RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK24 (Homo sapiens)

Ensembl gene IDs: ENSG00000102572

Ensembl transcript IDs: ENST00000376547.7, ENST00000376554.8, ENST00000397517.6, ENST00000418038.5, ENST00000444574.1, ENST00000481288.1, ENST00000539966.6

Found 793 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTGCCATGGTCCCTTCCAGGCCCACGCCCGAGGAGGGAGCTGCCTaGGCTCCCAAGTCCCTGTCTGATGCGGGGCAGCAGCCAGGCCCA +
Preference number: 1 (lower is better)
Translates to: AAMVPSRPTPEEGAA*APKSLSDAGQQPGP
Trigger: TGGGCCTGGCTGCTGCCCCGCATCAGACAGGGACTTGGGAGCCCAGGCAGCTCCCTCCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GCCCACATCCTTCAGTCACGGACATGCCCCAGCCCAGGGCCCTGGTaGAGGGAGAGCTGCTCTCTGTGCCCTCCTGGGGCAGGTGCCCGC +
Preference number: 1 (lower is better)
Translates to: AHILQSRTCPSPGPW*RESCSLCPPGAGAR
Trigger: GCGGGCACCTGCCCCAGGAGGGCACAGAGAGCAGCTCTCCCTGCACCAGGGCCCTGGGCTGGGGCATGTCCGTGACTGAAGGATGTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAGGCTaGAGGCTCTGGGCAGCTGAGCCAGGAGCAGCTCAGGGCTGGCAC +
Preference number: 1 (lower is better)
Translates to: QSTALVSQRLSTSPG*RLWAAEPGAAQGWH
Trigger: GTGCCAGCCCTGAGCTGCTCCTGGCTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACTCAGCCTCTGGGAGACGAGGGCCGTGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 90 bp GGCGGGACTTGCCACCCGGGCCATCACGTACAGGCAAACACTGGCTaGCATGGTCCCTTCCAGGCCCACGCCCGAGGAGGGAGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: GGTCHPGHHVQANTG*HGPFQAHARGGSCL
Trigger: CAGGCAGCTCCCTCCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GACTTGCCACCCGGGCCATCACGTACAGGCAAACACTGGCTGCCATaGTCCCTTCCAGGCCCACGCCCGAGGAGGGAGCTGCCTGGGCTC +
Preference number: 1 (lower is better)
Translates to: DLPPGPSRTGKHWLP*SLPGPRPRRELPGL
Trigger: GAGCCCAGGCAGCTCCCTCCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp TCCTGGCGGGACTTGCCACCCGGGCCATCACGTACAGGCAAACACTaGCTGCCATGGTCCCTTCCAGGCCCACGCCCGAGGAGGGAGCTG +
Preference number: 1 (lower is better)
Translates to: SWRDLPPGPSRTGKH*LPWSLPGPRPRREL
Trigger: CAGCTCCCTCCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp AACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCTCCAGGCCTGGGGACTTCTCCCTGG +
Preference number: 1 (lower is better)
Translates to: NCIISVSKCASSPGR*PGHSAAPGLGTSPW
Trigger: CCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 90 bp GCAGCAGCACGCCTGGTCCTCCTGGGGGTGTGGAGGACAGCCCAGTaGCAAATCACCCTCAGGTCACACAGAGCGGCTTCCCAGCACACA +
Preference number: 1 (lower is better)
Translates to: AAARLVLLGVWRTAQ*QITLRSHRAASQHT
Trigger: TGTGTGCTGGGAAGCCGCTCTGTGTGACCTGAGGGTGATTTGTCACTGGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTGCTGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CCA 90 bp ACCTGGGGTCCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATaGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTGCAC +
Preference number: 1 (lower is better)
Translates to: TWGPTARHQQAILFS*QKVGSQLPCALTLH
Trigger: GTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGGACCCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp GCGGGCAGTGTCACTGCAGCAAGGTACTTCCAGCTCCACACTGAGTaGGTGCCCAGGCCAGTGGGTCTCCACTGTACCTCAGGAACGCCT +
Preference number: 1 (lower is better)
Translates to: AGSVTAARYFQLHTE*VPRPVGLHCTSGTP
