RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000104375

Ensembl transcript IDs: ENST00000419617.7, ENST00000424861.6, ENST00000517832.1, ENST00000518165.5, ENST00000518582.5, ENST00000518627.5, ENST00000518704.1, ENST00000519420.1, ENST00000520053.1, ENST00000520440.1, ENST00000520653.1, ENST00000521649.5, ENST00000522924.1, ENST00000523159.5, ENST00000523567.1, ENST00000523601.5, ENST00000523960.1, ENST00000617590.1, ENST00000649151.1

Found 360 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAATAGCATACGGCCAAATGATCTACAAGGAAGCAGGGAGGTCCTaGAATTGTGTACTCATATCCATTTTCAACTACTGCACAGGTGAC +
Preference number: 1 (lower is better)
Translates to: KIAYGQMIYKEAGRS*NCVLISIFNYCTGD
Trigger: GTCACCTGTGCAGTAGTTGAAAATGGATATGAGTACACAATTTCAGGACCTCCCTGCTTCCTTGTAGATCATTTGGCCGTATGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR CCA 90 bp TCAGTCCCCAAGGCTTGTACCACTCAGTACAAATGTTTTTGCTACTaGGTTATCATCAGGAACATGATGTTTACCAATTCCCAGGAAATG +
Preference number: 1 (lower is better)
Translates to: SVPKACTTQYKCFCY*VIIRNMMFTNSQEM
Trigger: CATTTCCTGGGAATTGGTAAACATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGCCTTGGGGACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CCA 90 bp GGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCATACGGCCAAATGATCTA +
Preference number: 1 (lower is better)
Translates to: GEIIGPKFWLSECWW*ICGNHKNSIRPNDL
Trigger: TAGATCATTTGGCCGTATGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR TCA 90 bp GTCCTGAAATTGTGTACTCATATCCATTTTCAACTACTGCACAGGTaGCACAACCAATCAAGGCATTACCTCATTGGATGTATATCAGCA +
Preference number: 1 (lower is better)
Translates to: VLKLCTHIHFQLLHR*HNQSRHYLIGCISA
Trigger: TGCTGATATACATCCAATGAGGTAATGCCTTGATTGGTTGTGTCACCTGTGCAGTAGTTGAAAATGGATATGAGTACACAATTTCAGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR-3UTR TCA 90 bp CTTCCCTTCGAGGCACAAGCACTGACCTGTAAAAGTTGTGTTGCAGTAGCTCTCCAACTACTGCACAGGTaGCACAACCAATCAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LPFEAQALTCKSCVAVALQLLHR*HNQSRH
Trigger: ATGCCTTGATTGGTTGTGTCACCTGTGCAGTAGTTG...GAGAGCTACTGCAACACAACTTTTACAGGTCAGTGCTTGTGCCTCGAAGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR-3UTR TCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATACCATTGTCACTTTTTaGCCTCTGCCTAATTGTAGG +
Preference number: 2 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHTIVTF*PLPNCR
Trigger: CCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGT...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTTACTGGTATGCAGCTaGCAGAACAAGAGAATACAC +
Preference number: 2 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHLLVCS*QNKRIH
Trigger: GTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATACCATTGTCACTTTTTaGCCTCTGCCTAATTGTAGG +
Preference number: 2 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHTIVTF*PLPNCR
Trigger: CCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGT...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGATCATCATATTAATATaGCCCTACCTTCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKIIILI*PYLHQS
Trigger: GCTTTGGTGAAGGTAGGGTCATATTAATATGATGAT...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp TCTTCAAGGAGTCCAGGGATCTTGTACTTACATATTTTATGGTGGAGCAAAAAGAAAGTTCTGGCTTTCTaGATGTTGGTGGTGGATTTG +
Preference number: 2 (lower is better)
Translates to: SSRSPGILYLHILWWSKKKVLAF*MLVVDL
Trigger: CAAATCCACCACCAACATTCAGAAAGCCAGAACTTT...CTTTTTGCTCCACCATAAAATATGTAAGTACAAGATCCCTGGACTCCTTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR-3UTR GCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTCACTTTTTGACCTCTaGCTAATTGTAGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKSLFDL*LIVGQN
Trigger: ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR GCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTCACTTTTTGACCTCTaGCTAATTGTAGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHSLFDL*LIVGQN
Trigger: ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CCA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATTTTTGGGAATTTACCTaGGCATGTACCATTGTCACT +
Preference number: 2 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHFWEFT*ACTIVT
Trigger: AGTGACAATGGTACATGCCCAGGTAAATTCCCAAAA...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CAA 90 bp GGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATaGGTTGCACATTATCATCATATTAATATGACCCTACCTTCACCA +
Preference number: 2 (lower is better)
Translates to: GNQGMYPIAPCRKYK*VAHYHHINMTLPSP
Trigger: TGGTGAAGGTAGGGTCATATTAATATGATGATAATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGTTATCATCAGGAACATaGTGTTTACCAATTCCCAGG +
Preference number: 2 (lower is better)
Translates to: CSLGNDWSQCNHINVHSALSSGT*CLPIPR
Trigger: CCTGGGAATTGGTAAACATCATGTTCCTGATGATAA...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR GCA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATTACAACTGTCAATTCTaGCTTTTGGGAATTTACCTG +
Preference number: 2 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHYNCQF*LLGIYL
Trigger: CAGGTAAATTCCCAAAAGGCAGAATTGACAGTTGTA...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATAACAGAAACATCCTGTaGCAACAGAGCACATTTTCA +
Preference number: 2 (lower is better)
Translates to: KMAICSLGNDWSQCNHINNRNIL*QQSTFS
Trigger: TGAAAATGTGCTCTGTTGTCACAGGATGTTTCTGTT...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATAACAGAAACATCCTGTaGCAACAGAGCACATTTTCA +
Preference number: 2 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDNRNIL*QQSTFS
Trigger: TGAAAATGTGCTCTGTTGTCACAGGATGTTTCTGTT...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR TCA 90 bp TCTTCAAGGAGTCCAGGGATCTTGTACTTACATATTTTATGGTGGAGCAAAAAGTCAAAGGATAAATGCTaGGTCAAGGAACAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: SSRSPGILYLHILWWSKKSKDKC*VKEQKK
Trigger: TTTCTTCTGTTCCTTGACTCAGCATTTATCCTTTGA...CTTTTTGCTCCACCATAAAATATGTAAGTACAAGATCCCTGGACTCCTTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR-3UTR GCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGTCACTTTTTGACCTCTaGCTAATTGTAGGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: CSLGNDWSQCNHINVHSASLFDL*LIVGQN
Trigger: ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGA...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATTTTTGGGAATTTACCTaGGCATGTACCATTGTCACT +
Preference number: 2 (lower is better)
Translates to: KMAICSLGNDWSQCNHINFWEFT*ACTIVT
Trigger: AGTGACAATGGTACATGCCCAGGTAAATTCCCAAAA...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CAA 90 bp ATCTCCATAGCTTCTGTGATCAGGTCTCTTAATATTGATACAGGTTaGGCATTCTTGATAAAAGGATGCTGTAAAAGTTGTGTTGCAGTA +
Preference number: 2 (lower is better)
Translates to: ISIASVIRSLNIDTG*AFLIKGCCKSCVAV
Trigger: TACTGCAACACAACTTTTACAGCATCCTTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGCTATGGAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521649.5
3UTR-3UTR TCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATATCATCATATTAATATaGCCCTACCTTCACCAAAGC +
Preference number: 2 (lower is better)
Translates to: KMAICSLGNDWSQCNHINIIILI*PYLHQS
Trigger: GCTTTGGTGAAGGTAGGGTCATATTAATATGATGAT...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR GCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTACAACTGTCAATTCTaGCTTTTGGGAATTTACCTG +
Preference number: 2 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDYNCQF*LLGIYL
Trigger: CAGGTAAATTCCCAAAAGGCAGAATTGACAGTTGTA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCTTTTGGGAATTTACCTaGGCATGTACCATTGTCACT +
Preference number: 2 (lower is better)
Translates to: FYYWYAADRTREYTSFVLFWEFT*ACTIVT
Trigger: AGTGACAATGGTACATGCCCAGGTAAATTCCCAAAA...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGAAATGTTTTTGCTACTaGGTTATCATCAGGAACATG +
Preference number: 2 (lower is better)
Translates to: CSLGNDWSQCNHINVHSAKCFCY*VIIRNM
Trigger: CATGTTCCTGATGATAACCCAGTAGCAAAAACATTT...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR GCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTTCAGTGCTGTACAATaGAACAATAGCTTTGGATTT +
Preference number: 2 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDFSAVQ*NNSFGF
Trigger: AAATCCAAAGCTATTGTTGCATTGTACAGCACTGAA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR GCA 72 bp GTCCCCAAGGCTTGTACCACTCAGTACAAATGTTTTTaGTACTGGGTTATCATCAGGAACATGATGTTTACC +
Preference number: 3 (lower is better)
Translates to: VPKACTTQYKCF*YWVIIRNMMFT
Trigger: GGTAAACATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGCCTTGGGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CCA 72 bp ATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCATACGGCCA +
Preference number: 3 (lower is better)
Translates to: IGPKFWLSECWW*ICGNHKNSIRP
Trigger: TGGCCGTATGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR-3UTR CAA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATCCTGGGCATGTACCATaGTCACTTTTTGACCTCTGC +
Preference number: 3 (lower is better)
Translates to: KMAICSLGNDWSQCNHINPGHVP*SLFDLC
Trigger: GCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CAA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCCCTGGGCATGTACCATaGTCACTTTTTGACCTCTGC +
Preference number: 3 (lower is better)
Translates to: FYYWYAADRTREYTSFVLPGHVP*SLFDLC
Trigger: GCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CAA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGCCTGGGCATGTACCATaGTCACTTTTTGACCTCTGC +
Preference number: 3 (lower is better)
Translates to: NSFITGMQLTEQENTLLLPGHVP*SLFDLC
Trigger: GCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CAA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTAATTCCTAGTGGTTTCTaGGTCTCCAGAATAGTTAAA +
Preference number: 3 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVIPSGF*VSRIVK
Trigger: TTTAACTATTCTGGAGACCAAGAAACCACTAGGAAT...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR TCA 72 bp TTGTGTACTCATATCCATTTTCAACTACTGCACAGGTaGCACAACCAATCAAGGCATTACCTCATTGGATGT +
Preference number: 3 (lower is better)
Translates to: LCTHIHFQLLHR*HNQSRHYLIGC
Trigger: ACATCCAATGAGGTAATGCCTTGATTGGTTGTGTCACCTGTGCAGTAGTTGAAAATGGATATGAGTACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR CCA 72 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTaGTCCCAATGCAATCATATAAATGTTCATTCAGCG +
Preference number: 3 (lower is better)
Translates to: TVKMAICSLGND*SQCNHINVHSA
Trigger: CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CCA 72 bp TTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTaGCTTTCTGAATGTTGGTGGTGGATTTGTGGGAAT +
Preference number: 3 (lower is better)
Translates to: FNKIGEIIGPKF*LSECWWWICGN
Trigger: ATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
3UTR CCA 72 bp AAGGCTTGTACCACTCAGTACAAATGTTTTTGCTACTaGGTTATCATCAGGAACATGATGTTTACCAATTCC +
Preference number: 3 (lower is better)
Translates to: KACTTQYKCFCY*VIIRNMMFTNS
Trigger: GGAATTGGTAAACATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR-3UTR CAA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGATTCCTAGTGGTTTCTaGGTCTCCAGAATAGTTAAA +
Preference number: 3 (lower is better)
Translates to: CSLGNDWSQCNHINVHSAIPSGF*VSRIVK
Trigger: TTTAACTATTCTGGAGACCAAGAAACCACTAGGAAT...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR TCA 72 bp CCATTTGAGAACTACTGCCATTATTGCTTTCCTATTTaGAAAACTATCCTGGAAATCAAGGAATGTACCCCA +
Preference number: 3 (lower is better)
Translates to: PFENYCHYCFPI*KTILEIKECTP
Trigger: TGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAAATAGGAAAGCAATAATGGCAGTAGTTCTCAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR GCA 72 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATaGAACAATAGCTTTGGATTTTCAAGGTTTAGAGAC +
Preference number: 3 (lower is better)
Translates to: EYCNIKPFSAVQ*NNSFGFSRFRD
Trigger: GTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR TCA 72 bp ATCCATTTCATAACAGTTTTATTACTGGTATGCAGCTaGCAGAACAAGAGAATACACTTCTTTTGTTCTCCT +
Preference number: 3 (lower is better)
Translates to: IHFITVLLLVCS*QNKRIHFFCSP
Trigger: AGGAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTTATGAAATGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR TCA 72 bp AGTATAAATTGGTTGCACATTATCATCATATTAATATaGCCCTACCTTCACCAAAGCTATCCTGATCTTGTC +
Preference number: 3 (lower is better)
Translates to: SINWLHIIIILI*PYLHQSYPDLV
Trigger: GACAAGATCAGGATAGCTTTGGTGAAGGTAGGGTCATATTAATATGATGATAATGTGCAACCAATTTATACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp AACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTTAGGCGCCGGCGGCTaGTCCATGGCGGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: NKIGEIIGPKFWLSECWWLGAGG*SMAAGD
