RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK26 (Homo sapiens)

Ensembl gene IDs: ENSG00000134602

Ensembl transcript IDs: ENST00000354719.10, ENST00000394334.7, ENST00000394335.6, ENST00000481105.5, ENST00000496850.1

Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAATaGTTCAAACACAGGGTCTCAAATGTGATAATCATTGAGCTGCCT +
Preference number: 1 (lower is better)
Translates to: TIHQEVPLLLYIACK*FKHRVSNVIIIELP
Trigger: AGGCAGCTCAATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
3UTR-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCTTTGGTGGGGCTCTCTaGGTCCATATGAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSFGGAL*VHMKQK
Trigger: CTTCTGTTTCATATGGACCCAGAGAGCCCCACCAAA...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
3UTR-3UTR CCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTATTTGGTGGGGCTCTCTaGGTCCATATGAAACAGAAG +
Preference number: 2 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVFGGAL*VHMKQK
Trigger: CTTCTGTTTCATATGGACCCAGAGAGCCCCACCAAA...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
3UTR CAA 90 bp TACCTAAAAGAGAATGTAAATACTATACACCAAGAGGTACCTCTGTaGCTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAAT +
Preference number: 2 (lower is better)
Translates to: YLKENVNTIHQEVPL*LYIACKCFKHRVSN
Trigger: ATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATTCTCTTTTAGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
3UTR-3UTR GCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTCCAAATCTTCAGTGTTaGAAAGATCCAAAAGGCACA +
Preference number: 2 (lower is better)
Translates to: LYIACKCFKHRVSNVIIIPNLQC*KDPKGT
Trigger: TGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGG...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
3UTR-3UTR CAA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGAATCTTGACGTAGGTTaGGTGGGGCTCTCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMNLDVG*VGLSGS
Trigger: GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATT...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
3UTR GCA 72 bp CAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAATaGTTCAAACACAGGGTCTCAAATGTGATAATCATT +
Preference number: 3 (lower is better)
Translates to: QEVPLLLYIACK*FKHRVSNVIII
Trigger: AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAGCAACAGAGGTACCTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGCCTCGCTCCGCTTCTaGGGCGGTGGCGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLASLRF*GGGALG
Trigger: ACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCGCCGAGCGCTGTGAGTaGTGGTGGCTGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSAERCE*WWLGPG
Trigger: CCCAGGTCCCAGCCACCACCACTCACAGCGCTCGGC...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCCGATCGGGGCCTTTCTaGCGCCCGCCCGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLRSGPF*RPPAAE
Trigger: TTCAGCGGCGGGCGGGCGCCAGAAAGGCCCCGATCG...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGCGGCGGTGGCGCCTTaGGTTCGGACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLAAVAP*VRTGSS
Trigger: GGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGCGCTGTGAGTGGTGGTaGCTGGGACCTGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGRCEWW*LGPGLE
Trigger: CTCGAGCCCAGGTCCCAGCCACCACCACTCACAGCG...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCGCTGTGAGTGGTGGTaGCTGGGACCTGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSRCEWW*LGPGLE
Trigger: CTCGAGCCCAGGTCCCAGCCACCACCACTCACAGCG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGCCGAGCGCTGTGAGTaGTGGTGGCTGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSAERCE*WWLGPG
Trigger: CCCAGGTCCCAGCCACCACCACTCACAGCGCTCGGC...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCCCGCTTCTGCGGCGGTaGCGCCTTGGGTTCGGACTG +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLPLLRR*RLGFGL
Trigger: CAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGG...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCCGCTTCTGCGGCGGTaGCGCCTTGGGTTCGGACTG +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGPLLRR*RLGFGL
Trigger: CAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGG...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCCCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLPASGP*RRMLPR
Trigger: GCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGG...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTCCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSPASGP*RRMLPR
Trigger: GCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGG...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGPASGP*RRMLPR
Trigger: GCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGG...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCGCCTCGCTCCGCTTCTaGGGCGGTGGCGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSASLRF*GGGALG
Trigger: ACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGC...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCCGCTGTGAGTGGTGGTaGCTGGGACCTGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLRCEWW*LGPGLE
Trigger: CTCGAGCCCAGGTCCCAGCCACCACCACTCACAGCG...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGAGCGCTGTGAGTGGTaGTGGCTGGGACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSERCEW*WLGPGL
Trigger: GAGCCCAGGTCCCAGCCACCACCACTCACAGCGCTC...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGGAGCGCTGTGAGTGGTaGTGGCTGGGACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGERCEW*WLGPGL
Trigger: GAGCCCAGGTCCCAGCCACCACCACTCACAGCGCTC...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCCGATCGGGGCCTTTCTaGCGCCCGCCCGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSRSGPF*RPPAAE
Trigger: TTCAGCGGCGGGCGGGCGCCAGAAAGGCCCCGATCG...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGCCTTGGGTTCGGACTaGCTCCTCCCTCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLALGSD*LLPPGV
Trigger: TACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGCCTTGGGTTCGGACTaGCTCCTCCCTCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSALGSD*LLPPGV
Trigger: TACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGC...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTGCATCCCAGGCACTTaGACAGCCACCGGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSCIPGT*TATGEW
Trigger: CCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTGCTGCTCCTCTTCCTaGACGCCGAGCGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSCCSSS*TPSAVS
Trigger: ACTCACAGCGCTCGGCGTTCAGGAAGAGGAGCAGCA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGCCTCGCTCCGCTTCTaGGGCGGTGGCGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLASLRF*GGGALG
Trigger: ACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGC...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGGCCATGGAGGCGAATaGTGCCTCGCTCCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLGHGGE*CLAPLL
Trigger: CAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCGCCGAGCGCTGTGAGTaGTGGTGGCTGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSAERCE*WWLGPG
Trigger: CCCAGGTCCCAGCCACCACCACTCACAGCGCTCGGC...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTCGATCGGGGCCTTTCTaGCGCCCGCCCGCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGRSGPF*RPPAAE
Trigger: TTCAGCGGCGGGCGGGCGCCAGAAAGGCCCCGATCG...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGCGGCGGTGGCGCCTTaGGTTCGGACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHAAVAP*VRTGSS
Trigger: GGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGC...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGCGGCGGTGGCGCCTTaGGTTCGGACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLAAVAP*VRTGSS
Trigger: GGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGC...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGACAGCCACCGGCGAGTaGGCCATGGAGGCGAATGCT +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGTATGE*AMEANA
Trigger: AGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTGCATCCCAGGCACTTaGACAGCCACCGGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLCIPGT*TATGEW
