RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK25 (Homo sapiens)

Ensembl gene IDs: ENSG00000115694

Ensembl transcript IDs: ENST00000316586.9, ENST00000401869.5, ENST00000403346.7, ENST00000405585.5, ENST00000405883.7, ENST00000413760.5, ENST00000420551.1, ENST00000423004.5, ENST00000424537.5, ENST00000426941.1, ENST00000429279.5, ENST00000435225.5, ENST00000436402.5, ENST00000436917.5, ENST00000439101.5, ENST00000440109.5, ENST00000442307.5, ENST00000450497.5, ENST00000452891.5, ENST00000461760.1, ENST00000462953.1, ENST00000465009.1, ENST00000470438.5, ENST00000472181.1, ENST00000478403.5, ENST00000479442.1, ENST00000483603.5, ENST00000487962.5, ENST00000492127.5, ENST00000494699.1, ENST00000495143.5, ENST00000495372.1, ENST00000496159.1, ENST00000535007.5, ENST00000543554.5

Found 892 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTaGAGCCCCGCATGGCCCGGGCCCCACCACACACACCTGCATGTC +
Preference number: 1 (lower is better)
Translates to: LPSLRAVMRTRDQGR*SPAWPGPHHTHLHV
Trigger: GACATGCAGGTGTGTGTGGTGGGGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGGAGGGCAGTGGGCATAGAGAACAGC +
Preference number: 1 (lower is better)
Translates to: AHEGHAGGWSPREQY*WARRGRRAVGIENS
Trigger: GCTGTTCTCTATGCCCACTGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR CCA 90 bp TCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: SAEDPGVAHEGHAGG*SPREQYCWARRGRR
Trigger: CCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR CCA 90 bp AGCACAAGATGGCTCACTGGTCTGATGGCCGCCCTCTCCTCCAGGTaGATGGAGGTGATCCAGGGGGCCAGCAGCTCAGCCGGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: STRWLTGLMAALSSR*MEVIQGASSSAGRA
Trigger: GGCCCTCCCGGCTGAGCTGCTGGCCCCCTGGATCACCTCCATCCACCTGGAGGAGAGGGCGGCCATCAGACCAGTGAGCCATCTTGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR TCA 90 bp AAGCCACAGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTaGGCAGTGCTCTCGGCATCGGACCAAAGCCTGGGCACACCCTGC +
Preference number: 1 (lower is better)
Translates to: KPQLPGPWLKDADKA*AVLSASDQSLGTPC
Trigger: GCAGGGTGTGCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTGTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 90 bp AGCTCCCAGGCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTaGTCTCGGCATCGGACCAAAGCCTGGGCACACCCTGCCTCTCTC +
Preference number: 1 (lower is better)
Translates to: SSQAPGSKTQTRPEQ*SRHRTKAWAHPASL
Trigger: GAGAGAGGCAGGGTGTGCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp CAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGA +
Preference number: 1 (lower is better)
Translates to: QQHTAGVEGDGDLVT*HVRPTGSDVSLQAR
Trigger: TCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR TCA 90 bp TCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGTGAGGCCCACGGGATCCGACGTGTC +
Preference number: 1 (lower is better)
Translates to: SLTCTTAHCRGGRRR*PGDLACEAHGIRRV
Trigger: GACACGTCGGATCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR TCA 90 bp GGCCAGGAGAGGGAGGAGGGCAGTGGGCATAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGAC +
Preference number: 1 (lower is better)
Translates to: GQEREEGSGHREQRP*RAQQHTAGVEGDGD
Trigger: GTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCTCCTCCCTCTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR GCA 90 bp ACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTaGGTACCCACTGCCAGGACCCTCTCAGACAAGCGTGGCACAGCC +
Preference number: 1 (lower is better)
Translates to: TGLEQALEKRPCHTP*VPTARTLSDKRGTA
Trigger: GGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 90 bp TCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTaGCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAG +
Preference number: 1 (lower is better)
Translates to: SLPRTGLEQALEKRP*HTPCVPTARTLSDK
Trigger: CTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp CCGTGGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCAGAGGAATaGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCCGTGTCCCTA +
Preference number: 1 (lower is better)
Translates to: PWAFVRATVVQVAEE*AFPVATQPLEPVSL
Trigger: TAGGGACACGGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 90 bp GACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTaGAGGTCACAGCTAAACAAGTCTGGCAGAAGCCACGCTTGTTCC +
Preference number: 1 (lower is better)
Translates to: DLPSGEPSGSPRGLP*RSQLNKSGRSHACS
Trigger: GGAACAAGCGTGGCTTCTGCCAGACTTGTTTAGCTGTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 90 bp GCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTaGCAGGACCCTCTCAGACAAGCGTGGCACAGCCATGCTGACCTT +
Preference number: 1 (lower is better)
Translates to: ASTGKEALPYTLRTH*QDPLRQAWHSHADL
Trigger: AAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp CCATACACCCTGCGTACCCACTGCCAGGACCCTCTCAGACAAGCGTaGCACAGCCATGCTGACCTTCCATCTGGTGAACCAAGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: PYTLRTHCQDPLRQA*HSHADLPSGEPSGS
Trigger: GCTGCCACTTGGTTCACCAGATGGAAGGTCAGCATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 90 bp TGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTaGCACCGTTGTGCAGGTAGCAGAGGAATGGGCATTCCCTGTGGC +
Preference number: 1 (lower is better)
Translates to: CEQGNWLPWPVGICT*HRCAGSRGMGIPCG
Trigger: GCCACAGGGAATGCCCATTCCTCTGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp GCATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTaGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTTCGAAG +
Preference number: 1 (lower is better)
Translates to: ASPHLHSPLPALFFR*AKQSPGIRHREVSK
Trigger: CTTCGAAACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR CCA 90 bp CAGCAGGACACAGAGGTGACCTCTGTCCTGAGGCTTCTCAACAGATaGGAAGTGGCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAG +
Preference number: 1 (lower is better)
Translates to: QQDTEVTSVLRLLNR*EVAVVSLDPHWHQQ
Trigger: CTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCACTTCCCATCTGTTGAGAAGCCTCAGGACAGAGGTCACCTCTGTGTCCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp CACACCCTGTGCTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTaGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCAGAGGAATGG +
Preference number: 1 (lower is better)
Translates to: HTLCCVNRETGSLGP*AFVRATVVQVAEEW
Trigger: CCATTCCTCTGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAGCACAGGGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp TTGCCCACACACCCTGTGCTGTGTGAACAGGGAAACTGGCTCCCTTaGCCCGTGGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCAGA +
Preference number: 1 (lower is better)
Translates to: LPTHPVLCEQGNWLP*PVGICTCHRCAGSR
Trigger: TCTGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAGCACAGGGTGTGTGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp GTCCCATATCCTGGGTTGTTCTTGGGACAGTGTCTGAGCACAAGATaGCTCACTGGTCTGATGGCCGCCCTCTCCTCCAGGTGGATGGAG +
Preference number: 1 (lower is better)
Translates to: VPYPGLFLGQCLSTR*LTGLMAALSSRWME
Trigger: CTCCATCCACCTGGAGGAGAGGGCGGCCATCAGACCAGTGAGCCATCTTGTGCTCAGACACTGTCCCAAGAACAACCCAGGATATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 90 bp AAGTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTaGCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTG +
Preference number: 1 (lower is better)
Translates to: KSPCALGGWGRLIYY*PAFLPTGSRWATAL
Trigger: CAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR CCA 90 bp CCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATaGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAATCCCA +
Preference number: 1 (lower is better)
Translates to: PPAAGLQREHPQGGR*HTQRLCFQAPVQIP
Trigger: TGGGATTTGAACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 90 bp TTCTGTTTGTTCTTCTACAAAACTCATCAGGTACTGGAGTTTCACTaGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTG +
Preference number: 1 (lower is better)
Translates to: FCLFFYKTHQVLEFH*SPMQVMLADRHLTL
Trigger: CAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAGTACCTGATGAGTTTTGTAGAAGAACAAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp CCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCTGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 2 (lower is better)
Translates to: PGGQQLSREGPKHRAGWPWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...GGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCTGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 2 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: ASLPLLGYSVSIPREADGPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR TCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 2 (lower is better)
Translates to: GGWSPREQYCWARRGRRAGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 2 (lower is better)
Translates to: CCDEDSGPGTLQPRMARADPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: AHEGHAGGWSPREQYCWATASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: CCDEDSGPGTLQPRMARARRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 2 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR TCA 90 bp GAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: EKCASLERGAAQATAPRPRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...GGGCCTGGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR TCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTCCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 2 (lower is better)
Translates to: GGWSPREQYCWARRGRRADPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCCACCAGCAGTGTGGGTaGGCCTCATGTAACATCTGG +
Preference number: 2 (lower is better)
Translates to: ASLPLLGYSVSIPREADGHQQCG*ASCNIW
Trigger: CCAGATGTTACATGAGGCCCACCCACACTGCTGGTG...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR TCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 2 (lower is better)
Translates to: GGWSPREQYCWARRGRRAREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR TCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCAGCCTCCTGAGTAACTaGGATTACAGGCATGCACGC +
Preference number: 2 (lower is better)
Translates to: ASLPLLGYSVSIPREADGSLLSN*DYRHAR
Trigger: GCGTGCATGCCTGTAATCTCAGTTACTCAGGAGGCT...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 2 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp GTGCAGGTAGCAGAGGAATGGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCCCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: VQVAEEWAFPVATQPLEPPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...GGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCGCTTGTCCCATATCCTaGGTTGTTCTTGGGACAGTG +
Preference number: 2 (lower is better)
Translates to: ASLPLLGYSVSIPREADGACPIS*VVLGTV
Trigger: CACTGTCCCAAGAACAACCCAGGATATGGGACAAGC...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR TCA 90 bp GTGCAGGTAGCAGAGGAATGGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCCGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 2 (lower is better)
Translates to: VQVAEEWAFPVATQPLEPGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...GGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp GTGCAGGTAGCAGAGGAATGGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCCCCCAGGGGCCTGCCCTaGAGGTCACAGCTAAACAAG +
Preference number: 2 (lower is better)
Translates to: VQVAEEWAFPVATQPLEPPRGLP*RSQLNK
Trigger: CTTGTTTAGCTGTGACCTGCAGGGCAGGCCCCTGGG...GGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp GCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTCATCGGACCAAAGCCTaGGCACACCCTGCCTCTCTC +
Preference number: 2 (lower is better)
Translates to: AVVSLDPHWHQQCGWASCHRTKA*AHPASL
Trigger: GAGAGAGGCAGGGTGTGCCCAGGCTTTGGTCCGATG...ACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp GAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 2 (lower is better)
Translates to: EKCASLERGAAQATAPRPDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...GGGCCTGGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp GGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCTGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 2 (lower is better)
Translates to: GPGKNVRVLSAEPLKPQLCTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...GAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 2 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACCAGCATCTCCCCACCTaGATTCTCCTCTGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHQHLPT*ILLCLL
Trigger: GAGCAGGCAGAGGAGAATGCAGGTGGGGAGATGCTG...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATAC +
Preference number: 2 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWGHAGG*SPREQY
Trigger: GTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCC...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR TCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 2 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR TCA 90 bp TGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTGCTCACCTGTGATGGCTCACTGGTCTaGTGGCCGCCCTCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: WSPMQVMLADRHLTLLTCDGSLV*WPPSPP
Trigger: TGGAGGAGAGGGCGGCCATCAGACCAGTGAGCCATC...ACAGGTGAGCAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 2 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTGCCCTCTCCTCCAGGTaGATGGAGGTGATCCAGGGG +
Preference number: 2 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFALSSR*MEVIQG
Trigger: CCCCTGGATCACCTCCATCCACCTGGAGGAGAGGGC...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGGCATTCTCCTCTGCCTaGTCTGTTCTTCCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWAFSSA*SVLPVG
Trigger: GCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGC...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp CCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAAACCAAAGTCCCCCTGTaGCCTGGGAGGGTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: PREADGIHKDYVFKLQFKTKVPL*PGRVGP
Trigger: CGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGT...TTTGAACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR TCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: YYCPAFLPTGSRWATALFLCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: YYCPAFLPTGSRWATALFPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 2 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp CAACCTGCCCAGGTTTGGACACAACTACAAAGAACAGCAGGACACAGAGGTGACGCTCTGTTCTTCCGGTaGGCCAAGCAGAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: QPAQVWTQLQRTAGHRGDALFFR*AKQSPG
Trigger: TCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC...GTCACCTCTGTGTCCTGCTGTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCAGCTCCCAGGCCCCTaGCTCAAAGACGCAGACAAG +
Preference number: 2 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTQLPGP*LKDADK
Trigger: CTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTG...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACAGGCTTCTCAACAGATaGGAAGTGGCTGTGGTCTCA +
Preference number: 2 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHRLLNR*EVAVVS
Trigger: TGAGACCACAGCCACTTCCCATCTGTTGAGAAGCCT...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR TCA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 2 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 2 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCACAAGATGGCTCACTaGTCTGATGGCCGCCCTCTC +
Preference number: 2 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTHKMAH*SDGRPL
Trigger: GAGAGGGCGGCCATCAGACCAGTGAGCCATCTTGTG...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGTGTCTGAGCACAAGATaGCTCACTGGTCTGATGGCC +
Preference number: 2 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWCLSTR*LTGLMA
Trigger: GGCCATCAGACCAGTGAGCCATCTTGTGCTCAGACA...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 2 (lower is better)
Translates to: YYCPAFLPTGSRWATALFTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 2 (lower is better)
Translates to: YYCPAFLPTGSRWATALFRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGCATTCTCCTCTGCCTaGTCTGTTCTTCCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: FITAQHSFQREVDGRLLCAFSSA*SVLPVG
Trigger: GCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 2 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR GCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 2 (lower is better)
Translates to: FITAQHSFQREVDGRLLCSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR CAA 90 bp TTTAACCCTTCTTTTGTCCTGCTTGTCCCATATCCTGGGTTGTTCTaGGGACAGTGTCTGAGCACAAGATGGCTCACTGGTCTGATGGCC +
Preference number: 2 (lower is better)
Translates to: FNPSFVLLVPYPGLF*GQCLSTRWLTGLMA
Trigger: GGCCATCAGACCAGTGAGCCATCTTGTGCTCAGACACTGTCCCAAGAACAACCCAGGATATGGGACAAGCAGGACAAAAGAAGGGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 2 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR-3UTR CCA 90 bp TGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTGCTCACCTGTCAACCTGCCCAGGTTTaGACACAACTACAAAGAACA +
Preference number: 2 (lower is better)
Translates to: WSPMQVMLADRHLTLLTCQPAQV*TQLQRT
Trigger: TGTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTG...ACAGGTGAGCAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CAA 90 bp CAGGTTTTTAACCCTTCTTTTGTCCTGCTTGTCCCATATCCTGGGTaGTTCTTGGGACAGTGTCTGAGCACAAGATGGCTCACTGGTCTG +
Preference number: 2 (lower is better)
Translates to: QVFNPSFVLLVPYPG*FLGQCLSTRWLTGL
Trigger: CAGACCAGTGAGCCATCTTGTGCTCAGACACTGTCCCAAGAACAACCCAGGATATGGGACAAGCAGGACAAAAGAAGGGTTAAAAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR GCA 90 bp GATACAATCTTGGCTCACTATAACCTGCACCTCCAGGGTTCAAGCGATTCTTCTCGTCTAATTTATTACTaGCCAGCATTCCTTCCAACG +
Preference number: 2 (lower is better)
Translates to: DTILAHYNLHLQGSSDSSRLIYY*PAFLPT
Trigger: CGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACG...AGAAGAATCGCTTGAACCCTGGAGGTGCAGGTTATAGTGAGCCAAGATTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp GGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTaGAGGATGGCCCCCAACCCTCCTCAGGGCTGGAGG +
Preference number: 3 (lower is better)
Translates to: GPAAQPGGPQAS*RMAPNPPQGWR
Trigger: CCTCCAGCCCTGAGGAGGGTTGGGGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp CTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTaGAGCCCCGCATGGCCCGGGCCCCACCACACACAC +
Preference number: 3 (lower is better)
Translates to: LRAVMRTRDQGR*SPAWPGPHHTH
Trigger: GTGTGTGTGGTGGGGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR CCA 72 bp GACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: DPGVAHEGHAGG*SPREQYCWARR
Trigger: TCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR CCA 72 bp TGGCTCACTGGTCTGATGGCCGCCCTCTCCTCCAGGTaGATGGAGGTGATCCAGGGGGCCAGCAGCTCAGCC +
Preference number: 3 (lower is better)
Translates to: WLTGLMAALSSR*MEVIQGASSSA
Trigger: GGCTGAGCTGCTGGCCCCCTGGATCACCTCCATCCACCTGGAGGAGAGGGCGGCCATCAGACCAGTGAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp ACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGATCCGACGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: TAGVEGDGDLVT*HVRPTGSDVSL
Trigger: CAGGGACACGTCGGATCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR TCA 72 bp CAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTaGGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: QLSGALGKMCES*ARSRSSHSSQA
Trigger: GGCCTGGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp GCCCCTGGCTCAAAGACGCAGACAAGGCCTGAGCAGTaGTCTCGGCATCGGACCAAAGCCTGGGCACACCCT +
Preference number: 3 (lower is better)
Translates to: APGSKTQTRPEQ*SRHRTKAWAHP
Trigger: AGGGTGTGCCCAGGCTTTGGTCCGATGCCGAGAGCACTGCTCAGGCCTTGTCTGCGTCTTTGAGCCAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp AACCCAGCCCCTGGAACCCGTGTCCCTATGCTGTCTTaGAGGATGACTACCCACTGGCCAGCCTCCCGCTGC +
Preference number: 3 (lower is better)
Translates to: NPAPGTRVPMLS*RMTTHWPASRC
Trigger: GCAGCGGGAGGCTGGCCAGTGGGTAGTCATCCTGCAAGACAGCATAGGGACACGGGTTCCAGGGGCTGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR TCA 72 bp AGGGAGGAGGGCAGTGGGCATAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACTGCAGGGGTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: REEGSGHREQRP*RAQQHTAGVEG
Trigger: TCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
3UTR GCA 72 bp GGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTaGCAGGACCCTCTCAGACAAGCGTGGCACAGCCAT +
Preference number: 3 (lower is better)
Translates to: GKEALPYTLRTH*QDPLRQAWHSH
Trigger: ATGGCTGTGCCACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp AGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTaGCATACACCCTGCGTACCCACTGCCAGGACCCTC +
Preference number: 3 (lower is better)
Translates to: RTGLEQALEKRP*HTPCVPTARTL
Trigger: GAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp GTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTaGGCCTCATGTAACATCTGGGAGGGGCTTCATCCC +
Preference number: 3 (lower is better)
Translates to: VSLDPHWHQQCG*ASCNIWEGLHP
Trigger: GGGATGAAGCCCCTCCCAGATGTTACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp GAGCAAGCACTGGAAAAGAGGCCCTGCCATACACCCTaGGTACCCACTGCCAGGACCCTCTCAGACAAGCGT +
Preference number: 3 (lower is better)
Translates to: EQALEKRPCHTP*VPTARTLSDKR
Trigger: ACGCTTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGTGCTTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp CCTGGGTTGTTCTTGGGACAGTGTCTGAGCACAAGATaGCTCACTGGTCTGATGGCCGCCCTCTCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: PGLFLGQCLSTR*LTGLMAALSSR
Trigger: CCTGGAGGAGAGGGCGGCCATCAGACCAGTGAGCCATCTTGTGCTCAGACACTGTCCCAAGAACAACCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp CAGAGGAATGGGCATTCCCTGTGGCAACCCAGCCCCTaGAACCCGTGTCCCTATGCTGTCTTGCAGGATGAC +