Trigger: GTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAA...CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp TCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTGGATTTGTGGGAATCATACCGGCGGCTGCTCCATaGCGGCCGGGGACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SDQSSGFLNVGGGFVGIIPAAAP*RPGTER
Trigger: TCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGG...TATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR GCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGTTAGGCGCCGGCGGCTaGTCCATGGCGGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSALGAGG*SMAAGD
Trigger: GTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAA...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGCCGGCGGCTGCTCCATaGCGGCCGGGGACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMPAAAP*RPGTER
Trigger: TCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGG...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR GCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTAGGCGCCGGCGGCTaGTCCATGGCGGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGLGAGG*SMAAGD
Trigger: GTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR GCA 90 bp TTCTTCACCAAACACTTTTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTTTAGGCGCCGGCGGCTaGTCCATGGCGGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: FFTKHFLTKSVKSSDQSSLGAGG*SMAAGD
Trigger: GTCCCCGGCCGCCATGGAGCAGCCGCCGGCGCCTAA...AGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAAAAGTGTTTGGTGAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATCCGGCGGCTGCTCCATaGCGGCCGGGGACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDPAAAP*RPGTER
Trigger: TCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGG...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp CTTTTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTCCGGCGGCTGCTCCATaGCGGCCGGGGACAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LFNKIGEIIGPKFWLSECPAAAP*RPGTER
Trigger: TCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGG...ACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR GCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATCCCCTTCACTCATCGTaGTTGTGGCCCGCATGGTGC +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHPLHSS*LWPAWC
Trigger: GCACCATGCGGGCCACAAGCACGATGAGTGAAGGGG...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCGAGAGAGGGACCTGGTaGACGGCGAAGGCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETERGTW*TAKAER
Trigger: CCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTC...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp ACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTACAGAGAGAGGGACCTaGTGGACGGCGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: TKSVKSSDQSSGFLNVGGTERGT*WTAKAE
Trigger: TTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGT...ACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGCACTCATCGTGCTTGTaGCCCGCATGGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKHSSCL*PAWCPH
Trigger: GTGTGGGCACCATGCGGGCCACAAGCACGATGAGTG...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CTCAGGATTCTTCACCAAACACTTTTTAACAAAATCGGTGAAATCATCGGACCAGAGAGAGGGACCTGGTaGACGGCGAAGGCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: LRILHQTLFNKIGEIIGPERGTW*TAKAER
Trigger: CCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTC...TGGTCCGATGATTTCACCGATTTTGTTAAAAAGTGTTTGGTGAAGAATCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGGAGAGAGGGACCTGGTaGACGGCGAAGGCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSAERGTW*TAKAER
Trigger: CCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTC...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCTGCTTGTGGCCCGCATaGTGCCCACACTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETCLWPA*CPHSPH
Trigger: GTGTGGAGAGTGTGGGCACCATGCGGGCCACAAGCA...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CTCAGGATTCTTCACCAAACACTTTTTAACAAAATCGGTGAAATCATCGGACCAACAGAGAGAGGGACCTaGTGGACGGCGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: LRILHQTLFNKIGEIIGPTERGT*WTAKAE
Trigger: TTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGT...TGGTCCGATGATTTCACCGATTTTGTTAAAAAGTGTTTGGTGAAGAATCCTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR GCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATCCCCTTCACTCATCGTaGTTGTGGCCCGCATGGTGC +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINPLHSS*LWPAWC
Trigger: GCACCATGCGGGCCACAAGCACGATGAGTGAAGGGG...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGACCCCTTCACTCATCGTaGTTGTGGCCCGCATGGTGC +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGPLHSS*LWPAWC
Trigger: GCACCATGCGGGCCACAAGCACGATGAGTGAAGGGG...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ATAGCTTCTGTGATCAGGTCTCTTAATATTGATACAGGTTTGGCATTCTTGATAGAGAGAGGGACCTGGTaGACGGCGAAGGCCGAAAGG +
Preference number: 4 (lower is better)
Translates to: IASVIRSLNIDTGLAFLIERGTW*TAKAER
Trigger: CCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTC...TATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGAACAGAGAGAGGGACCTaGTGGACGGCGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGTERGT*WTAKAE
Trigger: TTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGT...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR TCA 90 bp AAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTGGATTTGTGGGACAACTACTGCACAGGTaGCACAACCAATCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: KSSDQSSGFLNVGGGFVGQLLHR*HNQSRH
Trigger: ATGCCTTGATTGGTTGTGTCACCTGTGCAGTAGTTG...TCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGACAGAGAGAGGGACCTaGTGGACGGCGAAGGCCGAA +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLTERGT*WTAKAE
Trigger: TTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGT...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTGCTTGTGGCCCGCATaGTGCCCACACTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLCLWPA*CPHSPH
Trigger: GTGTGGAGAGTGTGGGCACCATGCGGGCCACAAGCA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCTGCTTGTGGCCCGCATaGTGCCCACACTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLCLWPA*CPHSPH
Trigger: GTGTGGAGAGTGTGGGCACCATGCGGGCCACAAGCA...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCCACTCATCGTGCTTGTaGCCCGCATGGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLHSSCL*PAWCPH
Trigger: GTGTGGGCACCATGCGGGCCACAAGCACGATGAGTG...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGCACTCATCGTGCTTGTaGCCCGCATGGTGCCCACAC +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLHSSCL*PAWCPH
Trigger: GTGTGGGCACCATGCGGGCCACAAGCACGATGAGTG...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTGTTCAATCATGGTCTaGGCCCCTTCACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHCSIMV*APSLIV
Trigger: CACGATGAGTGAAGGGGCCCAGACCATGATTGAACA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATCACTGTTTATCACCATaGTCCCCAAGTCGGATTCCA +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNHCLSP*SPSRIP
Trigger: TGGAATCCGACTTGGGGACCATGGTGATAAACAGTG...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTCTCCCGTTCCATCATaGGGTCCAGTGCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHSPVPS*GPVLLT
Trigger: GGTTAAAAGCACTGGACCCCATGATGGAACGGGAGA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATCCATCGCATCCAGAATaGGCTGTCTTTTCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHPSHPE*AVFSQC
Trigger: ACACTGCGAAAAGACAGCCCATTCTGGATGCGATGG...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCCCCAGAACGCCGGCGTaGCCCAGACTCCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLPRTPA*PRLHFG
Trigger: TCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGG...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR TCA 90 bp ATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTGGATTGAGGGAGAAAACACATaGGAGAGGATCTGCTTCATA +
Preference number: 4 (lower is better)
Translates to: IGEIIGPKFWLSECWWWIEGENT*ERICFI
Trigger: TATGAAGCAGATCCTCTCTCATGTGTTTTCTCCCTC...AATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR GCA 90 bp AAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTGGATTTGTGGGAGTTGCAGTAGCTCTCTaGTCAGGATTCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: KSSDQSSGFLNVGGGFVGVAVAL*SGFFTK
Trigger: TTTGGTGAAGAATCCTGAGCAGAGAGCTACTGCAAC...TCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp AAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTGGATTTGTGGGAATCGGACCAAAGTTCTaGCTTTCTGAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSSDQSSGFLNVGGGFVGIGPKF*LSECWW
Trigger: CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT...TCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATATCGGACCAAAGTTCTaGCTTTCTGAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNIGPKF*LSECWW
Trigger: CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTAGTCTTCACCATGGTGTaGGAATCCAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVVFTMV*ESSSSS
Trigger: TGAAGATGAGCTGGATTCCCACACCATGGTGAAGAC...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATGTCTTCACCATGGTGTaGGAATCCAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHVFTMV*ESSSSS
Trigger: TGAAGATGAGCTGGATTCCCACACCATGGTGAAGAC...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGGTCTTCACCATGGTGTaGGAATCCAGCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKVFTMV*ESSSSS
Trigger: TGAAGATGAGCTGGATTCCCACACCATGGTGAAGAC...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTACACTGTTTATCACCATaGTCCCCAAGTCGGATTCCA +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVHCLSP*SPSRIP
Trigger: TGGAATCCGACTTGGGGACCATGGTGATAAACAGTG...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCCCATCGCATCCAGAATaGGCTGTCTTTTCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETPSHPE*AVFSQC
Trigger: ACACTGCGAAAAGACAGCCCATTCTGGATGCGATGG...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGAAGCAGCTCGTGGGGTTaGAAATTCTGCCTACCCCTC +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGSSSWG*KFCLPL
Trigger: GAGGGGTAGGCAGAATTTCCAACCCCACGAGCTGCT...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR TCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTTCGCAGTGTATCTCTaGCGAAGTTCTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHFAVYL*RSSSIS
Trigger: GGAGATAGAAGAACTTCGTCAGAGATACACTGCGAA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGGGGGTCCGAAGAATATaGGTTTCTAGCAAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMGVRRI*VSSKFH
Trigger: GTGGAACTTGCTAGAAACGCATATTCTTCGGACCCC...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR CCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATCGGACCAAAGTTCTaGCTTTCTGAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHIGPKF*LSECWW
Trigger: CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCGCCCAGACTCCATTTTaGAACTTCGCAGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLAQTPF*NFAGWR
Trigger: ACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGC...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR CCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATCAGATTCAGCAGATTTaGAGGGGGTCCGAAGAATAT +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHQIQQI*RGSEEY
Trigger: ATATTCTTCGGACCCCCTCCAAATCTGCTGAATCTG...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523601.5
3UTR CAA 72 bp ATTCTGCCTTTTGGGAATTTACCTGGGCATGTACCATaGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAA +
Preference number: 4 (lower is better)
Translates to: ILPFGNLPGHVP*SLFDLCLIVGQ
Trigger: TTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGGTAAATTCCCAAAAGGCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATTTAATTGCGACAACTTaGCCGGATTCCTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNLIATT*PDSLCI
Trigger: AATACACAAGGAATCCGGTCAAGTTGTCGCAATTAA...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGTTCGCAGTGTATCTCTaGCGAAGTTCTTCTATCTCC +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMFAVYL*RSSSIS
Trigger: GGAGATAGAAGAACTTCGTCAGAGATACACTGCGAA...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGACCATTGTCACTTTTTaGCCTCTGCCTAATTGTAGG +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKTIVTF*PLPNCR
Trigger: CCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGT...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATTGCTGGGTGGCACAGTaGAATTTATTTGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNCWVAQ*NLFVFM
Trigger: CATAAAGACAAATAAATTTCACTGTGCCACCCAGCA...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNLSECW*WICGNH
Trigger: ATGATTCCCACAAATCCACCACCAACATTCAGAAAG...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TKSVKSSDQSSGFLNVGGWLSEC*WWICGN
Trigger: ATTCCCACAAATCCACCACCAACATTCAGAAAGCCA...ACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CCA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATATCGGACCAAAGTTCTaGCTTTCTGAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHIGPKF*LSECWW
