEVDVL*QVITQVSTQQE
Trigger: CTCCTGCTGGGTGGAGACCTGCGTTATCACCTGCAACAGAACGTCCACTTCAAGGAAGAAACAGTGAAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000626951.2
ENST00000648628.1
CDS CCA 72 bp GAAGTGTTCGCTCCCATGGTTGAATCTGCCCAGACCTaGATCCTCGATTTATACTATCCGGGCAGAAACACC +
Preference number: 6 (lower is better)
Translates to: EVFAPMVESAQT*ILDLYYPGRNT
Trigger: GGTGTTTCTGCCCGGATAGTATAAATCGAGGATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000503975.1
ENST00000626951.2
ENST00000648628.1
CDS GCA 72 bp AATGTTGCTGCTAGGATCCTCAGAGGAGCTCTGGTCTaGCCTTTTAGAAACCCGGCTGATCTACTTCTCCTA +
Preference number: 6 (lower is better)
Translates to: NVAARILRGALV*PFRNPADLLLL
Trigger: TAGGAGAAGTAGATCAGCCGGGTTTCTAAAAGGGCAGACCAGAGCTCCTCTGAGGATCCTAGCAGCAACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS TCA 72 bp TCAGGGTGGAAAGCAAGAACTGTGTTCTCCAAATTCTaGGGATCTGTGCTTCCGACACTGCTGCTTCTGATC +
Preference number: 6 (lower is better)
Translates to: SGWKARTVFSKF*GSVLPTLLLLI
Trigger: GATCAGAAGCAGCAGTGTCGGAAGCACAGATCCTCAGAATTTGGAGAACACAGTTCTTGCTTTCCACCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS TCA 72 bp GTTTTGCAAAATACATGTGCCTGGGCTTCGGTCTCCTaGAACTCCAATTCAGTGGGACTTGTAGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: VLQNTCAWASVS*NSNSVGLVGEP
Trigger: TGGCTCTCCTACAAGTCCCACTGAATTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS CCA 72 bp AGTAAAATGTTGCTGCTAGGATCCTCAGAGGAGCTCTaGTCTGCCCTTTTAGAAACCCGGCTGATCTACTTC +
Preference number: 6 (lower is better)
Translates to: SKMLLLGSSEEL*SALLETRLIYF
Trigger: GAAGTAGATCAGCCGGGTTTCTAAAAGGGCAGACCAGAGCTCCTCTGAGGATCCTAGCAGCAACATTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CAA 90 bp TGCAGCAGGTACCATCTTCATTTTCATCAAACACTGGTGGTTTTCTaGAAGTGTTCGCTCCCATGGTTGAATCTGCCCAGACCTGGATCC +
Preference number: 6 (lower is better)
Translates to: CSRYHLHFHQTLVVF*KCSLPWLNLPRPGS
Trigger: GGATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACACTTCAAGAAAACCACCAGTGTTTGATGAAAATGAAGATGGTACCTGCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS CAA 90 bp TTTCATCAAACACTGGTGGTTTTCTTGAAGTGTTCGCTCCCATGGTaGAATCTGCCCAGACCTGGATCCTCGATTTATACTATCCGGGCA +
Preference number: 6 (lower is better)
Translates to: FHQTLVVFLKCSLPW*NLPRPGSSIYTIRA
Trigger: TGCCCGGATAGTATAAATCGAGGATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACACTTCAAGAAAACCACCAGTGTTTGATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000503975.1
ENST00000626951.2
ENST00000648628.1
CDS CAA 72 bp ACACTGGTGGTTTTCTTGAAGTGTTCGCTCCCATGGTaGAATCTGCCCAGACCTGGATCCTCGATTTATACT +
Preference number: 6 (lower is better)
Translates to: TLVVFLKCSLPW*NLPRPGSSIYT
Trigger: AGTATAAATCGAGGATCCAGGTCTGGGCAGATTCAACCATGGGAGCGAACACTTCAAGAAAACCACCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000503975.1
ENST00000626951.2
ENST00000648628.1
CDS CAA 90 bp CAAGTTAATGGCAGAACTCTAGACGGAAAGCCTACAAGTAAAATGTaGCTGCTAGGATCCTCAGAGGAGCTCTGGTCTGCCCTTTTAGAA +