Trigger: CCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCA...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGTGCTGCTCCTCTTCCTaGACGCCGAGCGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGCCSSS*TPSAVS
Trigger: ACTCACAGCGCTCGGCGTTCAGGAAGAGGAGCAGCA...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTGCCGAGCGCTGTGAGTaGTGGTGGCTGGGACCTGGG +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGAERCE*WWLGPG
Trigger: CCCAGGTCCCAGCCACCACCACTCACAGCGCTCGGC...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGCGGCGGTGGCGCCTTaGGTTCGGACTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVAAVAP*VRTGSS
Trigger: GGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTGAGCGCTGTGAGTGGTaGTGGCTGGGACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGERCEW*WLGPGL
Trigger: GAGCCCAGGTCCCAGCCACCACCACTCACAGCGCTC...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGCCTTGGGTTCGGACTaGCTCCTCCCTCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHALGSD*LLPPGV
Trigger: TACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGC...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNPASGP*RRMLPR
Trigger: GCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGG...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCACAGCCACCGGCGAGTaGGCCATGGAGGCGAATGCT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSTATGE*AMEANA
Trigger: AGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCTGCTGCTCCTCTTCCTaGACGCCGAGCGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSCCSSS*TPSAVS
Trigger: ACTCACAGCGCTCGGCGTTCAGGAAGAGGAGCAGCA...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTCACCATTTTATCTGTaGTGCCGGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSSPFYL*CRDRRL
Trigger: AAGCCGCCTGTCCCGGCATCACAGATAAAATGGTGA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGCCTCGCTCCGCTTCTaGGGCGGTGGCGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMASLRF*GGGALG
Trigger: ACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGC...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGCCTTGGGTTCGGACTaGCTCCTCCCTCCGGGGGTA +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVALGSD*LLPPGV
Trigger: TACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATTGCATCCCAGGCACTTaGACAGCCACCGGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHCIPGT*TATGEW
Trigger: CCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCA...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGTGCATCCCAGGCACTTaGACAGCCACCGGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLCIPGT*TATGEW
Trigger: CCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCA...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGGAAAACTTCCCCAAATaGGCCTTTCCCAATGCGCTC +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGENFPK*AFPNAL
Trigger: GAGCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTC...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCGAAAACTTCCCCAAATaGGCCTTTCCCAATGCGCTC +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSENFPK*AFPNAL
Trigger: GAGCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTC...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGAAGAAGATCCAGTGCTaGACCACCGCCCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGKKIQC*TTAQVF
Trigger: GAATACCTGGGCGGTGGTTCAGCACTGGATCTTCTT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTAAGAAGATCCAGTGCTaGACCACCGCCCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSKKIQC*TTAQVF
Trigger: GAATACCTGGGCGGTGGTTCAGCACTGGATCTTCTT...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGTGAGTGGTGGTGGCTaGGACCTGGGCTCGAGTGAT +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHVSGGG*DLGSSD
Trigger: ATCACTCGAGCCCAGGTCCCAGCCACCACCACTCAC...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGCCGCTTCTGCGGCGGTaGCGCCTTGGGTTCGGACTG +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMPLLRR*RLGFGL
Trigger: CAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGG...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGAAAACTTCCCCAAATaGGCCTTTCCCAATGCGCTC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSENFPK*AFPNAL
Trigger: GAGCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTC...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCAACATCTCCTTGTTCTaGGAGCAAGACATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSNISLF*EQDIGS
Trigger: GCTGCCAATGTCTTGCTCTCAGAACAAGGAGATGTT...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAACGCTGTGAGTGGTGGTaGCTGGGACCTGGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKRCEWW*LGPGLE
Trigger: CTCGAGCCCAGGTCCCAGCCACCACCACTCACAGCG...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTTTGGTGGGGCTCTCTaGGTCCATATGAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSFGGAL*VHMKQK
Trigger: CTTCTGTTTCATATGGACCCAGAGAGCCCCACCAAA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCAAGAAGATCCAGTGCTaGACCACCGCCCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSKKIQC*TTAQVF
Trigger: GAATACCTGGGCGGTGGTTCAGCACTGGATCTTCTT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSCVSVS*PATPKS
Trigger: TGATTTTGGAGTTGCTGGTCAGCTGACAGATACACA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTGCTGTAGGACGAAATaGTGGATCTTTGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSCCRTK*WIFVQA
Trigger: TGCCTGAACAAAGATCCATCATTTCGTCCTACAGCA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGSSSIA*FLLALF
Trigger: GAATAACGCTAGCAGGAATCAGGCGATTGAAGAACT...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAACATGGAGGCGAATGCTaGCTCGCTCCGCTTCTGCGG +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKHGGEC*LAPLLR
Trigger: CCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATG...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTGGCCATGGAGGCGAATaGTGCCTCGCTCCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIIGHGGE*CLAPLL
Trigger: CAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCC...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGGCCATGGAGGCGAATaGTGCCTCGCTCCGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMGHGGE*CLAPLL
Trigger: CAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCC...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAACAGCCACCGGCGAGTaGGCCATGGAGGCGAATGCT +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKTATGE*AMEANA
Trigger: AGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGT...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTACAGCCACCGGCGAGTaGGCCATGGAGGCGAATGCT +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIITATGE*AMEANA
Trigger: AGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGT...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAATGCATCCCAGGCACTTaGACAGCCACCGGCGAGTGG +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKCIPGT*TATGEW
Trigger: CCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCA...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGTTTGGTGGGGCTCTCTaGGTCCATATGAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGFGGAL*VHMKQK
Trigger: CTTCTGTTTCATATGGACCCAGAGAGCCCCACCAAA...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCGATCCAAAAGGCACATaGAGCTCATGGGTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSDPKGT*SSWVKH
Trigger: ATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATC...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTTGCTGCTCCTCTTCCTaGACGCCGAGCGCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIICCSSS*TPSAVS
Trigger: ACTCACAGCGCTCGGCGTTCAGGAAGAGGAGCAGCA...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGCVSVS*PATPKS
Trigger: TGATTTTGGAGTTGCTGGTCAGCTGACAGATACACA...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSCVSVS*PATPKS
Trigger: TGATTTTGGAGTTGCTGGTCAGCTGACAGATACACA...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLCVSVS*PATPKS
Trigger: TGATTTTGGAGTTGCTGGTCAGCTGACAGATACACA...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSSSSIA*FLLALF
Trigger: GAATAACGCTAGCAGGAATCAGGCGATTGAAGAACT...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLSSSIA*FLLALF
Trigger: GAATAACGCTAGCAGGAATCAGGCGATTGAAGAACT...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTCACCATTTTATCTGTaGTGCCGGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGSPFYL*CRDRRL