Trigger: CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATTGTTCAATCATGGTCTaGGCCCCTTCACTCATCGTG +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINCSIMV*APSLIV
Trigger: CACGATGAGTGAAGGGGCCCAGACCATGATTGAACA...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCAGAGGGAGCAGCTCGTaGGGTTGGAAATTCTGCCTA +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLRGSSS*GWKFCL
Trigger: TAGGCAGAATTTCCAACCCCACGAGCTGCTCCCTCT...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTGGAACTTCGCAGGCTaGCGTGGACGAAGTAAACAC +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLWNFAG*RGRSKH
Trigger: GTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR CCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTAAGAAGGGACATTGAATaGCCTCCACAATCTCAGATT +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVRRDIE*PPQSQI
Trigger: AATCTGAGATTGTGGAGGCCATTCAATGTCCCTTCT...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523601.5
3UTR CAA 72 bp AGTCCCCAAGGCTTGTACCACTCAGTACAAATGTTTTaGCTACTGGGTTATCATCAGGAACATGATGTTTAC +
Preference number: 4 (lower is better)
Translates to: SPQGLYHSVQMF*LLGYHQEHDVY
Trigger: GTAAACATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGCCTTGGGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATCGTGACTCTTATTCTTaGAGTCTTGCTTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNRDSYS*SLAYQS
Trigger: ACTTTGATAAGCAAGACTTCAAGAATAAGAGTCACG...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCTTACTGGTATGCAGCTaGCAGAACAAGAGAATACAC +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETLLVCS*QNKRIH
Trigger: GTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAA...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATATCATCATATTAATATaGCCCTACCTTCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNIIILI*PYLHQS
Trigger: GCTTTGGTGAAGGTAGGGTCATATTAATATGATGAT...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp AACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGAGGTACTTGTTTAATTaGGACAACTTGACCGGATTC +
Preference number: 4 (lower is better)
Translates to: NKIGEIIGPKFWLSECWWRYLFN*DNLTGF
Trigger: GAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCT...CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR GCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTAAGGTACTTGTTTAATTaGGACAACTTGACCGGATTC +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVRYLFN*DNLTGF
Trigger: GAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCT...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGGTTGCAGTAGCTCTCTaGTCAGGATTCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSAVAVAL*SGFFTK
Trigger: TTTGGTGAAGAATCCTGAGCAGAGAGCTACTGCAAC...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATCGGATTCCAACATCGTaGTATTATGTTCAATCATGG +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHRIPTS*YYVQSW
Trigger: CCATGATTGAACATAATAGCACGATGTTGGAATCCG...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTACCCCATAGCTCCCTaGAGAAAGTATAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHYPIAP*RKYKLV
Trigger: AACCAATTTATACTTTCTGCAGGGAGCTATGGGGTA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCCACAGAGGGAAACTCTaGGAACTCGGACCAACTTTC +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLHRGKL*ELGPTF
Trigger: GAAAGTTGGTCCGAGTTCCCAGAGTTTCCCTCTGTG...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR CCA 90 bp AATTCTGGCCAATGTCAGAAAGCTGAAAGGTATGAAGAAAATATCCTTCCCTTCATCGGACCAAAGTTCTaGCTTTCTGAATGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: NSGQCQKAERYEENILPFIGPKF*LSECWW
Trigger: CCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT...GAAGGGAAGGATATTTTCTTCATACCTTTCAGCTTTCTGACATTGGCCAGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGTATTATGTTCAATCATaGTCTGGGCCCCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMYYVQS*SGPLHS
Trigger: TGAGTGAAGGGGCCCAGACCATGATTGAACATAATA...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCTATTATGTTCAATCATaGTCTGGGCCCCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETYYVQS*SGPLHS
Trigger: TGAGTGAAGGGGCCCAGACCATGATTGAACATAATA...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGACACTGTTTATCACCATaGTCCCCAAGTCGGATTCCA +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGHCLSP*SPSRIP
Trigger: TGGAATCCGACTTGGGGACCATGGTGATAAACAGTG...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTCTCCCGTTCCATCATaGGGTCCAGTGCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLSPVPS*GPVLLT
Trigger: GGTTAAAAGCACTGGACCCCATGATGGAACGGGAGA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCTCTCCCGTTCCATCATaGGGTCCAGTGCTTTTAACC +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLSPVPS*GPVLLT
Trigger: GGTTAAAAGCACTGGACCCCATGATGGAACGGGAGA...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCCCATCGCATCCAGAATaGGCTGTCTTTTCGCAGTGT +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLPSHPE*AVFSQC
Trigger: ACACTGCGAAAAGACAGCCCATTCTGGATGCGATGG...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATCTTTGTACTTGTGGTaGGGTTGCATTTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVSLYLW*GCISFH
Trigger: ATGAAAAGAAATGCAACCTCACCACAAGTACAAAGA...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTCTTTGTACTTGTGGTaGGGTTGCATTTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKSLYLW*GCISFH
Trigger: ATGAAAAGAAATGCAACCTCACCACAAGTACAAAGA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATCGTGACTCTTATTCTTaGAGTCTTGCTTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHRDSYS*SLAYQS
Trigger: ACTTTGATAAGCAAGACTTCAAGAATAAGAGTCACG...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGTCAAAGTCTCCATCTTaGGGAACTTTCCAGTTATCA +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMSKSPS*GTFQLS
Trigger: TGATAACTGGAAAGTTCCTCAAGATGGAGACTTTGA...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCAACAGAAACATCCTGTaGCAACAGAGCACATTTTCA +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETNRNIL*QQSTFS
Trigger: TGAAAATGTGCTCTGTTGTCACAGGATGTTTCTGTT...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATTGCTGGGTGGCACAGTaGAATTTATTTGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHCWVAQ*NLFVFM
Trigger: CATAAAGACAAATAAATTTCACTGTGCCACCCAGCA...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000617590.1
CDS-3UTR TCA 90 bp TTTTTGATTCCTTTCACCCTGAGTACATTAATGGGTGGCTTTATGAGCATTTTATCGAGGCACAAGCACTaGCCTGTAAAAGTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: FLIPFTLSTLMGGFMSILSRHKH*PVKVVL
Trigger: CAACACAACTTTTACAGGTCAGTGCTTGTGCCTCGA...TAAAATGCTCATAAAGCCACCCATTAATGTACTCAGGGTGAAAGGAATCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR TCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGCTGAAGAAGGGACATTaGATGGCCTCCACAATCTCA +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLLKKGH*MASTIS
Trigger: TGAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAG...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR GCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGAGGTACTTGTTTAATTaGGACAACTTGACCGGATTC +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMRYLFN*DNLTGF
Trigger: GAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCT...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GTACTCATATCCATTTTCAACTACTGCACAGGTGACACAACCAATCAAGGCATTAGGTACTTGTTTAATTaGGACAACTTGACCGGATTC +
Preference number: 4 (lower is better)
Translates to: VLISIFNYCTGDTTNQGIRYLFN*DNLTGF
Trigger: GAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCT...AATGCCTTGATTGGTTGTGTCACCTGTGCAGTAGTTGAAAATGGATATGAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR GCA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTATGGGCTGTCACATTaGTGCATTATGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHYGLSH*CIMEIS
Trigger: AGAAATTTCCATAATGCAGCAATGTGACAGCCCATA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGAGTTGCAGTAGCTCTCTaGTCAGGATTCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGVAVAL*SGFFTK
Trigger: TTTGGTGAAGAATCCTGAGCAGAGAGCTACTGCAAC...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTCTTCCAATTCTCGTTaGTGTTCCTCATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKSSNSR*CSSCLL
Trigger: TAAAAGACATGAGGAACAGCAACGAGAATTGGAAGA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATCTTCCAATTCTCGTTaGTGTTCCTCATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVSSNSR*CSSCLL
Trigger: TAAAAGACATGAGGAACAGCAACGAGAATTGGAAGA...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCCGGATTCCAACATCGTaGTATTATGTTCAATCATGG +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETRIPTS*YYVQSW
Trigger: CCATGATTGAACATAATAGCACGATGTTGGAATCCG...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGCGGATTCCAACATCGTaGTATTATGTTCAATCATGG +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMRIPTS*YYVQSW
Trigger: CCATGATTGAACATAATAGCACGATGTTGGAATCCG...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATCACTTTTTGACCTCTaGCTAATTGTAGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVSLFDL*LIVGQN
Trigger: ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGA...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATTTCAGTGCTGTACAATaGAACAATAGCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNFSAVQ*NNSFGF
Trigger: AAATCCAAAGCTATTGTTGCATTGTACAGCACTGAA...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CAAGGAAGCAGGGAGGTCCTGAAATTGTGTACTCATATCCATTTTCAACTACTGTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAA +
Preference number: 4 (lower is better)
Translates to: QGSREVLKLCTHIHFQLLSECWW*ICGNHK
Trigger: TTTATGATTCCCACAAATCCACCACCAACATTCAGA...CAGTAGTTGAAAATGGATATGAGTACACAATTTCAGGACCTCCCTGCTTCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAA +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKSECWW*ICGNHK
Trigger: TTTATGATTCCCACAAATCCACCACCAACATTCAGA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TCTTCAAGGAGTCCAGGGATCTTGTACTTACATATTTTATGGTGGAGCAAAAAGTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SSRSPGILYLHILWWSKKWLSEC*WWICGN
Trigger: ATTCCCACAAATCCACCACCAACATTCAGAAAGCCA...CTTTTTGCTCCACCATAAAATATGTAAGTACAAGATCCCTGGACTCCTTGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CCA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGAGCTTAGGAAATGACTaGTCCCAATGCAATCATATA +
Preference number: 4 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKSLGND*SQCNHI
Trigger: TATATGATTGCATTGGGACCAGTCATTTCCTAAGCT...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp ACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTAATTCAGCTCCAAGATaGAAAAGCGTTAGATCCATT +
Preference number: 4 (lower is better)
Translates to: TKSVKSSDQSSGFLNVGGNSAPR*KSVRSI
Trigger: AATGGATCTAACGCTTTTCCATCTTGGAGCTGAATT...ACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR TCA 90 bp TCTTCAAGGAGTCCAGGGATCTTGTACTTACATATTTTATGGTGGAGCAAAAAGTTAATTGCGACAACTTaGCCGGATTCCTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: SSRSPGILYLHILWWSKKLIATT*PDSLCI
Trigger: AATACACAAGGAATCCGGTCAAGTTGTCGCAATTAA...CTTTTTGCTCCACCATAAAATATGTAAGTACAAGATCCCTGGACTCCTTGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR TCA 90 bp TTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTTAATTGCGACAACTTaGCCGGATTCCTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: FNKIGEIIGPKFWLSECWLIATT*PDSLCI
Trigger: AATACACAAGGAATCCGGTCAAGTTGTCGCAATTAA...CCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR TCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGAAAAGTTCTGGCTTTCTaGATGTTGGTGGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGKVLAF*MLVVDL
Trigger: CAAATCCACCACCAACATTCAGAAAGCCAGAACTTT...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGTCAAAGTCTCCATCTTaGGGAACTTTCCAGTTATCA +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSASKSPS*GTFQLS
Trigger: TGATAACTGGAAAGTTCCTCAAGATGGAGACTTTGA...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATACCATTGTCACTTTTTaGCCTCTGCCTAATTGTAGG +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINTIVTF*PLPNCR
Trigger: CCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGT...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTTACTGGTATGCAGCTaGCAGAACAAGAGAATACAC +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDLLVCS*QNKRIH
Trigger: GTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTACTGGTATGCAGCTaGCAGAACAAGAGAATACAC +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGLLVCS*QNKRIH
Trigger: GTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGAACAGAAACATCCTGTaGCAACAGAGCACATTTTCA +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSANRNIL*QQSTFS
Trigger: TGAAAATGTGCTCTGTTGTCACAGGATGTTTCTGTT...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGAGGTACTTGTTTAATTaGGACAACTTGACCGGATTC +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSARYLFN*DNLTGF