Preference number: 3 (lower is better)
Translates to: QRNGHSLWQPSP*NPCPYAVLQDD
Trigger: GTCATCCTGCAAGACAGCATAGGGACACGGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp TTTGTACGTGCCACCGTTGTGCAGGTAGCAGAGGAATaGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCC +
Preference number: 3 (lower is better)
Translates to: FVRATVVQVAEE*AFPVATQPLEP
Trigger: GGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCACAACGGTGGCACGTACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp CACCCTGTGCTGTGTGAACAGGGAAACTGGCTCCCTTaGCCCGTGGGCATTTGTACGTGCCACCGTTGTGCA +
Preference number: 3 (lower is better)
Translates to: HPVLCEQGNWLP*PVGICTCHRCA
Trigger: TGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAGCACAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp TTGCCCACACACCCTGTGCTGTGTGAACAGGGAAACTaGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCAC +
Preference number: 3 (lower is better)
Translates to: LPTHPVLCEQGN*LPWPVGICTCH
Trigger: GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAGCACAGGGTGTGTGGGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp GGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTaGCACCGTTGTGCAGGTAGCAGAGGAATGGGCATT +
Preference number: 3 (lower is better)
Translates to: GNWLPWPVGICT*HRCAGSRGMGI
Trigger: AATGCCCATTCCTCTGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp TGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTaGCCAGCATTCCTTCCAACGGGAAGTAGATGGGCG +
Preference number: 3 (lower is better)
Translates to: CALGGWGRLIYY*PAFLPTGSRWA
Trigger: CGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
3UTR CCA 72 bp ACAGAGGTGACCTCTGTCCTGAGGCTTCTCAACAGATaGGAAGTGGCTGTGGTCTCACTGGATCCCCACTGG +
Preference number: 3 (lower is better)
Translates to: TEVTSVLRLLNR*EVAVVSLDPHW
Trigger: CCAGTGGGGATCCAGTGAGACCACAGCCACTTCCCATCTGTTGAGAAGCCTCAGGACAGAGGTCACCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR-3UTR CAA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGAAAAATGTGCGAGTCTaGAGCGCGGAGCCGCTCAAG +
Preference number: 3 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWKNVRV*SAEPLK
Trigger: CTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTT...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp AAGCAGAAACCAAAGTCCCCCTGTGCCCTGGGAGGGTaGGGCCGTCTAATTTATTACTGCCCAGCATTCCTT +
Preference number: 3 (lower is better)
Translates to: KQKPKSPCALGG*GRLIYYCPAFL
Trigger: AAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGTTTCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp GGGGGAAGGAGGAATGACGCTCAACCTGCCCAGGTTTaGACACAACTACAAAGAACAGCAGGACACAGAGGT +
Preference number: 3 (lower is better)
Translates to: GGRRNDAQPAQV*TQLQRTAGHRG
Trigger: ACCTCTGTGTCCTGCTGTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTGAGCGTCATTCCTCCTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp GCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATaGCATACACAAAGACTATGTTTTCAAGCTCCAGTT +
Preference number: 3 (lower is better)
Translates to: AGLQREHPQGGR*HTQRLCFQAPV
Trigger: AACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp TTCTTCTACAAAACTCATCAGGTACTGGAGTTTCACTaGAGCCCAATGCAGGTGATGCTAGCAGACAGACAC +
Preference number: 3 (lower is better)
Translates to: FFYKTHQVLEFH*SPMQVMLADRH
Trigger: GTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAGTACCTGATGAGTTTTGTAGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR GCA 72 bp TATTGTGCACAGGGAAAGGGAACTCACTTTACTTGGTaGCTGGAATGTCACTCTAGGTTTTTAACATGCTTC +
Preference number: 3 (lower is better)
Translates to: YCAQGKGTHFTW*LECHSRFLTCF
Trigger: GAAGCATGTTAAAAACCTAGAGTGACATTCCAGGCACCAAGTAAAGTGAGTTCCCTTTCCCTGTGCACAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CCA 72 bp CTTTATTGTGCACAGGGAAAGGGAACTCACTTTACTTaGTGCCTGGAATGTCACTCTAGGTTTTTAACATGC +
Preference number: 3 (lower is better)
Translates to: LYCAQGKGTHFT*CLECHSRFLTC
Trigger: GCATGTTAAAAACCTAGAGTGACATTCCAGGCACCAAGTAAAGTGAGTTCCCTTTCCCTGTGCACAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: PGGQQLSREGPKHRAGWPPGGEP*PRRLRP
Trigger: GGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGG...GGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTGG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCCCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGCCCCAGGAGGCGTCTaGATCCCGCGGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAAPGGV*IPRRGA
Trigger: CGCGCCTCTCCGCGGGATCCAGACGCCTCCTGGGGC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCPGGEP*PRRLRP
Trigger: GGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGG...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGCAAATCCCCGGAGGTaGGCCATGGCCGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCANPRR*AMAAPP
Trigger: AGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGCAAATCCCCGGAGGTaGGCCATGGCCGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAANPRR*AMAAPP
Trigger: AGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWARLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGCCCCAGGAGGCGTCTaGATCCCGCGGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSAPGGV*IPRRGA
Trigger: CGCGCCTCTCCGCGGGATCCAGACGCCTCCTGGGGC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAGHAGG*SPREQY
Trigger: GTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCGHAGG*SPREQY
Trigger: GTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGCAAATCCCCGGAGGTaGGCCATGGCCGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSANPRR*AMAAPP
Trigger: AGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCACCTCGGCTGCCTCTTaGCGGGCTCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWATSAAS*RAPQAS
Trigger: AGAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCCCAGGTGGATGGAGGTaGTCCAGGGGGCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ASLPLLGYSVSIPREADGPGGWR*SRGPAA
Trigger: AGCTGCTGGCCCCCTGGATCACCTCCATCCACCTGG...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCACGCGCCCAGGACAGTaGCTGCTGCTGGAAGCCGTC +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWATRPGQ*LLLEAV
Trigger: GACGGCTTCCAGCAGCAGTCACTGTCCTGGGCGCGT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAHWDLG*LLTGSA
Trigger: TGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCTGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHPGGEP*PRRLRP
Trigger: GGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGG...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCGCTTCAGGAGCTCCTTaGCCGTGGGCCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAASGAP*PWAGIG
Trigger: CCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGC...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGGGGGAACGTCCAGATaGGGCCCTGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAGGTSR*GPAPRP
Trigger: AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSRAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCACCTCGGCTGCCTCTTaGCGGGCTCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCTSAAS*RAPQAS
Trigger: AGAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWALCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWALDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCHWDLG*LLTGSA
Trigger: TGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTG...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGGGGGAACGTCCAGATaGGGCCCTGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSGGTSR*GPAPRP
Trigger: AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWASVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARASVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHRAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQGHAGG*SPREQY
Trigger: GTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCC...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCGCTCTGTTCTTCCGGTaGGCCAAGCAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGGQQLSREGPKHRAGWPALFFR*AKQSPG
Trigger: TCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC...GGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWALAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCACTCCTCGGCCAGGCTaGAGGCGTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCTPRPG*RRSPAP
Trigger: AGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGGGGAAGGAGGAATaGCGCTCAACCTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWARGKEE*RSTCPG
Trigger: ACCTGGGCAGGTTGAGCGTCATTCCTCCTTCCCCCT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp CCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCTGCTGTCTTGCAGGATaGCTACCCACTGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PGGQQLSREGPKHRAGWPCCLAG*LPTGQP
Trigger: AGGCTGGCCAGTGGGTAGTCATCCTGCAAGACAGCA...GGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGGCCCTCACTCTCCATaGTGGCTCAGCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAGPHSP*WLSTGD
Trigger: GTCACCTGTGCTGAGCCATCATGGAGAGTGAGGGCC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGTCTGTGAGCTGCCCTaGTACCCCAAAGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAVCELP*YPKVRQ
Trigger: CTGGCGGACTTTGGGGTAGCAGGGCAGCTCACAGAC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRALDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCTCAGCTTGTCTGAGATaGCGGGGCAGGACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARASACLR*RGRTPR
Trigger: CCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGA...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCCTGGAAAAGAGGCCCTaGCATACACCCTGCGTACCC +
Preference number: 4 (lower is better)
Translates to: PGGQQLSREGPKHRAGWPLEKRP*HTPCVP
Trigger: GGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAG...GGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTGCGA +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHRLARP*GVSPLR
Trigger: TCGCAGTGGACTGACGCCGCAGGGGCGAGCTAGCCG...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401869.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGCGAAGCAACGGTGGTaGCGGCAGCGACCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAAKQRW*RQRPEK
Trigger: TTTCTCCGGTCGCTGCCGCCACCACCGTTGCTTCGC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316586.9
ENST00000403346.7
ENST00000405585.5
ENST00000535007.5
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCAAGGGCTTGCTGTGCTaGCCCTCCAGTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCKGLLC*PSSVGG
Trigger: CCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRASVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGCCCTCTCCTCCAGGTaGATGGAGGTGATCCAGGGG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCALSSR*MEVIQG
Trigger: CCCCTGGATCACCTCCATCCACCTGGAGGAGAGGGC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCTGCTGGAAGCCGTCATaGCACTCCCCAGGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSCWKPS*HSPGSG
Trigger: CCCGGACCCTGGGGAGTGCCATGACGGCTTCCAGCA...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGCCAAAGTAGCGGGTaGTGTAGGGGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWASQSSG*CRGCRT
Trigger: AGTGCGACAGCCCCTACATCACCCGCTACTTTGGCT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCATCGGGGGTCTTTGTTaGGGCAGGCCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAIGGLC*GRPPRT
Trigger: AGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGAT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCCTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCLAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSLCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWACVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSLDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCACGCTCCCGCCGCTCTaGTTGTGCTTCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWATLPPL*LCFSLS
Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCATCAGCTTGTCTGAGATaGCGGGGCAGGACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRASACLR*RGRTPR
Trigger: CCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGA...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGCTGCCGTCTCTGCGTaGTGTGATGAGGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCAAVSA*CDEDSG
Trigger: TCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCGCATTCTCCTCTGCCTaGTCTGTTCTTCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAAFSSA*SVLPVG
Trigger: GCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGC...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCCAGCATCTCCCCACCTaGATTCTCCTCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAQHLPT*ILLCLL
Trigger: GAGCAGGCAGAGGAGAATGCAGGTGGGGAGATGCTG...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACCCAGGGGCCTGCCCTaGAGGTCACAGCTAAACAAG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAPRGLP*RSQLNK
Trigger: CTTGTTTAGCTGTGACCTGCAGGGCAGGCCCCTGGG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCACCCTGCGTACCCACTaGCAGGACCCTCTCAGACAA +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWATLRTH*QDPLRQ
Trigger: TTGTCTGAGAGGGTCCTGGCAGTGGGTACGCAGGGT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGCCCCAGGAGGCGTCTaGATCCCGCGGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSAPGGV*IPRRGA
Trigger: CGCGCCTCTCCGCGGGATCCAGACGCCTCCTGGGGC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGTGGAGGTCAGAGTTTaGAGGCTCCCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAVEVRV*RLPLGQ
Trigger: CTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCAC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAQSPQS*TPRHAP
Trigger: AGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: GPGKNVRVLSAEPLKPQLRAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...GAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCTGCAGGAGGCAGCCCTaGTCAGCTGCCCATTTCGAT +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARACRRQP*SAAHFD
Trigger: ATCGAAATGGGCAGCTGACCAGGGCTGCCTCCTGCA...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGCTTGGTGCTCTGGTTaGCAAATCCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAAWCSG*QIPGGE
Trigger: CTCACCTCCGGGGATTTGCCAACCAGAGCACCAAGC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCACCAGATGTCAGCCTTaGAGTCGTAGGCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWATRCQP*SRRPTA
Trigger: AGCAGTCGGCCTACGACTTCAAGGCTGACATCTGGT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGCTTGTGCTTCTCTTTaGGCTCTCCGAAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCACASL*ALRRRA
Trigger: GGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGCTTGTGCTTCTCTTTaGGCTCTCCGAAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAACASL*ALRRRA
Trigger: GGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACACTCCTCGGCCAGGCTaGAGGCGTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHTPRPG*RRSPAP
Trigger: AGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHLCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQLCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVRLARP*GVSPLR
Trigger: GCGGAGTGGACTGACGCCGCAGGGGCGAGCTAGCCG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316586.9
ENST00000405883.7
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTCCCCTTGTGAAGCTTaGTGTGTGGACTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCSPCEA*CVDSAG
Trigger: TCCGGCCGAGTCCACACAGCAAGCTTCACAAGGGGA...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCATCCCCTTGTGAAGCTTaGTGTGTGGACTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRASPCEA*CVDSAG
Trigger: TCCGGCCGAGTCCACACAGCAAGCTTCACAAGGGGA...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCATGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRACTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGCTGCCGTCTCTGCGTaGTGTGATGAGGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSAAVSA*CDEDSG
Trigger: TCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGRLARP*GVSPPQ
Trigger: CTGCGGTGGACTGACGCCGCAGGGGCGAGCTAGCCG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403346.7
ENST00000405585.5
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCCCAAGGCTACCTGGTaGGTCCCCGTGCCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVPKATW*VPVPRG
Trigger: CCCACGGGGCACGGGGACGCACCAGGTAGCCTTGGG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKPGGEP*PRRLRP
Trigger: GGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACTCGAGAGTGCTGGTTaGCAAATCCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRALESAG*QIPGGE
Trigger: CTCACCTCCGGGGATTTGCCAACCAGCACTCTCGAG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCTGGGTGGGCTGTTCTTaGGAATCAGGAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARAWVGCS*ESGTGR
Trigger: GCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCA...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVRAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCAGCTCCCAGGCCCCTaGCTCAAAGACGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSQLPGP*LKDADK
Trigger: CTTGTCTGCGTCTTTGAGCCAGGGGCCTGGGAGCTG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCCAGGTAGCAGAGGAATaGGCATTCCCTGTGGCAACC +
Preference number: 4 (lower is better)
Translates to: ASLPLLGYSVSIPREADGQVAEE*AFPVAT
Trigger: GGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTG...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSLPSPI*TAVRFS
Trigger: GCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCSFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRASFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACGTCTGTGAGCTGCCCTaGTACCCCAAAGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHVCELP*YPKVRQ
Trigger: CTGGCGGACTTTGGGGTAGCAGGGCAGCTCACAGAC...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRHWDLG*LLTGSA
Trigger: TGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGCATTCTCCTCTGCCTaGTCTGTTCTTCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSAFSSA*SVLPVG
Trigger: GCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCAGCATCTCCCCACCTaGATTCTCCTCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSQHLPT*ILLCLL
Trigger: GAGCAGGCAGAGGAGAATGCAGGTGGGGAGATGCTG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRLARP*GVSPPQ
Trigger: CTGCGGTGGACTGACGCCGCAGGGGCGAGCTAGCCG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000403346.7
ENST00000405585.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGCGGCGTCAGTCCACTaGGAGGGACACCAGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKAASVH*EGHQGR
Trigger: GCGCCCCTGGTGTCCCTCGCAGTGGACTGACGCCGC...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401869.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: AVVSLDPHWHQQCGWASCGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...ACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHQSPQS*TPRHAP
Trigger: AGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTG...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGGGGGAACGTCCAGATaGGGCCCTGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVGGTSR*GPAPRP
Trigger: AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGGGGGAACGTCCAGATaGGGCCCTGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGGGTSR*GPAPRP
Trigger: AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
64% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGTGCGCTTCAGCGGGTaGATGTCAGGTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCVRFSG*MSGGFC
Trigger: ACAGAAACCACCTGACATCCACCCGCTGAAGCGCAC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKGHAGG*SPREQY
Trigger: GTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCC...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCTGTGCCCTGGGAGGGTaGGGCCGTCTAATTTATTAC +
Preference number: 4 (lower is better)
Translates to: ASLPLLGYSVSIPREADGCALGG*GRLIYY
Trigger: GTAATAAATTAGACGGCCCCACCCTCCCAGGGCACA...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCCACCAGCAGTGTGGGTaGGCCTCATGTAACATCTGG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCHQQCG*ASCNIW
Trigger: CCAGATGTTACATGAGGCCCACCCACACTGCTGGTG...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CAA 72 bp GCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTaGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AAIWGPGKNVRV*SAEPLKPQLPG
Trigger: GCCTGGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CAA 72 bp CAACCCAGCCCCTGGAACCCGTGTCCCTATGCTGTCTaGCAGGATGACTACCCACTGGCCAGCCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QPSPWNPCPYAV*QDDYPLASLPL
Trigger: CAGCGGGAGGCTGGCCAGTGGGTAGTCATCCTGCAAGACAGCATAGGGACACGGGTTCCAGGGGCTGGGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACAGCCAAAGTAGCGGGTaGTGTAGGGGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSQSSG*CRGCRT
Trigger: AGTGCGACAGCCCCTACATCACCCGCTACTTTGGCT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCACCAGATGTCAGCCTTaGAGTCGTAGGCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSTRCQP*SRRPTA
Trigger: AGCAGTCGGCCTACGACTTCAAGGCTGACATCTGGT...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTACCTCGGCTGCCTCTTaGCGGGCTCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSTSAAS*RAPQAS
Trigger: AGAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCAGGACAGTGATCTCCTaGTGGATGTCCTCGATCTCA +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARARTVIS*WMSSIS
Trigger: TGAGATCGAGGACATCCAGCAGGAGATCACTGTCCT...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTTGAAGGGCTTGCTGTaGTGGCCCTCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHLKGLL*WPSSVG
Trigger: ACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTCCCCTTGTGAAGCTTaGTGTGTGGACTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSPCEA*CVDSAG