Trigger: AAGCCGCCTGTCCCGGCATCACAGATAAAATGGTGA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGTCACCATTTTATCTGTaGTGCCGGGACAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLSPFYL*CRDRRL
Trigger: AAGCCGCCTGTCCCGGCATCACAGATAAAATGGTGA...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGAGAACTCTCATTGGATaGATATCGGAGTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGRTLIG*ISELGG
Trigger: GCCACCTAACTCCGATATGCATCCAATGAGAGTTCT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTAGAACTCTCATTGGATaGATATCGGAGTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSRTLIG*ISELGG
Trigger: GCCACCTAACTCCGATATGCATCCAATGAGAGTTCT...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCACAAGATCTTGCTCTaGCCCATTCTGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSHKILL*PILYFL
Trigger: AAGAAAGTACAGAATGGGGCAGAGCAAGATCTTGTG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGGTTTGCACAAGATCTTaGTCTGCCCCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGVCTRS*SAPFCT
Trigger: AGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAAC...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTCTGGAACTCATCAAATaGACCAGCTCGAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSLELIK*TSSKKI
Trigger: GATCTTCTTCGAGCTGGTCCATTTGATGAGTTCCAG...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCCTGGAACTCATCAAATaGACCAGCTCGAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLLELIK*TSSKKI
Trigger: GATCTTCTTCGAGCTGGTCCATTTGATGAGTTCCAG...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCAGCATGGTAGCAATCTaGAACTCATCAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSSMVAI*NSSNGP
Trigger: TGGTCCATTTGATGAGTTCCAGATTGCTACCATGCT...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTCTGAGAGCAAGACATTaGCAGCTTTTATGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSLRARH*QLLCLG
Trigger: ACCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAG...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGAGGAGCCATCCAAAATaGAGTTCCCACAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGRSHPK*SSHKGI
Trigger: AATACCTTTGTGGGAACTCCATTTTGGATGGCTCCT...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGATCCAAAAGGCACATaGAGCTCATGGGTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLDPKGT*SSWVKH
Trigger: ATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAAAGAAGATCCAGTGCTaGACCACCGCCCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVKKIQC*TTAQVF
Trigger: GAATACCTGGGCGGTGGTTCAGCACTGGATCTTCTT...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATAAGAAGATCCAGTGCTaGACCACCGCCCAGGTATTC +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNKKIQC*TTAQVF
Trigger: GAATACCTGGGCGGTGGTTCAGCACTGGATCTTCTT...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCCAAATCTTCAGTGTTaGAAAGATCCAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSPNLQC*KDPKGT
Trigger: TGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCACAAGATCTTGCTCTaGCCCATTCTGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGHKILL*PILYFL
Trigger: AAGAAAGTACAGAATGGGGCAGAGCAAGATCTTGTG...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGGCGTTATTCTCGTCCTaGTGTTTAAGTTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGALFSS*CLSSAN
Trigger: ATTTGCTGAACTTAAACAGCAGGACGAGAATAACGC...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGATAGCAACGACTTGCTaGGTACGGTTATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGIATTC*VRLSIP
Trigger: AGGAATTGATAACCGTACCCAGCAAGTCGTTGCTAT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGAGCATGGTAGCAATCTaGAACTCATCAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGSMVAI*NSSNGP
Trigger: TGGTCCATTTGATGAGTTCCAGATTGCTACCATGCT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGAGGAGCCATCCAAAATaGAGTTCCCACAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGRSHPK*SSHKGI
Trigger: AATACCTTTGTGGGAACTCCATTTTGGATGGCTCCT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCAGGAGCCATCCAAAATaGAGTTCCCACAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLRSHPK*SSHKGI
Trigger: AATACCTTTGTGGGAACTCCATTTTGGATGGCTCCT...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGGTCTCCAACAAGAGTTaGAGGATTGTTTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGVSNKS*RIVFGN
Trigger: ATTCCCAAAAACAATCCTCCAACTCTTGTTGGAGAC...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATGAAAACTTCCCCAAATaGGCCTTTCCCAATGCGCTC +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNENFPK*AFPNAL
Trigger: GAGCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTC...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR TCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGGTTATCAATTCCTTTaGAAACTTCCCCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLGYQFL*KLPQMS
Trigger: GCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGGTGAATTTTCTTTTCTaGATGCAGATAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGVNFLF*MQIVQT
Trigger: GGTCTGGACTATCTGCATTCAGAAAAGAAAATTCAC...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGTGAATTTTCTTTTCTaGATGCAGATAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSVNFLF*MQIVQT
Trigger: GGTCTGGACTATCTGCATTCAGAAAAGAAAATTCAC...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGAACATCTCCTTGTTCTaGGAGCAAGACATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLNISLF*EQDIGS
Trigger: GCTGCCAATGTCTTGCTCTCAGAACAAGGAGATGTT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATAACATCTCCTTGTTCTaGGAGCAAGACATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHNISLF*EQDIGS
Trigger: GCTGCCAATGTCTTGCTCTCAGAACAAGGAGATGTT...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCCAAATCTTCAGTGTTaGAAAGATCCAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGPNLQC*KDPKGT
Trigger: TGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGG...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCGTTTGCACAAGATCTTaGTCTGCCCCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSVCTRS*SAPFCT
Trigger: AGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAAC...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGAAACAGAACTCTCATTaGATGCATATCGGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGKQNSH*MHIGVR
Trigger: CCTAACTCCGATATGCATCCAATGAGAGTTCTGTTT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGTCTCCAACAAGAGTTaGAGGATTGTTTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSVSNKS*RIVFGN
Trigger: ATTCCCAAAAACAATCCTCCAACTCTTGTTGGAGAC...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTAC +
Preference number: 4 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGILYFL*IRLLSY
Trigger: GTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAAT...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTAC +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSILYFL*IRLLSY
Trigger: GTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAAT...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTTGGTGGGGCTCTCTaGGTCCATATGAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGFGGAL*VHMKQK
Trigger: CTTCTGTTTCATATGGACCCAGAGAGCCCCACCAAA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCCAAACACCTATCCTTaGGTAAATGATCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSPNTYP*VNDLAL
Trigger: TAAAGCAAGATCATTTACCCAAGGATAGGTGTTTGG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAATCA +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGCVSVS*PATPKS
Trigger: TGATTTTGGAGTTGCTGGTCAGCTGACAGATACACA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATTGCTGTAGGACGAAATaGTGGATCTTTGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHCCRTK*WIFVQA
Trigger: TGCCTGAACAAAGATCCATCATTTCGTCCTACAGCA...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGSSSIA*FLLALF
Trigger: GAATAACGCTAGCAGGAATCAGGCGATTGAAGAACT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTGTTTTAAGAAGGTATaGCTTATTTACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLCFKKV*LIYTSP
Trigger: TGGGGAGGTGTAAATAAGTCATACCTTCTTAAAACA...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTTAATAGCAACGACTTaGTGGGTACGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLLIATT*WVRLSI