Trigger: GAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCT...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TTTTTGATTCCTTTCACCCTGAGTACATTAATGGGTGGCTTTATGAGCATTTTAGTTGCAGTAGCTCTCTaGTCAGGATTCTTCACCAAA +
Preference number: 4 (lower is better)
Translates to: FLIPFTLSTLMGGFMSILVAVAL*SGFFTK
Trigger: TTTGGTGAAGAATCCTGAGCAGAGAGCTACTGCAAC...TAAAATGCTCATAAAGCCACCCATTAATGTACTCAGGGTGAAAGGAATCAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR GCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCTCTTCCAATTCTCGTTaGTGTTCCTCATGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETSSNSR*CSSCLL
Trigger: TAAAAGACATGAGGAACAGCAACGAGAATTGGAAGA...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATTCACTTTTTGACCTCTaGCTAATTGTAGGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHSLFDL*LIVGQN
Trigger: ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGA...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCTACAACTGTCAATTCTaGCTTTTGGGAATTTACCTG +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETYNCQF*LLGIYL
Trigger: CAGGTAAATTCCCAAAAGGCAGAATTGACAGTTGTA...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAA +
Preference number: 4 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMSECWW*ICGNHK
Trigger: TTTATGATTCCCACAAATCCACCACCAACATTCAGA...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSALSECW*WICGNH
Trigger: ATGATTCCCACAAATCCACCACCAACATTCAGAAAG...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGWLSEC*WWICGN
Trigger: ATTCCCACAAATCCACCACCAACATTCAGAAAGCCA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDWLSEC*WWICGN
Trigger: ATTCCCACAAATCCACCACCAACATTCAGAAAGCCA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTATTATGTTCAATCATaGTCTGGGCCCCTTCACTCA +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDYYVQS*SGPLHS
Trigger: TGAGTGAAGGGGCCCAGACCATGATTGAACATAATA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCAGCTTAGGAAATGACTaGTCCCAATGCAATCATATA +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETSLGND*SQCNHI
Trigger: TATATGATTGCATTGGGACCAGTCATTTCCTAAGCT...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTAATTGCGACAACTTaGCCGGATTCCTTGTGTATT +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGLIATT*PDSLCI
Trigger: AATACACAAGGAATCCGGTCAAGTTGTCGCAATTAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATTCAAAGTCTCCATCTTaGGGAACTTTCCAGTTATCA +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINSKSPS*GTFQLS
Trigger: TGATAACTGGAAAGTTCCTCAAGATGGAGACTTTGA...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGACCATTGTCACTTTTTaGCCTCTGCCTAATTGTAGG +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLTIVTF*PLPNCR
Trigger: CCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGT...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTATCATCAGGAACATaGTGTTTACCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGLSSGT*CLPIPR
Trigger: CCTGGGAATTGGTAAACATCATGTTCCTGATGATAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATTTATCATCAGGAACATaGTGTTTACCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINLSSGT*CLPIPR
Trigger: CCTGGGAATTGGTAAACATCATGTTCCTGATGATAA...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp CAAGGAGTCCAGGGATCTTGTACTTACATATTTTATGGTGGAGCAAAAAGTCAATCAAAGGATAAATGCTaGGTCAAGGAACAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QGVQGSCTYIFYGGAKSQSKDKC*VKEQKK
Trigger: TTTCTTCTGTTCCTTGACTCAGCATTTATCCTTTGA...TTGACTTTTTGCTCCACCATAAAATATGTAAGTACAAGATCCCTGGACTCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR TCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGACTTTTTCCAAATTCCTaGAGAAGGGACATTGAATGG +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGLFPNS*RRDIEW
Trigger: CCATTCAATGTCCCTTCTTCAGGAATTTGGAAAAAG...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS-3UTR GCA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGTACAACTGTCAATTCTaGCTTTTGGGAATTTACCTG +
Preference number: 4 (lower is better)
Translates to: CSLGNDWSQCNHINVHSAYNCQF*LLGIYL
Trigger: CAGGTAAATTCCCAAAAGGCAGAATTGACAGTTGTA...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCCCATTTGAGAACTACTaGCATTATTGCTTTCCTATT +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETPFENY*HYCFPI
Trigger: AATAGGAAAGCAATAATGGCAGTAGTTCTCAAATGG...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLWLSEC*WWICGN
Trigger: ATTCCCACAAATCCACCACCAACATTCAGAAAGCCA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTGGGAATTTACCTaGGCATGTACCATTGTCACT +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGFWEFT*ACTIVT
Trigger: AGTGACAATGGTACATGCCCAGGTAAATTCCCAAAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCAAATGTTTTTGCTACTaGGTTATCATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: PSVLYNATIALDFQGLETKCFCY*VIIRNM
Trigger: CATGTTCCTGATGATAACCCAGTAGCAAAAACATTT...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CAA 72 bp GGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATaGGTTGCACATTATCATCATATTAATATGACCCTA +
Preference number: 4 (lower is better)
Translates to: GMYPIAPCRKYK*VAHYHHINMTL
Trigger: TAGGGTCATATTAATATGATGATAATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATCGTGACTCTTATTCTTaGAGTCTTGCTTATCAAAGT +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINRDSYS*SLAYQS
Trigger: ACTTTGATAAGCAAGACTTCAAGAATAAGAGTCACG...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGAATCATCATATTAATATaGCCCTACCTTCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGIIILI*PYLHQS
Trigger: GCTTTGGTGAAGGTAGGGTCATATTAATATGATGAT...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTATCATCAGGAACATaGTGTTTACCAATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLLSSGT*CLPIPR
Trigger: CCTGGGAATTGGTAAACATCATGTTCCTGATGATAA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp TCCAAAATGGAGTTCCTATTACAGTATTGCGTTTTGCCATTGTATCTGTTAACTTGGTCAGATTTATACTaGAAACACCAAGAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SKMEFLLQYCVLPLYLLTWSDLY*KHQEGE
Trigger: TTCTCCCTCTTGGTGTTTTCAGTATAAATCTGACCA...AGTTAACAGATACAATGGCAAAACGCAATACTGTAATAGGAACTCCATTTTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR GCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATAAAACTTCTTCAGGCTaGTTAGTCAAACTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINKTSSG*LVKLSS
Trigger: TGAAGACAGTTTGACTAAGCAGCCTGAAGAAGTTTT...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp AGTCCAGGGATCTTGTACTTACATATTTTATGGTGGAGCAAAAAGTCAAAGGATTATGGGCTGTCACATTaGTGCATTATGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: SPGILYLHILWWSKKSKDYGLSH*CIMEIS
Trigger: AGAAATTTCCATAATGCAGCAATGTGACAGCCCATA...ATCCTTTGACTTTTTGCTCCACCATAAAATATGTAAGTACAAGATCCCTGGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR GCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTACCCCATAGCTCCCTaGAGAAAGTATAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLYPIAP*RKYKLV
Trigger: AACCAATTTATACTTTCTGCAGGGAGCTATGGGGTA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCTACCCCATAGCTCCCTaGAGAAAGTATAAATTGGTT +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLYPIAP*RKYKLV
Trigger: AACCAATTTATACTTTCTGCAGGGAGCTATGGGGTA...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAA +
Preference number: 4 (lower is better)
Translates to: KMAICSLGNDWSQCNHINSECWW*ICGNHK
Trigger: TTTATGATTCCCACAAATCCACCACCAACATTCAGA...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLLSECW*WICGNH
Trigger: ATGATTCCCACAAATCCACCACCAACATTCAGAAAG...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TATTTACAACGTGATAATCTCTTCAAGGAGTCCAGGGATCTTGTACTTACATATCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: YLQRDNLFKESRDLVLTYLSECW*WICGNH
Trigger: ATGATTCCCACAAATCCACCACCAACATTCAGAAAG...ATATGTAAGTACAAGATCCCTGGACTCCTTGAAGAGATTATCACGTTGTAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CCA 90 bp ATAGCTTCTGTGATCAGGTCTCTTAATATTGATACAGGTTTGGCATTCTTGATACTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCAT +
Preference number: 4 (lower is better)
Translates to: IASVIRSLNIDTGLAFLILSECW*WICGNH
Trigger: ATGATTCCCACAAATCCACCACCAACATTCAGAAAG...TATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTTTGGGAATTTACCTaGGCATGTACCATTGTCACT +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLFWEFT*ACTIVT
Trigger: AGTGACAATGGTACATGCCCAGGTAAATTCCCAAAA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATAGCTTAGGAAATGACTaGTCCCAATGCAATCATATA +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDSLGND*SQCNHI
Trigger: TATATGATTGCATTGGGACCAGTCATTTCCTAAGCT...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTCTTTGTACTTGTGGTaGGGTTGCATTTCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLSLYLW*GCISFH
Trigger: ATGAAAAGAAATGCAACCTCACCACAAGTACAAAGA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR TCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGATCATCATATTAATATaGCCCTACCTTCACCAAAGC +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLIIILI*PYLHQS
Trigger: GCTTTGGTGAAGGTAGGGTCATATTAATATGATGAT...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTATGGGCTGTCACATTaGTGCATTATGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLYGLSH*CIMEIS
Trigger: AGAAATTTCCATAATGCAGCAATGTGACAGCCCATA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCTATGGGCTGTCACATTaGTGCATTATGGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLYGLSH*CIMEIS
Trigger: AGAAATTTCCATAATGCAGCAATGTGACAGCCCATA...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTACAACTGTCAATTCTaGCTTTTGGGAATTTACCTG +
Preference number: 4 (lower is better)
Translates to: NSFITGMQLTEQENTLLLYNCQF*LLGIYL
Trigger: CAGGTAAATTCCCAAAAGGCAGAATTGACAGTTGTA...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTCAGTGCTGTACAATaGAACAATAGCTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGFSAVQ*NNSFGF
Trigger: AAATCCAAAGCTATTGTTGCATTGTACAGCACTGAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATCCATTTGAGAACTACTaGCATTATTGCTTTCCTATT +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDPFENY*HYCFPI
Trigger: AATAGGAAAGCAATAATGGCAGTAGTTCTCAAATGG...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR GCA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGACCATTTGAGAACTACTaGCATTATTGCTTTCCTATT +
Preference number: 4 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGPFENY*HYCFPI
Trigger: AATAGGAAAGCAATAATGGCAGTAGTTCTCAAATGG...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CCA 90 bp GCTTCTGTGATCAGGTCTCTTAATATTGATACAGGTTTGGCATTCTTGATAAAATCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAA +
Preference number: 4 (lower is better)
Translates to: ASVIRSLNIDTGLAFLIKSECWW*ICGNHK
Trigger: TTTATGATTCCCACAAATCCACCACCAACATTCAGA...TTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CCA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATAAATGTTTTTGCTACTaGGTTATCATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDKCFCY*VIIRNM
Trigger: CATGTTCCTGATGATAACCCAGTAGCAAAAACATTT...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
3UTR CAA 72 bp ATCAGGTCTCTTAATATTGATACAGGTTTGGCATTCTaGATAAAAGGATGCTGTAAAAGTTGTGTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: IRSLNIDTGLAF*IKGCCKSCVAV
Trigger: TACTGCAACACAACTTTTACAGCATCCTTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CCA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCAAATGTTTTTGCTACTaGGTTATCATCAGGAACATG +
Preference number: 4 (lower is better)
Translates to: FYYWYAADRTREYTSFVLKCFCY*VIIRNM
Trigger: CATGTTCCTGATGATAACCCAGTAGCAAAAACATTT...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 90 bp CCGGCGGCTGCTCCATGGCGGCCGGGGACAGAGAGAGGGACCTGGTaGACGGCGAAGGCCGAAAGGAGGAAAGGAGCCGGGGCACCGGCC +
Preference number: 5 (lower is better)
Translates to: PAAAPWRPGTERGTW*TAKAERRKGAGAPA
Trigger: GGCCGGTGCCCCGGCTCCTTTCCTCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000419617.7
ENST00000424861.6
ENST00000518165.5
ENST00000521649.5
ENST00000617590.1
CDS CCA 90 bp GCGCCGGCGGCTGCTCCATGGCGGCCGGGGACAGAGAGAGGGACCTaGTGGACGGCGAAGGCCGAAAGGAGGAAAGGAGCCGGGGCACCG +
Preference number: 5 (lower is better)
Translates to: APAAAPWRPGTERGT*WTAKAERRKGAGAP
Trigger: CGGTGCCCCGGCTCCTTTCCTCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGCAGCCGCCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000419617.7
ENST00000424861.6
ENST00000518165.5
ENST00000521649.5
ENST00000617590.1
CDS CCA 90 bp GAATGGCCTTTTCAAGAGACCGTAGTCGTGCCCAGAACGCCGGCGTaGCCCAGACTCCATTTTGGAACTTCGCAGGCTGGCGTGGACGAA +
Preference number: 5 (lower is better)
Translates to: EWPFQETVVVPRTPA*PRLHFGTSQAGVDE