Trigger: TCCGGCCGAGTCCACACAGCAAGCTTCACAAGGGGA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGACGCTCCCGCCGCTCTaGTTGTGCTTCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQTLPPL*LCFSLS
Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGT...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSTRSTR*TISLSE
Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGT...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCLCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCATTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRALCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAACCAAAGTCCCCCTGTaGCCTGGGAGGGTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: HASSYLGPWEKCASLERGTKVPL*PGRVGP
Trigger: CGGCCCCACCCTCCCAGGGCACAGGGGGACTTTGGT...TCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGGCGAAGCAACGGTGGTaGCGGCAGCGACCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRAKQRW*RQRPEK
Trigger: TTTCTCCGGTCGCTGCCGCCACCACCGTTGCTTCGC...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316586.9
ENST00000403346.7
ENST00000405585.5
ENST00000535007.5
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTCCACTCGAGAGTGCTaGTTGGCAAATCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSTREC*LANPRR
Trigger: CCTCCGGGGATTTGCCAACCAGCACTCTCGAGTGGA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGCTTCAGGAGCTCCTTaGCCGTGGGCCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSASGAP*PWAGIG
Trigger: CCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGCTTCAGGAGCTCCTTaGCCGTGGGCCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVASGAP*PWAGIG
Trigger: CCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGCTTCAGGAGCTCCTTaGCCGTGGGCCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGASGAP*PWAGIG
Trigger: CCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTGGGGGAACGTCCAGATaGGGCCCTGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVGGTSR*GPAPRP
Trigger: AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCC...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCCAACGGGAAGTAGATaGGCGACTGCTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAPTGSR*ATALFT
Trigger: TGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCAGCTATCTGGGGCCCTaGGAAAAATGTGCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CCDEDSGPGTLQPRMARASYLGP*EKCASL
Trigger: AAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCT...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGAACCCTCCTCAGGGCTaGAGGGGATGGTCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRNPPQG*RGWSGG
Trigger: TCCCCCTGACCATCCCCTCCAGCCCTGAGGAGGGTT...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGCTTGTCCCATATCCTaGGTTGTTCTTGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAACPIS*VVLGTV
Trigger: CACTGTCCCAAGAACAACCCAGGATATGGGACAAGC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGGGTCCTGGGTGCTaGTTAATGCACCTGCATTTT +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWARGPGC*LMHLHF
Trigger: AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGGACAGTGACTGCTGCTaGAAGCCGTCATGGCACTCC +
Preference number: 4 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQDSDCC*KPSWHS
Trigger: GGAGTGCCATGACGGCTTCCAGCAGCAGTCACTGTC...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCATCGGGGGTCTTTGTTaGGGCAGGCCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCIGGLC*GRPPRT
Trigger: AGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGAT...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GTGCAGGTAGCAGAGGAATGGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCCAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: VQVAEEWAFPVATQPLEPRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...GGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGACCTCGGCTGCCTCTTaGCGGGCTCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKTSAAS*RAPQAS
Trigger: AGAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATACTCCTCGGCCAGGCTaGAGGCGTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHTPRPG*RRSPAP
Trigger: AGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRHHQLV*DAGAGL
Trigger: GAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGAGGCTGCTGGGCTACAGCGTaGGCATCCCCAGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: AAHFDVRSAPISTHGGGGCWATA*ASPGRP
Trigger: CGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCA...GCCTCCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCCCCAAACGAGCCCTTaGCAATGCGGTCGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRPQTSP*QCGRAW
Trigger: CCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGGTCTGTGAGCTGCCCTaGTACCCCAAAGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRVCELP*YPKVRQ
Trigger: CTGGCGGACTTTGGGGTAGCAGGGCAGCTCACAGAC...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSLDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHLDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQHWDLG*LLTGSA
Trigger: TGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSLSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 4 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGCCCCAGGAGGCGTCTaGATCCCGCGGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEAPGGV*IPRRGA
Trigger: CGCGCCTCTCCGCGGGATCCAGACGCCTCCTGGGGC...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELPGGEP*PRRLRP
Trigger: GGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCACAGTGATCTCCTGCTaGATGTCCTCGATCTCATCC +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCTVISC*MSSISS
Trigger: GGATGAGATCGAGGACATCCAGCAGGAGATCACTGT...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCGTGGAGGTCAGAGTTTaGAGGCTCCCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: EKCASLERGAAQATAPRPVEVRV*RLPLGQ
Trigger: CTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCAC...GGGCCTGGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRRTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTAAGGGCTTGCTGTGCTaGCCCTCCAGTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSKGLLC*PSSVGG
Trigger: CCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRQSPQS*TPRHAP
Trigger: AGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACCAACGGGAAGTAGATaGGCGACTGCTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAPTGSR*ATALFT
Trigger: TGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCATCGGACCAAAGCCTaGGCACACCCTGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRHRTKA*AHPASL
Trigger: GAGAGAGGCAGGGTGTGCCCAGGCTTTGGTCCGATG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCGGCTCCCTTGGCCCGTaGGCATTTGTACGTGCCACC +
Preference number: 4 (lower is better)
Translates to: TGKEALPYTLRTHCQDPLGSLGP*AFVRAT
Trigger: GGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCC...GAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGTACTGGAGTTTCACTaGAGCCCAATGCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCVLEFH*SPMQVM
Trigger: CATCACCTGCATTGGGCTCCAGTGAAACTCCAGTAC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCCGCGCACGGCTCTCTaGGACCCCGAGTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELPRTAL*DPESHR
Trigger: GCGGTGGGACTCGGGGTCCCAGAGAGCCGTGCGCGG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403346.7
ENST00000535007.5
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACCGCGCACGGCTCTCTaGGACCCCGAGTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGPRTAL*DPESHR
Trigger: GCGGTGGGACTCGGGGTCCCAGAGAGCCGTGCGCGG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403346.7
ENST00000535007.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCAAATCCCCGGAGGTaGGCCATGGCCGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGANPRR*AMAAPP
Trigger: AGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGC...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp ACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TGSLGPWAFVRATVVQVACGRAW*RAPQGP
Trigger: TGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCA...TGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATTGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHCGRAW*RAPQGP
Trigger: TGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCA...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSCGRAW*RAPQGP
Trigger: TGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSCGRAW*RAPQGP
Trigger: TGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSIKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSLAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCCTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSLAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHLAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGGCTTGTGCTTCTCTTTaGGCTCTCCGAAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRACASL*ALRRRA
Trigger: GGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGC...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGACTCCTCGGCCAGGCTaGAGGCGTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKTPRPG*RRSPAP
Trigger: AGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCACACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: TGSLGPWAFVRATVVQVAHHQLV*DAGAGL
Trigger: GAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTG...TGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGHHQLV*DAGAGL
Trigger: GAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGACCCAGGCGTAGCTCATaGGGGCCACGCCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRPRRSS*GPRRRL
Trigger: CAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGG...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKLCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCCCCAAACGAGCCCTTaGCAATGCGGTCGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVPQTSP*QCGRAW
Trigger: CCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCATTGTGTGGTTATCGATaGCCTTGTAGACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRALCGYR*PCRPPQ
Trigger: TTGGGGAGGTCTACAAGGGCATCGATAACCACACAA...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGCATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCCTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: VHASSYLGPWEKCASLERLDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...GCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCTGGACTCCTCGCCATaGCCCTCTGACTTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKLDSSP*PSDFQR
Trigger: GCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCTCCCCTTGTGAAGCTTaGTGTGTGGACTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: GPGKNVRVLSAEPLKPQLSPCEA*CVDSAG
Trigger: TCCGGCCGAGTCCACACAGCAAGCTTCACAAGGGGA...GAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGTCAGCTTGTCTGAGATaGCGGGGCAGGACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVSACLR*RGRTPR
Trigger: CCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGA...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGCTGCCGTCTCTGCGTaGTGTGATGAGGACTCGGGA +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSAAVSA*CDEDSG
Trigger: TCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGGTCCGGGAGGGACTTaGAGATCCCAAGGCTACCTG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSGPGGT*RSQGYL
Trigger: CAGGTAGCCTTGGGATCTGCAAGTCCCTCCCGGACC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGTGGAGGTCAGAGTTTaGAGGCTCCCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSVEVRV*RLPLGQ
Trigger: CTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCAC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGTGGAGGTCAGAGTTTaGAGGCTCCCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGVEVRV*RLPLGQ
Trigger: CTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCAC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGGAGGTCAGAGTTTaGAGGCTCCCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHVEVRV*RLPLGQ
Trigger: CTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCAC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVRTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSRTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGAAGGGCTTGCTGTGCTaGCCCTCCAGTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQKGLLC*PSSVGG
Trigger: CCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTT...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHQSPQS*TPRHAP
Trigger: AGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVQSPQS*TPRHAP
Trigger: AGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGAAAGCATGCAGAGGCTTAGTCTTGGGGAGCAAACCCACTCCCACAAGGGGTGGGGGAACGTCCAGATaGGGCCCTGCTCCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: EKACRGLVLGSKPTPTRGGGTSR*GPAPRP
Trigger: AGGACGGGGAGCAGGGCCCCATCTGGACGTTCCCCC...ACCCCTTGTGGGAGTGGGTTTGCTCCCCAAGACTAAGCCTCTGCATGCTTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHSVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKSVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGARAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRARVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTGGCCACGCCGGCGGCTaGAGCCCCCGTGAGCAATAC +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGAGHAGG*SPREQY
Trigger: GTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCC...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGACCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: HASSYLGPWEKCASLERGPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...TCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGTCCCTGCCGAGGACTaGCCTAGAGCAAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVVPAED*PRASTG
Trigger: TCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGAC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGAAGCATCGTGCAGGATaGCCCCCAACCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGKHRAG*PPTLLR
Trigger: CCTGAGGAGGGTTGGGGGCCATCCTGCACGATGCTT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCGCAAATCCCCGGAGGTaGGCCATGGCCGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTANPRR*AMAAPP
Trigger: AGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGC...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATAGCCAAAGTAGCGGGTaGTGTAGGGGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHSQSSG*CRGCRT
Trigger: AGTGCGACAGCCCCTACATCACCCGCTACTTTGGCT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGAGCCAAAGTAGCGGGTaGTGTAGGGGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVSQSSG*CRGCRT
Trigger: AGTGCGACAGCCCCTACATCACCCGCTACTTTGGCT...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTATCGGGGGTCTTTGTTaGGGCAGGCCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSIGGLC*GRPPRT
Trigger: AGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGAT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGCTTGTGCTTCTCTTTaGGCTCTCCGAAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVACASL*ALRRRA
Trigger: GGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQHHQLV*DAGAGL
Trigger: GAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKHHQLV*DAGAGL
Trigger: GAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHLPSPI*TAVRFS
Trigger: GCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACCGGCTGGAGCCCCCGTaGGCAATACTGCTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHRLEPP*AILLGQ
Trigger: CTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCG...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGTCTGTGAGCTGCCCTaGTACCCCAAAGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQVCELP*YPKVRQ
Trigger: CTGGCGGACTTTGGGGTAGCAGGGCAGCTCACAGAC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSCVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCCATCCAGAAGGGGGTaGCCACGAATGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRPSRRG*PRMCSS
Trigger: AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCATTGAAGGGCTTGCTGTaGTGGCCCTCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TGSLGPWAFVRATVVQVALKGLL*WPSSVG
Trigger: ACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAA...TGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGTTGAAGGGCTTGCTGTaGTGGCCCTCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVLKGLL*WPSSVG
Trigger: ACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAA...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTTGAAGGGCTTGCTGTaGTGGCCCTCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSLKGLL*WPSSVG
Trigger: ACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGTCCCCTTGTGAAGCTTaGTGTGTGGACTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVSPCEA*CVDSAG
Trigger: TCCGGCCGAGTCCACACAGCAAGCTTCACAAGGGGA...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWHWDLG*LLTGSA
Trigger: TGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTG...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATACGCTCCCGCCGCTCTaGTTGTGCTTCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHTLPPL*LCFSLS
Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTTCAGCTTGTCTGAGATaGCGGGGCAGGACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVSACLR*RGRTPR
Trigger: CCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGA...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTGCAGGTAGCAGAGGAATGGGCATTCCCTGTGGCAACCCAGCCCCTGGAACCCACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VQVAEEWAFPVATQPLEPTRSTR*TISLSE
Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGT...GGGTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATTCCTCTGCTACCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGCTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGTGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVCTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCGTCTAATTTATTACTaGCCAGCATTCCTTCCAACG +
Preference number: 4 (lower is better)
Translates to: AHEGHAGGWSPREQYCWARLIYY*PAFLPT
Trigger: CGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCACACAAGGGGTCCTGGGTaGTGGTTAATGCACCTGCAT +
Preference number: 4 (lower is better)
Translates to: TFHLVNQVAAPGACPAGHTRGPG*WLMHLH
Trigger: ATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGT...GTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCGCCCCAGGAGGCGTCTaGATCCCGCGGAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: YYCPAFLPTGSRWATALFAPGGV*IPRRGA
Trigger: CGCGCCTCTCCGCGGGATCCAGACGCCTCCTGGGGC...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTCCACTCGAGAGTGCTaGTTGGCAAATCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSSTREC*LANPRR
Trigger: CCTCCGGGGATTTGCCAACCAGCACTCTCGAGTGGA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACACAGTGATCTCCTGCTaGATGTCCTCGATCTCATCC +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHTVISC*MSSISS
Trigger: GGATGAGATCGAGGACATCCAGCAGGAGATCACTGT...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTGCTCTGTTCTTCCGGTaGGCCAAGCAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSIALFFR*AKQSPG
Trigger: TCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGCTCTGTTCTTCCGGTaGGCCAAGCAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQALFFR*AKQSPG
Trigger: TCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTGGCTGTGGTCTCACTaGATCCCCACTGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKWLWSH*IPTGTS
Trigger: GCTGGTGCCAGTGGGGATCCAGTGAGACCACAGCCA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGTCCCTTTTGTATTTTaGTTCTGCCCTCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: GGWSPREQYCWARRGRRAVPFVF*FCPPML
Trigger: AAGCATGGGAGGGCAGAACCAAAATACAAAAGGGAC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCACGGCTGGCAGAAGCTCTaGGTCGTCTTTACCAACTTC +
Preference number: 4 (lower is better)
Translates to: TFHLVNQVAAPGACPAGHGWQKL*VVFTNF
Trigger: GAAGTTGGTAAAGACGACCCAGAGCTTCTGCCAGCC...GTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCACCAGATGTCAGCCTTaGAGTCGTAGGCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: TGKEALPYTLRTHCQDPLTRCQP*SRRPTA
Trigger: AGCAGTCGGCCTACGACTTCAAGGCTGACATCTGGT...GAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGACCAGATGTCAGCCTTaGAGTCGTAGGCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGTRCQP*SRRPTA
Trigger: AGCAGTCGGCCTACGACTTCAAGGCTGACATCTGGT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGATCGGGGGTCTTTGTTaGGGCAGGCCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQIGGLC*GRPPRT
Trigger: AGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGAT...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCACCTCGGCTGCCTCTTaGCGGGCTCCGCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELTSAAS*RAPQAS
Trigger: AGAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQLPSPI*TAVRFS
Trigger: GCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCCCAGTTCAGTCATCTaGGACCGACCTCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELPSSVI*DRPPGR
Trigger: CCGCCCCGGAGGTCGGTCTCAGATGACTGAACTGGG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401869.5
CDS-3UTR GCA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTGTCTCGGTGGATCTTaGGTTCGGAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHCLGGS*VRSADN
Trigger: ATTATCTGCACTCCGAACGCAAGATCCACCGAGACA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVSFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGSFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSICVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCCATCCAGAAGGGGGTaGCCACGAATGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGPSRRG*PRMCSS
Trigger: AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCCATCCAGAAGGGGGTaGCCACGAATGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHPSRRG*PRMCSS