Trigger: AATTGATAACCGTACCCAGCAAGTCGTTGCTATTAA...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAGAACTCTCATTGGATaGATATCGGAGTTAGGTGGC +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGRTLIG*ISELGG
Trigger: GCCACCTAACTCCGATATGCATCCAATGAGAGTTCT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTTTGCACAAGATCTTaGTCTGCCCCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLVCTRS*SAPFCT
Trigger: AGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAAC...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATAGCAACGACTTGCTaGGTACGGTTATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSIATTC*VRLSIP
Trigger: AGGAATTGATAACCGTACCCAGCAAGTCGTTGCTAT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGCTGGAACTCATCAAATaGACCAGCTCGAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLLELIK*TSSKKI
Trigger: GATCTTCTTCGAGCTGGTCCATTTGATGAGTTCCAG...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGCTGAGAGCAAGACATTaGCAGCTTTTATGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLLRARH*QLLCLG
Trigger: ACCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAG...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTCTGAGAGCAAGACATTaGCAGCTTTTATGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGLRARH*QLLCLG
Trigger: ACCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAG...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCAGGAGCCATCCAAAATaGAGTTCCCACAAAGGTATT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSRSHPK*SSHKGI
Trigger: AATACCTTTGTGGGAACTCCATTTTGGATGGCTCCT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATTTTGGTGGGGCTCTCTaGGTCCATATGAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNFGGAL*VHMKQK
Trigger: CTTCTGTTTCATATGGACCCAGAGAGCCCCACCAAA...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGATCCAAAAGGCACATaGAGCTCATGGGTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLDPKGT*SSWVKH
Trigger: ATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATC...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTGCGCTCTAATTTTGTaGACAGTTCTTCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGCALIL*TVLLDQ
Trigger: CTGATCCAGAAGAACTGTTCACAAAATTAGAGCGCA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTATGCTGTAGGACGAAATaGTGGATCTTTGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVCCRTK*WIFVQA
Trigger: TGCCTGAACAAAGATCCATCATTTCGTCCTACAGCA...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR TCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTC +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVSSSIA*FLLALF
Trigger: GAATAACGCTAGCAGGAATCAGGCGATTGAAGAACT...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCTGTCTGCTAATCCCATaGTCCTTTAAATATGACCCA +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSCLLIP*SFKYDP
Trigger: TGGGTCATATTTAAAGGATCATGGGATTAGCAGACA...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481105.5
CDS-3UTR GCA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGGCAAAAACCAAACTGTaGAGATCCAAACAATTAAAC +
Preference number: 4 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGAKTKL*RSKQLN
Trigger: GTTTAATTGTTTGGATCTGCACAGTTTGGTTTTTGC...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGTTTGCACAAGATCTTaGTCTGCCCCATTCTGTACT +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVVCTRS*SAPFCT
Trigger: AGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAAC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCGCGTTATTCTCGTCCTaGTGTTTAAGTTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSALFSS*CLSSAN
Trigger: ATTTGCTGAACTTAAACAGCAGGACGAGAATAACGC...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTGGAACTCATCAAATaGACCAGCTCGAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNLELIK*TSSKKI
Trigger: GATCTTCTTCGAGCTGGTCCATTTGATGAGTTCCAG...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAGCATGGTAGCAATCTaGAACTCATCAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGSMVAI*NSSNGP
Trigger: TGGTCCATTTGATGAGTTCCAGATTGCTACCATGCT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGAGCATGGTAGCAATCTaGAACTCATCAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLSMVAI*NSSNGP
Trigger: TGGTCCATTTGATGAGTTCCAGATTGCTACCATGCT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGATCCAAAAGGCACATaGAGCTCATGGGTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVDPKGT*SSWVKH
Trigger: ATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCAATTTAACCTTTGTGTaGACAGAAATCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLNLTFV*TEIILY
Trigger: GTACAGGATGATTTCTGTCCACACAAAGGTTAAATT...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCAAACCCCTAAAACACTaGAGTATGCTTCACCTAGAA +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSKPLKH*SMLHLE
Trigger: TTCTAGGTGAAGCATACTCCAGTGTTTTAGGGGTTT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGTTATCAATTCCTTTaGAAACTTCCCCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHGYQFL*KLPQMS
Trigger: GCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACC...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR TCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTGTGAATTTTCTTTTCTaGATGCAGATAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGVNFLF*MQIVQT
Trigger: GGTCTGGACTATCTGCATTCAGAAAAGAAAATTCAC...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTAACATCTCCTTGTTCTaGGAGCAAGACATTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIINISLF*EQDIGS
Trigger: GCTGCCAATGTCTTGCTCTCAGAACAAGGAGATGTT...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAAGAGGTACCTCTGTTaGTGTACATTGCCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGKRYLC*CTLPVN
Trigger: ATTTACAGGCAATGTACAGCAACAGAGGTACCTCTT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTACACAAGATCTTGCTCTaGCCCATTCTGTACTTTCTT +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVHKILL*PILYFL
Trigger: AAGAAAGTACAGAATGGGGCAGAGCAAGATCTTGTG...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTGCGTTATTCTCGTCCTaGTGTTTAAGTTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGALFSS*CLSSAN
Trigger: ATTTGCTGAACTTAAACAGCAGGACGAGAATAACGC...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATATAGCAACGACTTGCTaGGTACGGTTATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNIATTC*VRLSIP
Trigger: AGGAATTGATAACCGTACCCAGCAAGTCGTTGCTAT...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATAGCATGGTAGCAATCTaGAACTCATCAAATGGACCA +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNSMVAI*NSSNGP
Trigger: TGGTCCATTTGATGAGTTCCAGATTGCTACCATGCT...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGAAACAGAACTCTCATTaGATGCATATCGGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLKQNSH*MHIGVR
Trigger: CCTAACTCCGATATGCATCCAATGAGAGTTCTGTTT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAAACAGAACTCTCATTaGATGCATATCGGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGKQNSH*MHIGVR
Trigger: CCTAACTCCGATATGCATCCAATGAGAGTTCTGTTT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGAAACCCCTAAAACACTaGAGTATGCTTCACCTAGAA +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLKPLKH*SMLHLE
Trigger: TTCTAGGTGAAGCATACTCCAGTGTTTTAGGGGTTT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAAACCCCTAAAACACTaGAGTATGCTTCACCTAGAA +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGKPLKH*SMLHLE
Trigger: TTCTAGGTGAAGCATACTCCAGTGTTTTAGGGGTTT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTATCAATTCCTTTaGAAACTTCCCCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVGYQFL*KLPQMS
Trigger: GCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR TCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGTGAATTTTCTTTTCTaGATGCAGATAGTCCAGACC +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVVNFLF*MQIVQT
Trigger: GGTCTGGACTATCTGCATTCAGAAAAGAAAATTCAC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTAATAGCAACGACTTaGTGGGTACGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGLIATT*WVRLSI
Trigger: AATTGATAACCGTACCCAGCAAGTCGTTGCTATTAA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR GCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTACCAAATCTTCAGTGTTaGAAAGATCCAAAAGGCACA +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVPNLQC*KDPKGT