Trigger: TTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTACGGTCTCTTGAAAAGGCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519420.1
CDS TCA 90 bp AAAGGAAGTGCGAAGCGTAGGAACGCTCTTCAGGTCACCACCCCGTaGGTGGGAGGCTTGGGGAGTCTGAAGGAAGAGAAAGCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: KGSAKRRNALQVTTP*VGGLGSLKEEKAPS
Trigger: GGAGGGAGCTTTCTCTTCCTTCAGACTCCCCAAGCCTCCCACTCACGGGGTGGTGACCTGAAGAGCGTTCCTACGCTTCGCACTTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519420.1
CDS GCA 90 bp GACTTCTTGGCCACCGTTGGTGCTCCTGTTGAATATAACCGCAGATaGCAAGGGCCACAGCCGAGGAAGTGGAAAATCTGCACGGGCCCA +
Preference number: 5 (lower is better)
Translates to: DFLATVGAPVEYNRR*QGPQPRKWKICTGP
Trigger: TGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATATTCAACAGGAGCACCAACGGTGGCCAAGAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS GCA 90 bp AACCTTGCCCCGCACTCGTTAAGGCTGAGGAAGGACGCACAGCACTaGTCTCCAACCTCACCACAGTCTTTGCGTTCCATCAAGTGGGGT +
Preference number: 5 (lower is better)
Translates to: NLAPHSLRLRKDAQH*SPTSPQSLRSIKWG
Trigger: ACCCCACTTGATGGAACGCAAAGACTGTGGTGAGGTTGGAGAGCAGTGCTGTGCGTCCTTCCTCAGCCTTAACGAGTGCGGGGCAAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS CCA 90 bp GACCGTAGTCGTGCCCAGAACGCCGGCGTGGCCCAGACTCCATTTTaGAACTTCGCAGGCTGGCGTGGACGAAGTAAACACATTTATGGA +
Preference number: 5 (lower is better)
Translates to: DRSRAQNAGVAQTPF*NFAGWRGRSKHIYG
Trigger: TCCATAAATGTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519420.1
ENST00000523601.5
ENST00000523960.1
CDS CCA 90 bp TCCAAATCTTTTCAAGAGACCGTAGTCGTGCCCAGAACGCCGGCGTaGCCCAGACTCCATTTTGGAACTTCGCAGGCTGGCGTGGACGAA +
Preference number: 5 (lower is better)
Translates to: SKSFQETVVVPRTPA*PRLHFGTSQAGVDE
Trigger: TTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTACGGTCTCTTGAAAAGATTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523601.5
ENST00000523960.1
CDS TCA 90 bp GTCCTGTGGAACTCACAAGGCTTTCCAAGGCTTCTGCTGATTCACTaGGCAGTGGTGGCATCTGCAGGTGGCCTCGTCTGTGTATGCAGC +
Preference number: 5 (lower is better)
Translates to: VLWNSQGFPRLLLIH*AVVASAGGLVCVCS
Trigger: GCTGCATACACAGACGAGGCCACCTGCAGATGCCACCACTGCTCAGTGAATCAGCAGAAGCCTTGGAAAGCCTTGTGAGTTCCACAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS CCA 90 bp CAGCACTGCTCTCCAACCTCACCACAGTCTTTGCGTTCCATCAAGTaGGGTGTAGCTCAGCTCCTCCCCTTTAGCCACCATCCTAGTGAC +
Preference number: 5 (lower is better)
Translates to: QHCSPTSPQSLRSIK*GVAQLLPFSHHPSD
Trigger: GTCACTAGGATGGTGGCTAAAGGGGAGGAGCTGAGCTACACCCCACTTGATGGAACGCAAAGACTGTGGTGAGGTTGGAGAGCAGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS CCA 90 bp CCCAAGTCGGATTCCAACATCGTGCTATTATGTTCAATCATGGTCTaGGCCCCTTCACTCATCGTGCTTGTGGCCCGCATGGTGCCCACA +
Preference number: 5 (lower is better)
Translates to: PKSDSNIVLLCSIMV*APSLIVLVARMVPT
Trigger: TGTGGGCACCATGCGGGCCACAAGCACGATGAGTGAAGGGGCCCAGACCATGATTGAACATAATAGCACGATGTTGGAATCCGACTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419617.7
ENST00000518582.5
ENST00000520440.1
ENST00000523159.5
ENST00000523601.5
ENST00000617590.1
CDS GCA 90 bp AGGCTTTCCAAGGCTTCTGCTGATTCACTGAGCAGTGGTGGCATCTaGAGGTGGCCTCGTCTGTGTATGCAGCAAAAGGGTGTAGAAATC +
Preference number: 5 (lower is better)
Translates to: RLSKASADSLSSGGI*RWPRLCMQQKGVEI
Trigger: GATTTCTACACCCTTTTGCTGCATACACAGACGAGGCCACCTGCAGATGCCACCACTGCTCAGTGAATCAGCAGAAGCCTTGGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS CCA 90 bp GCCCGCATGGTGCCCACACTCTCCACACTAGTCTTCACCATGGTGTaGGAATCCAGCTCATCTTCATCCGAATTTTCTTCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ARMVPTLSTLVFTMV*ESSSSSSEFSSSSS
Trigger: GGAAGAGGAAGAAGAAAATTCGGATGAAGATGAGCTGGATTCCCACACCATGGTGAAGACTAGTGTGGAGAGTGTGGGCACCATGCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419617.7
ENST00000518165.5
ENST00000518582.5
ENST00000523159.5
ENST00000523601.5
ENST00000617590.1
CDS CCA 90 bp CCTGTTGAATATAACCGCAGATGCCAAGGGCCACAGCCGAGGAAGTaGAAAATCTGCACGGGCCCAGTAAGGCTCTATCTTAGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVEYNRRCQGPQPRK*KICTGPVRLYLREK
Trigger: CTTCTCTCTAAGATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATATTCAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS GCA 90 bp TATAACCGCAGATGCCAAGGGCCACAGCCGAGGAAGTGGAAAATCTaGACGGGCCCAGTAAGGCTCTATAAAGTCAAAGTCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: YNRRCQGPQPRKWKI*TGPVRLYKVKVSIL
Trigger: CAAGATGGAGACTTTGACTTTATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS GCA 90 bp TTTCATTCGAAAGCACATGTTCTTTGTAGGCTGCTGGATCGCAAGTaGAGTAGGAGAAAGCACAAGGGCGGTACATCAGAGGGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: FHSKAHVLCRLLDRK*SRRKHKGGTSEGSQ
Trigger: CTGGCTCCCCTCTGATGTACCGCCCTTGTGCTTTCTCCTACTGCACTTGCGATCCAGCAGCCTACAAAGAACATGTGCTTTCGAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS GCA 90 bp TGCTGGAGCAGGGCTTTCATTCGAAAGCACATGTTCTTTGTAGGCTaGTGGATCGCAAGTGCAGTAGGAGAAAGCACAAGGGCGGTACAT +
Preference number: 5 (lower is better)
Translates to: CWSRAFIRKHMFFVG*WIASAVGESTRAVH
Trigger: ATGTACCGCCCTTGTGCTTTCTCCTACTGCACTTGCGATCCAGCAGCCTACAAAGAACATGTGCTTTCGAATGAAAGCCCTGCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS CCA 90 bp CCTGTTGAATATAACCGCAGATGCCAAGGGCCACAGCCGAGGAAGTaGAAAATCTGCACGGGCCCAGTAAGGCTCTATAAAGTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: PVEYNRRCQGPQPRK*KICTGPVRLYKVKV
Trigger: GACTTTGACTTTATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATATTCAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS CCA 90 bp TGGAGCAGGGCTTTCATTCGAAAGCACATGTTCTTTGTAGGCTGCTaGATCGCAAGTGCAGTAGGAGAAAGCACAAGGGCGGTACATCAG +
Preference number: 5 (lower is better)
Translates to: WSRAFIRKHMFFVGC*IASAVGESTRAVHQ
Trigger: CTGATGTACCGCCCTTGTGCTTTCTCCTACTGCACTTGCGATCCAGCAGCCTACAAAGAACATGTGCTTTCGAATGAAAGCCCTGCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS CCA 90 bp ATGTGCAAATGGTCTTTATGGGAGAATTCTAGCACTGAGCAGTGGTaGCATCTGCAGGTGGCCTCGTCTGTGTATGCAGCAAAAGGGTGT +
Preference number: 5 (lower is better)
Translates to: MCKWSLWENSSTEQW*HLQVASSVYAAKGC
Trigger: ACACCCTTTTGCTGCATACACAGACGAGGCCACCTGCAGATGCCACCACTGCTCAGTGCTAGAATTCTCCCATAAAGACCATTTGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS CCA 90 bp TTGATGTGCAAATGGTCTTTATGGGAGAATTCTAGCACTGAGCAGTaGTGGCATCTGCAGGTGGCCTCGTCTGTGTATGCAGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: LMCKWSLWENSSTEQ*WHLQVASSVYAAKG
Trigger: CCCTTTTGCTGCATACACAGACGAGGCCACCTGCAGATGCCACCACTGCTCAGTGCTAGAATTCTCCCATAAAGACCATTTGCACATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS-3UTR CAA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTACTTCACTCATCGTGCTaGTGGCCCGCATGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVLHSSC*WPAWCP
Trigger: TGGGCACCATGCGGGCCACAAGCACGATGAGTGAAG...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGCTTCACTCATCGTGCTaGTGGCCCGCATGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKLHSSC*WPAWCP
Trigger: TGGGCACCATGCGGGCCACAAGCACGATGAGTGAAG...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATGGCCCAGACTCCATTTaGGAACTTCGCAGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHGPDSI*ELRRLA
Trigger: CGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCC...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS TCA 90 bp AGGTATCTTAGGTACTGTGGCAAACTGGAAAGAACATTCTTGTCTTaGGTTGGAGCTCCAGCTCATCCCCAACTGCCTGTTGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: RYLRYCGKLERTFLS*VGAPAHPQLPVVTG
Trigger: CCCTGTGACAACAGGCAGTTGGGGATGAGCTGGAGCTCCAACTCAAGACAAGAATGTTCTTTCCAGTTTGCCACAGTACCTAAGATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS GCA 90 bp AATGGTCTTTATGGGAGAATTCTAGCACTGAGCAGTGGTGGCATCTaGAGGTGGCCTCGTCTGTGTATGCAGCAAAAGGGTGTAGAAATC +
Preference number: 5 (lower is better)
Translates to: NGLYGRILALSSGGI*RWPRLCMQQKGVEI
Trigger: GATTTCTACACCCTTTTGCTGCATACACAGACGAGGCCACCTGCAGATGCCACCACTGCTCAGTGCTAGAATTCTCCCATAAAGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS-3UTR CAA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGCTTCACTCATCGTGCTaGTGGCCCGCATGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMLHSSC*WPAWCP
Trigger: TGGGCACCATGCGGGCCACAAGCACGATGAGTGAAG...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS TCA 90 bp GAGAGATCTCTCCATCCTTTTTCCAAATTCCTGAAGAAGGGACATTaGATGGCCTCCACAATCTCAGATTCAGCAGATTTGGAGGGGGTC +
Preference number: 5 (lower is better)
Translates to: ERSLHPFSKFLKKGH*MASTISDSADLEGV
Trigger: GACCCCCTCCAAATCTGCTGAATCTGAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAGGAATTTGGAAAAAGGATGGAGAGATCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000523601.5
ENST00000523960.1
CDS GCA 90 bp AAAGTGCCAGGTACAGAGCCCATGCTCAAAAATGAGGGTTCCCGTTaGCTTTTTCAGGAGTCCTTACCAGGTGTGGTTTATATAGTCTGT +
Preference number: 5 (lower is better)
Translates to: KVPGTEPMLKNEGSR*LFQESLPGVVYIVC
Trigger: ACAGACTATATAAACCACACCTGGTAAGGACTCCTGAAAAAGGCAACGGGAACCCTCATTTTTGAGCATGGGCTCTGTACCTGGCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS CCA 90 bp AAGGACAATAAACATCTAAAGGAACGCAACACCAAAACTGCTGCCTaGTCTGAGGAGGGACTGCAACCAGGCATTTCTTTACCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: KDNKHLKERNTKTAA*SEEGLQPGISLPVL
Trigger: CAAGACAGGTAAAGAAATGCCTGGTTGCAGTCCCTCCTCAGACCAGGCAGCAGTTTTGGTGTTGCGTTCCTTTAGATGTTTATTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS TCA 90 bp AAGGCCAGCTTGATTTGGGATGGTGATGGGTCTTTCTTTGTAAAGTaGGAAAAGGCCTATGGTAAGCACAAGCACGTTATCAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: KASLIWDGDGSFFVK*EKAYGKHKHVISKG
Trigger: ACCCTTGCTGATAACGTGCTTGTGCTTACCATAGGCCTTTTCTCACTTTACAAAGAAAGACCCATCACCATCCCAAATCAAGCTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 90 bp TGGTACCATAGAAGACATTCAGGTATCTTAGGTACTGTGGCAAACTaGAAAGAACATTCTTGTCTTGAGTTGGAGCTCCAGCTCATCCCC +
Preference number: 5 (lower is better)
Translates to: WYHRRHSGILGTVAN*KEHSCLELELQLIP
Trigger: GGGGATGAGCTGGAGCTCCAACTCAAGACAAGAATGTTCTTTCCAGTTTGCCACAGTACCTAAGATACCTGAATGTCTTCTATGGTACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS-3UTR CAA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGCCTGGGCATGTACCATaGTCACTTTTTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKPGHVP*SLFDLC
Trigger: GCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATTTCAGTCCCCAAGGCTaGTACCACTCAGTACAAATG +
Preference number: 5 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNFSPQG*YHSVQM
Trigger: CATTTGTACTGAGTGGTACAAGCCTTGGGGACTGAA...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTACCTGAAGAAGGGACATaGAATGGCCTCCACAATCTC +
Preference number: 5 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVPEEGT*NGLHNL
Trigger: GAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAGG...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS TCA 90 bp GCTCCAGCTCATCCCCAACTGCCTGTTGTCACAGGGAAGTCAGGCTaGATGTTACCAAATCTTCTGATTTTTAAAGAGGTACTGGAAATT +
Preference number: 5 (lower is better)
Translates to: APAHPQLPVVTGKSG*MLPNLLIFKEVLEI
Trigger: AATTTCCAGTACCTCTTTAAAAATCAGAAGATTTGGTAACATTCAGCCTGACTTCCCTGTGACAACAGGCAGTTGGGGATGAGCTGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS CCA 90 bp TCGCAGTGTATCTCTGACGAAGTTCTTCTATCTCCCGTTCCATCATaGGGTCCAGTGCTTTTAACCGCATCTGTAGTTCTTCTAAACTTA +
Preference number: 5 (lower is better)
Translates to: SQCISDEVLLSPVPS*GPVLLTASVVLLNL
Trigger: TAAGTTTAGAAGAACTACAGATGCGGTTAAAAGCACTGGACCCCATGATGGAACGGGAGATAGAAGAACTTCGTCAGAGATACACTGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGCCTGGGCATGTACCATaGTCACTTTTTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMPGHVP*SLFDLC
Trigger: GCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATTTCAGTCCCCAAGGCTaGTACCACTCAGTACAAATG +
Preference number: 5 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHFSPQG*YHSVQM
Trigger: CATTTGTACTGAGTGGTACAAGCCTTGGGGACTGAA...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGTTCTCGAGCAGCTCGTGGGGTaGGAAATTCTGCCTACCCCT +
Preference number: 5 (lower is better)
Translates to: FYYWYAADRTREYTSFVLEQLVG*EILPTP
Trigger: AGGGGTAGGCAGAATTTCCAACCCCACGAGCTGCTC...GAGAACAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000523601.5
CDS CCA 90 bp GGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCCAGCAACGGAACAAAGCT +
Preference number: 5 (lower is better)
Translates to: GEIIGPKFWLSECWW*ICGNHKNSQQRNKA
Trigger: AGCTTTGTTCCGTTGCTGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518582.5
CDS CCA 90 bp GGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCCTGAAGGCAAGACAGTGT +
Preference number: 5 (lower is better)
Translates to: GEIIGPKFWLSECWW*ICGNHKNSLKARQC
Trigger: ACACTGTCTTGCCTTCAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520653.1
ENST00000523159.5
CDS CCA 90 bp ATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCATAAAAATAGCCTGAAGGCAAGACAG +
Preference number: 5 (lower is better)