Trigger: AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCGCCGCTCTGCTTGTaGTTCTCTTTGAGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSIPPLCL*FSLSSP
Trigger: CGGAGAGCTCAAAGAGAAGCACAAGCAGAGCGGCGG...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAACGCTCCCGCCGCTCTaGTTGTGCTTCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: HASSYLGPWEKCASLERGTLPPL*LCFSLS
Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGT...TCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGACGCTCCCGCCGCTCTaGTTGTGCTTCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQTLPPL*LCFSLS
Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGT...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSTRSTR*TISLSE
Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGTTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRLCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRLSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTGATCCGACGTGTCCCTaGAGGCACGACATAGCACAG +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVDPTCP*RHDIAQ
Trigger: CTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATC...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGTGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQCTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTTGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSICTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGACAGCGTCCCTGACGTaGACAACAGCACACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKTASLT*TTAHCR
Trigger: CCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGATGGGGGCTGCCCTGTTaGCTCTCCCCACCTCATGGG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGWGLPC*LSPPHG
Trigger: CCCATGAGGTGGGGAGAGGCAACAGGGCAGCCCCCA...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTGCATTCTCCTCTGCCTaGTCTGTTCTTCCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVAFSSA*SVLPVG
Trigger: GCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGC...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTGCTCACCTGTGGGCCCCAAGCATCGTaGAGGATGGCCCCCAACCCT +
Preference number: 4 (lower is better)
Translates to: WSPMQVMLADRHLTLLTCGPQAS*RMAPNP
Trigger: AGGGTTGGGGGCCATCCTGCACGATGCTTGGGGCCC...ACAGGTGAGCAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTATAGTGCCCCCTGTGTaGATTCCCCTAGTGCACCGC +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVIVPPV*IPLVHR
Trigger: GCGGTGCACTAGGGGAATGCACACAGGGGGCACTAT...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR CCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGCCCGCGAAGCAACGGTaGTGGCGGCAGCGACCGGAG +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWPAKQR*WRQRPE
Trigger: CTCCGGTCGCTGCCGCCACCACCGTTGCTTCGCGGG...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316586.9
ENST00000535007.5
CDS-3UTR CCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCCTCCTCCAGGGGACCTaGTTTAAGCAAGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSLLQGT*FKQVQC
Trigger: GCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAG...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCTCCTCCAGGGGACCTaGTTTAAGCAAGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVLLQGT*FKQVQC
Trigger: GCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCTCCTCCAGGGGACCTaGTTTAAGCAAGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGLLQGT*FKQVQC
Trigger: GCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCTCTCCCGCAGGATCGTaGCAATGTATGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GPGKNVRVLSAEPLKPQLSPAGS*QCMSPP
Trigger: TGGAGGAGACATACATTGCCACGATCCTGCGGGAGA...GAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTGGGTGGGCTGTTCTTaGGAATCAGGAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSWVGCS*ESGTGR
Trigger: GCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSIALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGCTTCAGGAGCTCCTTaGCCGTGGGCCGGAATCGGG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEASGAP*PWAGIG
Trigger: CCCGATTCCGGCCCACGGCCAAGGAGCTCCTGAAGC...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCCGGGCCGGACCAGCGTaGACAGGCACTGGGACCTCG +
Preference number: 4 (lower is better)
Translates to: YYCPAFLPTGSRWATALFRAGPA*TGTGTS
Trigger: CGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCG...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGTGCGCTTCAGCGGGTaGATGTCAGGTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGVRFSG*MSGGFC
Trigger: ACAGAAACCACCTGACATCCACCCGCTGAAGCGCAC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGCGCTTCAGCGGGTaGATGTCAGGTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHVRFSG*MSGGFC
Trigger: ACAGAAACCACCTGACATCCACCCGCTGAAGCGCAC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCTCCCATTTCTACTCATaGTGGTGGAGGCAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSSHFYS*WWRQVF
Trigger: GAAAACTTGCCTCCACCACCATGAGTAGAAATGGGA...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACGGAAACTGGCTCCCTTaGCCCGTGGGCATTTGTACG +
Preference number: 4 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHGNWLP*PVGICT
Trigger: CGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCC...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGCTTGGTGCTCTGGTTaGCAAATCCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKAWCSG*QIPGGE
Trigger: CTCACCTCCGGGGATTTGCCAACCAGAGCACCAAGC...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCAAGCAAGTCCAGTGCTaGGCCGCCGCCCAGGTACTC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELKQVQC*AAAQVL
Trigger: GAGTACCTGGGCGGCGGCTCAGCACTGGACTTGCTT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACCTCTGCGCCTTGGTCTaGGCGGCCATAGGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHLCALV*AAIGLH
Trigger: ATGCAGCCCTATGGCCGCTCAGACCAAGGCGCAGAG...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCRLARP*GVSPLR
Trigger: GCGGAGTGGACTGACGCCGCAGGGGCGAGCTAGCCG...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp ACCTTCCATCTGGTGAACCAAGTGGCAGCCCCAGGGGCCTGCCCTGCAGGTCACTTGTGTGGTTATCGATaGCCTTGTAGACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: TFHLVNQVAAPGACPAGHLCGYR*PCRPPQ
Trigger: TTGGGGAGGTCTACAAGGGCATCGATAACCACACAA...GTGACCTGCAGGGCAGGCCCCTGGGGCTGCCACTTGGTTCACCAGATGGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGAGGACAGTGATCTCCTaGTGGATGTCCTCGATCTCA +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRRTVIS*WMSSIS
Trigger: TGAGATCGAGGACATCCAGCAGGAGATCACTGTCCT...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVSFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCCATCCAGAAGGGGGTaGCCACGAATGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQPSRRG*PRMCSS
Trigger: AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCCATCCAGAAGGGGGTaGCCACGAATGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKPSRRG*PRMCSS
Trigger: AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGTCCAGATGGGGCCCTaGTCCCCGTCCTCCGCCTCG +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCVQMGP*SPSSAS
Trigger: CGAGGCGGAGGACGGGGAGCAGGGCCCCATCTGGAC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQTRSTR*TISLSE
Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGT...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATTTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHLCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGLCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSLCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACTGGAAAAGAGGCCCTGCCATACACCCTGCGTACCCACTGCCAGGACCCTCTCCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: TGKEALPYTLRTHCQDPLLSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...GAGAGGGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGGCCTCTTTTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTCCCTGCCATACACCCTaGGTACCCACTGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFPCHTP*VPTART
Trigger: GGTCCTGGCAGTGGGTACGCAGGGTGTATGGCAGGG...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGTGGGCATTTGTACGTaGCACCGTTGTGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKVGICT*HRCAGS
Trigger: GCTACCTGCACAACGGTGGCACGTACAAATGCCCAC...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTGCCCACACACCCTGTaGTGTGTGAACAGGGAAACT +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSCPHTL*CVNRET
Trigger: AGTTTCCCTGTTCACACAGCACAGGGTGTGTGGGCA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATCAGCTGGAGAAAGCATaGAGAGGCTTAGTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHQLEKA*RGLVLG
Trigger: CCCCAAGACTAAGCCTCTGCATGCTTTCTCCAGCTG...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACGCGAAGCAACGGTGGTaGCGGCAGCGACCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHAKQRW*RQRPEK
Trigger: TTTCTCCGGTCGCTGCCGCCACCACCGTTGCTTCGC...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316586.9
ENST00000535007.5
CDS-3UTR CCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTCTCCTCCAGGGGACCTaGTTTAAGCAAGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVLLQGT*FKQVQC
Trigger: GCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAG...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGTCTCCCGCAGGATCGTaGCAATGTATGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVSPAGS*QCMSPP
Trigger: TGGAGGAGACATACATTGCCACGATCCTGCGGGAGA...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTCTCCCGCAGGATCGTaGCAATGTATGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGSPAGS*QCMSPP
Trigger: TGGAGGAGACATACATTGCCACGATCCTGCGGGAGA...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTGGGTGGGCTGTTCTTaGGAATCAGGAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKWVGCS*ESGTGR
Trigger: GCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTAAGGGCTTGCTGTGCTaGCCCTCCAGTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGAKGLLC*PSSVGG
Trigger: CCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTT...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAAAGGGCTTGCTGTGCTaGCCCTCCAGTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGKGLLC*PSSVGG
Trigger: CCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACAAGGGCTTGCTGTGCTaGCCCTCCAGTGTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHKGLLC*PSSVGG
Trigger: CCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTT...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESVDRH*DLGCLL
Trigger: CAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGTGCGCTTCAGCGGGTaGATGTCAGGTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQVRFSG*MSGGFC
Trigger: ACAGAAACCACCTGACATCCACCCGCTGAAGCGCAC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTGGTGACCTGGTGACCTaGCATGTGAGGCCCACGGGA +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGAGDLVT*HVRPTG
Trigger: TCCCGTGGGCCTCACATGCCAGGTCACCAGGTCACC...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCCTCTCCCCACCTCATaGGAGGAGGAGGCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEPLPTS*EEEAEL
Trigger: CAGCTCTGCCTCCTCCTCCCATGAGGTGGGGAGAGG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTAGGCTTCTCAACAGATaGGAAGTGGCTGTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: AVVSLDPHWHQQCGWASCRLLNR*EVAVVS
Trigger: TGAGACCACAGCCACTTCCCATCTGTTGAGAAGCCT...ACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GTGCATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCTGGAGGCAAGTTTTCTaGGCCCTGGAAAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VHASSYLGPWEKCASLERWRQVF*ALERKG
Trigger: GCCCTTCCTTTCCAGGGCCCAGAAAACTTGCCTCCA...GCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCATTTCTACTCATGGTaGTGGAGGCAAGTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQHFYSW*WRQVFW
Trigger: CCAGAAAACTTGCCTCCACCACCATGAGTAGAAATG...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAAGGATGACTACCCACTaGCCAGCCTCCCGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGRMTTH*PASRCW
Trigger: CCAGCAGCGGGAGGCTGGCCAGTGGGTAGTCATCCT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGCGRAW*RAPQGP
Trigger: TGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCA...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACCTCCACGAACTCCTTaGAGGGCTTGCTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGPPRTP*RACCAG
Trigger: GCCAGCACAGCAAGCCCTTCAAGGAGTTCGTGGAGG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGLAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CAACCTGCCCAGGTTTGGACACAACTACAAAGAACAGCAGGACACAGAGGTGACACTCCTCGGCCAGGCTaGAGGCGTTCTCCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QPAQVWTQLQRTAGHRGDTPRPG*RRSPAP
Trigger: AGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGT...GTCACCTCTGTGTCCTGCTGTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGGTGGAAGGAGACGGTaGCCTGGTGACCTGGCATGT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELGGRRR*PGDLAC
Trigger: ACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCGATGGCTCACTGGTCTaGTGGCCGCCCTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTDGSLV*WPPSPP
Trigger: TGGAGGAGAGGGCGGCCATCAGACCAGTGAGCCATC...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTCTTGGGACAGTGTCTaGGCACAAGATGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKSWDSV*AQDGSL
Trigger: CAGTGAGCCATCTTGTGCTCAGACACTGTCCCAAGA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACAGCCTCCTGAGTAACTaGGATTACAGGCATGCACGC +
Preference number: 4 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHSLLSN*DYRHAR
Trigger: GCGTGCATGCCTGTAATCTCAGTTACTCAGGAGGCT...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCGAGCAAGTACACATTTaGAAGGTAATTTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSEQVHI*KVILQE
Trigger: CTCCTGCAAAATTACCTTTCAAATGTGTACTTGCTC...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCCCCAAACGAGCCCTTaGCAATGCGGTCGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEPQTSP*QCGRAW
Trigger: CCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATAGGACAGTGATCTCCTaGTGGATGTCCTCGATCTCA +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHRTVIS*WMSSIS
Trigger: TGAGATCGAGGACATCCAGCAGGAGATCACTGTCCT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWCVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGTGTTCCTCTTAATCTaGGTGTCTGTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVVFLLI*VSVSCP
Trigger: AGGGCAGCTCACAGACACGCAGATTAAGAGGAACAC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGTTCCTCTTAATCTaGGTGTCTGTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHVFLLI*VSVSCP
Trigger: AGGGCAGCTCACAGACACGCAGATTAAGAGGAACAC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCTCAGCTTGTCTGAGATaGCGGGGCAGGACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELSACLR*RGRTPR
Trigger: CCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGA...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTCAGCTTGTCTGAGATaGCGGGGCAGGACTCCTCGG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESACLR*RGRTPR
Trigger: CCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTTGTGTGAAAACCTCTaGACTCGCTCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKLCENL*TRSTRC
Trigger: GCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSILSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGACCCCGTGAGCAATACTaGTGGGCCAGGAGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRPREQY*WARRGR
Trigger: CCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGG...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTGCAGCCCTGGTCAGCTaGCCATTTCGATGTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFAALVS*PFRCPL
Trigger: GAGCGGACATCGAAATGGGCAGCTGACCAGGGCTGC...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGTCCCTATGCTGTCTTaGAGGATGACTACCCACTGG +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQVPMLS*RMTTHW
Trigger: CCAGTGGGTAGTCATCCTGCAAGACAGCATAGGGAC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCACCAGGGGCGCTCGGTaGCCAGTTCAGTCATCTGAG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELTRGAR*PVQSSE
Trigger: CTCAGATGACTGAACTGGGCACCGAGCGCCCCTGGT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401869.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGTCTCCCGCAGGATCGTaGCAATGTATGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQSPAGS*QCMSPP
Trigger: TGGAGGAGACATACATTGCCACGATCCTGCGGGAGA...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTTCTCCCGCAGGATCGTaGCAATGTATGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVSPAGS*QCMSPP
Trigger: TGGAGGAGACATACATTGCCACGATCCTGCGGGAGA...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFRTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELRTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMERTRMG*RSEFGG
Trigger: GCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTGTGCCCTGGGAGGGTaGGGCCGTCTAATTTATTAC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKCALGG*GRLIYY
Trigger: GTAATAAATTAGACGGCCCCACCCTCCCAGGGCACA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCAACCTGCCCAGGTTTaGACACAACTACAAAGAACA +
Preference number: 4 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCQPAQV*TQLQRT
Trigger: TGTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTG...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGTGTCTGAGCACAAGATaGCTCACTGGTCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQCLSTR*LTGLMA
Trigger: GGCCATCAGACCAGTGAGCCATCTTGTGCTCAGACA...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATAAAAACAGTCATGGCTaGCAGAAGCTCTGGGTCGTC +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHKNSHG*QKLWVV
Trigger: GACGACCCAGAGCTTCTGCCAGCCATGACTGTTTTT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGATCCCAAGGCTACCTaGTGCGTCCCCGTGCCCCGT +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWDPKAT*CVPVPR
Trigger: ACGGGGCACGGGGACGCACCAGGTAGCCTTGGGATC...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCATCGGGGGTCTTTGTTaGGGCAGGCCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELIGGLC*GRPPRT
Trigger: AGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGAT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGCTTGTGCTTCTCTTTaGGCTCTCCGAAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELACASL*ALRRRA
Trigger: GGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELLPSPI*TAVRFS
Trigger: GCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMELPSPI*TAVRFS
Trigger: GCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAACACCCTGTGCTGTGTaGACAGGGAAACTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGTPCAV*TGKLAP
Trigger: GGGAGCCAGTTTCCCTGTTCACACAGCACAGGGTGT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTCCCCACCTGTCCGGTaGGGAAGATTTGTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESPPVR*GRFVPP
Trigger: AGGAGGGACAAATCTTCCTCACCGGACAGGTGGGGA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR GCA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATTTGTGTGGTTATCGATaGCCTTGTAGACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHLCGYR*PCRPPQ
Trigger: TTGGGGAGGTCTACAAGGGCATCGATAACCACACAA...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGAGGACAGTGATCTCCTaGTGGATGTCCTCGATCTCA +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRTVIS*WMSSIS
Trigger: TGAGATCGAGGACATCCAGCAGGAGATCACTGTCCT...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACCGTTGTGCAGGTAGCATGTCTCGGTGGATCTTaGGTTCGGAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: TGSLGPWAFVRATVVQVACLGGS*VRSADN
Trigger: ATTATCTGCACTCCGAACGCAAGATCCACCGAGACA...TGCTACCTGCACAACGGTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMECVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGACVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGTGTTCCTCTTAATCTaGGTGTCTGTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQVFLLI*VSVSCP
Trigger: AGGGCAGCTCACAGACACGCAGATTAAGAGGAACAC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGTGTTCCTCTTAATCTaGGTGTCTGTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKVFLLI*VSVSCP
Trigger: AGGGCAGCTCACAGACACGCAGATTAAGAGGAACAC...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTTGAAGGGCTTGCTGTaGTGGCCCTCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMELKGLL*WPSSVG
Trigger: ACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTTTGAAGGGCTTGCTGTaGTGGCCCTCCAGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGALKGLL*WPSSVG
Trigger: ACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAA...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTCCCCTTGTGAAGCTTaGTGTGTGGACTCGGCCGGA +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESPCEA*CVDSAG
Trigger: TCCGGCCGAGTCCACACAGCAAGCTTCACAAGGGGA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCACGCTCCCGCCGCTCTaGTTGTGCTTCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELTLPPL*LCFSLS
Trigger: GCTCAAAGAGAAGCACAAGCAGAGCGGCGGGAGCGT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTGCACAACAGCACACTaGAGGGGTGGAAGGAGACGG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMECTTAH*RGGRRR
Trigger: CCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCCGTCTAATTTATTACTaGCCAGCATTCCTTCCAACG +
Preference number: 4 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCRLIYY*PAFLPT
Trigger: CGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACG...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGAGAGTGCTGGTTaGCAAATCCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMELESAG*QIPGGE
Trigger: CTCACCTCCGGGGATTTGCCAACCAGCACTCTCGAG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGGAGCTCCTTGGCCGTaGGCCGGAATCGGGGGTCTT +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCGAPWP*AGIGGL