Trigger: AGGCGTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTGCAGTGACACTGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CACACAGAGCGGCTTCCCAGCACACATCCACTGCCTCCAAACGCCTaGACTTGTGCCAGATGGCAGTCAGGAGGGGCTTGGTTCCCATGG +
Preference number: 1 (lower is better)
Translates to: HTERLPSTHPLPPNA*TCARWQSGGAWFPW
Trigger: CCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGGAAGCCGCTCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 90 bp TGTTGGGATGGATCTTTCCCTCCTTCAGCTTCCGCCTGCTGGCAATaGATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGC +
Preference number: 1 (lower is better)
Translates to: CWDGSFPPSASACWQ*MGSCAPISASVSQG
Trigger: GCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp CAAGCAGTCCAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGGCCTaGGGACTTCTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACA +
Preference number: 1 (lower is better)
Translates to: QAVQGADLGTRQLQA*GLLPGVFQSVSSHT
Trigger: TGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CCA 90 bp CAGCAAGGTACTTCCAGCTCCACACTGAGTGAGTGCCCAGGCCAGTaGGTCTCCACTGTACCTCAGGAACGCCTGGGTGCTGGCTGTTCC +
Preference number: 1 (lower is better)
Translates to: QQGTSSSTLSECPGQ*VSTVPQERLGAGCS
Trigger: GGAACAGCCAGCACCCAGGCGTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp CCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTaGGGTCCCAACTTCCCTGCGCCCTTACCCTGCACGGTGTTGGCT +
Preference number: 1 (lower is better)
Translates to: PLPDTSRRFCSHGRK*GPNFPAPLPCTVLA
Trigger: AGCCAACACCGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp TGGAGCGGGCAGTGTCACTGCAGCAAGGTACTTCCAGCTCCACACTaGGTGAGTGCCCAGGCCAGTGGGTCTCCACTGTACCTCAGGAAC +
Preference number: 1 (lower is better)
Translates to: WSGQCHCSKVLPAPH*VSAQASGSPLYLRN
Trigger: GTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTGCAGTGACACTGCCCGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GCGGCTTCCCAGCACACATCCACTGCCTCCAAACGCCTGCACTTGTaGCAGATGGCAGTCAGGAGGGGCTTGGTTCCCATGGATACTCCT +
Preference number: 1 (lower is better)
Translates to: AASQHTSTASKRLHL*QMAVRRGLVPMDTP
Trigger: AGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGGAAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 90 bp AATCACCCTCAGGTCACACAGAGCGGCTTCCCAGCACACATCCACTaGCTCCAAACGCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGG +
Preference number: 1 (lower is better)
Translates to: NHPQVTQSGFPAHIH*LQTPALVPDGSQEG
Trigger: CCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGGAAGCCGCTCTGTGTGACCTGAGGGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 90 bp GCAGTGTCACTGCAGCAAGGTACTTCCAGCTCCACACTGAGTGAGTaGCCAGGCCAGTGGGTCTCCACTGTACCTCAGGAACGCCTGGGT +
Preference number: 1 (lower is better)
Translates to: AVSLQQGTSSSTLSE*PGQWVSTVPQERLG
Trigger: ACCCAGGCGTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTGCAGTGACACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CCCCACCCTTCCCTGCCAACTAAGCGTTTAGACCTGGGGTCCCACTaGCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGG +
Preference number: 1 (lower is better)
Translates to: PHPSLPTKRLDLGSH*PTPAGDSVLMAESG
Trigger: CCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGGACCCCAGGTCTAAACGCTTAGTTGGCAGGGAAGGGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp TGCTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCCTaGCCCCTAGCTGGGCTGCAGCGCATCCTAACAATGCTCCAGGGG +