Preference number: 6 (lower is better)
Translates to: QVNGRTLDGKPTSKM*LLGSSEELWSALLE
Trigger: TTCTAAAAGGGCAGACCAGAGCTCCTCTGAGGATCCTAGCAGCAACATTTTACTTGTAGGCTTTCCGTCTAGAGTTCTGCCATTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CAA 90 bp GTGAACAGACACTCTTCTGTGAGGCTTGATATCATAAAATTCTGCTaGTGGCAAAGAACAGACATCATCTCTAGGGTTGGCTGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: VNRHSSVRLDIIKFC*WQRTDIISRVGCSQ
Trigger: CTGGGAGCAGCCAACCCTAGAGATGATGTCTGTTCTTTGCCACAAGCAGAATTTTATGATATCAAGCCTCACAGAAGAGTGTCTGTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS TCA 72 bp CAAGGTCACAGGCTAGTAAATGGAAGAAATGGGCTCTaGACCAAGGCCTCTCTCATTCAAAAACTCAGACTC +
Preference number: 6 (lower is better)
Translates to: QGHRLVNGRNGL*TKASLIQKLRL
Trigger: GAGTCTGAGTTTTTGAATGAGAGAGGCCTTGGTTCAGAGCCCATTTCTTCCATTTACTAGCCTGTGACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503384.1
CDS GCA 72 bp GTCACTATTTTAGAACTCTGGAGTCTATTGAAAGCTTaGAACTTTCAGGGAAGGCTTGGGTGGCAAAGCGCA +
Preference number: 6 (lower is better)
Translates to: VTILELWSLLKA*NFQGRLGWQSA
Trigger: TGCGCTTTGCCACCCAAGCCTTCCCTGAAAGTTGCAAGCTTTCAATAGACTCCAGAGTTCTAAAATAGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS CAA 72 bp TGTCACTATTTTAGAACTCTGGAGTCTATTGAAAGCTaGCAACTTTCAGGGAAGGCTTGGGTGGCAAAGCGC +
Preference number: 6 (lower is better)
Translates to: CHYFRTLESIES*QLSGKAWVAKR
Trigger: GCGCTTTGCCACCCAAGCCTTCCCTGAAAGTTGCAAGCTTTCAATAGACTCCAGAGTTCTAAAATAGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS CAA 72 bp AAGCACCAGGAATCTGTCTCCCCTCCTAGACAGCGATaGCACTGGCAGAATCTGTCTAATGTCACTATTTTA +
Preference number: 6 (lower is better)
Translates to: KHQESVSPPRQR*HWQNLSNVTIL
Trigger: TAAAATAGTGACATTAGACAGATTCTGCCAGTGCAATCGCTGTCTAGGAGGGGAGACAGATTCCTGGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS GCA 72 bp AGTTCAAAGGTAGGATCACAATTCAGCCTGCCTTTCTaGAAGGAAGACAGTTGGCTCAATCCTCAGATTACT +
Preference number: 6 (lower is better)
Translates to: SSKVGSQFSLPF*KEDSWLNPQIT
Trigger: AGTAATCTGAGGATTGAGCCAACTGTCTTCCTTGCAGAAAGGCAGGCTGAATTGTGATCCTACCTTTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS CCA 72 bp TCTTCTGTGAGGCTTGATATCATAAAATTCTGCTTGTaGCAAAGAACAGACATCATCTCTAGGGTTGGCTGC +
Preference number: 6 (lower is better)
Translates to: SSVRLDIIKFCL*QRTDIISRVGC
Trigger: GCAGCCAACCCTAGAGATGATGTCTGTTCTTTGCCACAAGCAGAATTTTATGATATCAAGCCTCACAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS CAA 72 bp TACCATCTTCATTTTCATCAAACACTGGTGGTTTTCTaGAAGTGTTCGCTCCCATGGTTGAATCTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: YHLHFHQTLVVF*KCSLPWLNLPR
Trigger: TCTGGGCAGATTCAACCATGGGAGCGAACACTTCAAGAAAACCACCAGTGTTTGATGAAAATGAAGATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000503975.1
ENST00000648628.1
CDS CAA 72 bp CTGTCTAATGTCACTATTTTAGAACTCTGGAGTCTATaGAAAGCTTGCAACTTTCAGGGAAGGCTTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LSNVTILELWSL*KACNFQGRLGW