Trigger: AAGACCCCCGATTCCGGCCCACGGCCAAGGAGCTCC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSRVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCACAAGATGGCTCACTaGTCTGATGGCCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGAHKMAH*SDGRPL
Trigger: GAGAGGGCGGCCATCAGACCAGTGAGCCATCTTGTG...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAAATGGGCATTCCCTGTaGCAACCCAGCCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGNGHSL*QPSPWN
Trigger: GTTCCAGGGGCTGGGTTGCCACAGGGAATGCCCATT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGTGAACAGGGAAACTaGCTCCCTTGGCCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRCEQGN*LPWPVG
Trigger: GCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACA...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGGGAACTCACTTTACTTaGTGCCTGGAATGTCACTCT +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRGTHFT*CLECHS
Trigger: AGAGTGACATTCCAGGCACCAAGTAAAGTGAGTTCC...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CAA 72 bp GCCACCGCACCCGGCCCCAGGTTTTTAACCCTTCTTTaGTCCTGCTTGTCCCATATCCTGGGTTGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: ATAPGPRFLTLL*SCLSHILGCSW
Trigger: CCAAGAACAACCCAGGATATGGGACAAGCAGGACAAAAGAAGGGTTAAAAACCTGGGGCCGGGTGCGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTACCAGATGTCAGCCTTaGAGTCGTAGGCCGACTGCT +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGATRCQP*SRRPTA
Trigger: AGCAGTCGGCCTACGACTTCAAGGCTGACATCTGGT...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCCACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: YYCPAFLPTGSRWATALFHHQLV*DAGAGL
Trigger: GAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTG...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGAREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAAAAATGTGCGAGTCTTaGGCGCGGAGCCGCTCAAGC +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRKMCES*ARSRSS
Trigger: GCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTT...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGTTGTGTGGTTATCGATaGCCTTGTAGACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQLCGYR*PCRPPQ
Trigger: TTGGGGAGGTCTACAAGGGCATCGATAACCACACAA...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTTGTGTGGTTATCGATaGCCTTGTAGACCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKLCGYR*PCRPPQ
Trigger: TTGGGGAGGTCTACAAGGGCATCGATAACCACACAA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTGTCTCGGTGGATCTTaGGTTCGGAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKCLGGS*VRSADN
Trigger: ATTATCTGCACTCCGAACGCAAGATCCACCGAGACA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCCATCCAGAAGGGGGTaGCCACGAATGTGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEPSRRG*PRMCSS
Trigger: AGAGGAACACATTCGTGGGCACCCCCTTCTGGATGG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGATRSTR*TISLSE
Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGT...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGTRSTR*TISLSE
Trigger: CTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGASCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAAGGAGGAGGCAGAGCTaGCCTGATAGTTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRRRRQS*PDSCSA
Trigger: CGCAGAGCAACTATCAGGGCAGCTCTGCCTCCTCCT...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGCGTCTAATTTATTACTaGCCAGCATTCCTTCCAACG +
Preference number: 4 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRRLIYY*PAFLPT
Trigger: CGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACG...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGCGAAGCAACGGTGGTaGCGGCAGCGACCGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCAKQRW*RQRPEK
Trigger: TTTCTCCGGTCGCTGCCGCCACCACCGTTGCTTCGC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316586.9
ENST00000535007.5
CDS-3UTR CCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGACTCGAGAGTGCTGGTTaGCAAATCCCCGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRLESAG*QIPGGE
Trigger: CTCACCTCCGGGGATTTGCCAACCAGCACTCTCGAG...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCTCCAGGGGACCTaGTTTAAGCAAGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMELLQGT*FKQVQC
Trigger: GCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACTCCTCCAGGGGACCTaGTTTAAGCAAGTCCAGTGC +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGLLQGT*FKQVQC
Trigger: GCACTGGACTTGCTTAAACCAGGTCCCCTGGAGGAG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRGTGRA*GGGQSL
Trigger: CAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCC...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTGGGTGGGCTGTTCTTaGGAATCAGGAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEWVGCS*ESGTGR
Trigger: GCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRALQCG*AVLGNQ
Trigger: CTGATTCCCAAGAACAGCCCACCCACACTGGAGGGC...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCTGGCCCTCCAGTGTaGGTGGGCTGTTCTTGGGAA +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWAGPPV*VGCSWE
Trigger: TTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGC...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCT +
Preference number: 4 (lower is better)
Translates to: YYCPAFLPTGSRWATALFQSPQS*TPRHAP
Trigger: AGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTG...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGCGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQRVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGTGCGCTTCAGCGGGTaGATGTCAGGTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEVRFSG*MSGGFC
Trigger: ACAGAAACCACCTGACATCCACCCGCTGAAGCGCAC...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGATGCCAGCAGCTATCTaGGGCCCTGGGAAAAATGTG +
Preference number: 4 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWMPAAI*GPGKNV
Trigger: CACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCAT...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACGATGGGAAGTGGCTGTaGTCTCACTGGATCCCCACT +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHDGKWL*SHWIPT
Trigger: AGTGGGGATCCAGTGAGACCACAGCCACTTCCCATC...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTGCTCACCTGTTCCCACAAGGGGTCCTaGGTGCTGGTTAATGCACCT +
Preference number: 4 (lower is better)
Translates to: WSPMQVMLADRHLTLLTCSHKGS*VLVNAP
Trigger: AGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGA...ACAGGTGAGCAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCATAGCTTGGTGCTCTaGTTGGCAAATCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELHSLVL*LANPRR
Trigger: CCTCCGGGGATTTGCCAACCAGAGCACCAAGCTATG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCATAGCTTGGTGCTCTaGTTGGCAAATCCCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGAHSLVL*LANPRR
Trigger: CCTCCGGGGATTTGCCAACCAGAGCACCAAGCTATG...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS-3UTR TCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGAGCCAAAGTAGCGGGTaGTGTAGGGGCTGTCGCACT +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWSQSSG*CRGCRT
Trigger: AGTGCGACAGCCCCTACATCACCCGCTACTTTGGCT...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCATCGGGGGTCTTTGTTaGGGCAGGCCTCCACGAACT +
Preference number: 4 (lower is better)
Translates to: YYCPAFLPTGSRWATALFIGGLC*GRPPRT
Trigger: AGTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGAT...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAACTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCG +
Preference number: 4 (lower is better)
Translates to: PREADGIHKDYVFKLQFKLAMPL*LPALIA
Trigger: CGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAG...TTTGAACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTAGGGCCGTCCCCTTGTaGAGCTTGCTGTGTGGACTC +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCRAVPL*SLLCGL
Trigger: GAGTCCACACAGCAAGCTTCACAAGGGGACGGCCCT...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCTTGTGCTTCTCTTTaGGCTCTCCGAAGACGGGCC +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWACASL*ALRRRA
Trigger: GGCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGC...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCAGAGAACAGCGTCCCTaGCGTGCACAACAGCACACT +
Preference number: 4 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTREQRP*RAQQHT
Trigger: AGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCT...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGAAGCTTCACGTCACCCTaGTCCGAGAGTAGCACGTTG +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRSFTSP*SESSTL
Trigger: CAACGTGCTACTCTCGGAGCAGGGTGACGTGAAGCT...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGTCTGTGAGCTGCCCTaGTACCCCAAAGTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCVCELP*YPKVRQ
Trigger: CTGGCGGACTTTGGGGTAGCAGGGCAGCTCACAGAC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGTGCGTGTCTGTGAGCTaGCCTGCTACCCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWCVSVS*PATPKS
Trigger: GGACTTTGGGGTAGCAGGGCAGCTCACAGACACGCA...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGALSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMELSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACCTATCTGAACAGCAGTaGGCTTCAGCGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHLSEQQ*ASAGGC
Trigger: ACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAG...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTAAGATTTGTCCCTCCTaGATACTGTGTCCACCCTTA +
Preference number: 4 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVKICPS*ILCPPL
Trigger: TAAGGGTGGACACAGTATGCAGGAGGGACAAATCTT...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTTCTCCCGCAGGATCGTaGCAATGTATGTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGASPAGS*QCMSPP
Trigger: TGGAGGAGACATACATTGCCACGATCCTGCGGGAGA...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGTGGAGGTCAGAGTTTaGAGGCTCCCCCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCVEVRV*RLPLGQ
Trigger: CTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCAC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGTGGGCTGTTCTTaGGAATCAGGAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRWVGCS*ESGTGR
Trigger: GCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCA...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp ACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCACACCCCCAGGGAGGCCGATaGCATACACAAAGACTATGT +
Preference number: 4 (lower is better)
Translates to: TAQHSFQREVDGRLLCSHPQGGR*HTQRLC
Trigger: ACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGGG...GTGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGAACCAAGGCCTCAGCTaGAGAAAGCATGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMENQGLS*RKHAEA
Trigger: AGCCTCTGCATGCTTTCTCCAGCTGAGGCCTTGGTT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGTGGTTTCTGTTGTGTaGAAACCTCTGCACTCGCTC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELVVSVV*KPLHSL
Trigger: GAGCGAGTGCAGAGGTTTTCACACAACAGAAACCAC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp CCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAACTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: PREADGIHKDYVFKLQFKLPSPI*TAVRFS
Trigger: GCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAG...TTTGAACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTAGGACAGTGATCTCCTaGTGGATGTCCTCGATCTCA +
Preference number: 4 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFRTVIS*WMSSIS
Trigger: TGAGATCGAGGACATCCAGCAGGAGATCACTGTCCT...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGTGTTCCTCTTAATCTaGGTGTCTGTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELVFLLI*VSVSCP
Trigger: AGGGCAGCTCACAGACACGCAGATTAAGAGGAACAC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp TATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTTCAGCTGCCCTGATAGTTaGTCTGCGCCTTGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: YYCPAFLPTGSRWATALFSCPDS*SAPWSE
Trigger: CTCAGACCAAGGCGCAGAGCAACTATCAGGGCAGCT...GAACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAACAGCATCTCCCCACCTaGATTCTCCTCTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PREADGIHKDYVFKLQFKQHLPT*ILLCLL
Trigger: GAGCAGGCAGAGGAGAATGCAGGTGGGGAGATGCTG...TTTGAACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACACACTGACTTTATTGTaGACAGGGAAAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHTLTLL*TGKGNS
Trigger: TGAGTTCCCTTTCCCTGTGCACAATAAAGTCAGTGT...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGTGGGTGGGCTGTTCTTaGGAATCAGGAACAGGACGC +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWWVGCS*ESGTGR
Trigger: GCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCA...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp TGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTGCTCACCTGTCCAACGGGAAGTAGATaGGCGACTGCTTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: WSPMQVMLADRHLTLLTCPTGSR*ATALFT
Trigger: TGTGAACAAAGCAGTCGCCCATCTACTTCCCGTTGG...ACAGGTGAGCAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTGGTGGACAGCTAAACAAGTCTaGCAGAAGCCACGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: VSCPFRCPLSSHFYSWWWTAKQV*QKPRLF
Trigger: GAACAAGCGTGGCTTCTGCCAGACTTGTTTAGCTGT...CCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR TCA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGTCTGCCTCAGCCTCCTaGGTAACTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWSASAS*VTEITG
Trigger: GCCTGTAATCTCAGTTACTCAGGAGGCTGAGGCAGA...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTTGTCTCGGTGGATCTTaGGTTCGGAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGACLGGS*VRSADN
Trigger: ATTATCTGCACTCCGAACGCAAGATCCACCGAGACA...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGATGTCTCGGTGGATCTTaGGTTCGGAGTGCAGATAAT +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGCLGGS*VRSADN
Trigger: ATTATCTGCACTCCGAACGCAAGATCCACCGAGACA...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR GCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCACCCTTCTTTTGTCCTaGTTGTCCCATATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELTLLLS*LSHILG
Trigger: ACCCAGGATATGGGACAAGCAGGACAAAAGAAGGGT...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCTGCTCACCTGTCGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: WSPMQVMLADRHLTLLTCRVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...ACAGGTGAGCAGGGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMERVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCCGGGTGGATGTCAGGTaGTTTCTGTTGTGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELRVDVR*FLLCEN
Trigger: GTTTTCACACAACAGAAACCACCTGACATCCACCCG...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CCCAGGGAGGCCGATGGCATACACAAAGACTATGTTTTCAAGCTCCAGTTCAAAGTGCGCTTCAGCGGGTaGATGTCAGGTGGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: PREADGIHKDYVFKLQFKVRFSG*MSGGFC
Trigger: ACAGAAACCACCTGACATCCACCCGCTGAAGCGCAC...TTTGAACTGGAGCTTGAAAACATAGTCTTTGTGTATGCCATCGGCCTCCCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR TCA 90 bp GATACAATCTTGGCTCACTATAACCTGCACCTCCAGGGTTCAAGCGATTCTTCTGCACGTTGGCAGCTTTaGTGTCTCGGTGGATCTTGC +
Preference number: 4 (lower is better)
Translates to: DTILAHYNLHLQGSSDSSARWQL*CLGGSC
Trigger: GCAAGATCCACCGAGACATCAAAGCTGCCAACGTGC...AGAAGAATCGCTTGAACCCTGGAGGTGCAGGTTATAGTGAGCCAAGATTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp CAACCTGCCCAGGTTTGGACACAACTACAAAGAACAGCAGGACACAGAGGTGACTCACTCAGGCTGGAGTaGAGTGATACAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPAQVWTQLQRTAGHRGDSLRLE*SDTILA
Trigger: AGCCAAGATTGTATCACTGCACTCCAGCCTGAGTGA...GTCACCTCTGTGTCCTGCTGTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGATTTGTATTTTGGTTCTaGCCTCCCATGCTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGFVFWF*PPMLCP
Trigger: TGGGCAAAGCATGGGAGGGCAGAACCAAAATACAAA...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
3UTR CAA 72 bp TCTTTTGTCCTGCTTGTCCCATATCCTGGGTTGTTCTaGGGACAGTGTCTGAGCACAAGATGGCTCACTGGT +
Preference number: 4 (lower is better)
Translates to: SFVLLVPYPGLF*GQCLSTRWLTG
Trigger: ACCAGTGAGCCATCTTGTGCTCAGACACTGTCCCAAGAACAACCCAGGATATGGGACAAGCAGGACAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp GATACAATCTTGGCTCACTATAACCTGCACCTCCAGGGTTCAAGCGATTCTTCTACAGTGATCTCCTGCTaGATGTCCTCGATCTCATCC +
Preference number: 4 (lower is better)
Translates to: DTILAHYNLHLQGSSDSSTVISC*MSSISS
Trigger: GGATGAGATCGAGGACATCCAGCAGGAGATCACTGT...AGAAGAATCGCTTGAACCCTGGAGGTGCAGGTTATAGTGAGCCAAGATTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR GCA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTACTCACTTTACTTGGTaGCTGGAATGTCACTCTAGG +
Preference number: 4 (lower is better)
Translates to: FITAQHSFQREVDGRLLCTHFTW*LECHSR
Trigger: CCTAGAGTGACATTCCAGGCACCAAGTAAAGTGAGT...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CCA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTTCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: QARHSTGHLPSQHSSYGASAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGATCAGCACAGTTCTTATaGAGCTCAGAACAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGSAQFL*SSEQKQ
Trigger: TTGTTTTTGTTCTGAGCTCCATAAGAACTGTGCTGA...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CCA 90 bp GATACAATCTTGGCTCACTATAACCTGCACCTCCAGGGTTCAAGCGATTCTTCTACTTTACTTGGTGCCTaGAATGTCACTCTAGGTTTT +
Preference number: 4 (lower is better)
Translates to: DTILAHYNLHLQGSSDSSTLLGA*NVTLGF
Trigger: AAAACCTAGAGTGACATTCCAGGCACCAAGTAAAGT...AGAAGAATCGCTTGAACCCTGGAGGTGCAGGTTATAGTGAGCCAAGATTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS CCA 90 bp GACGGCGAGGGCGGTGCTCGGCGTCGCGGCCCGCGCACGGCTCTCTaGGACCCCGAGTCCCACCGCCCACTCCGGGCCCGGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: DGEGGARRRGPRTAL*DPESHRPLRARKPA
Trigger: AGCAGGCTTCCGGGCCCGGAGTGGGCGGTGGGACTCGGGGTCCCAGAGAGCCGTGCGCGGGCCGCGACGCCGAGCACCGCCCTCGCCGTC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403346.7
ENST00000535007.5
CDS GCA 90 bp TGGCGGCAGCGACCGGAGAAAGCCCGGAGGCGACGGCGAGGGCGGTaGTCGGCGTCGCGGCCCGCGCACGGCTCTCTGGGACCCCGAGTC +
Preference number: 5 (lower is better)
Translates to: WRQRPEKARRRRRGR*SASRPAHGSLGPRV
Trigger: GACTCGGGGTCCCAGAGAGCCGTGCGCGGGCCGCGACGCCGAGCACCGCCCTCGCCGTCGCCTCCGGGCTTTCTCCGGTCGCTGCCGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000403346.7
ENST00000535007.5
CDS GCA 90 bp GCGTCTGGATCCCGCGGAGAGGCGCGGAGCCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTGCGAGGGACACCAGGGGCGCTCGGTGCC +
Preference number: 5 (lower is better)
Translates to: ASGSRGEARSRLARP*GVSPLRGTPGALGA
Trigger: GGCACCGAGCGCCCCTGGTGTCCCTCGCAGTGGACTGACGCCGCAGGGGCGAGCTAGCCGGCTCCGCGCCTCTCCGCGGGATCCAGACGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401869.5
ENST00000424537.5
ENST00000439101.5
CDS CCA 90 bp GGTCCACTCGAGAGTGCTGGTTGGCAAATCCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCCTCCGCCAGCAGCCCCAGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GPLESAGWQIPGGEP*PRRLRPSASSPRRR
Trigger: ACGCCTCCTGGGGCTGCTGGCGGAGGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGCCAACCAGCACTCTCGAGTGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000426941.1
ENST00000436402.5
ENST00000436917.5
ENST00000452891.5
ENST00000495372.1
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAGACCTCGGCTGCCTCTaGACGGGCTCCGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRADLGCL*TGSAGF
Trigger: GAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTC...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS TCA 90 bp CCATCAGCTTGTCTGAGATGCCGGGGCAGGACTCCTCGGCCAGGCTaGAGGCGTTCTCCAGCTCCTCCAGCGCACCCACGCTCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PSACLRCRGRTPRPG*RRSPAPPAHPRSRR
Trigger: GCGGCGGGAGCGTGGGTGCGCTGGAGGAGCTGGAGAACGCCTTCAGCCTGGCCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000423004.5
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000494699.1
ENST00000535007.5
ENST00000543554.5
CDS TCA 90 bp TTGTGGGACCCACCTGGGCTAGAGCGCGGGACGCGCCCAGGACAGTaGCTGCTGCTGGAAGCCGTCATGGCACTCCCCAGGGTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: LWDPPGLERGTRPGQ*LLLEAVMALPRVRE
Trigger: CTCCCGGACCCTGGGGAGTGCCATGACGGCTTCCAGCAGCAGTCACTGTCCTGGGCGCGTCCCGCGCTCTAGCCCAGGTGGGTCCCACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCGGTGGAGGTCAGAGTTaGGAGGCTCCCCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAGGGQS*EAPPWP
Trigger: TGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACC...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCCGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: CCDEDSGPGTLQPRMARARNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS GCA 90 bp CCGAAGACGGGCCGGACCAGCGTGGACAGGCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCAGGATGTCAGAGTCCTCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PKTGRTSVDRHWDLG*LLTGSAGCQSPQSW
Trigger: CCAGCTCTGAGGACTCTGACATCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCGTCTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS GCA 90 bp TCCGGGAGGGACTTGCAGATCCCAAGGCTACCTGGTGCGTCCCCGTaGCCCGTGGGCCGCCAGGTCATAGTGCCCCCTGTGTGCATTCCC +
Preference number: 5 (lower is better)
Translates to: SGRDLQIPRLPGASP*PVGRQVIVPPVCIP
Trigger: GGGAATGCACACAGGGGGCACTATGACCTGGCGGCCCACGGGGCACGGGGACGCACCAGGTAGCCTTGGGATCTGCAAGTCCCTCCCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS CCA 90 bp TCCATAGCTTGGTGCTCTGGTTGGCAAATCCCCGGAGGTGAGCCATaGCCGCGCCGCCTCAGACCCTCCGCCAGCAGCCCCAGGAGGCGT +
Preference number: 5 (lower is better)
Translates to: SIAWCSGWQIPGGEP*PRRLRPSASSPRRR
Trigger: ACGCCTCCTGGGGCTGCTGGCGGAGGGTCTGAGGCGGCGCGGCCATGGCTCACCTCCGGGGATTTGCCAACCAGAGCACCAAGCTATGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS CCA 90 bp CAGCTGCTTGACACAGGACAGGCAGGCGTCATCCCAGGCTCCACGTaGCTCCACCCCGGGCCCCCTGAGAAGGGCCAGGGTACCATCCAC +