Translates to: IGEIIGPKFWLSECW*WICGNHKNSLKARQ
Trigger: CTGTCTTGCCTTCAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520653.1
ENST00000523159.5
CDS CCA 90 bp ATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCATAAAAATAGCCTGTCACATTGCTGC +
Preference number: 5 (lower is better)
Translates to: IGEIIGPKFWLSECW*WICGNHKNSLSHCC
Trigger: GCAGCAATGTGACAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CAA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATTTCAGTCCCCAAGGCTaGTACCACTCAGTACAAATG +
Preference number: 5 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHFSPQG*YHSVQM
Trigger: CATTTGTACTGAGTGGTACAAGCCTTGGGGACTGAA...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 90 bp ATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCATAAAAATAGCCAGCAACGGAACAAA +
Preference number: 5 (lower is better)
Translates to: IGEIIGPKFWLSECW*WICGNHKNSQQRNK
Trigger: TTTGTTCCGTTGCTGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518582.5
CDS CCA 90 bp AAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAATCATAAAAATAGCCAGCAACGGAAC +
Preference number: 5 (lower is better)
Translates to: KIGEIIGPKFWLSEC*WWICGNHKNSQQRN
Trigger: GTTCCGTTGCTGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518582.5
CDS CCA 90 bp GGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCCTGTCACATTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: GEIIGPKFWLSECWW*ICGNHKNSLSHCCI
Trigger: AATGCAGCAATGTGACAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CAA 90 bp CCTGGGCATGTACCATTGTCACTTTTTGACCTCTGCCTAATTGTAGGGCAAAATTATTGCGTTTTGCCATaGTATCTGTTAACTGACCAG +
Preference number: 5 (lower is better)
Translates to: PGHVPLSLFDLCLIVGQNYCVLP*YLLTDQ
Trigger: CTGGTCAGTTAACAGATACAATGGCAAAACGCAATA...ATTTTGCCCTACAATTAGGCAGAGGTCAAAAAGTGACAATGGTACATGCCCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000523601.5
CDS-3UTR CAA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATGTTATAGCCTATTTCTaGAATCACCTCAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHVIAYF*NHLRSH
Trigger: ATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAAC...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000523601.5
CDS-3UTR CAA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTCAGGAAAAACGTTTTaGGACATAGGGAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKSGKTF*DIGKGS
Trigger: TGAACCCTTCCCTATGTCCAAAAACGTTTTTCCTGA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp ACTGTCAAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATAAAGGCCTAGCCCATTaGAGAACTACTGCCATTATT +
Preference number: 5 (lower is better)
Translates to: TVKMAICSLGNDWSQCNHKGLAH*RTTAII
Trigger: AATAATGGCAGTAGTTCTCAAATGGGCTAGGCCTTT...ATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTTGACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 90 bp ATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCATAAAAATAGCCCTCATTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: IGEIIGPKFWLSECW*WICGNHKNSPHWMY
Trigger: ATACATCCAATGAGGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000523601.5
CDS CCA 90 bp AAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAATCATAAAAATAGCCCTCATTGGATG +
Preference number: 5 (lower is better)
Translates to: KIGEIIGPKFWLSEC*WWICGNHKNSPHWM
Trigger: CATCCAATGAGGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000523601.5
CDS CCA 90 bp AAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAATCATAAAAATAGCCTGAAGGCAAGA +
Preference number: 5 (lower is better)
Translates to: KIGEIIGPKFWLSEC*WWICGNHKNSLKAR
Trigger: TCTTGCCTTCAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520653.1
ENST00000523159.5
CDS CCA 90 bp AAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAATCATAAAAATAGCCTGTCACATTGC +
Preference number: 5 (lower is better)
Translates to: KIGEIIGPKFWLSEC*WWICGNHKNSLSHC
Trigger: GCAATGTGACAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CAA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTTTAATTGCGACAACTaGACCGGATTCCTTGTGTAT +
Preference number: 5 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKFNCDN*TGFLVY
Trigger: ATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp CAAGGAAGCAGGGAGGTCCTGAAATTGTGTACTCATATCCATTTTCAACTACTGTTTAATTGCGACAACTaGACCGGATTCCTTGTGTAT +
Preference number: 5 (lower is better)
Translates to: QGSREVLKLCTHIHFQLLFNCDN*TGFLVY
Trigger: ATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAA...CAGTAGTTGAAAATGGATATGAGTACACAATTTCAGGACCTCCCTGCTTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CAA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATTGCGTTTTGCCATaGTATCTGTTAACTGACCAG +
Preference number: 5 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKYCVLP*YLLTDQ
Trigger: CTGGTCAGTTAACAGATACAATGGCAAAACGCAATA...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000523601.5
CDS-3UTR CAA 90 bp CAAGGAAGCAGGGAGGTCCTGAAATTGTGTACTCATATCCATTTTCAACTACTGTATTGCGTTTTGCCATaGTATCTGTTAACTGACCAG +
Preference number: 5 (lower is better)
Translates to: QGSREVLKLCTHIHFQLLYCVLP*YLLTDQ
Trigger: CTGGTCAGTTAACAGATACAATGGCAAAACGCAATA...CAGTAGTTGAAAATGGATATGAGTACACAATTTCAGGACCTCCCTGCTTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CAA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATCATGTCTTTTAGCTTaGATCTCCATAGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVSCLLA*ISIASV
Trigger: CACAGAAGCTATGGAGATCAAAGCTAAAAGACATGA...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp AATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATAAATTGGTTGCACATTCAGGAAAAACGTTTTaGGACATAGGGAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: NQGMYPIAPCRKYKLVAHSGKTF*DIGKGS
Trigger: TGAACCCTTCCCTATGTCCAAAAACGTTTTTCCTGA...ATGTGCAACCAATTTATACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS GCA 90 bp TTTCATTCTTCCCAGAGGTTAAGAAATCCAGGTTTCAGAACACAATaGCTAGGCTTCTTTGTTGGAAGAGACATGGAAAAATTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: FHSSQRLRNPGFRTQ*LGFFVGRDMEKFLS
Trigger: TGAGAGGAATTTTTCCATGTCTCTTCCAACAAAGAAGCCTAGGCATTGTGTTCTGAAACCTGGATTTCTTAACCTCTGGGAAGAATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS-3UTR CAA 90 bp GCTTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGTTTAATTGCGACAACTaGACCGGATTCCTTGTGTAT +
Preference number: 5 (lower is better)
Translates to: ACTTQYKCFCYWVIIRNMFNCDN*TGFLVY
Trigger: ATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAA...CATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGGTTATAGCCTATTTCTaGAATCACCTCAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: CSLGNDWSQCNHINVHSAVIAYF*NHLRSH
Trigger: ATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAAC...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419617.7
ENST00000523601.5
CDS-3UTR CAA 90 bp ACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTACAGGTTTGGCATTCTaGATAAAAGGATGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: TKSVKSSDQSSGFLNVGGTGLAF*IKGCCK
Trigger: TTTACAGCATCCTTTTATCAAGAATGCCAAACCTGT...ACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CAA 90 bp TTGAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGATTCCTAGTGGTTTCTaGGTCTCCAGAATAGTTAAA +
Preference number: 5 (lower is better)
Translates to: LKNYPGNQGMYPIAPCRKIPSGF*VSRIVK
Trigger: TTTAACTATTCTGGAGACCAAGAAACCACTAGGAAT...CTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp GAAAAACTATCCTGGAAATCAAGGAATGTACCCCATAGCTCCCTGCAGAAAGTATCAGTACAAATGTTTTaGCTACTGGGTTATCATCAG +
Preference number: 5 (lower is better)
Translates to: EKLSWKSRNVPHSSLQKVSVQMF*LLGYHQ
Trigger: CTGATGATAACCCAGTAGCAAAAACATTTGTACTGA...TACTTTCTGCAGGGAGCTATGGGGTACATTCCTTGATTTCCAGGATAGTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 90 bp ATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTaGTGGATTTGTGGGAATCATAAAAATAGCCTAGTACAAATGAAA +
Preference number: 5 (lower is better)
Translates to: IGEIIGPKFWLSECW*WICGNHKNSLVQMK
Trigger: TTTCATTTGTACTAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520053.1
CDS CCA 90 bp AAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAATCATAAAAATAGCCTAGTACAAATG +
Preference number: 5 (lower is better)
Translates to: KIGEIIGPKFWLSEC*WWICGNHKNSLVQM
Trigger: CATTTGTACTAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520053.1
CDS-3UTR CAA 90 bp CTCAGGATTCTTCACCAAACACTTTTTAACAAAATCGGTGAAATCATCGGACCATTTAATTGCGACAACTaGACCGGATTCCTTGTGTAT +
Preference number: 5 (lower is better)
Translates to: LRILHQTLFNKIGEIIGPFNCDN*TGFLVY
Trigger: ATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAA...TGGTCCGATGATTTCACCGATTTTGTTAAAAAGTGTTTGGTGAAGAATCCTGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424861.6
ENST00000521649.5
CDS-3UTR CAA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCACAGGTTTGGCATTCTaGATAAAAGGATGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: PSVLYNATIALDFQGLETTGLAF*IKGCCK
Trigger: TTTACAGCATCCTTTTATCAAGAATGCCAAACCTGT...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp CCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTTCAAGGTTTAGAGACCATTCCTAGTGGTTTCTaGGTCTCCAGAATAGTTAAA +
Preference number: 5 (lower is better)
Translates to: PSVLYNATIALDFQGLETIPSGF*VSRIVK
Trigger: TTTAACTATTCTGGAGACCAAGAAACCACTAGGAAT...GGTCTCTAAACCTTGAAAATCCAAAGCTATTGTTGCATTGTACAGCACTGAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATAAAGGCCTAGCCCATTaGAGAACTACTGCCATTATT +
Preference number: 5 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDKGLAH*RTTAII
Trigger: AATAATGGCAGTAGTTCTCAAATGGGCTAGGCCTTT...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGAAAAGGCCTAGCCCATTaGAGAACTACTGCCATTATT +
Preference number: 5 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGKGLAH*RTTAII
Trigger: AATAATGGCAGTAGTTCTCAAATGGGCTAGGCCTTT...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS TCA 90 bp CCATTTCTAATGCTGGTTTTACTCTCAGAAATAAGGTTTTCTAAATaGGAGTTTCTAAGCCTTATCTGGGAACCACATCATCGTAGGAAC +
Preference number: 5 (lower is better)
Translates to: PFLMLVLLSEIRFSK*EFLSLIWEPHHRRN
Trigger: GTTCCTACGATGATGTGGTTCCCAGATAAGGCTTAGAAACTCTCATTTAGAAAACCTTATTTCTGAGAGTAAAACCAGCATTAGAAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 90 bp AAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTTaGTGGTGGATTTGTGGGAATCATAAAAATAGCCTGCAATATATT +
Preference number: 5 (lower is better)
Translates to: KIGEIIGPKFWLSEC*WWICGNHKNSLQYI
Trigger: AATATATTGCAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518627.5
CDS-3UTR CAA 90 bp GAATATTGTAACATAAAGCCCTTCAGTGCTGTACAATGCAACAATAGCTTTGGATTTAATTGCGACAACTaGACCGGATTCCTTGTGTAT +
Preference number: 5 (lower is better)
Translates to: EYCNIKPFSAVQCNNSFGFNCDN*TGFLVY
Trigger: ATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAA...TCCAAAGCTATTGTTGCATTGTACAGCACTGAAGGGCTTTATGTTACAATATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TTCTTCACCAAACACTTTTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTGTTATAGCCTATTTCTaGAATCACCTCAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: FFTKHFLTKSVKSSDQSSVIAYF*NHLRSH
Trigger: ATGGCTCCTGAGGTGATTCAAGAAATAGGCTATAAC...AGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAAAAGTGTTTGGTGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS-3UTR CAA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTCATGTCTTTTAGCTTaGATCTCCATAGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDSCLLA*ISIASV
Trigger: CACAGAAGCTATGGAGATCAAAGCTAAAAGACATGA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp AAGATGGCCATATGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATTCATGTCTTTTAGCTTaGATCTCCATAGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: KMAICSLGNDWSQCNHINSCLLA*ISIASV
Trigger: CACAGAAGCTATGGAGATCAAAGCTAAAAGACATGA...ATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACATATGGCCATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TGTAGCTTAGGAAATGACTGGTCCCAATGCAATCATATAAATGTTCATTCAGCGTCAGTACAAATGTTTTaGCTACTGGGTTATCATCAG +
Preference number: 5 (lower is better)
Translates to: CSLGNDWSQCNHINVHSASVQMF*LLGYHQ
Trigger: CTGATGATAACCCAGTAGCAAAAACATTTGTACTGA...CGCTGAATGAACATTTATATGATTGCATTGGGACCAGTCATTTCCTAAGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp CTTTTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTGGCTTTCTGAATGTCAAGGCATTACCTCATaGGATGTATATCAGCATAAG +
Preference number: 5 (lower is better)
Translates to: LFNKIGEIIGPKFWLSECQGITS*DVYQHK
Trigger: CTTATGCTGATATACATCCAATGAGGTAATGCCTTG...ACATTCAGAAAGCCAGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424861.6
CDS TCA 90 bp AACTTCAGTTCATTGCTGGTAGGAATGCAAATGATACAGCCAGTGTaGAAGTCGGTTTGGCAGTATTTTACAAAACTAAACATACTCTTA +
Preference number: 5 (lower is better)