Trigger: CCACCCAAGCCTTCCCTGAAAGTTGCAAGCTTTCAATAGACTCCAGAGTTCTAAAATAGTGACATTAGACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515832.1
CDS CAA 90 bp AAAGGTAGGATCACAATTCAGCCTGCCTTTCTGCAAGGAAGACAGTaGGCTCAATCCTCAGATTACTGTATCATTCTGAAAAACACAGCA +
Preference number: 6 (lower is better)
Translates to: KGRITIQPAFLQGRQ*AQSSDYCIILKNTA
Trigger: TGCTGTGTTTTTCAGAATGATACAGTAATCTGAGGATTGAGCCAACTGTCTTCCTTGCAGAAAGGCAGGCTGAATTGTGATCCTACCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS TCA 72 bp TCATTCATATACGGGAAGTTCTGGACATCAGATAACTaGGAAAATCGTTGGTCTGGATTAGGTTCGAGTAGC +
Preference number: 6 (lower is better)
Translates to: SFIYGKFWTSDN*ENRWSGLGSSS
Trigger: GCTACTCGAACCTAATCCAGACCAACGATTTTCTCAGTTATCTGATGTCCAGAACTTCCCGTATATGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
ENST00000648628.1
CDS TCA 72 bp ATTATGAACTCCTTCTGGACAGAGTCAAGGTGCTCTTaGAGAAGACATGTCTTCCAGGTGAACGTAGAAAAA +
Preference number: 6 (lower is better)
Translates to: IMNSFWTESRCS*RRHVFQVNVEK
Trigger: TTTTTCTACGTTCACCTGGAAGACATGTCTTCTTCAAGAGCACCTTGACTCTGTCCAGAAGGAGTTCATAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506091.1
ENST00000510953.1
ENST00000515832.1
CDS GCA 72 bp TATCAGAAACTTCAGTGTAGTTTTGCAAAATACATGTaGCTGGGCTTCGGTCTCCTGAAACTCCAATTCAGT +
Preference number: 6 (lower is better)
Translates to: YQKLQCSFAKYM*LGFGLLKLQFS
Trigger: ACTGAATTGGAGTTTCAGGAGACCGAAGCCCAGGCACATGTATTTTGCAAAACTACACTGAAGTTTCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626951.2
CDS CCA 72 bp ATCACAATTCAGCCTGCCTTTATTAGGAATGAAACCTaGAATGAGCCTCTTCTGAAAAACTGCATCCCAGTT +
Preference number: 6 (lower is better)
Translates to: ITIQPAFIRNET*NEPLLKNCIPV
Trigger: AACTGGGATGCAGTTTTTCAGAAGAGGCTCATTCCAGGTTTCATTCCTAATAAAGGCAGGCTGAATTGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306304.10
ENST00000397936.8
ENST00000398523.3
CDS CAA 72 bp ATCACAATTCAGCCTGCCTTTCTGCAAGGAAGACAGTaGGCTCAATCCTCAGATTACTGTATCATTCTGAAA +
Preference number: 6 (lower is better)
Translates to: ITIQPAFLQGRQ*AQSSDYCIILK
Trigger: TTTCAGAATGATACAGTAATCTGAGGATTGAGCCAACTGTCTTCCTTGCAGAAAGGCAGGCTGAATTGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648628.1
CDS GCA 72 bp AGACACTCTTCTGTGAGGCTTGATATCATAAAATTCTaGTTGTGGCAAAGAACAGACATCATCTCTAGGGTT +
Preference number: 6 (lower is better)
Translates to: RHSSVRLDIIKF*LWQRTDIISRV
Trigger: AACCCTAGAGATGATGTCTGTTCTTTGCCACAAGCAGAATTTTATGATATCAAGCCTCACAGAAGAGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306304.10
CDS GCA 72 bp TTTTCTGTAACAATGAGCAATGGGGGTAACTTCAACTaGCAAGGAACAGCACAGAGGACAAACAAATCATTT +
Preference number: 6 (lower is better)
Translates to: FSVTMSNGGNFN*QGTAQRTNKSF
Trigger: AAATGATTTGTTTGTCCTCTGTGCTGTTCCTTGGCAGTTGAAGTTACCCCCATTGCTCATTGTTACAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503975.1