Trigger: TGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGG...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATAAGAGGTACCTCTGTTaGTGTACATTGCCTGTAAAT +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNKRYLC*CTLPVN
Trigger: ATTTACAGGCAATGTACAGCAACAGAGGTACCTCTT...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCGCAAAAACCAAACTGTaGAGATCCAAACAATTAAAC +
Preference number: 4 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSAKTKL*RSKQLN
Trigger: GTTTAATTGTTTGGATCTGCACAGTTTGGTTTTTGC...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGCGTTATTCTCGTCCTaGTGTTTAAGTTCAGCAAAT +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVALFSS*CLSSAN
Trigger: ATTTGCTGAACTTAAACAGCAGGACGAGAATAACGC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTGTGAACAGTTCTTCTaGATCAGCTATGTTATTCTG +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGCEQFF*ISYVIL
Trigger: CAGAATAACATAGCTGATCCAGAAGAACTGTTCACA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTCTGGAACTCATCAAATaGACCAGCTCGAAGAAGATC +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIILELIK*TSSKKI
Trigger: GATCTTCTTCGAGCTGGTCCATTTGATGAGTTCCAG...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAACTGAGAGCAAGACATTaGCAGCTTTTATGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKLRARH*QLLCLG
Trigger: ACCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAG...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGCTGAGAGCAAGACATTaGCAGCTTTTATGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMLRARH*QLLCLG
Trigger: ACCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAG...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGTCTCCAACAAGAGTTaGAGGATTGTTTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVVSNKS*RIVFGN
Trigger: ATTCCCAAAAACAATCCTCCAACTCTTGTTGGAGAC...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTAC +
Preference number: 4 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLILYFL*IRLLSY
Trigger: GTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAAT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTAC +
Preference number: 4 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHILYFL*IRLLSY
Trigger: GTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAAT...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGATCCAAAAGGCACATaGAGCTCATGGGTTAAGCAT +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMDPKGT*SSWVKH
Trigger: ATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATC...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
3UTR CAA 72 bp GAGAATGTAAATACTATACACCAAGAGGTACCTCTGTaGCTGTACATTGCCTGTAAATGCTTCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: ENVNTIHQEVPL*LYIACKCFKHR
Trigger: CCTGTGTTTGAAGCATTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTATGTTTTAAGAAGGTATaGCTTATTTACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVCFKKV*LIYTSP
Trigger: TGGGGAGGTGTAAATAAGTCATACCTTCTTAAAACA...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATTGTTTTAAGAAGGTATaGCTTATTTACACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNCFKKV*LIYTSP
Trigger: TGGGGAGGTGTAAATAAGTCATACCTTCTTAAAACA...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTATTAATAGCAACGACTTaGTGGGTACGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVLIATT*WVRLSI
Trigger: AATTGATAACCGTACCCAGCAAGTCGTTGCTATTAA...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATTGTGAACAGTTCTTCTaGATCAGCTATGTTATTCTG +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNCEQFF*ISYVIL
Trigger: CAGAATAACATAGCTGATCCAGAAGAACTGTTCACA...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAATAGCAACGACTTGCTaGGTACGGTTATCAATTCCT +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKIATTC*VRLSIP
Trigger: AGGAATTGATAACCGTACCCAGCAAGTCGTTGCTAT...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354719.10
ENST00000394334.7
CDS-3UTR CCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCCAAACACCTATCCTTaGGTAAATGATCTTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNPNTYP*VNDLAL
Trigger: TAAAGCAAGATCATTTACCCAAGGATAGGTGTTTGG...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAATTTAACCTTTGTGTaGACAGAAATCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGNLTFV*TEIILY
Trigger: GTACAGGATGATTTCTGTCCACACAAAGGTTAAATT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR TCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAGGTTATCAATTCCTTTaGAAACTTCCCCAAATGAGC +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKGYQFL*KLPQMS
Trigger: GCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACC...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354719.10
ENST00000394334.7
CDS-3UTR GCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGTACATTGCCTGTAAATaGTTCAAACACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMYIACK*FKHRVS
Trigger: TGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTA...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTTACATTGCCTGTAAATaGTTCAAACACAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIIYIACK*FKHRVS
Trigger: TGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTA...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR GCA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATGCAAAAACCAAACTGTaGAGATCCAAACAATTAAAC +
Preference number: 4 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNAKTKL*RSKQLN
Trigger: GTTTAATTGTTTGGATCTGCACAGTTTGGTTTTTGC...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGAAACAGAACTCTCATTaGATGCATATCGGAGTTAGG +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMKQNSH*MHIGVR
Trigger: CCTAACTCCGATATGCATCCAATGAGAGTTCTGTTT...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR GCA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTTTAATAGCAACGACTTaGTGGGTACGGTTATCAATT +
Preference number: 4 (lower is better)
Translates to: LYIACKCFKHRVSNVIIILIATT*WVRLSI
Trigger: AATTGATAACCGTACCCAGCAAGTCGTTGCTATTAA...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354719.10
ENST00000394334.7
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAATGTGAACAGTTCTTCTaGATCAGCTATGTTATTCTG +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKCEQFF*ISYVIL
Trigger: CAGAATAACATAGCTGATCCAGAAGAACTGTTCACA...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354719.10
ENST00000394334.7
CDS-3UTR CCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGTGTGAACAGTTCTTCTaGATCAGCTATGTTATTCTG +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMCEQFF*ISYVIL
Trigger: CAGAATAACATAGCTGATCCAGAAGAACTGTTCACA...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR CCA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTAC +
Preference number: 4 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMILYFL*IRLLSY
Trigger: GTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAAT...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CCA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAAATTTAACCTTTGTGTaGACAGAAATCATCCTGTAC +
Preference number: 4 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKNLTFV*TEIILY
Trigger: GTACAGGATGATTTCTGTCCACACAAAGGTTAAATT...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS GCA 90 bp ACCGGCGAGTGGGCCATGGAGGCGAATGCTGCCTCGCTCCGCTTCTaGGGCGGTGGCGCCTTGGGTTCGGACTGGCTCCTCCCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: TGEWAMEANAASLRF*GGGALGSDWLLPPG
Trigger: CCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 90 bp GCTGCCTCGCTCCGCTTCTGCGGCGGTGGCGCCTTGGGTTCGGACTaGCTCCTCCCTCCGGGGGTAGTTCGGCGGCCCTCCCAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: AASLRFCGGGALGSD*LLPPGVVRRPSQAF
Trigger: AAAAGCCTGGGAGGGCCGCCGAACTACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 90 bp GTGGGCCATGGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGTaGCGCCTTGGGTTCGGACTGGCTCCTCCCTCCGGGGGTAGTTCG +
Preference number: 5 (lower is better)
Translates to: VGHGGECCLAPLLRR*RLGFGLAPPSGGSS
Trigger: CGAACTACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 90 bp ACCCCTGCATCCCAGGCACTTGGACAGCCACCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGTGGCGCCT +
Preference number: 5 (lower is better)
Translates to: TPASQALGQPPASGP*RRMLPRSASAAVAP