Translates to: NFSSLLVGMQMIQPV*KSVWQYFTKLNILL
Trigger: TAAGAGTATGTTTAGTTTTGTAAAATACTGCCAAACCGACTTTCACACTGGCTGTATCATTTGCATTCCTACCAGCAATGAACTGAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS-3UTR CAA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATACAGGTTTGGCATTCTaGATAAAAGGATGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDTGLAF*IKGCCK
Trigger: TTTACAGCATCCTTTTATCAAGAATGCCAAACCTGT...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TTCTTCACCAAACACTTTTTAACAAAATCGGTGAAATCATCGGACCAAAGTTCTTCATGTCTTTTAGCTTaGATCTCCATAGCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: FFTKHFLTKSVKSSDQSSSCLLA*ISIASV
Trigger: CACAGAAGCTATGGAGATCAAAGCTAAAAGACATGA...AGAACTTTGGTCCGATGATTTCACCGATTTTGTTAAAAAGTGTTTGGTGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521649.5
CDS-3UTR CAA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATATTCCTAGTGGTTTCTaGGTCTCCAGAATAGTTAAA +
Preference number: 5 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDIPSGF*VSRIVK
Trigger: TTTAACTATTCTGGAGACCAAGAAACCACTAGGAAT...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp TTGTACCACTCAGTACAAATGTTTTTGCTACTGGGTTATCATCAGGAACATGATTCAGTACAAATGTTTTaGCTACTGGGTTATCATCAG +
Preference number: 5 (lower is better)
Translates to: LYHSVQMFLLLGYHQEHDSVQMF*LLGYHQ
Trigger: CTGATGATAACCCAGTAGCAAAAACATTTGTACTGA...ATCATGTTCCTGATGATAACCCAGTAGCAAAAACATTTGTACTGAGTGGTACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS-3UTR CAA 90 bp AACAGTTTTATTACTGGTATGCAGCTGACAGAACAAGAGAATACACTTCTTTTGACAGGTTTGGCATTCTaGATAAAAGGATGCTGTAAA +
Preference number: 5 (lower is better)
Translates to: NSFITGMQLTEQENTLLLTGLAF*IKGCCK
Trigger: TTTACAGCATCCTTTTATCAAGAATGCCAAACCTGT...CAAAAGAAGTGTATTCTCTTGTTCTGTCAGCTGCATACCAGTAATAAAACTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 72 bp GCTCCATGGCGGCCGGGGACAGAGAGAGGGACCTGGTaGACGGCGAAGGCCGAAAGGAGGAAAGGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: APWRPGTERGTW*TAKAERRKGAG
Trigger: CCCGGCTCCTTTCCTCCTTTCGGCCTTCGCCGTCCACCAGGTCCCTCTCTCTGTCCCCGGCCGCCATGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000419617.7
ENST00000424861.6
ENST00000518165.5
ENST00000521649.5
ENST00000617590.1
CDS CCA 72 bp CGTGCCCAGAACGCCGGCGTGGCCCAGACTCCATTTTaGAACTTCGCAGGCTGGCGTGGACGAAGTAAACAC +
Preference number: 6 (lower is better)
Translates to: RAQNAGVAQTPF*NFAGWRGRSKH
Trigger: GTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519420.1
ENST00000523601.5
ENST00000523960.1
CDS CCA 72 bp TTTCAAGAGACCGTAGTCGTGCCCAGAACGCCGGCGTaGCCCAGACTCCATTTTGGAACTTCGCAGGCTGGC +
Preference number: 6 (lower is better)
Translates to: FQETVVVPRTPA*PRLHFGTSQAG
Trigger: GCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCCGGCGTTCTGGGCACGACTACGGTCTCTTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519420.1
ENST00000523601.5
ENST00000523960.1
CDS TCA 72 bp GCGAAGCGTAGGAACGCTCTTCAGGTCACCACCCCGTaGGTGGGAGGCTTGGGGAGTCTGAAGGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: AKRRNALQVTTP*VGGLGSLKEEK
Trigger: TTTCTCTTCCTTCAGACTCCCCAAGCCTCCCACTCACGGGGTGGTGACCTGAAGAGCGTTCCTACGCTTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519420.1
CDS CAA 90 bp CTGAGGAAGGACGCACAGCACTGCTCTCCAACCTCACCACAGTCTTaGCGTTCCATCAAGTGGGGTGTAGCTCAGCTCCTCCCCTTTAGC +
Preference number: 6 (lower is better)
Translates to: LRKDAQHCSPTSPQS*RSIKWGVAQLLPFS
Trigger: GCTAAAGGGGAGGAGCTGAGCTACACCCCACTTGATGGAACGCAAAGACTGTGGTGAGGTTGGAGAGCAGTGCTGTGCGTCCTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS TCA 72 bp CACCCAACGTACACATACTTAAGGGCGGGAAAGGTGTaGAGCCCGCTGCTGGGGAGTTGCCTCCCCTTTGAT +
Preference number: 6 (lower is better)
Translates to: HPTYTYLRAGKV*SPLLGSCLPFD
Trigger: ATCAAAGGGGAGGCAACTCCCCAGCAGCGGGCTTCACACCTTTCCCGCCCTTAAGTATGTGTACGTTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519420.1
ENST00000523960.1
CDS GCA 72 bp CCGCACTCGTTAAGGCTGAGGAAGGACGCACAGCACTaGTCTCCAACCTCACCACAGTCTTTGCGTTCCATC +
Preference number: 6 (lower is better)
Translates to: PHSLRLRKDAQH*SPTSPQSLRSI
Trigger: GATGGAACGCAAAGACTGTGGTGAGGTTGGAGAGCAGTGCTGTGCGTCCTTCCTCAGCCTTAACGAGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS CAA 72 bp GACGCACAGCACTGCTCTCCAACCTCACCACAGTCTTaGCGTTCCATCAAGTGGGGTGTAGCTCAGCTCCTC +
Preference number: 6 (lower is better)
Translates to: DAQHCSPTSPQS*RSIKWGVAQLL
Trigger: GAGGAGCTGAGCTACACCCCACTTGATGGAACGCAAAGACTGTGGTGAGGTTGGAGAGCAGTGCTGTGCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS TCA 72 bp GGAGAATCGCTTGAACCTAGGAGGTGGTGGTTGCAGTaGGCCAAAATTGCACCACTGCCCTCTACCCTCGGT +
Preference number: 6 (lower is better)
Translates to: GESLEPRRWWLQ*AKIAPLPSTLG
Trigger: ACCGAGGGTAGAGGGCAGTGGTGCAATTTTGGCTCACTGCAACCACCACCTCCTAGGTTCAAGCGATTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS GCA 72 bp GCCACCGTTGGTGCTCCTGTTGAATATAACCGCAGATaGCAAGGGCCACAGCCGAGGAAGTGGAAAATCTGC +
Preference number: 6 (lower is better)
Translates to: ATVGAPVEYNRR*QGPQPRKWKIC
Trigger: GCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATATTCAACAGGAGCACCAACGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS CAA 90 bp TTAGCCACCATCCTAGTGACTTCTTGGCCACCGTTGGTGCTCCTGTaGAATATAACCGCAGATGCCAAGGGCCACAGCCGAGGAAGTGGA +
Preference number: 6 (lower is better)
Translates to: LATILVTSWPPLVLL*NITADAKGHSRGSG
Trigger: TCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATATTCAACAGGAGCACCAACGGTGGCCAAGAAGTCACTAGGATGGTGGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS GCA 72 bp AGATGCCAAGGGCCACAGCCGAGGAAGTGGAAAATCTaGACGGGCCCAGTAAGGCTCTATCTTAGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: RCQGPQPRKWKI*TGPVRLYLREK
Trigger: CTTCTCTCTAAGATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS CCA 72 bp TATAACCGCAGATGCCAAGGGCCACAGCCGAGGAAGTaGAAAATCTGCACGGGCCCAGTAAGGCTCTATCTT +
Preference number: 6 (lower is better)
Translates to: YNRRCQGPQPRK*KICTGPVRLYL
Trigger: AAGATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS CAA 72 bp ATCCTAGTGACTTCTTGGCCACCGTTGGTGCTCCTGTaGAATATAACCGCAGATGCCAAGGGCCACAGCCGA +
Preference number: 6 (lower is better)
Translates to: ILVTSWPPLVLL*NITADAKGHSR
Trigger: TCGGCTGTGGCCCTTGGCATCTGCGGTTATATTCAACAGGAGCACCAACGGTGGCCAAGAAGTCACTAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS TCA 72 bp GGTCAGTTGTTCCTGGAGTTGTGGGGGAGAGATGGATaGACAGGTGGAGCACAGGAGCATTTCAGAGCAGTA +
Preference number: 6 (lower is better)
Translates to: GQLFLELWGRDG*TGGAQEHFRAV
Trigger: TACTGCTCTGAAATGCTCCTGTGCTCCACCTGTTCATCCATCTCTCCCCCACAACTCCAGGAACAACTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS GCA 72 bp AGATGCCAAGGGCCACAGCCGAGGAAGTGGAAAATCTaGACGGGCCCAGTAAGGCTCTATAAAGTCAAAGTC +
Preference number: 6 (lower is better)
Translates to: RCQGPQPRKWKI*TGPVRLYKVKV
Trigger: GACTTTGACTTTATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS CCA 72 bp TATAACCGCAGATGCCAAGGGCCACAGCCGAGGAAGTaGAAAATCTGCACGGGCCCAGTAAGGCTCTATAAA +
Preference number: 6 (lower is better)
Translates to: YNRRCQGPQPRK*KICTGPVRLYK
Trigger: TTTATAGAGCCTTACTGGGCCCGTGCAGATTTTCCACTTCCTCGGCTGTGGCCCTTGGCATCTGCGGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS TCA 72 bp GAATCCACAGATGCTGAACCCACGGATACGGATGGCTaGCCACGGTTGTTACTCTTTCACTTCGAGGCATCA +
Preference number: 6 (lower is better)
Translates to: ESTDAEPTDTDG*PRLLLFHFEAS
Trigger: TGATGCCTCGAAGTGAAAGAGTAACAACCGTGGTCAGCCATCCGTATCCGTGGGTTCAGCATCTGTGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp GATTCCAACATCGTGCTATTATGTTCAATCATGGTCTaGGCCCCTTCACTCATCGTGCTTGTGGCCCGCATG +
Preference number: 6 (lower is better)
Translates to: DSNIVLLCSIMV*APSLIVLVARM
Trigger: CATGCGGGCCACAAGCACGATGAGTGAAGGGGCCCAGACCATGATTGAACATAATAGCACGATGTTGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419617.7
ENST00000518582.5
ENST00000520440.1
ENST00000523159.5
ENST00000523601.5
ENST00000617590.1
CDS CCA 72 bp CCTCAACCAAAACACTTCCCAGATGCTTCCAGGACCTaGCAAGTCTTCAGTCACAAAGCTAGGGATAGTCCC +
Preference number: 6 (lower is better)
Translates to: PQPKHFPDASRT*QVFSHKARDSP
Trigger: GGGACTATCCCTAGCTTTGTGACTGAAGACTTGCCAGGTCCTGGAAGCATCTGGGAAGTGTTTTGGTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS CCA 72 bp GGCGTGGCCCAGACTCCATTTTGGAACTTCGCAGGCTaGCGTGGACGAAGTAAACACATTTATGGAAAAACC +
Preference number: 6 (lower is better)
Translates to: GVAQTPFWNFAG*RGRSKHIYGKT
Trigger: GGTTTTTCCATAAATGTGTTTACTTCGTCCACGCCAGCCTGCGAAGTTCCAAAATGGAGTCTGGGCCACGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519420.1
ENST00000523601.5
ENST00000523960.1
CDS CCA 72 bp AAAAGGTCAGTTGTTCCTGGAGTTGTGGGGGAGAGATaGATGAACAGGTGGAGCACAGGAGCATTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: KRSVVPGVVGER*MNRWSTGAFQS
Trigger: GCTCTGAAATGCTCCTGTGCTCCACCTGTTCATCCATCTCTCCCCCACAACTCCAGGAACAACTGACCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 72 bp CCTTTAGCCACCATCCTAGTGACTTCTTGGCCACCGTaGGTGCTCCTGTTGAATATAACCGCAGATGCCAAG +
Preference number: 6 (lower is better)
Translates to: PLATILVTSWPP*VLLLNITADAK
Trigger: CTTGGCATCTGCGGTTATATTCAACAGGAGCACCAACGGTGGCCAAGAAGTCACTAGGATGGTGGCTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517832.1
ENST00000649151.1
CDS CAA 72 bp CTTGAGTTGGAGCTCCAGCTCATCCCCAACTGCCTGTaGTCACAGGGAAGTCAGGCTGAATGTTACCAAATC +
Preference number: 6 (lower is better)
Translates to: LELELQLIPNCL*SQGSQAECYQI
Trigger: GATTTGGTAACATTCAGCCTGACTTCCCTGTGACAACAGGCAGTTGGGGATGAGCTGGAGCTCCAACTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS TCA 72 bp TCTAAAGGAACGCAACACCAAAACTGCTGCCTGGTCTaGGGAGGGACTGCAACCAGGCATTTCTTTACCTGT +
Preference number: 6 (lower is better)
Translates to: SKGTQHQNCCLV*GGTATRHFFTC
Trigger: ACAGGTAAAGAAATGCCTGGTTGCAGTCCCTCCTCAGACCAGGCAGCAGTTTTGGTGTTGCGTTCCTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS GCA 72 bp AAAGCACATGTTCTTTGTAGGCTGCTGGATCGCAAGTaGAGTAGGAGAAAGCACAAGGGCGGTACATCAGAG +
Preference number: 6 (lower is better)
Translates to: KAHVLCRLLDRK*SRRKHKGGTSE
Trigger: CTCTGATGTACCGCCCTTGTGCTTTCTCCTACTGCACTTGCGATCCAGCAGCCTACAAAGAACATGTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS GCA 72 bp GCAACACCAAAACTGCTGCCTGGTCTGAGGAGGGACTaGAACCAGGCATTTCTTTACCTGTCTTGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: ATPKLLPGLRRD*NQAFLYLSCLF
Trigger: AAACAAGCAAGACAGGTAAAGAAATGCCTGGTTGCAGTCCCTCCTCAGACCAGGCAGCAGTTTTGGTGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp GCTTTCATTCGAAAGCACATGTTCTTTGTAGGCTGCTaGATCGCAAGTGCAGTAGGAGAAAGCACAAGGGCG +
Preference number: 6 (lower is better)
Translates to: AFIRKHMFFVGC*IASAVGESTRA
Trigger: CGCCCTTGTGCTTTCTCCTACTGCACTTGCGATCCAGCAGCCTACAAAGAACATGTGCTTTCGAATGAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS CCA 72 bp AAATGGTCTTTATGGGAGAATTCTAGCACTGAGCAGTaGTGGCATCTGCAGGTGGCCTCGTCTGTGTATGCA +
Preference number: 6 (lower is better)
Translates to: KWSLWENSSTEQ*WHLQVASSVYA
Trigger: TGCATACACAGACGAGGCCACCTGCAGATGCCACCACTGCTCAGTGCTAGAATTCTCCCATAAAGACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS GCA 72 bp TTATCACCATGGTCCCCAAGTCGGATTCCAACATCGTaGTATTATGTTCAATCATGGTCTGGGCCCCTTCAC +
Preference number: 6 (lower is better)
Translates to: LSPWSPSRIPTS*YYVQSWSGPLH
Trigger: GTGAAGGGGCCCAGACCATGATTGAACATAATAGCACGATGTTGGAATCCGACTTGGGGACCATGGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000419617.7
ENST00000518582.5
ENST00000520440.1
ENST00000523159.5
ENST00000523601.5
ENST00000617590.1
CDS GCA 72 bp AGGGCTTTCATTCGAAAGCACATGTTCTTTGTAGGCTaGTGGATCGCAAGTGCAGTAGGAGAAAGCACAAGG +
Preference number: 6 (lower is better)
Translates to: RAFIRKHMFFVG*WIASAVGESTR
Trigger: CCTTGTGCTTTCTCCTACTGCACTTGCGATCCAGCAGCCTACAAAGAACATGTGCTTTCGAATGAAAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518704.1
ENST00000649151.1
CDS GCA 72 bp GGTACAGAGCCCATGCTCAAAAATGAGGGTTCCCGTTaGCTTTTTCAGGAGTCCTTACCAGGTGTGGTTTAT +
Preference number: 6 (lower is better)
Translates to: GTEPMLKNEGSR*LFQESLPGVVY
Trigger: ATAAACCACACCTGGTAAGGACTCCTGAAAAAGGCAACGGGAACCCTCATTTTTGAGCATGGGCTCTGTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649151.1
CDS CCA 72 bp GTGCCCACACTCTCCACACTAGTCTTCACCATGGTGTaGGAATCCAGCTCATCTTCATCCGAATTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: VPTLSTLVFTMV*ESSSSSSEFSS
Trigger: AGAAGAAAATTCGGATGAAGATGAGCTGGATTCCCACACCATGGTGAAGACTAGTGTGGAGAGTGTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000419617.7
ENST00000518165.5
ENST00000518582.5
ENST00000523159.5
ENST00000523601.5
ENST00000617590.1
CDS CAA 72 bp ACTGTGGCAAACTGGAAAGAACATTCTTGTCTTGAGTaGGAGCTCCAGCTCATCCCCAACTGCCTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: TVANWKEHSCLE*ELQLIPNCLLS