Preference number: 5 (lower is better)
Translates to: QLLDTGQAGVIPGST*LHPGPPEKGQGTIH
Trigger: GTGGATGGTACCCTGGCCCTTCTCAGGGGGCCCGGGGTGGAGCCACGTGGAGCCTGGGATGACGCCTGCCTGTCCTGTGTCAAGCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS-3UTR CAA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCCCAATGCGGTCGAGCTaGGTGAAGAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: AHEGHAGGWSPREQYCWAPMRSS*VKSSSG
Trigger: CCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGG...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCACGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRARNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACGACCTCGGCTGCCTCTaGACGGGCTCCGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHDLGCL*TGSAGF
Trigger: GAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTC...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCCAGCCTCCCGCTGCTGGGCTACAGCGTGAGCATCCCCAGGGAGGCCGATGGCGGGAAACTGGCTCCCTaGGCCCGTGGGCATTTGTAC +
Preference number: 5 (lower is better)
Translates to: ASLPLLGYSVSIPREADGGKLAP*ARGHLY
Trigger: GTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCC...GCCATCGGCCTCCCTGGGGATGCTCACGCTGTAGCCCAGCAGCGGGAGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS GCA 90 bp CCTTGCCACTCTCAAACCCAGGGCCACCTAGGGCCACAGGGGCACTaGCAGCAGGAGCCCAACGGCTCCACTCCGAGCTCCAGGGCTCTT +
Preference number: 5 (lower is better)
Translates to: PCHSQTQGHLGPQGH*QQEPNGSTPSSRAL
Trigger: AAGAGCCCTGGAGCTCGGAGTGGAGCCGTTGGGCTCCTGCTGGCAGTGCCCCTGTGGCCCTAGGTGGCCCTGGGTTTGAGAGTGGCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 90 bp AGCGCGGGACGCGCCCAGGACAGTGACTGCTGCTGGAAGCCGTCATaGCACTCCCCAGGGTCCGGGAGGGACTTGCAGATCCCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: SAGRAQDSDCCWKPS*HSPGSGRDLQIPRL
Trigger: TAGCCTTGGGATCTGCAAGTCCCTCCCGGACCCTGGGGAGTGCCATGACGGCTTCCAGCAGCAGTCACTGTCCTGGGCGCGTCCCGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: AHEGHAGGWSPREQYCWANSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAAGGTGCACCATCAGCTaGTCTGAGATGCCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRARCTIS*SEMPGQ
Trigger: CTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCATCCTTGGTCACACCGTaGTGGGACCCACCTGGGCTA +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRASLVTP*WDPPGL
Trigger: TAGCCCAGGTGGGTCCCACAACGGTGTGACCAAGGA...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS GCA 90 bp CTGCCAGGCCACGGGGTCCAGCTGATGCCTCAGCAGGCCCTGTCCTaGAGCCTTGAGGGGGTCCCTGCCCAACACTATATCTGGTCACCC +
Preference number: 5 (lower is better)
Translates to: LPGHGVQLMPQQALS*SLEGVPAQHYIWSP
Trigger: GGGTGACCAGATATAGTGTTGGGCAGGGACCCCCTCAAGGCTGCAGGACAGGGCCTGCTGAGGCATCAGCTGGACCCCGTGGCCTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465009.1
CDS-3UTR CAA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCAATGCGGTCGAGCTaGGTGAAGAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSPMRSS*VKSSSG
Trigger: CCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGG...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCTCCCCAAACGAGCCCTaGCCAATGCGGTCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSSPNEP*PMRSSL
Trigger: CAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGA...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGCCCCGCATGGCCCGGGCCTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: CCDEDSGPGTLQPRMARASESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...GGCCCGGGCCATGCGGGGCTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRANSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCTGCTTGTGCTTCTCTTaGAGCTCTCCGAAGACGGGC +
Preference number: 5 (lower is better)
Translates to: AHEGHAGGWSPREQYCWACLCFS*SSPKTG
Trigger: GCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGCA...GGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CCAGGGGGCCAGCAGCTCAGCCGGGAGGGCCCCAAGCATCGTGCAGGATGGCCCTGTCCCTATGCTGTCTaGCAGGATGACTACCCACTG +
Preference number: 5 (lower is better)
Translates to: PGGQQLSREGPKHRAGWPCPYAV*QDDYPL
Trigger: CAGTGGGTAGTCATCCTGCAAGACAGCATAGGGACA...GGGCCATCCTGCACGATGCTTGGGGCCCTCCCGGCTGAGCTGCTGGCCCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCTTGGCCCGTGGGCATTaGTACGTGCCACCGTTGTGC +
Preference number: 5 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSLARGH*YVPPLC
Trigger: GCACAACGGTGGCACGTACAAATGCCCACGGGCCAA...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS TCA 90 bp CCGTCAAGACCGCCTTGCACCCTCTGGCATGTCACTCAGTCCCTCTaGCATGGAAGAGAGCCGGGCACAGCACCAGCAGGGTCCCCGCCT +
Preference number: 5 (lower is better)
Translates to: PSRPPCTLWHVTQSL*HGREPGTAPAGSPP
Trigger: AGGCGGGGACCCTGCTGGTGCTGTGCCCGGCTCTCTTCCATGTCAGAGGGACTGAGTGACATGCCAGAGGGTGCAAGGCGGTCTTGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495372.1
CDS CCA 90 bp TCTTTGAGCTCTCCGAAGACGGGCCGGACCAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTGACGGGCTCCGCAGGATGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: SLSSPKTGRTSVDRH*DLGCLLTGSAGCQS
Trigger: ACTCTGACATCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCGTCTTCGGAGAGCTCAAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS CCA 90 bp CTGGCCCAGCCTCCCGTCTGCTCTCAGCAGGGCCAGACCACACGCTaGGGCTACTCAATTCTACACCTGCTGCTGTGCCGTGCACCACAG +
Preference number: 5 (lower is better)
Translates to: LAQPPVCSQQGQTTR*GYSILHLLLCRAPQ
Trigger: CTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCTGGCCCTGCTGAGAGCAGACGGGAGGCTGGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 90 bp CTACATGACAGAGATGGCTCGTTGCCAGTGGCAAGTCCCTCCCCATaGGCTGGCCCAGCCTCCCGTCTGCTCTCAGCAGGGCCAGACCAC +
Preference number: 5 (lower is better)
Translates to: LHDRDGSLPVASPSP*AGPASRLLSAGPDH
Trigger: GTGGTCTGGCCCTGCTGAGAGCAGACGGGAGGCTGGGCCAGCCCATGGGGAGGGACTTGCCACTGGCAACGAGCCATCTCTGTCATGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 90 bp AAGACCGCCTTGCACCCTCTGGCATGTCACTCAGTCCCTCTGACATaGAAGAGAGCCGGGCACAGCACCAGCAGGGTCCCCGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: KTALHPLACHSVPLT*KRAGHSTSRVPASP
Trigger: TGGGGAGGCGGGGACCCTGCTGGTGCTGTGCCCGGCTCTCTTCCATGTCAGAGGGACTGAGTGACATGCCAGAGGGTGCAAGGCGGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495372.1
CDS-3UTR CAA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTCCCCAAACGAGCCCTaGCCAATGCGGTCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSPNEP*PMRSSL
Trigger: CAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCSESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS TCA 90 bp TGTAGACCTCCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTCCGCGGGGCTCC +
Preference number: 5 (lower is better)
Translates to: CRPPQTSPCQCGRAW*RAPQGPLESAPRGS
Trigger: GGAGCCCCGCGGAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGAGGTCTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000442307.5
ENST00000535007.5
CDS CCA 90 bp GAGCTGGGCCCAAGCCCGCTGGCCACGCCCTGGGCACACAGATCCTaGCTGTATCACATTTCTGAGGACGGTGCTGACTGCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: ELGPSPLATPWAHRS*LYHISEDGADCPSA
Trigger: TGCTGATGGGCAGTCAGCACCGTCCTCAGAAATGTGATACAGCCAGGATCTGTGTGCCCAGGGCGTGGCCAGCGGGCTTGGGCCCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAAGCACGTTGGCAGCTTaGATGTCTCGGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRASTLAA*MSRWIL
Trigger: CAAGATCCACCGAGACATCAAAGCTGCCAACGTGCT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGACCTCGGCTGCCTCTaGACGGGCTCCGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQDLGCL*TGSAGF
Trigger: GAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGGAATCCGTCACAGGGAAGTTGACCTCGGCTGCCTCTaGACGGGCTCCGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: ALFFRWAKQSPGIRHREVDLGCL*TGSAGF
Trigger: GAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTC...AACTTCCCTGTGACGGATTCCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GAGTCTGCAGAAGACCCAGGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCTGCTTGTGCTTCTCTTaGAGCTCTCCGAAGACGGGC +
Preference number: 5 (lower is better)
Translates to: ESAEDPGVAHEGHAGGWSCLCFS*SSPKTG
Trigger: GCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGCA...GCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCCTGGGTCTTCTGCAGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS TCA 90 bp TGTAGACCTCCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGTGGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: CRPPQTSPCQCGRAW*RAPQGPLESAVGPG
Trigger: CCCTGGCCCCACAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGAGGTCTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439101.5
ENST00000483603.5
CDS CCA 90 bp GTGGGTGGGCTGTTCTTGGGAATCAGGAACAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGCTCCCCCTTGGCCAGCTCGATGGCT +
Preference number: 5 (lower is better)
Translates to: VGGLFLGIRNRTRMG*RSEFGGSPLASSMA
Trigger: AGCCATCGAGCTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000413760.5
ENST00000423004.5
ENST00000424537.5
ENST00000442307.5
ENST00000450497.5
ENST00000461760.1
ENST00000478403.5
ENST00000487962.5
ENST00000495143.5
ENST00000535007.5
ENST00000543554.5
CDS CCA 90 bp CCAGTGTGGGTGGGCTGTTCTTGGGAATCAGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTGGAGGCTCCCCCTTGGCCAGCTCGA +
Preference number: 5 (lower is better)
Translates to: PVWVGCSWESGTGRA*GGGQSLEAPPWPAR
Trigger: TCGAGCTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000413760.5
ENST00000423004.5
ENST00000424537.5
ENST00000442307.5
ENST00000450497.5
ENST00000461760.1
ENST00000478403.5
ENST00000487962.5
ENST00000495143.5
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGGGTGGAGGTCAGAGTTaGGAGGCTCCCCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVGGGQS*EAPPWP
Trigger: TGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACC...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGGTGGAGGTCAGAGTTaGGAGGCTCCCCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHGGGQS*EAPPWP
Trigger: TGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACC...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGCGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVRNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTGCTTGTGCTTCTCTTaGAGCTCTCCGAAGACGGGC +
Preference number: 5 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHCLCFS*SSPKTG
Trigger: GCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGCA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGAGGTGCACCATCAGCTaGTCTGAGATGCCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRRCTIS*SEMPGQ
Trigger: CTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCT...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS GCA 90 bp GGCCAGACCACACGCTGGGGCTACTCAATTCTACACCTGCTGCTGTaGCGTGCACCACAGGGAACCAACAACTCCAGCCAAGTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GQTTRWGYSILHLLL*RAPQGTNNSSQVWP
Trigger: GGGCCACACTTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 90 bp CACGAACTCCTTGAAGGGCTTGCTGTGCTGGCCCTCCAGTGTGGGTaGGCTGTTCTTGGGAATCAGGAACAGGACGCGCATGGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: HELLEGLAVLALQCG*AVLGNQEQDAHGVE
Trigger: CTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCACCCACACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000423004.5
ENST00000424537.5
ENST00000442307.5
ENST00000450497.5
ENST00000461760.1
ENST00000478403.5
ENST00000487962.5
ENST00000495143.5
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGCCAATGCGGTCGAGCTaGGTGAAGAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGPMRSS*VKSSSG
Trigger: CCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGG...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTCCCCAAACGAGCCCTaGCCAATGCGGTCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGSPNEP*PMRSSL
Trigger: CAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGA...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTCCCCAAACGAGCCCTaGCCAATGCGGTCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSSPNEP*PMRSSL
Trigger: CAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTCCAGGTCGATGATCTaGATGGCCACCACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSRSMI*MATTSF
Trigger: AAAGGAGGTGGTGGCCATCAAGATCATCGACCTGGA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TGGGCTGCCGTCTCTGCGTGCTGTGATGAGGACTCGGGACCAGGGACGCTGCAGAGCACGTTGGCAGCTTaGATGTCTCGGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: WAAVSACCDEDSGPGTLQSTLAA*MSRWIL
Trigger: CAAGATCCACCGAGACATCAAAGCTGCCAACGTGCT...CTGCAGCGTCCCTGGTCCCGAGTCCTCATCACAGCACGCAGAGACGGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKRNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCAGGGTCCCTGCCGAGGACTGGCCTAGAGCAAGCACTGGAAAAGAGGCCCTGCTGCTTGTGCTTCTCTTaGAGCTCTCCGAAGACGGGC +
Preference number: 5 (lower is better)
Translates to: AGSLPRTGLEQALEKRPCCLCFS*SSPKTG
Trigger: GCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGCA...GCAGGGCCTCTTTTCCAGTGCTTGCTCTAGGCCAGTCCTCGGCAGGGACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGAGGTGCACCATCAGCTaGTCTGAGATGCCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVRCTIS*SEMPGQ
Trigger: CTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCT...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGTAGCTCATGAGGGCCACGCCGGCGGCTGGAGCCCCCGTGAGCAATACTGCGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: GVAHEGHAGGWSPREQYCVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...GCAGTATTGCTCACGGGGGCTCCAGCCGCCGGCGTGGCCCTCATGAGCTACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACTCCGGTGAGGAAGATTaGTCCCTCCTGCATACTGTG +
Preference number: 5 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHSGEED*SLLHTV
Trigger: CACAGTATGCAGGAGGGACAAATCTTCCTCACCGGA...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS TCA 90 bp TGTAGACCTCCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGTCAAGGGGTGG +
Preference number: 5 (lower is better)
Translates to: CRPPQTSPCQCGRAW*RAPQGPLESAVKGW
Trigger: CCACCCCTTGACAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGAGGTCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413760.5
ENST00000440109.5
ENST00000543554.5
CDS TCA 90 bp TGTAGACCTCCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCCGCAGCCTCTGTT +
Preference number: 5 (lower is better)
Translates to: CRPPQTSPCQCGRAW*RAPQGPLESAAASV
Trigger: AACAGAGGCTGCGGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGAGGTCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429279.5
CDS GCA 90 bp CTCAGCAGGGCCAGACCACACGCTGGGGCTACTCAATTCTACACCTaGTGCTGTGCCGTGCACCACAGGGAACCAACAACTCCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSRARPHAGATQFYT*CCAVHHREPTTPAK
Trigger: CTTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCTGGCCCTGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 90 bp CTTGTGCTTCTCTTTGAGCTGGGCCCAAGCCCGCTGGCCACGCCCTaGGCACACAGATCCTGGCTGTATCACATTTCTGAGGACGGTGCT +
Preference number: 5 (lower is better)
Translates to: LVLLFELGPSPLATP*AHRSWLYHISEDGA
Trigger: AGCACCGTCCTCAGAAATGTGATACAGCCAGGATCTGTGTGCCCAGGGCGTGGCCAGCGGGCTTGGGCCCAGCTCAAAGAGAAGCACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS-3UTR CAA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGCCAATGCGGTCGAGCTaGGTGAAGAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKPMRSS*VKSSSG
Trigger: CCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGG...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCTGTGGTCTCACTGGATCCCCACTGGCACCAGCAGTGTGGGTGGGCCTCATGTTGGCCACCACCTCCTTaGTGTGGTTATCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: AVVSLDPHWHQQCGWASCWPPPP*CGYRCP
Trigger: AGGGCATCGATAACCACACAAAGGAGGTGGTGGCCA...ACATGAGGCCCACCCACACTGCTGGTGCCAGTGGGGATCCAGTGAGACCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGTGGCCACCACCTCCTTaGTGTGGTTATCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRWPPPP*CGYRCP
Trigger: AGGGCATCGATAACCACACAAAGGAGGTGGTGGCCA...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSNSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHNSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGAATCGGGGGTCTTTGTaGAGGCAGGCCTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGNRGSL*RQASTN
Trigger: GTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATT...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGAATCGGGGGTCTTTGTaGAGGCAGGCCTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVNRGSL*RQASTN
Trigger: GTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATT...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCAATCGGGGGTCTTTGTaGAGGCAGGCCTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSNRGSL*RQASTN
Trigger: GTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATT...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGACCTCGGCTGCCTCTaGACGGGCTCCGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGDLGCL*TGSAGF
Trigger: GAAGCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTC...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGTGCTTGTGCTTCTCTTaGAGCTCTCCGAAGACGGGC +
Preference number: 5 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRCLCFS*SSPKTG
Trigger: GCCCGTCTTCGGAGAGCTCAAAGAGAAGCACAAGCA...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCGGCTGGAGCCCCCGTGAGCAATACTGCTGGGCCAGGAGAGGGAGGAGGGCAATGATGATCCATAGCTaGGTGCTCTGGTTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: GGWSPREQYCWARRGRRAMMIHS*VLWLAN
Trigger: ATTTGCCAACCAGAGCACCAAGCTATGGATCATCAT...TGCCCTCCTCCCTCTCCTGGCCCAGCAGTATTGCTCACGGGGGCTCCAGCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS GCA 90 bp GACCACACGCTGGGGCTACTCAATTCTACACCTGCTGCTGTGCCGTaGACCACAGGGAACCAACAACTCCAGCCAAGTGTGGCCCTTTCC +
Preference number: 5 (lower is better)
Translates to: DHTLGLLNSTPAAVP*TTGNQQLQPSVALS
Trigger: GGAAAGGGCCACACTTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS GCA 90 bp AGCAGGGCCAGACCACACGCTGGGGCTACTCAATTCTACACCTGCTaGTGTGCCGTGCACCACAGGGAACCAACAACTCCAGCCAAGTGT +
Preference number: 5 (lower is better)
Translates to: SRARPHAGATQFYTC*CAVHHREPTTPAKC
Trigger: ACACTTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCTGGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS GCA 90 bp CCAGCAGGAGCCCAACGGCTCCACTCCGAGCTCCAGGGCTCTTCCTaGATTTGGCTTTTACGACAAATCCCAACGACAAGCGACTTCGCC +
Preference number: 5 (lower is better)
Translates to: PAGAQRLHSELQGSS*IWLLRQIPTTSDFA
Trigger: GGCGAAGTCGCTTGTCGTTGGGATTTGTCGTAAAAGCCAAATGCAGGAAGAGCCCTGGAGCTCGGAGTGGAGCCGTTGGGCTCCTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 90 bp TCCATAGCTTGGTGCTCTGGGACCGGAGACAAACCCATCAGCATTTaGCAGCAAGAGGAAGGGCATGCTCCAGGGTGGGAGTCACAGGCC +
Preference number: 5 (lower is better)
Translates to: SIAWCSGTGDKPISI*QQEEGHAPGWESQA
Trigger: GGCCTGTGACTCCCACCCTGGAGCATGCCCTTCCTCTTGCTGCCAAATGCTGATGGGTTTGTCTCCGGTCCCAGAGCACCAAGCTATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450497.5
ENST00000479442.1
CDS CCA 90 bp GGAGCCCAACGGCTCCACTCCGAGCTCCAGGGCTCTTCCTGCATTTaGCTTTTACGACAAATCCCAACGACAAGCGACTTCGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: GAQRLHSELQGSSCI*LLRQIPTTSDFAHW
Trigger: CCAGTGGGCGAAGTCGCTTGTCGTTGGGATTTGTCGTAAAAGCCAAATGCAGGAAGAGCCCTGGAGCTCGGAGTGGAGCCGTTGGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS-3UTR CAA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGCCACCACCTCCTTaGTGTGGTTATCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGWPPPP*CGYRCP
Trigger: AGGGCATCGATAACCACACAAAGGAGGTGGTGGCCA...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGTCCAGGTCGATGATCTaGATGGCCACCACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRSRSMI*MATTSF
Trigger: AAAGGAGGTGGTGGCCATCAAGATCATCGACCTGGA...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GAAAAATGTGCGAGTCTTGAGCGCGGAGCCGCTCAAGCCACAGCTCCCAGGCCCAGCACGTTGGCAGCTTaGATGTCTCGGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: EKCASLERGAAQATAPRPSTLAA*MSRWIL
Trigger: CAAGATCCACCGAGACATCAAAGCTGCCAACGTGCT...GGGCCTGGGAGCTGTGGCTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp CAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATGTGAGGAGCACGTTGGCAGCTTaGATGTCTCGGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: QHTAGVEGDGDLVTWHVRSTLAA*MSRWIL
Trigger: CAAGATCCACCGAGACATCAAAGCTGCCAACGTGCT...CCTCACATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSSESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: NSVPDVHNSTLQGWKETVSESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...CACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQNSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACAATCGGGGGTCTTTGTaGAGGCAGGCCTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHNRGSL*RQASTN
Trigger: GTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATT...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGAATCGGGGGTCTTTGTaGAGGCAGGCCTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQNRGSL*RQASTN
Trigger: GTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATT...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GTGAGGCCCACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: VRPTGSDVSLQARHSTGHVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...GTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGTGGGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS TCA 90 bp TGTAGACCTCCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGGTTGGCAAATC +
Preference number: 5 (lower is better)
Translates to: CRPPQTSPCQCGRAW*RAPQGPLESAGWQI
Trigger: GATTTGCCAACCAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGAGGTCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000426941.1