Trigger: AGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCAGGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394335.6
CDS GCA 90 bp AGGCACTTGGACAGCCACCGGCGAGTGGGCCATGGAGGCGAATGCTaGCTCGCTCCGCTTCTGCGGCGGTGGCGCCTTGGGTTCGGACTG +
Preference number: 5 (lower is better)
Translates to: RHLDSHRRVGHGGEC*LAPLLRRWRLGFGL
Trigger: CAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 90 bp TATTCTGCATCCCAGGCACTTGGACAGCCACCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGTGGCGCCT +
Preference number: 5 (lower is better)
Translates to: YSASQALGQPPASGP*RRMLPRSASAAVAP
Trigger: AGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCAGAATA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS CCA 90 bp AATTTAGACCCCTGCATCCCAGGCACTTGGACAGCCACCGGCGAGTaGGCCATGGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: NLDPCIPGTWTATGE*AMEANAASLRFCGG
Trigger: ACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCAGGGGTCTAAATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394335.6
CDS CCA 90 bp GCTATGTTATTCTGCATCCCAGGCACTTGGACAGCCACCGGCGAGTaGGCCATGGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: AMLFCIPGTWTATGE*AMEANAASLRFCGG
Trigger: ACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCAGAATAACATAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
CDS-3UTR CAA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTGCGGCGGTGGCGCCTaGGGTTCGGACTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLCGGGA*GSDWLL
Trigger: GAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCA...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGCTGCATCCCAGGCACTaGGACAGCCACCGGCGAGTG +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGLHPRH*DSHRRV
Trigger: CACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCAG...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCTGCGGCGGTGGCGCCTaGGGTTCGGACTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSCGGGA*GSDWLL
Trigger: GAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCA...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGTGCGGCGGTGGCGCCTaGGGTTCGGACTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLCGGGA*GSDWLL
Trigger: GAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCA...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATTGCGGCGGTGGCGCCTaGGGTTCGGACTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNCGGGA*GSDWLL
Trigger: GAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCA...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGAATCTTGACGTAGGTTaGGTGGGGCTCTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGNLDVG*VGLSGS
Trigger: GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATT...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS TCA 90 bp GCGGCTTCAGCCACAGCAATACTTTTCTCGAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTCTCGTCCTGTGCCCCATTCTGTACT +
Preference number: 5 (lower is better)
Translates to: AASATAILFSSSSIA*FLLALFSSCAPFCT
Trigger: AGTACAGAATGGGGCACAGGACGAGAATAACGCTAGCAGGAATCAGGCGATTGAAGAACTCGAGAAAAGTATTGCTGTGGCTGAAGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354719.10
CDS CCA 90 bp CCTGCTAGCGTTATTCTCGTCCTGTGCCCCATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTACGGTGGTAAAGCTCCATTCAGGATG +
Preference number: 5 (lower is better)
Translates to: PASVILVLCPILYFL*IRLLSYGGKAPFRM
Trigger: CATCCTGAATGGAGCTTTACCACCGTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATGGGGCACAGGACGAGAATAACGCTAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354719.10
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCTGAGAGCAAGACATaGGCAGCTTTTATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGSESKT*AAFMSR
Trigger: CCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAGA...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTCTGAGAGCAAGACATaGGCAGCTTTTATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSSESKT*AAFMSR
Trigger: CCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAGA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTTAGGTGGCTCTCCCTaGGCTAGTTCAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSLGGSP*ASSIAV
Trigger: TACTGCTATTGAACTAGCCAAGGGAGAGCCACCTAA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTTAGGTGGCTCTCCCTaGGCTAGTTCAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGLGGSP*ASSIAV
Trigger: TACTGCTATTGAACTAGCCAAGGGAGAGCCACCTAA...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCAATCTTGACGTAGGTTaGGTGGGGCTCTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSNLDVG*VGLSGS
Trigger: GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCAAACAACTCAGGGTTaGCACAAGATCTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSQTTQG*HKILLC
Trigger: GCAGAGCAAGATCTTGTGCAAACCCTGAGTTGTTTG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS TCA 90 bp TTTGGATCAGGCTTCTTTCGTACGGTGGTAAAGCTCCATTCAGGATaGGTATTGTTTTCCCTGCTGGTAGATTCCGAATCAGAGCCCTCG +
Preference number: 5 (lower is better)
Translates to: FGSGFFRTVVKLHSG*VLFSLLVDSESEPS
Trigger: CGAGGGCTCTGATTCGGAATCTACCAGCAGGGAAAACAATACTCATCCTGAATGGAGCTTTACCACCGTACGAAAGAAGCCTGATCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS TCA 90 bp GCGGCTTCAGCCACAGCAATACTTTTCTCGAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTCTCGTCCTGCTGTTTAAGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: AASATAILFSSSSIA*FLLALFSSCCLSSA
Trigger: TGCTGAACTTAAACAGCAGGACGAGAATAACGCTAGCAGGAATCAGGCGATTGAAGAACTCGAGAAAAGTATTGCTGTGGCTGAAGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS CCA 90 bp CAGGGTTTGCACAAGATCTTGCTCTGCCCCATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTACGGTGGTAAAGCTCCATTCAGGATG +
Preference number: 5 (lower is better)
Translates to: QGLHKILLCPILYFL*IRLLSYGGKAPFRM
Trigger: CATCCTGAATGGAGCTTTACCACCGTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAACCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGTTAGGTGGCTCTCCCTaGGCTAGTTCAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGLGGSP*ASSIAV
Trigger: TACTGCTATTGAACTAGCCAAGGGAGAGCCACCTAA...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATAATCTTGACGTAGGTTaGGTGGGGCTCTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHNLDVG*VGLSGS
Trigger: GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATT...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTAATCTTGACGTAGGTTaGGTGGGGCTCTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGNLDVG*VGLSGS
Trigger: GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGCAAGAGGTACCTCTGTaGCTGTACATTGCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGQEVPL*LYIACK
Trigger: TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTG...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCAAACAACTCAGGGTTaGCACAAGATCTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGQTTQG*HKILLC
Trigger: GCAGAGCAAGATCTTGTGCAAACCCTGAGTTGTTTG...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCGGTTATCAATTCCTTaGAAAACTTCCCCAAATGAG +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSRLSIP*KTSPNE
Trigger: CTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGCGGTTATCAATTCCTTaGAAAACTTCCCCAAATGAG +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGRLSIP*KTSPNE
Trigger: CTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCG...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCTTTAATAGCAACGACTaGCTGGGTACGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSFNSND*LGTVIN
Trigger: ATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAA...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTTTAATAGCAACGACTaGCTGGGTACGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGFNSND*LGTVIN
Trigger: ATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAA...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGCATTCTGTACTTTCTTaGGATCAGGCTTCTTTCGTA +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGHSVLS*DQASFV
Trigger: TACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATG...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCCATTCTGTACTTTCTTaGGATCAGGCTTCTTTCGTA +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSHSVLS*DQASFV