Trigger: TGACAACAGGCAGTTGGGGATGAGCTGGAGCTCCAACTCAAGACAAGAATGTTCTTTCCAGTTTGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS CAA 90 bp ATCTTAGGTACTGTGGCAAACTGGAAAGAACATTCTTGTCTTGAGTaGGAGCTCCAGCTCATCCCCAACTGCCTGTTGTCACAGGGAAGT +
Preference number: 6 (lower is better)
Translates to: ILGTVANWKEHSCLE*ELQLIPNCLLSQGS
Trigger: ACTTCCCTGTGACAACAGGCAGTTGGGGATGAGCTGGAGCTCCAACTCAAGACAAGAATGTTCTTTCCAGTTTGCCACAGTACCTAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS GCA 72 bp TCAGATTCAGCAGATTTGGAGGGGGTCCGAAGAATATaGGTTTCTAGCAAGTTCCACCGGTTCTGGATTACA +
Preference number: 6 (lower is better)
Translates to: SDSADLEGVRRI*VSSKFHRFWIT
Trigger: TGTAATCCAGAACCGGTGGAACTTGCTAGAAACGCATATTCTTCGGACCCCCTCCAAATCTGCTGAATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523601.5
ENST00000523960.1
CDS GCA 72 bp CCACCGCGCCCGGCCATAAATTGGTGTATTTGTGTATaGACACTTGGATACCAAAATCCACGGATATTGAAG +
Preference number: 6 (lower is better)
Translates to: PPRPAINWCICV*TLGYQNPRILK
Trigger: CTTCAATATCCGTGGATTTTGGTATCCAAGTGTGCATACACAAATACACCAATTTATGGCCGGGCGCGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp GCTGCCTTCTTTTCTTTGCATCCATCGCATCCAGAATaGGCTGTCTTTTCGCAGTGTATCTCTGACGAAGTT +
Preference number: 6 (lower is better)
Translates to: AAFFSLHPSHPE*AVFSQCISDEV
Trigger: AACTTCGTCAGAGATACACTGCGAAAAGACAGCCCATTCTGGATGCGATGGATGCAAAGAAAAGAAGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 72 bp AAACATCTAAAGGAACGCAACACCAAAACTGCTGCCTaGTCTGAGGAGGGACTGCAACCAGGCATTTCTTTA +
Preference number: 6 (lower is better)
Translates to: KHLKERNTKTAA*SEEGLQPGISL
Trigger: TAAAGAAATGCCTGGTTGCAGTCCCTCCTCAGACCAGGCAGCAGTTTTGGTGTTGCGTTCCTTTAGATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp ATCTCTGACGAAGTTCTTCTATCTCCCGTTCCATCATaGGGTCCAGTGCTTTTAACCGCATCTGTAGTTCTT +
Preference number: 6 (lower is better)
Translates to: ISDEVLLSPVPS*GPVLLTASVVL
Trigger: AAGAACTACAGATGCGGTTAAAAGCACTGGACCCCATGATGGAACGGGAGATAGAAGAACTTCGTCAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419617.7
ENST00000523601.5
ENST00000617590.1
CDS CCA 72 bp ACAATTTGGCTCAAGCTCAAGCAATTCTGTGTCCTGTaGAACTCACAAGGCTTTCCAAGGCTTCTGCTGATT +
Preference number: 6 (lower is better)
Translates to: TIWLKLKQFCVL*NSQGFPRLLLI
Trigger: AATCAGCAGAAGCCTTGGAAAGCCTTGTGAGTTCCACAGGACACAGAATTGCTTGAGCTTGAGCCAAATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517832.1
CDS CCA 72 bp ATTGAATGGCCTCCACAATCTCAGATTCAGCAGATTTaGAGGGGGTCCGAAGAATATGCGTTTCTAGCAAGT +
Preference number: 6 (lower is better)
Translates to: IEWPPQSQIQQI*RGSEEYAFLAS
Trigger: ACTTGCTAGAAACGCATATTCTTCGGACCCCCTCCAAATCTGCTGAATCTGAGATTGTGGAGGCCATTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523601.5
ENST00000523960.1
CDS CCA 72 bp TGCCTCCAGGCAAGTCTGATGATTAACCATCCAGTTTaGAAACCACCCAACAATGTACATTCATTGGGGCTT +
Preference number: 6 (lower is better)
Translates to: CLQASLMINHPV*KPPNNVHSLGL
Trigger: AAGCCCCAATGAATGTACATTGTTGGGTGGTTTCCAAACTGGATGGTTAATCATCAGACTTGCCTGGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 72 bp ACGGAACAAAGCTGGACGGAGAATGACTTTGACGAGTaGAGAGAAGAAGGCTTCAGACGATCAAACTACTCT +
Preference number: 6 (lower is better)
Translates to: TEQSWTENDFDE*REEGFRRSNYS
Trigger: AGAGTAGTTTGATCGTCTGAAGCCTTCTTCTCTCAACTCGTCAAAGTCATTCTCCGTCCAGCTTTGTTCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518582.5
CDS CAA 72 bp TTTGGTGTCCTAGGAGTTCTCATACCCAAGGCCAGCTaGATTTGGGATGGTGATGGGTCTTTCTTTGTAAAG +
Preference number: 6 (lower is better)
Translates to: FGVLGVLIPKAS*IWDGDGSFFVK
Trigger: CTTTACAAAGAAAGACCCATCACCATCCCAAATCAAGCTGGCCTTGGGTATGAGAACTCCTAGGACACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS TCA 72 bp AGTTCTCATACCCAAGGCCAGCTTGATTTGGGATGGTaGTGGGTCTTTCTTTGTAAAGTGAGAAAAGGCCTA +
Preference number: 6 (lower is better)
Translates to: SSHTQGQLDLGW*WVFLCKVRKGL
Trigger: TAGGCCTTTTCTCACTTTACAAAGAAAGACCCATCACCATCCCAAATCAAGCTGGCCTTGGGTATGAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp ATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCCAGCAACGG +
Preference number: 6 (lower is better)
Translates to: IGPKFWLSECWW*ICGNHKNSQQR
Trigger: CCGTTGCTGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000518582.5
CDS TCA 72 bp CTCCATCCTTTTTCCAAATTCCTGAAGAAGGGACATTaGATGGCCTCCACAATCTCAGATTCAGCAGATTTG +
Preference number: 6 (lower is better)
Translates to: LHPFSKFLKKGH*MASTISDSADL
Trigger: CAAATCTGCTGAATCTGAGATTGTGGAGGCCATTCAATGTCCCTTCTTCAGGAATTTGGAAAAAGGATGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000523601.5
ENST00000523960.1
CDS TCA 72 bp CATCCCCAACTGCCTGTTGTCACAGGGAAGTCAGGCTaGATGTTACCAAATCTTCTGATTTTTAAAGAGGTA +
Preference number: 6 (lower is better)
Translates to: HPQLPVVTGKSG*MLPNLLIFKEV
Trigger: TACCTCTTTAAAAATCAGAAGATTTGGTAACATTCAGCCTGACTTCCCTGTGACAACAGGCAGTTGGGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS CCA 72 bp ATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCCTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: IGPKFWLSECWW*ICGNHKNSLKA
Trigger: TGCCTTCAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000520653.1
ENST00000523159.5
CDS CCA 72 bp AGAAGACATTCAGGTATCTTAGGTACTGTGGCAAACTaGAAAGAACATTCTTGTCTTGAGTTGGAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RRHSGILGTVAN*KEHSCLELELQ
Trigger: CTGGAGCTCCAACTCAAGACAAGAATGTTCTTTCCAGTTTGCCACAGTACCTAAGATACCTGAATGTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS CAA 90 bp ACCATCCAGTTTGGAAACCACCCAACAATGTACATTCATTGGGGCTaGATGAGGTCACTCTCCACCATTCATCACATTACTTATGGATTA +
Preference number: 6 (lower is better)
Translates to: TIQFGNHPTMYIHWG*MRSLSTIHHITYGL
Trigger: TAATCCATAAGTAATGTGATGAATGGTGGAGAGTGACCTCATCAAGCCCCAATGAATGTACATTGTTGGGTGGTTTCCAAACTGGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 90 bp GCACAGGAGCATTTCAGAGCAGTAAAACTCTTCTGTCCGATACTGTaGTGGTGGGTATATGTCATTAGACATTTGTCCAAACCCATAGAA +
Preference number: 6 (lower is better)
Translates to: AQEHFRAVKLFCPIL*WWVYVIRHLSKPIE
Trigger: TTCTATGGGTTTGGACAAATGTCTAATGACATATACCCACCACAACAGTATCGGACAGAAGAGTTTTACTGCTCTGAAATGCTCCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS TCA 72 bp TTGATTTGGGATGGTGATGGGTCTTTCTTTGTAAAGTaGGAAAAGGCCTATGGTAAGCACAAGCACGTTATC +
Preference number: 6 (lower is better)
Translates to: LIWDGDGSFFVK*EKAYGKHKHVI
Trigger: GATAACGTGCTTGTGCTTACCATAGGCCTTTTCTCACTTTACAAAGAAAGACCCATCACCATCCCAAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS GCA 72 bp TCCCAGAGGTTAAGAAATCCAGGTTTCAGAACACAATaGCTAGGCTTCTTTGTTGGAAGAGACATGGAAAAA +
Preference number: 6 (lower is better)
Translates to: SQRLRNPGFRTQ*LGFFVGRDMEK
Trigger: TTTTTCCATGTCTCTTCCAACAAAGAAGCCTAGGCATTGTGTTCTGAAACCTGGATTTCTTAACCTCTGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523567.1
CDS CCA 72 bp TTCAGAGCAGTAAAACTCTTCTGTCCGATACTGTTGTaGTGGGTATATGTCATTAGACATTTGTCCAAACCC +
Preference number: 6 (lower is better)
Translates to: FRAVKLFCPILL*WVYVIRHLSKP
Trigger: GGGTTTGGACAAATGTCTAATGACATATACCCACCACAACAGTATCGGACAGAAGAGTTTTACTGCTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp CCCGGCCATAAATTGGTGTATTTGTGTATGCACACTTaGATACCAAAATCCACGGATATTGAAGTCCCTAAT +
Preference number: 6 (lower is better)
Translates to: PGHKLVYLCMHT*IPKSTDIEVPN
Trigger: ATTAGGGACTTCAATATCCGTGGATTTTGGTATCCAAGTGTGCATACACAAATACACCAATTTATGGCCGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CCA 72 bp ATCGGACCAAAGTTCTGGCTTTCTGAATGTTGGTGGTaGATTTGTGGGAATCATAAAAATAGCCTAGTACAA +
Preference number: 6 (lower is better)
Translates to: IGPKFWLSECWW*ICGNHKNSLVQ
Trigger: TTGTACTAGGCTATTTTTATGATTCCCACAAATCCACCACCAACATTCAGAAAGCCAGAACTTTGGTCCGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520053.1
CDS CCA 72 bp AGAGCAGTAAAACTCTTCTGTCCGATACTGTTGTGGTaGGTATATGTCATTAGACATTTGTCCAAACCCATA +
Preference number: 6 (lower is better)
Translates to: RAVKLFCPILLW*VYVIRHLSKPI
Trigger: TATGGGTTTGGACAAATGTCTAATGACATATACCCACCACAACAGTATCGGACAGAAGAGTTTTACTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 90 bp CTCTTCTGTCCGATACTGTTGTGGTGGGTATATGTCATTAGACATTaGTCCAAACCCATAGAATGTACCACACAAAGAATTAACCCTAAT +
Preference number: 6 (lower is better)
Translates to: LFCPILLWWVYVIRH*SKPIECTTQRINPN
Trigger: ATTAGGGTTAATTCTTTGTGTGGTACATTCTATGGGTTTGGACAAATGTCTAATGACATATACCCACCACAACAGTATCGGACAGAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS TCA 72 bp TCATTGCTGGTAGGAATGCAAATGATACAGCCAGTGTaGAAGTCGGTTTGGCAGTATTTTACAAAACTAAAC +
Preference number: 6 (lower is better)
Translates to: SLLVGMQMIQPV*KSVWQYFTKLN
Trigger: GTTTAGTTTTGTAAAATACTGCCAAACCGACTTTCACACTGGCTGTATCATTTGCATTCCTACCAGCAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 72 bp CCGATACTGTTGTGGTGGGTATATGTCATTAGACATTaGTCCAAACCCATAGAATGTACCACACAAAGAATT +
Preference number: 6 (lower is better)
Translates to: PILLWWVYVIRH*SKPIECTTQRI
Trigger: AATTCTTTGTGTGGTACATTCTATGGGTTTGGACAAATGTCTAATGACATATACCCACCACAACAGTATCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 72 bp CATTTCAGAGCAGTAAAACTCTTCTGTCCGATACTGTaGTGGTGGGTATATGTCATTAGACATTTGTCCAAA +
Preference number: 6 (lower is better)
Translates to: HFRAVKLFCPIL*WWVYVIRHLSK
Trigger: TTTGGACAAATGTCTAATGACATATACCCACCACAACAGTATCGGACAGAAGAGTTTTACTGCTCTGAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 90 bp TTAATCATCAGGGAAATGTTGGGAGGGGGAGAAACAAGAAGAGATTaGGGAACTCTGTACTTTTCACTCATTTGTTCTGTAAACCTAAAA +
Preference number: 6 (lower is better)
Translates to: LIIREMLGGGETRRD*GTLYFSLICSVNLK
Trigger: TTTTAGGTTTACAGAACAAATGAGTGAAAAGTACAGAGTTCCCAAATCTCTTCTTGTTTCTCCCCCTCCCAACATTTCCCTGATGATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 90 bp GCTTCTGTGATCAGGTCTCTTAATATTGATACAGGTTTGGCATTCTaGATAAAAGGATGCTTTTCTGGAGGCCAGTTTCTTGCTTATTTT +
Preference number: 6 (lower is better)
Translates to: ASVIRSLNIDTGLAF*IKGCFSGGQFLAYF
Trigger: AAAATAAGCAAGAAACTGGCCTCCAGAAAAGCATCCTTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGATCACAGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522924.1
CDS CAA 72 bp ATCAGGTCTCTTAATATTGATACAGGTTTGGCATTCTaGATAAAAGGATGCTTTTCTGGAGGCCAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: IRSLNIDTGLAF*IKGCFSGGQFL
Trigger: AAGAAACTGGCCTCCAGAAAAGCATCCTTTTATCAAGAATGCCAAACCTGTATCAATATTAAGAGACCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522924.1
CDS CAA 90 bp ATGCATGTTCTGATTACAGTTTTCGTGACTCTTATTCTTGAAGTCTaGCTTATCAAAGTAGTCCATGAAAGATGGTCTTTGTACTTGTGG +
Preference number: 6 (lower is better)
Translates to: MHVLITVFVTLILEV*LIKVVHERWSLYLW
Trigger: CCACAAGTACAAAGACCATCTTTCATGGACTACTTTGATAAGCAAGACTTCAAGAATAAGAGTCACGAAAACTGTAATCAGAACATGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000419617.7
ENST00000517832.1
ENST00000520440.1
ENST00000523601.5
ENST00000617590.1
CDS CAA 90 bp AAAAATAGCCTGAAGGCAAGACAGTGTCTTCTATTGTCTGAATGTTaGTGTCTCTTGCAAAATTCTTATGTTCAAAGCAAATCACCAACG +
Preference number: 6 (lower is better)
Translates to: KNSLKARQCLLLSEC*CLLQNSYVQSKSPT
Trigger: CGTTGGTGATTTGCTTTGAACATAAGAATTTTGCAAGAGACACAAACATTCAGACAATAGAAGACACTGTCTTGCCTTCAGGCTATTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520653.1
CDS TCA 72 bp TCTGATTCAACAGGTACTTGTTTAATTGCGACAACTTaGCCGGATTCCTTGTGTATTGCTTTAAATACACTT +
Preference number: 6 (lower is better)
Translates to: SDSTGTCLIATT*PDSLCIALNTL
Trigger: AAGTGTATTTAAAGCAATACACAAGGAATCCGGTCAAGTTGTCGCAATTAAACAAGTACCTGTTGAATCAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419617.7
ENST00000424861.6
ENST00000518165.5
ENST00000521649.5
ENST00000523601.5
ENST00000617590.1
CDS GCA 72 bp AAACTAAACATACTCTTAATTATGCAGCAATGGTTTTaGTCCTTGGTATCACCCAAACTTATGACTAACCCA +
Preference number: 6 (lower is better)
Translates to: KLNILLIMQQWF*SLVSPKLMTNP
Trigger: TGGGTTAGTCATAAGTTTGGGTGATACCAAGGAGCAAAACCATTGCTGCATAATTAAGAGTATGTTTAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523960.1
CDS CAA 72 bp CTGATTACAGTTTTCGTGACTCTTATTCTTGAAGTCTaGCTTATCAAAGTAGTCCATGAAAGATGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LITVFVTLILEV*LIKVVHERWSL
Trigger: CAAAGACCATCTTTCATGGACTACTTTGATAAGCAAGACTTCAAGAATAAGAGTCACGAAAACTGTAATCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000419617.7
ENST00000517832.1
ENST00000520440.1
ENST00000523601.5
ENST00000617590.1
CDS CAA 72 bp AGACAGTGTCTTCTATTGTCTGAATGTTTGTGTCTCTaGCAAAATTCTTATGTTCAAAGCAAATCACCAACG +
Preference number: 6 (lower is better)
Translates to: RQCLLLSECLCL*QNSYVQSKSPT
Trigger: CGTTGGTGATTTGCTTTGAACATAAGAATTTTGCAAGAGACACAAACATTCAGACAATAGAAGACACTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520653.1
CDS CAA 72 bp AGGAATGCAAATGATACAGCCAGTGTGAAAGTCGGTTaGGCAGTATTTTACAAAACTAAACATACTCTTAAT +
Preference number: 6 (lower is better)
Translates to: RNANDTASVKVG*AVFYKTKHTLN
Trigger: ATTAAGAGTATGTTTAGTTTTGTAAAATACTGCCAAACCGACTTTCACACTGGCTGTATCATTTGCATTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523960.1