ENST00000436402.5
ENST00000436917.5
ENST00000452891.5
ENST00000495372.1
CDS TCA 90 bp TGTGTGCATTCCCCTAGTGCACCGCAGGGATCCCCACCTGTCCGGTaGGGAAGATTTGTCCCTCCTGCATACTGTGTCCACCCTTACAGG +
Preference number: 5 (lower is better)
Translates to: CVHSPSAPQGSPPVR*GRFVPPAYCVHPYR
Trigger: CCTGTAAGGGTGGACACAGTATGCAGGAGGGACAAATCTTCCTCACCGGACAGGTGGGGATCCCTGCGGTGCACTAGGGGAATGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS CCA 90 bp CTGCTGTGCCGTGCACCACAGGGAACCAACAACTCCAGCCAAGTGTaGCCCTTTCCTACACTCAGTCCACAGCTGGTTTCCTCAGCGTAC +
Preference number: 5 (lower is better)
Translates to: LLCRAPQGTNNSSQV*PFPTLSPQLVSSAY
Trigger: GTACGCTGAGGAAACCAGCTGTGGACTGAGTGTAGGAAAGGGCCACACTTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492127.5
CDS-3UTR CAA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTGGCCACCACCTCCTTaGTGTGGTTATCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKWPPPP*CGYRCP
Trigger: AGGGCATCGATAACCACACAAAGGAGGTGGTGGCCA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCTCCAGGTCGATGATCTaGATGGCCACCACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSSRSMI*MATTSF
Trigger: AAAGGAGGTGGTGGCCATCAAGATCATCGACCTGGA...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp ACGGGATCCGACGTGTCCCTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTAGCACGTTGGCAGCTTaGATGTCTCGGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: TGSDVSLQARHSTGHLPSSTLAA*MSRWIL
Trigger: CAAGATCCACCGAGACATCAAAGCTGCCAACGTGCT...ACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAGGGACACGTCGGATCCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKSESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGGTGGAGGTCAGAGTTaGGAGGCTCCCCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELGGGQS*EAPPWP
Trigger: TGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMERNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGACGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGRNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS TCA 90 bp TCCCTCCTGCATACTGTGTCCACCCTTACAGGCCCTCACTCTCCATaGTGGCTCAGCACAGGTGACTATCCTGACCTCCTCACATCCCTC +
Preference number: 5 (lower is better)
Translates to: SLLHTVSTLTGPHSP*WLSTGDYPDLLTSL
Trigger: GAGGGATGTGAGGAGGTCAGGATAGTCACCTGTGCTGAGCCATCATGGAGAGTGAGGGCCTGTAAGGGTGGACACAGTATGCAGGAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS TCA 90 bp GGCTCAGGACGTTACAAGAGCCACATCCACCCCCAGCAGGACCTTTaGTGTCTCGGTGGATCTTGCGTTCGGAGTGCAGATAATCCAGGC +
Preference number: 5 (lower is better)
Translates to: GSGRYKSHIHPQQDL*CLGGSCVRSADNPG
Trigger: GCCTGGATTATCTGCACTCCGAACGCAAGATCCACCGAGACATCAAAGGTCCTGCTGGGGGTGGATGTGGCTCTTGTAACGTCCTGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479442.1
ENST00000492127.5
ENST00000496159.1
CDS GCA 90 bp GTGCGTGTCTTCTCATGGTGCACTGCCGAGTCCTTTAAGAAGCTATaGTTCCCTGTCATGCGTCCAGGACAGCCCCTTGAACCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: VRVFSWCTAESFKKL*FPVMRPGQPLEPLL
Trigger: CAGGAGGGGTTCAAGGGGCTGTCCTGGACGCATGACAGGGAAGCATAGCTTCTTAAAGGACTCGGCAGTGCACCATGAGAAGACACGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 90 bp CTCCTCACATCCCTCCTTCTTCGAGAGGGTTCTGGCGTTTCTCTCTaGTCCCTGGTGCGTGTCTTCTCATGGTGCACTGCCGAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: LLTSLLLREGSGVSL*SLVRVFSWCTAESF
Trigger: AAAGGACTCGGCAGTGCACCATGAGAAGACACGCACCAGGGAGCAGAGAGAAACGCCAGAACCCTCTCGAAGAAGGAGGGATGTGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 90 bp GCAGGGCGGCACCTGCCCGGGGATGGACCCCGACTAAACCTTCTCTaGTTTCTCTATAGAAGGATCATCTGTGTTTGCACCTCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: AGRHLPGDGPRLNLL*FLYRRIICVCTSPK
Trigger: CTTCGGAGAGGTGCAAACACAGATGATCCTTCTATAGAGAAAGCAGAGAAGGTTTAGTCGGGGTCCATCCCCGGGCAGGTGCCGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470438.5
CDS GCA 90 bp CCAGGGCGGCACCTGCCCGGGGATGGACCCCGACTAAACCTTCTCTaGTTTCTCTATAGAAGGATCATCTGTGTTTGCACCTCTCCGAAG +
Preference number: 5 (lower is better)
Translates to: PGRHLPGDGPRLNLL*FLYRRIICVCTSPK
Trigger: CTTCGGAGAGGTGCAAACACAGATGATCCTTCTATAGAGAAAGCAGAGAAGGTTTAGTCGGGGTCCATCCCCGGGCAGGTGCCGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS-3UTR CAA 90 bp AGCAAACCCACTCCCACAAGGGGTCCTGGGTGCTGGTTAATGCACCTGCATTTTTCCCCAAACGAGCCCTaGCCAATGCGGTCGAGCTTG +
Preference number: 5 (lower is better)
Translates to: SKPTPTRGPGCWLMHLHFSPNEP*PMRSSL
Trigger: CAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGA...AAAATGCAGGTGCATTAACCAGCACCCAGGACCCCTTGTGGGAGTGGGTTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAAGGTGCACCATCAGCTaGTCTGAGATGCCGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGRCTIS*SEMPGQ
Trigger: CTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AGGGCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGTCCCATATCCTGGGTaGTTCTTGGGACAGTGTCTG +
Preference number: 5 (lower is better)
Translates to: RAVGIENSVPDVHNSTLQVPYPG*FLGQCL
Trigger: CAGACACTGTCCCAAGAACAACCCAGGATATGGGAC...CTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCGGGAACTCACTTTACTaGGTGCCTGGAATGTCACTC +
Preference number: 5 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSGNSLY*VPGMSL
Trigger: GAGTGACATTCCAGGCACCAAGTAAAGTGAGTTCCC...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS TCA 90 bp TGTAGACCTCCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTCAATTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CRPPQTSPCQCGRAW*RAPQGPLESAQFFS
Trigger: AGAGAAGAATTGAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGGAGGTCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435225.5
CDS CCA 90 bp CATCCCTCCTTCTTCGAGAGGGTTCTGGCGTTTCTCTCTGCTCCCTaGTGCGTGTCTTCTCATGGTGCACTGCCGAGTCCTTTAAGAAGC +
Preference number: 5 (lower is better)
Translates to: HPSFFERVLAFLSAP*CVSSHGALPSPLRS
Trigger: GCTTCTTAAAGGACTCGGCAGTGCACCATGAGAAGACACGCACCAGGGAGCAGAGAGAAACGCCAGAACCCTCTCGAAGAAGGAGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS CCA 90 bp ACCATGAGGATAAACCAGGTCCCTACATGTCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCTCTGACTTCCAGCGCTTATAGCGGT +
Preference number: 5 (lower is better)
Translates to: TMRINQVPTCQSPQS*TPRHAPLTSSAYSG
Trigger: ACCGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTGACATGTAGGGACCTGGTTTATCCTCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465009.1
ENST00000495143.5
CDS CCA 90 bp AGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATGGTaGTGGAGGCAAGTTTTCTGGGCCCTGCATTCTCCTCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SCPFRCPLSSHFYSW*WRQVFWALHSPLPA
Trigger: AGCAGGCAGAGGAGAATGCAGGGCCCAGAAAACTTGCCTCCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472181.1
CDS CCA 90 bp GTCAGCTGCCCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATaGTGGTGGAGGCAAGTTTTCTGGGCCCTGCATTCTCCTCTGCCT +
Preference number: 5 (lower is better)
Translates to: VSCPFRCPLSSHFYS*WWRQVFWALHSPLP
Trigger: AGGCAGAGGAGAATGCAGGGCCCAGAAAACTTGCCTCCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGGGCAGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472181.1
CDS-3UTR CAA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCCCAATGCGGTCGAGCTaGGTGAAGAGCTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTPMRSS*VKSSSG
Trigger: CCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGG...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGNSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CTGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAAATCGGGGGTCTTTGTaGAGGCAGGCCTCCACGAAC +
Preference number: 5 (lower is better)
Translates to: LQARHSTGHLPSQHSSYGNRGSL*RQASTN
Trigger: GTTCGTGGAGGCCTGCCTCAACAAAGACCCCCGATT...TCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GCAGTGGGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: AVGIENSVPDVHNSTLQGVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...CCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CATCTCCCCACCTGCATTCTCCTCTGCCTGCTCTGTTCTTCCGGTGGGCCAAGCGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: HLPTCILLCLLCSSGGPSVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...GCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGTGGGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CATGCCAGCAGCTATCTGGGGCCCTGGGAAAAATGTGCGAGTCTTGAGCGCGGATATCCTGGGTTGTTCTaGGGACAGTGTCTGAGCACA +
Preference number: 5 (lower is better)
Translates to: HASSYLGPWEKCASLERGYPGLF*GQCLST
Trigger: TGTGCTCAGACACTGTCCCAAGAACAACCCAGGATA...TCCGCGCTCAAGACTCGCACATTTTTCCCAGGGCCCCAGATAGCTGCTGGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp GCACAACAGCACACTGCAGGGGTGGAAGGAGACGGTGACCTGGTGACCTGGCATTGTCCCTTTTGTATTTaGGTTCTGCCCTCCCATGCT +
Preference number: 5 (lower is better)
Translates to: AQQHTAGVEGDGDLVTWHCPFCI*VLPSHA
Trigger: AGCATGGGAGGGCAGAACCAAAATACAAAAGGGACA...ATGCCAGGTCACCAGGTCACCGTCTCCTTCCACCCCTGCAGTGTGCTGTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCTGCAGAGGCTTAGTCTaGGGGAGCAAACCCACTCCC +
Preference number: 5 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELCRGLV*GSKPTP
Trigger: GGGAGTGGGTTTGCTCCCCAAGACTAAGCCTCTGCA...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGGGTCCGGGAGGGACTaGCAGATCCCAAGGCTACCT +
Preference number: 5 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWGSGRD*QIPRLP
Trigger: AGGTAGCCTTGGGATCTGCAAGTCCCTCCCGGACCC...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543554.5
CDS TCA 90 bp TTCCCCTCCTGCCACACTACTGCTACAGATGCTCAGAGGACAGGTTaGGTACACACAGCAGTGGCTGACTCCACTTCACCAAGACCCCAT +
Preference number: 5 (lower is better)
Translates to: FPSCHTTATDAQRTG*VHTAVADSTSPRPH
Trigger: ATGGGGTCTTGGTGAAGTGGAGTCAGCCACTGCTGTGTGTACTCAACCTGTCCTCTGAGCATCTGTAGCAGTAGTGTGGCAGGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450497.5
CDS GCA 90 bp GGTTCTGGCGTTTCTCTCTGCTCCCTGGTGCGTGTCTTCTCATGGTaGACTGCCGAGTCCTTTAAGAAGCTATGCTTCCCTGTCATGCGT +
Preference number: 5 (lower is better)
Translates to: GSGVSLCSLVRVFSW*TAESFKKLCFPVMR
Trigger: ACGCATGACAGGGAAGCATAGCTTCTTAAAGGACTCGGCAGTGCACCATGAGAAGACACGCACCAGGGAGCAGAGAGAAACGCCAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 90 bp CCCTCCTTCTTCGAGAGGGTTCTGGCGTTTCTCTCTGCTCCCTGGTaGGTGTCTTCTCATGGTGCACTGCCGAGTCCTTTAAGAAGCTAT +
Preference number: 5 (lower is better)
Translates to: PSFFERVLAFLSAPW*VSSHGALPSPLRSY
Trigger: ATAGCTTCTTAAAGGACTCGGCAGTGCACCATGAGAAGACACGCACCAGGGAGCAGAGAGAAACGCCAGAACCCTCTCGAAGAAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 90 bp CCACAATCAGCTGCAGGAAAGCTAGAAGCTGAAACCACCCCACAGTaGTGTGAGGGAGACATCTCCGTGCAACAGTGTCACAGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: PQSAAGKLEAETTPQ*CEGDISVQQCHSLV
Trigger: GACAAGGCTGTGACACTGTTGCACGGAGATGTCTCCCTCACAGCACTGTGGGGTGGTTTCAGCTTCTAGCTTTCCTGCAGCTGATTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS CCA 90 bp AATCTCCCGCAGGATCGTGGCAATGTATGTCTCCTCCAGGGGACCTaGTTTAAGCTGTCAAGGGGTGGTCATAGGACGTCCTTGGTCACA +
Preference number: 5 (lower is better)
Translates to: NLPQDRGNVCLLQGT*FKLSRGGHRTSLVT
Trigger: TGTGACCAAGGACGTCCTATGACCACCCCTTGACAGCTTAAACCAGGTCCCCTGGAGGAGACATACATTGCCACGATCCTGCGGGAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461760.1
CDS-3UTR CAA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCTCCGAGAGTAGCACGTaGGCAGCTTTGATGTCTCGG +
Preference number: 5 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELSESST*AALMSR
Trigger: CCGAGACATCAAAGCTGCCAACGTGCTACTCTCGGA...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGGTGGAGGTCAGAGTTaGGAGGCTCCCCCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: FITAQHSFQREVDGRLLCGGGQS*EAPPWP
Trigger: TGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTCGGAATCGGGGGTCTTaGTTGAGGCAGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: FITAQHSFQREVDGRLLCRNRGS*LRQAST
Trigger: CGTGGAGGCCTGCCTCAACAAAGACCCCCGATTCCG...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGCATAGAGAACAGCGTCCCTGACGTGCACAACAGCACACTGCAGGGGTGGAAGTCAACCTGCCCAGGTTaGGACACAACTACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: GIENSVPDVHNSTLQGWKSTCPG*DTTTKN
Trigger: GTTCTTTGTAGTTGTGTCCAAACCTGGGCAGGTTGA...CTTCCACCCCTGCAGTGTGCTGTTGTGCACGTCAGGGACGCTGTTCTCTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp GTCCCCCTGTGCCCTGGGAGGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTTCACCTGTGTCCCTTTaGTATTTTGGTTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: VPLCPGRVGPSNLLLPSISPVSL*YFGSAL
Trigger: GAGGGCAGAACCAAAATACAAAAGGGACACAGGTGA...AATGCTGGGCAGTAATAAATTAGACGGCCCCACCCTCCCAGGGCACAGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS CCA 90 bp TCCATAGCTTGGTGCTCTGGGACCGGAGACAAACCCATCAGCATTTaGCAGCAAGAGGAAGGGCATGCTTTAGGTAGGAGCCAAAGTAGC +
Preference number: 5 (lower is better)
Translates to: SIAWCSGTGDKPISI*QQEEGHALGRSQSS
Trigger: GCTACTTTGGCTCCTACCTAAAGCATGCCCTTCCTCTTGCTGCCAAATGCTGATGGGTTTGTCTCCGGTCCCAGAGCACCAAGCTATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439101.5
ENST00000452891.5
CDS-3UTR CAA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGTCCAGGTCGATGATCTaGATGGCCACCACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMESRSMI*MATTSF
Trigger: AAAGGAGGTGGTGGCCATCAAGATCATCGACCTGGA...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTAGCACGTTGGCAGCTTaGATGTCTCGGTGGATCTTG +
Preference number: 5 (lower is better)
Translates to: QARHSTGHLPSQHSSYGASTLAA*MSRWIL
Trigger: CAAGATCCACCGAGACATCAAAGCTGCCAACGTGCT...AGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CTGGAGTTTCACTGGAGCCCAATGCAGGTGATGCTAGCAGACAGACACTTAACCAAAAATGTGCGAGTCTaGAGCGCGGAGCCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: LEFHWSPMQVMLADRHLTKNVRV*SAEPLK
Trigger: CTTGAGCGGCTCCGCGCTCAAGACTCGCACATTTTT...GGTTAAGTGTCTGTCTGCTAGCATCACCTGCATTGGGCTCCAGTGAAACTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS GCA 90 bp CCTTGGCAGGTCTGGGAGTACAAAAGGAGTCATTGCAGCAGATTCTaGTCCTTCCACTCAGAAAACCCAGCCCACAATCAGCTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PWQVWEYKRSHCSRF*SFHSENPAHNQLQE
Trigger: TTCCTGCAGCTGATTGTGGGCTGGGTTTTCTGAGTGGAAGGAGCAGAATCTGCTGCAATGACTCCTTTTGTACTCCCAGACCTGCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS-3UTR CAA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGTGGCCACCACCTCCTTaGTGTGGTTATCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWWPPPP*CGYRCP
Trigger: AGGGCATCGATAACCACACAAAGGAGGTGGTGGCCA...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp GGGTGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATCCAGGTCGATGATCTaGATGGCCACCACCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GWGRLIYYCPAFLPTGSRSRSMI*MATTSF
Trigger: AAAGGAGGTGGTGGCCATCAAGATCATCGACCTGGA...TCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTAACTCCTTGAAGGGCTaGCTGTGCTGGCCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FITAQHSFQREVDGRLLCNSLKG*LCWPSS
Trigger: ACTGGAGGGCCAGCACAGCAAGCCCTTCAAGGAGTT...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS GCA 90 bp GAACCCAGAGAACCTTGGCAGGTCTGGGAGTACAAAAGGAGTCATTaGAGCAGATTCTGCTCCTTCCACTCAGAAAACCCAGCCCACAAT +
Preference number: 5 (lower is better)
Translates to: EPREPWQVWEYKRSH*SRFCSFHSENPAHN
Trigger: ATTGTGGGCTGGGTTTTCTGAGTGGAAGGAGCAGAATCTGCTGCAATGACTCCTTTTGTACTCCCAGACCTGCCAAGGTTCTCTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS CCA 90 bp CTGGTTTCCTCAGCGTACAAGGAAACCGTTACAAGTAGTATCTTCTaGAAAGGGAGCGAGACAGGACTGCTCAGTTTCAGGGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: LVSSAYKETVTSSIF*KGSETGLLSFRVAT
Trigger: TGTGGCCACCCTGAAACTGAGCAGTCCTGTCTCGCTCCCTTTCCAGAAGATACTACTTGTAACGGTTTCCTTGTACGCTGAGGAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479442.1
ENST00000492127.5
CDS-3UTR CAA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp AGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGCTCGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: RHDIAQGTFQVSTVLMELVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...GAGCTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp CTGTGTGAACAGGGAAACTGGCTCCCTTGGCCCGTGGGCATTTGTACGTGCCACTTTTTAACCCTTCTTTaGTCCTGCTTGTCCCATATC +
Preference number: 5 (lower is better)
Translates to: LCEQGNWLPWPVGICTCHFLTLL*SCLSHI
Trigger: GATATGGGACAAGCAGGACAAAAGAAGGGTTAAAAA...GTGGCACGTACAAATGCCCACGGGCCAAGGGAGCCAGTTTCCCTGTTCACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS-3UTR CAA 90 bp TGCAGGCACGACATAGCACAGGGCACCTTCCAAGTCAGCACAGTTCTTATGGAGATGATGATCCATAGCTaGGTGCTCTGGTTGGCAAAT +
Preference number: 5 (lower is better)
Translates to: CRHDIAQGTFQVSTVLMEMMIHS*VLWLAN
Trigger: ATTTGCCAACCAGAGCACCAAGCTATGGATCATCAT...CTCCATAAGAACTGTGCTGACTTGGAAGGTGCCCTGTGCTATGTCGTGCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405585.5
ENST00000405883.7
CDS-3UTR CAA 90 bp TTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGGCGACTGCTTTGTGTCAGGTGGTTTCTGTaGTGTGAAAACCTCTGCACT +
Preference number: 5 (lower is better)
Translates to: FITAQHSFQREVDGRLLCVRWFL*CENLCT
Trigger: AGTGCAGAGGTTTTCACACAACAGAAACCACCTGAC...ACAAAGCAGTCGCCCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316586.9
ENST00000535007.5
ENST00000543554.5
CDS-3UTR CAA 90 bp TGGGGCCGTCTAATTTATTACTGCCCAGCATTCCTTCCAACGGGAAGTAGATGGTGCATTTTTCCTTTATaGACAGAACCAGCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: WGRLIYYCPAFLPTGSRWCIFPL*TEPAFR
Trigger: CCTGAAAGCTGGTTCTGTCAATAAAGGAAAAATGCA...CCATCTACTTCCCGTTGGAAGGAATGCTGGGCAGTAATAAATTAGACGGCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316586.9
CDS GCA 72 bp TCCCGCGGAGAGGCGCGGAGCCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTCCGCGGGGCTCCATCCCGG +
Preference number: 6 (lower is better)
Translates to: SRGEARSRLARP*GVSPLRGAPSR
Trigger: CCGGGATGGAGCCCCGCGGAGTGGACTGACGCCGCAGGGGCGAGCTAGCCGGCTCCGCGCCTCTCCGCGGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316586.9
ENST00000405883.7
ENST00000426941.1
ENST00000452891.5
CDS GCA 72 bp TCCCGCGGAGAGGCGCGGAGCCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTGCGAGGGACACCAGGGGCG +
Preference number: 6 (lower is better)
Translates to: SRGEARSRLARP*GVSPLRGTPGA
Trigger: CGCCCCTGGTGTCCCTCGCAGTGGACTGACGCCGCAGGGGCGAGCTAGCCGGCTCCGCGCCTCTCCGCGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401869.5
ENST00000424537.5
ENST00000439101.5
CDS CCA 72 bp GGACCCCGGGCCTCCCAGCCCGCGAAGCAACGGTGGTaGCGGCAGCGACCGGAGAAAGCCCGGAGGCGACGG +
Preference number: 6 (lower is better)
Translates to: GPRASQPAKQRW*RQRPEKARRRR
Trigger: CCGTCGCCTCCGGGCTTTCTCCGGTCGCTGCCGCCACCACCGTTGCTTCGCGGGCTGGGAGGCCCGGGGTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000403346.7
ENST00000442307.5
ENST00000483603.5
ENST00000535007.5
CDS TCA 72 bp GGACACCAGGGGCGCTCGGTGCCCAGTTCAGTCATCTaGGACCGACCTCCGGGGCGGCGGGCTCCATGGGTG +
Preference number: 6 (lower is better)
Translates to: GHQGRSVPSSVI*DRPPGRRAPWV
Trigger: CACCCATGGAGCCCGCCGCCCCGGAGGTCGGTCTCAGATGACTGAACTGGGCACCGAGCGCCCCTGGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401869.5
ENST00000424537.5
ENST00000439101.5
CDS GCA 72 bp TCCCGCGGAGAGGCGCGGAGCCGGCTAGCTCGCCCCTaGGGCGTCAGTCCACTCTTCCAAGGCAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SRGEARSRLARP*GVSPLFQGSFL
Trigger: GAGGAAGCTGCCTTGGAAGAGTGGACTGACGCCGCAGGGGCGAGCTAGCCGGCTCCGCGCCTCTCCGCGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436402.5
CDS CCA 72 bp TCTCCGAAGACGGGCCGGACCAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTGACGGGCTCCGCAGGC +
Preference number: 6 (lower is better)
Translates to: SPKTGRTSVDRH*DLGCLLTGSAG
Trigger: GCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCGTCTTCGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000462953.1
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000535007.5
ENST00000543554.5
CDS CCA 72 bp GACACAGGACAGGCAGGCGTCATCCCAGGCTCCACGTaGCTCCACCCCGGGCCCCCTGAGAAGGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: DTGQAGVIPGST*LHPGPPEKGQG
Trigger: ACCCTGGCCCTTCTCAGGGGGCCCGGGGTGGAGCCACGTGGAGCCTGGGATGACGCCTGCCTGTCCTGTGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS TCA 72 bp CCACCTGGGCTAGAGCGCGGGACGCGCCCAGGACAGTaGCTGCTGCTGGAAGCCGTCATGGCACTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: PPGLERGTRPGQ*LLLEAVMALPR
Trigger: CCTGGGGAGTGCCATGACGGCTTCCAGCAGCAGTCACTGTCCTGGGCGCGTCCCGCGCTCTAGCCCAGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS CCA 72 bp TCTCCGAAGACGGGCCGGACCAGCGTGGACAGGCACTaGGACCTCGGCTGCCTCTTGACGGGCTCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: SPKTGRTSVDRH*DLGCLLTGSAG
Trigger: TCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCCCGTCTTCGGAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS CCA 72 bp AGGGTCCGGGAGGGACTTGCAGATCCCAAGGCTACCTaGTGCGTCCCCGTGCCCCGTGGGCCGCCAGGTCAT +
Preference number: 6 (lower is better)
Translates to: RVREGLADPKAT*CVPVPRGPPGH
Trigger: ATGACCTGGCGGCCCACGGGGCACGGGGACGCACCAGGTAGCCTTGGGATCTGCAAGTCCCTCCCGGACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS CCA 72 bp GGTGAAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGTaGGGCCAGGGCGGGGACAGAGGGCAGACAGCGCCG +
Preference number: 6 (lower is better)
Translates to: GEELLRVHSRVL*GQGGDRGQTAP
Trigger: CGGCGCTGTCTGCCCTCTGTCCCCGCCCTGGCCCCACAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439101.5
ENST00000483603.5
CDS GCA 72 bp CGTCAGTCCACTGCGAGGGACACCAGGGGCGCTCGGTaGCCAGTTCAGTCATCTGAGACCGACCTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: RQSTARDTRGAR*PVQSSETDLRG
Trigger: GCCCCGGAGGTCGGTCTCAGATGACTGAACTGGGCACCGAGCGCCCCTGGTGTCCCTCGCAGTGGACTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000401869.5
ENST00000424537.5
ENST00000439101.5