Trigger: TACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATG...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTTTAATAGCAACGACTaGCTGGGTACGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLFNSND*LGTVIN
Trigger: ATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAA...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTTTTAATAGCAACGACTaGCTGGGTACGGTTATCAAT +
Preference number: 5 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSFNSND*LGTVIN
Trigger: ATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAA...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp GCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGATGACCCATAGTATTTaGTTACATATGAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: AHGLSIVNLDVGLVGLSGMTHSI*LHMSCH
Trigger: GTGACAGCTCATATGTAACAAAATACTATGGGTCAT...CCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTGGGTCCATGACCCATAGTATTTaGTTACATATGAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: HGLSIVNLDVGLVGLSGSMTHSI*LHMSCH
Trigger: GTGACAGCTCATATGTAACAAAATACTATGGGTCAT...GGACCCAGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTAGGTGGCTCTCCCTaGGCTAGTTCAATAGCAGTA +
Preference number: 5 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGLGGSP*ASSIAV
Trigger: TACTGCTATTGAACTAGCCAAGGGAGAGCCACCTAA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCATTCTGTACTTTCTTaGGATCAGGCTTCTTTCGTA +
Preference number: 5 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGHSVLS*DQASFV
Trigger: TACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATG...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTCAAACAACTCAGGGTTaGCACAAGATCTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGQTTQG*HKILLC
Trigger: GCAGAGCAAGATCTTGTGCAAACCCTGAGTTGTTTG...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCGTTGGAGGATTGTTTTaGGGAATAAGAAACAGAACT +
Preference number: 5 (lower is better)
Translates to: HGAHGLSIVNLDVGLVGLVGGLF*GIRNRT
Trigger: AGTTCTGTTTCTTATTCCCAAAAACAATCCTCCAAC...GAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGGTTGGAGGATTGTTTTaGGGAATAAGAAACAGAACT +
Preference number: 5 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGVGGLF*GIRNRT
Trigger: AGTTCTGTTTCTTATTCCCAAAAACAATCCTCCAAC...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp GGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGCTCTCTAATCAGCTTTATTTTTaGGCTCTCCAAATCCAAGCA +
Preference number: 5 (lower is better)
Translates to: GAHGLSIVNLDVGLVGLSNQLYF*ALQIQA
Trigger: TGCTTGGATTTGGAGAGCCAAAAAATAAAGCTGATT...AGAGAGCCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp GCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTGGGGGATGTAATGGCCACTTaGACTAAAAACTGTATTCCT +
Preference number: 5 (lower is better)
Translates to: AHGAHGLSIVNLDVGLVGDVMAT*TKNCIP
Trigger: AGGAATACAGTTTTTAGTCAAAGTGGCCATTACATC...CCCCACCAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp CAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCACCAAATGTCAGCTTTaGAGTCATAAGCTGACTGTT +
Preference number: 5 (lower is better)
Translates to: QIFSVAKIQKAHGAHGLSTKCQL*SHKLTV
Trigger: AACAGTCAGCTTATGACTCAAAAGCTGACATTTGGT...GCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTCCAAATCTTCAGTGTaGCAAAGATCCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGSKSSV*QRSKRH
Trigger: GTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGA...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGTCCAAATCTTCAGTGTaGCAAAGATCCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLSKSSV*QRSKRH
Trigger: GTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGA...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGTCTGAGAGCAAGACATaGGCAGCTTTTATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMSESKT*AAFMSR
Trigger: CCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAGA...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAATCTGAGAGCAAGACATaGGCAGCTTTTATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKSESKT*AAFMSR
Trigger: CCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAGA...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGACCAAATGTCAGCTTTaGAGTCATAAGCTGACTGTT +
Preference number: 5 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLTKCQL*SHKLTV
Trigger: AACAGTCAGCTTATGACTCAAAAGCTGACATTTGGT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAAGTCTCCAACAAGAGTaGGAGGATTGTTTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVSLQQE*EDCFWE
Trigger: TTCCCAAAAACAATCCTCCAACTCTTGTTGGAGACT...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATAGTCTCCAACAAGAGTaGGAGGATTGTTTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNSLQQE*EDCFWE
Trigger: TTCCCAAAAACAATCCTCCAACTCTTGTTGGAGACT...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATCATTCTGTACTTTCTTaGGATCAGGCTTCTTTCGTA +
Preference number: 5 (lower is better)
Translates to: SFFQIFSVAKIQKAHGAHHSVLS*DQASFV
Trigger: TACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATG...ATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATTCCAAATCTTCAGTGTaGCAAAGATCCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNSKSSV*QRSKRH
Trigger: GTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGA...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTATCCAAATCTTCAGTGTaGCAAAGATCCAAAAGGCAC +
Preference number: 5 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVSKSSV*QRSKRH
Trigger: GTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGA...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGCAAACAACTCAGGGTTaGCACAAGATCTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMQTTQG*HKILLC
Trigger: GCAGAGCAAGATCTTGTGCAAACCCTGAGTTGTTTG...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS TCA 90 bp GGAGTTCCCACAAAGGTATTTCTTTTAATCTGTGTATCTGTCAGCTaGCCAGCAACTCCAAAATCAGCAAGTTTAACATCTCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: GVPTKVFLLICVSVS*PATPKSASLTSPCS
Trigger: AGAACAAGGAGATGTTAAACTTGCTGATTTTGGAGTTGCTGGTCAGCTGACAGATACACAGATTAAAAGAAATACCTTTGTGGGAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTACGGTTATCAATTCCTTaGAAAACTTCCCCAAATGAG +
Preference number: 5 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVRLSIP*KTSPNE
Trigger: CTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCG...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp ATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTATGACCCATAGTATTTaGTTACATATGAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: IQKAHGAHGLSIVNLDVGMTHSI*LHMSCH
Trigger: GTGACAGCTCATATGTAACAAAATACTATGGGTCAT...ACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGGTTGGAGGATTGTTTTaGGGAATAAGAAACAGAACT +
Preference number: 5 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLVGGLF*GIRNRT
Trigger: AGTTCTGTTTCTTATTCCCAAAAACAATCCTCCAAC...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AGTGTTGCAAAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCGAAATGATGGATCTTaGTTCAGGCAAGCATCAATA +
Preference number: 5 (lower is better)
Translates to: SVAKIQKAHGAHGLSIVNRNDGS*FRQASI
Trigger: TATTGATGCTTGCCTGAACAAAGATCCATCATTTCG...ATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTTTGCAACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAACAAGAGGTACCTCTGTaGCTGTACATTGCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKQEVPL*LYIACK
Trigger: TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTG...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTCAAGAGGTACCTCTGTaGCTGTACATTGCCTGTAAA +
Preference number: 5 (lower is better)
Translates to: LYIACKCFKHRVSNVIIIQEVPL*LYIACK
Trigger: TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTG...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp CAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAGGTTTGAATCAGCTTTATTTTTaGGCTCTCCAAATCCAAGCA +
Preference number: 5 (lower is better)
Translates to: QKAHGAHGLSIVNLDVGLNQLYF*ALQIQA
Trigger: TGCTTGGATTTGGAGAGCCAAAAAATAAAGCTGATT...CAAACCTACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp AAGATCCAAAAGGCACATGGAGCTCATGGGTTAAGCATTGTTAATCTTGACGTAATGACCCATAGTATTTaGTTACATATGAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: KIQKAHGAHGLSIVNLDVMTHSI*LHMSCH
Trigger: GTGACAGCTCATATGTAACAAAATACTATGGGTCAT...TACGTCAAGATTAACAATGCTTAACCCATGAGCTCCATGTGCCTTTTGGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS-3UTR CAA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTAGTCTCCAACAAGAGTaGGAGGATTGTTTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: LYIACKCFKHRVSNVIIISLQQE*EDCFWE
Trigger: TTCCCAAAAACAATCCTCCAACTCTTGTTGGAGACT...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAAGTCTCCAACAAGAGTaGGAGGATTGTTTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKSLQQE*EDCFWE
Trigger: TTCCCAAAAACAATCCTCCAACTCTTGTTGGAGACT...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAACGGTTATCAATTCCTTaGAAAACTTCCCCAAATGAG +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKRLSIP*KTSPNE
Trigger: CTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCG...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354719.10
ENST00000394334.7
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAACCAAATGTCAGCTTTaGAGTCATAAGCTGACTGTT +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKTKCQL*SHKLTV
Trigger: AACAGTCAGCTTATGACTCAAAAGCTGACATTTGGT...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp AGTTTAATAGCTTCTTCCAAATCTTCAGTGTTGCAAAGATCCAAAAGGCACATGCGAAATGATGGATCTTaGTTCAGGCAAGCATCAATA +
Preference number: 5 (lower is better)
Translates to: SLIASSKSSVLQRSKRHMRNDGS*FRQASI
Trigger: TATTGATGCTTGCCTGAACAAAGATCCATCATTTCG...CATGTGCCTTTTGGATCTTTGCAACACTGAAGATTTGGAAGAAGCTATTAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAGTTGGAGGATTGTTTTaGGGAATAAGAAACAGAACT +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKVGGLF*GIRNRT
Trigger: AGTTCTGTTTCTTATTCCCAAAAACAATCCTCCAAC...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp AATGTAAATACTATACACCAAGAGGTACCTCTGTTGCTGTACATTGCCTGTAAAAATCAGCTTTATTTTTaGGCTCTCCAAATCCAAGCA +
Preference number: 5 (lower is better)
Translates to: NVNTIHQEVPLLLYIACKNQLYF*ALQIQA
Trigger: TGCTTGGATTTGGAGAGCCAAAAAATAAAGCTGATT...TTTACAGGCAATGTACAGCAACAGAGGTACCTCTTGGTGTATAGTATTTACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS-3UTR CAA 90 bp CTGTACATTGCCTGTAAATGCTTCAAACACAGGGTCTCAAATGTGATAATCATTGATGTAATGGCCACTTaGACTAAAAACTGTATTCCT +
Preference number: 5 (lower is better)
Translates to: LYIACKCFKHRVSNVIIIDVMAT*TKNCIP
Trigger: AGGAATACAGTTTTTAGTCAAAGTGGCCATTACATC...AATGATTATCACATTTGAGACCCTGTGTTTGAAGCATTTACAGGCAATGTACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
CDS CCA 72 bp CTCCGCTTCTGCGGCGGTGGCGCCTTGGGTTCGGACTaGCTCCTCCCTCCGGGGGTAGTTCGGCGGCCCTCC +
Preference number: 6 (lower is better)
Translates to: LRFCGGGALGSD*LLPPGVVRRPS
Trigger: GGAGGGCCGCCGAACTACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS GCA 72 bp GACAGCCACCGGCGAGTGGGCCATGGAGGCGAATGCTaGCTCGCTCCGCTTCTGCGGCGGTGGCGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: DSHRRVGHGGEC*LAPLLRRWRLG
Trigger: CCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 72 bp GGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGTaGCGCCTTGGGTTCGGACTGGCTCCTCCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: GGECCLAPLLRR*RLGFGLAPPSG
Trigger: CCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CAA 90 bp ATGGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCGGTGGCGCCTaGGGTTCGGACTGGCTCCTCCCTCCGGGGGTAGTTCGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: MEANAASLRFCGGGA*GSDWLLPPGVVRRP
Trigger: GGGCCGCCGAACTACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS GCA 72 bp TGGGCCATGGAGGCGAATGCTGCCTCGCTCCGCTTCTaGGGCGGTGGCGCCTTGGGTTCGGACTGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: WAMEANAASLRF*GGGALGSDWLL
Trigger: GAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 72 bp TCCCAGGCACTTGGACAGCCACCGGCGAGTGGGCCATaGAGGCGAATGCTGCCTCGCTCCGCTTCTGCGGCG +
Preference number: 6 (lower is better)
Translates to: SQALGQPPASGP*RRMLPRSASAA
Trigger: CGCCGCAGAAGCGGAGCGAGGCAGCATTCGCCTCCATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CAA 72 bp AATGCTGCCTCGCTCCGCTTCTGCGGCGGTGGCGCCTaGGGTTCGGACTGGCTCCTCCCTCCGGGGGTAGTT +
Preference number: 6 (lower is better)
Translates to: NAASLRFCGGGA*GSDWLLPPGVV
Trigger: AACTACCCCCGGAGGGAGGAGCCAGTCCGAACCCAAGGCGCCACCGCCGCAGAAGCGGAGCGAGGCAGCATT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS TCA 72 bp GCCACAGCAATACTTTTCTCGAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTCTCGTCCTGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: ATAILFSSSSIA*FLLALFSSCAP
Trigger: TGGGGCACAGGACGAGAATAACGCTAGCAGGAATCAGGCGATTGAAGAACTCGAGAAAAGTATTGCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354719.10
CDS CCA 72 bp GTTATTCTCGTCCTGTGCCCCATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTACGGTGGTAAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: VILVLCPILYFL*IRLLSYGGKAP
Trigger: TGGAGCTTTACCACCGTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATGGGGCACAGGACGAGAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354719.10
CDS CCA 72 bp CACAAGATCTTGCTCTGCCCCATTCTGTACTTTCTTTaGATCAGGCTTCTTTCGTACGGTGGTAAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: HKILLCPILYFL*IRLLSYGGKAP
Trigger: TGGAGCTTTACCACCGTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATGGGGCAGAGCAAGATCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS TCA 72 bp GCCACAGCAATACTTTTCTCGAGTTCTTCAATCGCCTaGTTCCTGCTAGCGTTATTCTCGTCCTGCTGTTTA +
Preference number: 6 (lower is better)
Translates to: ATAILFSSSSIA*FLLALFSSCCL
Trigger: TAAACAGCAGGACGAGAATAACGCTAGCAGGAATCAGGCGATTGAAGAACTCGAGAAAAGTATTGCTGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS CAA 72 bp ATAGCAACGACTTGCTGGGTACGGTTATCAATTCCTTaGAAAACTTCCCCAAATGAGCCTTTCCCAATGCGC +
Preference number: 6 (lower is better)
Translates to: IATTCWVRLSIP*KTSPNEPFPMR
Trigger: GCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCGTACCCAGCAAGTCGTTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS GCA 72 bp GCAGGTGTGATTATCATAGACAAACAACTCAGGGTTTaGACAAGATCTTGCTCTGCCCCATTCTGTACTTTC +
Preference number: 6 (lower is better)
Translates to: AGVIIIDKQLRV*TRSCSAPFCTF
Trigger: GAAAGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAACCCTGAGTTGTTTGTCTATGATAATCACACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS CCA 72 bp AGGATTGTTTTTGGGAATAAGAAACAGAACTCTCATTaGATGCATATCGGAGTTAGGTGGCTCTCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RIVFGNKKQNSH*MHIGVRWLSLG
Trigger: GCCAAGGGAGAGCCACCTAACTCCGATATGCATCCAATGAGAGTTCTGTTTCTTATTCCCAAAAACAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CAA 72 bp TGCAGGTGTGATTATCATAGACAAACAACTCAGGGTTaGCACAAGATCTTGCTCTGCCCCATTCTGTACTTT +
Preference number: 6 (lower is better)
Translates to: CRCDYHRQTTQG*HKILLCPILYF
Trigger: AAAGTACAGAATGGGGCAGAGCAAGATCTTGTGCAAACCCTGAGTTGTTTGTCTATGATAATCACACCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
ENST00000496850.1
CDS GCA 72 bp GCTTCCTCAAGGTCTATGATTTTAATAGCAACGACTTaGTGGGTACGGTTATCAATTCCTTTGAAAACTTCC +
Preference number: 6 (lower is better)
Translates to: ASSRSMILIATT*WVRLSIPLKTS
Trigger: GGAAGTTTTCAAAGGAATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAAATCATAGACCTTGAGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS CAA 72 bp GGCTTCCTCAAGGTCTATGATTTTAATAGCAACGACTaGCTGGGTACGGTTATCAATTCCTTTGAAAACTTC +
Preference number: 6 (lower is better)
Translates to: GFLKVYDFNSND*LGTVINSFENF
Trigger: GAAGTTTTCAAAGGAATTGATAACCGTACCCAGCAAGTCGTTGCTATTAAAATCATAGACCTTGAGGAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000481105.5
ENST00000496850.1
CDS CAA 72 bp AGAAGTTCTTTTGCTGTAGGACGAAATGATGGATCTTaGTTCAGGCAAGCATCAATAAACTCCTTAAAAGAC +
Preference number: 6 (lower is better)
Translates to: RSSFAVGRNDGS*FRQASINSLKD
Trigger: GTCTTTTAAGGAGTTTATTGATGCTTGCCTGAACAAAGATCCATCATTTCGTCCTACAGCAAAAGAACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5
CDS CCA 72 bp CTCCTTAAAAGACTTAGTAAAGTCTCCAACAAGAGTTaGAGGATTGTTTTTGGGAATAAGAAACAGAACTCT +
Preference number: 6 (lower is better)
Translates to: LLKRLSKVSNKS*RIVFGNKKQNS
Trigger: AGAGTTCTGTTTCTTATTCCCAAAAACAATCCTCCAACTCTTGTTGGAGACTTTACTAAGTCTTTTAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354719.10
ENST00000394334.7
ENST00000394335.6
ENST00000481105.5