CDS GCA 72 bp GGCCGGACCAGCGTGGACAGGCACTGGGACCTCGGCTaGCTCTTGACGGGCTCCGCAGGATGTCAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: GRTSVDRHWDLG*LLTGSAGCQSP
Trigger: AGGACTCTGACATCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGGTCCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS GCA 72 bp TCTCAAACCCAGGGCCACCTAGGGCCACAGGGGCACTaGCAGCAGGAGCCCAACGGCTCCACTCCGAGCTCC +
Preference number: 6 (lower is better)
Translates to: SQTQGHLGPQGH*QQEPNGSTPSS
Trigger: GGAGCTCGGAGTGGAGCCGTTGGGCTCCTGCTGGCAGTGCCCCTGTGGCCCTAGGTGGCCCTGGGTTTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CAA 72 bp AAGCCGTCATGGCACTCCCCAGGGTCCGGGAGGGACTaGCAGATCCCAAGGCTACCTGGTGCGTCCCCGTGC +
Preference number: 6 (lower is better)
Translates to: KPSWHSPGSGRD*QIPRLPGASPC
Trigger: GCACGGGGACGCACCAGGTAGCCTTGGGATCTGCAAGTCCCTCCCGGACCCTGGGGAGTGCCATGACGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS TCA 72 bp CCAGCGTGGACAGGCACTGGGACCTCGGCTGCCTCTTaGCGGGCTCCGCAGGATGTCAGAGTCCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: PAWTGTGTSAAS*RAPQDVRVLRA
Trigger: AGCTCTGAGGACTCTGACATCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS CAA 72 bp ACCAGCGTGGACAGGCACTGGGACCTCGGCTGCCTCTaGACGGGCTCCGCAGGATGTCAGAGTCCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: TSVDRHWDLGCL*TGSAGCQSPQS
Trigger: GCTCTGAGGACTCTGACATCCTGCGGAGCCCGTCAAGAGGCAGCCGAGGTCCCAGTGCCTGTCCACGCTGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS TCA 72 bp CTGCACTCGCTCCACCAGGTGCACCATCAGCTTGTCTaGGATGCCGGGGCAGGACTCCTCGGCCAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: LHSLHQVHHQLV*DAGAGLLGQAE
Trigger: TTCAGCCTGGCCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000423004.5
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000494699.1
ENST00000535007.5
ENST00000543554.5
CDS GCA 72 bp CACGGGGTCCAGCTGATGCCTCAGCAGGCCCTGTCCTaGAGCCTTGAGGGGGTCCCTGCCCAACACTATATC +
Preference number: 6 (lower is better)
Translates to: HGVQLMPQQALS*SLEGVPAQHYI
Trigger: GATATAGTGTTGGGCAGGGACCCCCTCAAGGCTGCAGGACAGGGCCTGCTGAGGCATCAGCTGGACCCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465009.1
CDS CAA 72 bp AACCTCTGCACTCGCTCCACCAGGTGCACCATCAGCTaGTCTGAGATGCCGGGGCAGGACTCCTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: NLCTRSTRCTIS*SEMPGQDSSAR
Trigger: CCTGGCCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGTGCAGAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000494699.1
ENST00000535007.5
ENST00000543554.5
CDS CAA 90 bp AGGGTCCACTCGAGAGTGCTGTCAAGGGGTGGTCATAGGACGTCCTaGGTCACACCGTTGTGGGACCCACCTGGGCTAGAGCGCGGGACG +
Preference number: 6 (lower is better)
Translates to: RVHSRVLSRGGHRTS*VTPLWDPPGLERGT
Trigger: CGTCCCGCGCTCTAGCCCAGGTGGGTCCCACAACGGTGTGACCAAGGACGTCCTATGACCACCCCTTGACAGCACTCTCGAGTGGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413760.5
ENST00000440109.5
ENST00000543554.5
CDS CAA 90 bp CAGGGGACCTGGTTTAAGCTGTCAAGGGGTGGTCATAGGACGTCCTaGGTCACACCGTTGTGGGACCCACCTGGGCTAGAGCGCGGGACG +
Preference number: 6 (lower is better)
Translates to: QGTWFKLSRGGHRTS*VTPLWDPPGLERGT
Trigger: CGTCCCGCGCTCTAGCCCAGGTGGGTCCCACAACGGTGTGACCAAGGACGTCCTATGACCACCCCTTGACAGCTTAAACCAGGTCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461760.1
CDS TCA 72 bp CCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCCGCA +
Preference number: 6 (lower is better)
Translates to: PQTSPCQCGRAW*RAPQGPLESAA
Trigger: TGCGGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429279.5
CDS TCA 72 bp CCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTCCG +
Preference number: 6 (lower is better)
Translates to: PQTSPCQCGRAW*RAPQGPLESAP
Trigger: CGGAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442307.5
ENST00000535007.5
CDS CCA 72 bp TTGACGGGCTCCGCAGGATGTCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCTCTGACTTCCAGCGCT +
Preference number: 6 (lower is better)
Translates to: LTGSAGCQSPQS*TPRHAPLTSSA
Trigger: AGCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTGACATCCTGCGGAGCCCGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423004.5
CDS CCA 72 bp TGCTTGTGCTTCTCTTTGAGCTGGGCCCAAGCCCGCTaGCCACGCCCTGGGCACACAGATCCTGGCTGTATC +
Preference number: 6 (lower is better)
Translates to: CLCFSLSWAQAR*PRPGHTDPGCI
Trigger: GATACAGCCAGGATCTGTGTGCCCAGGGCGTGGCCAGCGGGCTTGGGCCCAGCTCAAAGAGAAGCACAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS CCA 72 bp CCTCCCGTCTGCTCTCAGCAGGGCCAGACCACACGCTaGGGCTACTCAATTCTACACCTGCTGCTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: PPVCSQQGQTTR*GYSILHLLLCR
Trigger: ACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCTGGCCCTGCTGAGAGCAGACGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CAA 72 bp GTGAGGGAGACATCTCCGTGCAACAGTGTCACAGCCTaGTCCTTGACGGGACTCCAGGCCCAGTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: VRETSPCNSVTA*SLTGLQAQSQP
Trigger: GGGCTGGGACTGGGCCTGGAGTCCCGTCAAGGACAAGGCTGTGACACTGTTGCACGGAGATGTCTCCCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS CAA 72 bp CTGAGGACGGTGCTGACTGCCCATCAGCAGGTGACGTaGATGCAGGGTCACGTGACTAACCAGGGCGGCACC +
Preference number: 6 (lower is better)
Translates to: LRTVLTAHQQVT*MQGHVTNQGGT
Trigger: GGTGCCGCCCTGGTTAGTCACGTGACCCTGCATCAACGTCACCTGCTGATGGGCAGTCAGCACCGTCCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS CAA 90 bp TTGTGTGAAAACCTCTGCACTCGCTCCACCAGGTGCACCATCAGCTaGTCTGAGATGCCGGGGCAGGACTCCTCGGCCAGGCTGAAGGCG +
Preference number: 6 (lower is better)
Translates to: LCENLCTRSTRCTIS*SEMPGQDSSARLKA
Trigger: CGCCTTCAGCCTGGCCGAGGAGTCCTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000494699.1
ENST00000535007.5
ENST00000543554.5
CDS CAA 90 bp ATCACATTTCTGAGGACGGTGCTGACTGCCCATCAGCAGGTGACGTaGATGCAGGGTCACGTGACTAACCAGGGCGGCACCTGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: ITFLRTVLTAHQQVT*MQGHVTNQGGTCPG
Trigger: CCCCGGGCAGGTGCCGCCCTGGTTAGTCACGTGACCCTGCATCAACGTCACCTGCTGATGGGCAGTCAGCACCGTCCTCAGAAATGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS TCA 72 bp CCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: PQTSPCQCGRAW*RAPQGPLESAG
Trigger: ACCAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000426941.1
ENST00000436402.5
ENST00000436917.5
ENST00000452891.5
ENST00000495372.1
CDS TCA 72 bp CCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: PQTSPCQCGRAW*RAPQGPLESAV
Trigger: GACAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413760.5
ENST00000440109.5
ENST00000543554.5
CDS TCA 72 bp CCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PQTSPCQCGRAW*RAPQGPLESAV
Trigger: CACAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439101.5
ENST00000483603.5
CDS GCA 72 bp GAGGCAAGTTTTCTGGGCCCTGCATTCTCCTCTGCCTaGTCTGTTCTTCCGGTGGGCCAAGCAGAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: EASFLGPAFSSA*SVLPVGQAEPR
Trigger: CCTGGGCTCTGCTTGGCCCACCGGAAGAACAGAGCAGGCAGAGGAGAATGCAGGGCCCAGAAAACTTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472181.1
CDS GCA 72 bp ACCAGAATCGTCCCCTACATGACAGAGATGGCTCGTTaGCAGTGGCAAGTCCCTCCCCATGGGCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: TRIVPYMTEMAR*QWQVPPHGLAQ
Trigger: CTGGGCCAGCCCATGGGGAGGGACTTGCCACTGGCAACGAGCCATCTCTGTCATGTAGGGGACGATTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 72 bp CTGTTCTTGGGAATCAGGAACAGGACGCGCATGGGGTaGAGGTCAGAGTTTGGAGGCTCCCCCTTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LFLGIRNRTRMG*RSEFGGSPLAS
Trigger: GCTGGCCAAGGGGGAGCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000413760.5
ENST00000423004.5
ENST00000424537.5
ENST00000442307.5
ENST00000450497.5
ENST00000461760.1
ENST00000478403.5
ENST00000487962.5
ENST00000495143.5
ENST00000535007.5
ENST00000543554.5
CDS CCA 72 bp GTGGGCTGTTCTTGGGAATCAGGAACAGGACGCGCATaGGGTGGAGGTCAGAGTTTGGAGGCTCCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: VGCSWESGTGRA*GGGQSLEAPPW
Trigger: CCAAGGGGGAGCCTCCAAACTCTGACCTCCACCCCATGCGCGTCCTGTTCCTGATTCCCAAGAACAGCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000413760.5
ENST00000423004.5
ENST00000424537.5
ENST00000442307.5
ENST00000450497.5
ENST00000461760.1
ENST00000478403.5
ENST00000487962.5
ENST00000495143.5
ENST00000535007.5
ENST00000543554.5
CDS CAA 72 bp AGCTATGCTTCCCTGTCATGCGTCCAGGACAGCCCCTaGAACCCCTCCTGGGTCCGCATCTCTCATCACCCC +
Preference number: 6 (lower is better)
Translates to: SYASLSCVQDSP*NPSWVRISHHP
Trigger: GGGGTGATGAGAGATGCGGACCCAGGAGGGGTTCAAGGGGCTGTCCTGGACGCATGACAGGGAAGCATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS CAA 72 bp CACCAGAATCGTCCCCTACATGACAGAGATGGCTCGTaGCCAGTGGCAAGTCCCTCCCCATGGGCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: HQNRPLHDRDGS*PVASPSPWAGP
Trigger: TGGGCCAGCCCATGGGGAGGGACTTGCCACTGGCAACGAGCCATCTCTGTCATGTAGGGGACGATTCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CAA 90 bp GGGTCCACTCGAGAGTGCTTGAAACATGCCGCTGCACATCCCTTTTaGAGTGCCAGACCTCGAGGTGACTGGAACTCTCCGCGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GSTRECLKHAAAHPF*SARPRGDWNSPRGS
Trigger: GGAGCCCCGCGGAGAGTTCCAGTCACCTCGAGGTCTGGCACTCAAAAAGGGATGTGCAGCGGCATGTTTCAAGCACTCTCGAGTGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420551.1
CDS CAA 90 bp CCCCTAGTGCACCGCAGGGATCCCCACCTGTCCGGTGAGGAAGATTaGTCCCTCCTGCATACTGTGTCCACCCTTACAGGCCCTCACTCT +
Preference number: 6 (lower is better)
Translates to: PLVHRRDPHLSGEED*SLLHTVSTLTGPHS
Trigger: AGAGTGAGGGCCTGTAAGGGTGGACACAGTATGCAGGAGGGACAAATCTTCCTCACCGGACAGGTGGGGATCCCTGCGGTGCACTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS TCA 72 bp AGAGTCCTCAGAGCTGGACTCCTCGCCATGCCCCTCTaGCTTCCAGCGCTTATAGCGGTCGATGAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: RVLRAGLLAMPL*LPALIAVDELR
Trigger: ACGGAGCTCATCGACCGCTATAAGCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000423004.5
ENST00000465009.1
ENST00000478403.5
ENST00000487962.5
ENST00000495143.5
ENST00000535007.5
ENST00000543554.5
CDS TCA 72 bp TCCCCTAGTGCACCGCAGGGATCCCCACCTGTCCGGTaGGGAAGATTTGTCCCTCCTGCATACTGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: SPSAPQGSPPVR*GRFVPPAYCVH
Trigger: GTGGACACAGTATGCAGGAGGGACAAATCTTCCTCACCGGACAGGTGGGGATCCCTGCGGTGCACTAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS TCA 72 bp CCCCAAACGAGCCCTTGCCAATGCGGTCGAGCTTGGTaGAGAGCTCCTCAGGGTCCACTCGAGAGTGCTCAA +
Preference number: 6 (lower is better)
Translates to: PQTSPCQCGRAW*RAPQGPLESAQ
Trigger: TTGAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCTCGACCGCATTGGCAAGGGCTCGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435225.5
CDS TCA 72 bp AGGAAGCCCCCTGCTCCACCAGAATCGTCCCCTACATaGCAGAGATGGCTCGTTGCCAGTGGCAAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: RKPPAPPESSPT*QRWLVASGKSL
Trigger: GAGGGACTTGCCACTGGCAACGAGCCATCTCTGTCATGTAGGGGACGATTCTGGTGGAGCAGGGGGCTTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 72 bp TGGTGCTCTGGGACCGGAGACAAACCCATCAGCATTTaGCAGCAAGAGGAAGGGCATGCTCCAGGGTGGGAG +
Preference number: 6 (lower is better)
Translates to: WCSGTGDKPISI*QQEEGHAPGWE
Trigger: CTCCCACCCTGGAGCATGCCCTTCCTCTTGCTGCCAAATGCTGATGGGTTTGTCTCCGGTCCCAGAGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450497.5
ENST00000479442.1
CDS CAA 90 bp CCCATCCCTGCCAAGAACCCTGAACAGGAAAGGGCTCTCTCGGCCTaGCCCATCTTCCCCTCCTGCCACACTACTGCTACAGATGCTCAG +
Preference number: 6 (lower is better)
Translates to: PIPAKNPEQERALSA*PIFPSCHTTATDAQ
Trigger: CTGAGCATCTGTAGCAGTAGTGTGGCAGGAGGGGAAGATGGGCAAGGCCGAGAGAGCCCTTTCCTGTTCAGGGTTCTTGGCAGGGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450497.5
CDS CAA 90 bp ATCCATAGCTTGGTGCTCTGGGACCGGAGACAAACCCATCAGCATTaGGCAGCAAGAGGAAGGGCATGCTCCAGGGTGGGAGTCACAGGC +
Preference number: 6 (lower is better)
Translates to: IHSLVLWDRRQTHQH*AARGRACSRVGVTG
Trigger: GCCTGTGACTCCCACCCTGGAGCATGCCCTTCCTCTTGCTGCCAAATGCTGATGGGTTTGTCTCCGGTCCCAGAGCACCAAGCTATGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450497.5
ENST00000479442.1
CDS CAA 90 bp AGGAGCCCAACGGCTCCACTCCGAGCTCCAGGGCTCTTCCTGCATTaGGCTTTTACGACAAATCCCAACGACAAGCGACTTCGCCCACTG +
Preference number: 6 (lower is better)
Translates to: RSPTAPLRAPGLFLH*AFTTNPNDKRLRPL
Trigger: CAGTGGGCGAAGTCGCTTGTCGTTGGGATTTGTCGTAAAAGCCAAATGCAGGAAGAGCCCTGGAGCTCGGAGTGGAGCCGTTGGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS GCA 72 bp CTGTTGTGTGAAAACCTCTGCACTCGCTCCACCAGGTaGACCATCAGCTTGTCTGAGATGCCGGGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: LLCENLCTRSTR*TISLSEMPGQD
Trigger: GTCCTGCCCCGGCATCTCAGACAAGCTGATGGTGCACCTGGTGGAGCGAGTGCAGAGGTTTTCACACAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000494699.1
ENST00000535007.5
ENST00000543554.5
CDS GCA 72 bp CTGCCGAGTCCTTTAAGAAGCTATGCTTCCCTGTCATaGGTCCAGGACAGCCCCTTGAACCCCTCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LPSPLRSYASLS*VQDSPLNPSWV
Trigger: GACCCAGGAGGGGTTCAAGGGGCTGTCCTGGACGCATGACAGGGAAGCATAGCTTCTTAAAGGACTCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 72 bp GCCAGACCACACGCTGGGGCTACTCAATTCTACACCTaGTGCTGTGCCGTGCACCACAGGGAACCAACAACT +
Preference number: 6 (lower is better)
Translates to: ARPHAGATQFYT*CCAVHHREPTT
Trigger: AGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CAA 72 bp GCCAAGAACCCTGAACAGGAAAGGGCTCTCTCGGCCTaGCCCATCTTCCCCTCCTGCCACACTACTGCTACA +
Preference number: 6 (lower is better)
Translates to: AKNPEQERALSA*PIFPSCHTTAT
Trigger: TGTAGCAGTAGTGTGGCAGGAGGGGAAGATGGGCAAGGCCGAGAGAGCCCTTTCCTGTTCAGGGTTCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450497.5
CDS GCA 72 bp AGCTTGGTGAAGAGCTCCTCAGGGTCCACTCGAGAGTaGTGTCAAGGGGTGGTCATAGGACGTCCTTGGTCA +
Preference number: 6 (lower is better)
Translates to: SLVKSSSGSTRE*CQGVVIGRPWS
Trigger: TGACCAAGGACGTCCTATGACCACCCCTTGACAGCACTCTCGAGTGGACCCTGAGGAGCTCTTCACCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413760.5
ENST00000440109.5
ENST00000543554.5
CDS GCA 72 bp ATCCCCACCTGTCCGGTGAGGAAGATTTGTCCCTCCTaGATACTGTGTCCACCCTTACAGGCCCTCACTCTC +
Preference number: 6 (lower is better)
Translates to: IPTCPVRKICPS*ILCPPLQALTL
Trigger: GAGAGTGAGGGCCTGTAAGGGTGGACACAGTATGCAGGAGGGACAAATCTTCCTCACCGGACAGGTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS GCA 72 bp AAACCACCCCACAGTGCTGTGAGGGAGACATCTCCGTaGAACAGTGTCACAGCCTTGTCCTTGACGGGACTC +
Preference number: 6 (lower is better)
Translates to: KPPHSAVRETSP*NSVTALSLTGL
Trigger: GAGTCCCGTCAAGGACAAGGCTGTGACACTGTTGCACGGAGATGTCTCCCTCACAGCACTGTGGGGTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS GCA 72 bp ACACGCTGGGGCTACTCAATTCTACACCTGCTGCTGTaGCGTGCACCACAGGGAACCAACAACTCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: TRWGYSILHLLL*RAPQGTNNSSQ
Trigger: TTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS GCA 72 bp AGACCACACGCTGGGGCTACTCAATTCTACACCTGCTaGTGTGCCGTGCACCACAGGGAACCAACAACTCCA +
Preference number: 6 (lower is better)
Translates to: RPHAGATQFYTC*CAVHHREPTTP
Trigger: TGGAGTTGTTGGTTCCCTGTGGTGCACGGCACAGCAGCAGGTGTAGAATTGAGTAGCCCCAGCGTGTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS GCA 72 bp GCCCAACGGCTCCACTCCGAGCTCCAGGGCTCTTCCTaGATTTGGCTTTTACGACAAATCCCAACGACAAGC +
Preference number: 6 (lower is better)
Translates to: AQRLHSELQGSS*IWLLRQIPTTS
Trigger: GCTTGTCGTTGGGATTTGTCGTAAAAGCCAAATGCAGGAAGAGCCCTGGAGCTCGGAGTGGAGCCGTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 72 bp TTCTTCGAGAGGGTTCTGGCGTTTCTCTCTGCTCCCTaGTGCGTGTCTTCTCATGGTGCACTGCCGAGTCCT +
Preference number: 6 (lower is better)
Translates to: FFERVLAFLSAP*CVSSHGALPSP
Trigger: AGGACTCGGCAGTGCACCATGAGAAGACACGCACCAGGGAGCAGAGAGAAACGCCAGAACCCTCTCGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS CCA 72 bp ATAAACCAGGTCCCTACATGTCAGAGTCCTCAGAGCTaGACTCCTCGCCATGCCCCTCTGACTTCCAGCGCT +
Preference number: 6 (lower is better)
Translates to: INQVPTCQSPQS*TPRHAPLTSSA
Trigger: AGCGCTGGAAGTCAGAGGGGCATGGCGAGGAGTCCAGCTCTGAGGACTCTGACATGTAGGGACCTGGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465009.1
ENST00000495143.5
CDS CCA 72 bp CGTGCACCACAGGGAACCAACAACTCCAGCCAAGTGTaGCCCTTTCCTACACTCAGTCCACAGCTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: RAPQGTNNSSQV*PFPTLSPQLVS
Trigger: GGAAACCAGCTGTGGACTGAGTGTAGGAAAGGGCCACACTTGGCTGGAGTTGTTGGTTCCCTGTGGTGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS CCA 72 bp TCCATAGCTTGGTGCTTGAGGACAGTGATCTCCTGCTaGATGTCCTCGATCTCATCCTCGGCCTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SIAWCLRTVISC*MSSISSSASSR
Trigger: CCTGGAGGAGGCCGAGGATGAGATCGAGGACATCCAGCAGGAGATCACTGTCCTCAAGCACCAAGCTATGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496159.1
CDS TCA 72 bp CATACTGTGTCCACCCTTACAGGCCCTCACTCTCCATaGTGGCTCAGCACAGGTGACTATCCTGACCTCCTC +
Preference number: 6 (lower is better)
Translates to: HTVSTLTGPHSP*WLSTGDYPDLL
Trigger: GAGGAGGTCAGGATAGTCACCTGTGCTGAGCCATCATGGAGAGTGAGGGCCTGTAAGGGTGGACACAGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440109.5
ENST00000543554.5
CDS TCA 72 bp CGTTACAAGAGCCACATCCACCCCCAGCAGGACCTTTaGTGTCTCGGTGGATCTTGCGTTCGGAGTGCAGAT +
Preference number: 6 (lower is better)
Translates to: RYKSHIHPQQDL*CLGGSCVRSAD
Trigger: ATCTGCACTCCGAACGCAAGATCCACCGAGACATCAAAGGTCCTGCTGGGGGTGGATGTGGCTCTTGTAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000479442.1
ENST00000492127.5
ENST00000496159.1
CDS GCA 72 bp TTCGAGAGGGTTCTGGCGTTTCTCTCTGCTCCCTGGTaGGTGTCTTCTCATGGTGCACTGCCGAGTCCTTTA +
Preference number: 6 (lower is better)
Translates to: FERVLAFLSAPW*VSSHGALPSPL
Trigger: TAAAGGACTCGGCAGTGCACCATGAGAAGACACGCACCAGGGAGCAGAGAGAAACGCCAGAACCCTCTCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 72 bp TCCTGGCTGTATCACATTTCTGAGGACGGTGCTGACTaGCCATCAGCAGGTGACGTTGATGCAGGGTCACGT +
Preference number: 6 (lower is better)
Translates to: SWLYHISEDGAD*PSAGDVDAGSR
Trigger: ACGTGACCCTGCATCAACGTCACCTGCTGATGGGCAGTCAGCACCGTCCTCAGAAATGTGATACAGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478403.5
CDS CAA 72 bp CGAGAGTGCTTGAAACATGCCGCTGCACATCCCTTTTaGAGTGCCAGACCTCGAGGTGACTGGAACTCTCCG +
Preference number: 6 (lower is better)
Translates to: RECLKHAAAHPF*SARPRGDWNSP
Trigger: CGGAGAGTTCCAGTCACCTCGAGGTCTGGCACTCAAAAAGGGATGTGCAGCGGCATGTTTCAAGCACTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420551.1
CDS CCA 72 bp CCCAGGTACTCCATGATGATCCATAGCTTGGTGCTCTaGGACCGGAGACAAACCCATCAGCATTTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PRYSMMIHSLVL*DRRQTHQHLAA
Trigger: TGCTGCCAAATGCTGATGGGTTTGTCTCCGGTCCCAGAGCACCAAGCTATGGATCATCATGGAGTACCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439101.5
ENST00000450497.5
ENST00000479442.1
CDS CAA 72 bp ACGGCTCCACTCCGAGCTCCAGGGCTCTTCCTGCATTaGGCTTTTACGACAAATCCCAACGACAAGCGACTT +
Preference number: 6 (lower is better)
Translates to: TAPLRAPGLFLH*AFTTNPNDKRL
Trigger: AAGTCGCTTGTCGTTGGGATTTGTCGTAAAAGCCAAATGCAGGAAGAGCCCTGGAGCTCGGAGTGGAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487962.5
ENST00000492127.5
CDS TCA 72 bp CTCAGAACAAAAACAAACGACCTTCCGTCCCCTATCTaGACAGCAGTGCGCTTCAGCGGGTGGATGTCAGGT +
Preference number: 6 (lower is better)
Translates to: LRTKTNDLPSPI*TAVRFSGWMSG
Trigger: ACCTGACATCCACCCGCTGAAGCGCACTGCTGTTCAGATAGGGGACGGAAGGTCGTTTGTTTTTGTTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000316586.9
ENST00000401869.5
ENST00000403346.7
ENST00000405585.5
ENST00000405883.7
ENST00000465009.1
ENST00000470438.5
ENST00000478403.5
ENST00000487962.5
ENST00000494699.1
ENST00000535007.5
ENST00000543554.5
CDS GCA 72 bp TTCTCATGGTGCACTGCCGAGTCCTTTAAGAAGCTATaGTTCCCTGTCATGCGTCCAGGACAGCCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: FSWCTAESFKKL*FPVMRPGQPLE
Trigger: TTCAAGGGGCTGTCCTGGACGCATGACAGGGAAGCATAGCTTCTTAAAGGACTCGGCAGTGCACCATGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440109.5
CDS GCA 72 bp CACCTGCCCGGGGATGGACCCCGACTAAACCTTCTCTaGTTTCTCTATAGAAGGATCATCTGTGTTTGCACC +
Preference number: 6 (lower is better)
Translates to: HLPGDGPRLNLL*FLYRRIICVCT
Trigger: GGTGCAAACACAGATGATCCTTCTATAGAGAAAGCAGAGAAGGTTTAGTCGGGGTCCATCCCCGGGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000470438.5
ENST00000478403.5
CDS CCA 72 bp CCATTTCGATGTCCGCTCAGCTCCCATTTCTACTCATaGTGGTGGAGGCAAGTTTTCTGGGCCCTGCATTCT +
Preference number: 6 (lower is better)
Translates to: PFRCPLSSHFYS*WWRQVFWALHS
Trigger: AGAATGCAGGGCCCAGAAAACTTGCCTCCACCACCATGAGTAGAAATGGGAGCTGAGCGGACATCGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472181.1
CDS CAA 90 bp GGAACCCAGAGAACCTTGGCAGGTCTGGGAGTACAAAAGGAGTCATaGCAGCAGATTCTGCTCCTTCCACTCAGAAAACCCAGCCCACAA +
Preference number: 6 (lower is better)
Translates to: GTQRTLAGLGVQKES*QQILLLPLRKPSPQ
Trigger: TTGTGGGCTGGGTTTTCTGAGTGGAAGGAGCAGAATCTGCTGCAATGACTCCTTTTGTACTCCCAGACCTGCCAAGGTTCTCTGGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS CCA 72 bp CAGATGCTCAGAGGACAGGTTGAGTACACACAGCAGTaGCTGACTCCACTTCACCAAGACCCCATCAAAAAC +
Preference number: 6 (lower is better)
Translates to: QMLRGQVEYTQQ*LTPLHQDPIKN
Trigger: GTTTTTGATGGGGTCTTGGTGAAGTGGAGTCAGCCACTGCTGTGTGTACTCAACCTGTCCTCTGAGCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450497.5
CDS GCA 72 bp GAACCTTGGCAGGTCTGGGAGTACAAAAGGAGTCATTaGAGCAGATTCTGCTCCTTCCACTCAGAAAACCCA +
Preference number: 6 (lower is better)
Translates to: EPWQVWEYKRSH*SRFCSFHSENP
Trigger: TGGGTTTTCTGAGTGGAAGGAGCAGAATCTGCTGCAATGACTCCTTTTGTACTCCCAGACCTGCCAAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462953.1
CDS CCA 72 bp TCAGCGTACAAGGAAACCGTTACAAGTAGTATCTTCTaGAAAGGGAGCGAGACAGGACTGCTCAGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: SAYKETVTSSIF*KGSETGLLSFR
Trigger: CCTGAAACTGAGCAGTCCTGTCTCGCTCCCTTTCCAGAAGATACTACTTGTAACGGTTTCCTTGTACGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479442.1
ENST00000492127.5