Preference number: 1 (lower is better)
Translates to: CSELFGGSMDTGACP*PLAGLQRILTMLQG
Trigger: CCCCTGGAGCATTGTTAGGATGCGCTGCAGCCCAGCTAGGGGGCAGGGACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp TCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTaGTCCTCCTGGGGGTGTGGAGGACAGCCCAGTGACAAATCACCC +
Preference number: 1 (lower is better)
Translates to: SAWTPEDELSRQQHA*SSWGCGGQPSDKSP
Trigger: GGGTGATTTGTCACTGGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
3UTR TCA 90 bp TACAGCAATCGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTaGGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTGGGCACTCGG +
Preference number: 1 (lower is better)
Translates to: YSNRTDQQPPTASSR*ASAQAVQGADLGTR
Trigger: CCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 90 bp TACAGGCTGGCACAGATGAACCCCTACCAAGGAGGCTTCCAGACATaGCACACACAGCTAACACAGGGAACACACCTGCGCCCGCTCCCG +
Preference number: 1 (lower is better)
Translates to: YRLAQMNPYQGGFQT*HTQLTQGTHLRPLP
Trigger: CGGGAGCGGGCGCAGGTGTGTTCCCTGTGTTAGCTGTGTGTGTCATGTCTGGAAGCCTCCTTGGTAGGGGTTCATCTGTGCCAGCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR TCA 90 bp CACTTCCTGGGTAGGGTGCCTGGCCCCTCAAAACGAGTGCTGCTCTaGGCTTGTTGGGATGGATCTTTCCCTCCTTCAGCTTCCGCCTGC +
Preference number: 1 (lower is better)
Translates to: HFLGRVPGPSKRVLL*ACWDGSFPPSASAC
Trigger: GCAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCCAACAAGCTCAGAGCAGCACTCGTTTTGAGGGGCCAGGCACCCTACCCAGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CTAACTGGCGTTCCCGTGTTGCAGGTGGATGGAAGTGATCCGCAGTaGCACCAGCTCTGCCTCGCGACCCCACGTGTTGAGTCACAAAGA +
Preference number: 1 (lower is better)
Translates to: LTGVPVLQVDGSDPQ*HQLCLATPRVESQR
Trigger: TCTTTGTGACTCAACACGTGGGGTCGCGAGGCAGAGCTGGTGGCACTGCGGATCACTTCCATCCACCTGCAACACGGGAACGCCAGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GGTCTCCACTGTACCTCAGGAACGCCTGGGTGCTGGCTGTTCCCTTaGTCTTCTGCTGAAGTGGCAGATTACCAACCAGGCGGCCTGACT +
Preference number: 1 (lower is better)
Translates to: GLHCTSGTPGCWLFP*SSAEVADYQPGGLT
Trigger: AGTCAGGCCGCCTGGTTGGTAATCTGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTACAGTGGAGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GTGCCCAGGCCAGTGGGTCTCCACTGTACCTCAGGAACGCCTGGGTaGTGGCTGTTCCCTTGCTCTTCTGCTGAAGTGGCAGATTACCAA +
Preference number: 1 (lower is better)
Translates to: VPRPVGLHCTSGTPG*WLFPCSSAEVADYQ
Trigger: TTGGTAATCTGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp CCTCCAAACGCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGGCTTaGTTCCCATGGATACTCCTACAACAAGTTGGGAGGGGGCAGGGA +
Preference number: 1 (lower is better)
Translates to: PPNACTCARWQSGGA*FPWILLQQVGRGQG
Trigger: TCCCTGCCCCCTCCCAACTTGTTGTAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CCA 90 bp ACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTaGGGGTGTGGAGGACAGCCCAGTGACAAATCACCCTCAGGTCAC +
Preference number: 1 (lower is better)
Translates to: TPEDELSRQQHAWSS*GCGGQPSDKSPSGH
Trigger: GTGACCTGAGGGTGATTTGTCACTGGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CCA 90 bp CCCAGGCCAGTGGGTCTCCACTGTACCTCAGGAACGCCTGGGTGCTaGCTGTTCCCTTGCTCTTCTGCTGAAGTGGCAGATTACCAACCA +
Preference number: 1 (lower is better)
Translates to: PRPVGLHCTSGTPGC*LFPCSSAEVADYQP
Trigger: TGGTTGGTAATCTGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GGTGCCTGGCCCCTCAAAACGAGTGCTGCTCTGAGCTTGTTGGGATaGATCTTTCCCTCCTTCAGCTTCCGCCTGCTGGCAATGCATGGG +
Preference number: 1 (lower is better)
Translates to: GAWPLKTSAALSLLG*IFPSFSFRLLAMHG
Trigger: CCCATGCATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCCAACAAGCTCAGAGCAGCACTCGTTTTGAGGGGCCAGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GGGAACACGGTTTCCAGTGGCTTTGGCCCCTACTCGGGAAACGTCTaGCTGTTCTCGATGGTGATGGGGTGGCTGCCATTCCCTTGGTTT +
Preference number: 1 (lower is better)
Translates to: GNTVSSGFGPYSGNV*LFSMVMGWLPFPWF
Trigger: AAACCAAGGGAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp TCTCATGGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTaGACGGTGTTGGCTGAGGCCCTAGACATCTTGCTTGGAGATCTC +
Preference number: 1 (lower is better)
Translates to: SHGRKWGPNFPAPLP*TVLAEALDILLGDL
Trigger: GAGATCTCCAAGCAAGATGTCTAGGGCCTCAGCCAACACCGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GTAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTaGCCCCTACTCGGGAAACGTCTGCCTGTTCTCGATGGTGATGGG +
Preference number: 1 (lower is better)
Translates to: VVSVGLHREHGFQWL*PLLGKRLPVLDGDG
Trigger: CCCATCACCATCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp CATGGGGTAGTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTaGCTTTGGCCCCTACTCGGGAAACGTCTGCCTGTTCTCGATGGT +
Preference number: 1 (lower is better)
Translates to: HGVVSVGLHREHGFQ*LWPLLGKRLPVLDG
Trigger: ACCATCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACACTACCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp CCTTGCCAGCCTGCCTCTGCTCGGCTACTCGCTCACCATCCCCTCTaGGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTT +
Preference number: 1 (lower is better)
Translates to: PCQPASARLLAHHPL*VREHPERLRVQAAL
Trigger: AAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCCGAGCAGAGGCAGGCTGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GTCACTTTGGCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTaGTCAGAGTTGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCC +
Preference number: 1 (lower is better)
Translates to: VTLAKGRNEPPVRQA*SELFGGSMDTGACP
Trigger: GGGACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGCCAAAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp CCCAGCACACATCCACTGCCTCCAAACGCCTGCACTTGTGCCAGATaGCAGTCAGGAGGGGCTTGGTTCCCATGGATACTCCTACAACAA +
Preference number: 1 (lower is better)
Translates to: PSTHPLPPNACTCAR*QSGGAWFPWILLQQ
Trigger: TTGTTGTAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CCA 90 bp CTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTaGGGAGTCCGTCCTGCATTGTGCAGGATGTTCAGCGGCATCCCT +
Preference number: 1 (lower is better)
Translates to: LAVQILKGLGQGQVI*GVRPALCRMFSGIP
Trigger: AGGGATGCCGCTGAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTTGTCCCAGGCCTTTCAGGATCTGGACTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp GCCTCGCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGTGTATTaGTGGCCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTGGAA +
Preference number: 1 (lower is better)
Translates to: ASRPHVLSHKESLVY*WPDTLVSAVAAFLE
Trigger: TTCCAGGAAAGCAGCCACTGCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGACTCTTTGTGACTCAACACGTGGGGTCGCGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTaGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACGAAGAGC +
Preference number: 1 (lower is better)
Translates to: AHLRTRNAPSLWSSD*CSWKQTATCKRTKS
Trigger: GCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp CACCCGAGGCCCTCAACTCTAGGGAAGACTGACATTATCATCCACTaGAGGACAACTTCTGCCCTAGGAAGGGCCACCTGTCTTCTGCCT +
Preference number: 1 (lower is better)
Translates to: HPRPSTLGKTDIIIH*RTTSALGRATCLLP
Trigger: AGGCAGAAGACAGGTGGCCCTTCCTAGGGCAGAAGTTGTCCTTCAGTGGATGATAATGTCAGTCTTCCCTAGAGTTGAGGGCCTCGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CAGATGCACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTaGACCCCAAACCACACTGGTGTCCACCTCATTGGCAGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: QMHFQENQNPARSGQ*TPNHTGVHLIGSSQ
Trigger: CTGGCTGCTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCTTGGAAGTGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 90 bp CTGCTGGTGATGTCACTTTGGCAAAGGGACGAAATGAGCCACCAGTaGGTCAGGCCTGCTCAGAGTTGTTTGGAGGTAGCATGGACACAG +
Preference number: 1 (lower is better)
Translates to: LLVMSLWQRDEMSHQ*VRPAQSCLEVAWTQ
Trigger: CTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGCCAAAGTGACATCACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp AGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTaGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTGCCGTGT +
Preference number: 1 (lower is better)
Translates to: RTRNAPSLWSSDWCS*KQTATCKRTKSLPC
Trigger: ACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp ACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTCACTTTaGCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAG +
Preference number: 1 (lower is better)
Translates to: TRWCNCFESLLVMSL*QRDEMSHQCVRPAQ
Trigger: CTGAGCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp AAGCGATGCCCACCAAAGTGTCAGGAGTCCGTCCAAACAAAAGGTTaGCTAACTGGCGTTCCCGTGTTGCAGGTGGATGGAAGTGATCCG +
Preference number: 1 (lower is better)
Translates to: KRCPPKCQESVQTKG*LTGVPVLQVDGSDP
Trigger: CGGATCACTTCCATCCACCTGCAACACGGGAACGCCAGTTAGTCAACCTTTTGTTTGGACGGACTCCTGACACTTTGGTGGGCATCGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp TGCACGGTGTTGGCTGAGGCCCTAGACATCTTGCTTGGAGATCTCTaGCATAACGTGTCCGGGATGATGAAGCTAAGCCCCAGTGAGACT +
Preference number: 1 (lower is better)
Translates to: CTVLAEALDILLGDL*HNVSGMMKLSPSET
Trigger: AGTCTCACTGGGGCTTAGCTTCATCATCCCGGACACGTTATGTCAGAGATCTCCAAGCAAGATGTCTAGGGCCTCAGCCAACACCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp ACCATAGCACCTGCCCACCTGAGAACCAGGAACGCACCCTCTCTGTaGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTGCAAA +
Preference number: 1 (lower is better)
Translates to: TIAPAHLRTRNAPSL*SSDWCSWKQTATCK
Trigger: TTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp CTGTCCCCTCCCTATAGCTTAGAGGCCACTAGACCAGCAGATAGCTaGGCTACATCCCCAAGCTCACCCACTAACTTCCTTGCTTCCAAA +
Preference number: 1 (lower is better)
Translates to: LSPPYSLEATRPADS*ATSPSSPTNFLASK
Trigger: TTTGGAAGCAAGGAAGTTAGTGGGTGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCTAGTGGCCTCTAAGCTATAGGGAGGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 90 bp ACACAGCTAACACAGGGAACACACCTGCGCCCGCTCCCGCTGAGTTaGCCACACCAAAGCTGCTGTCATTTCTCACACTTGACTTTAAAG +
Preference number: 1 (lower is better)
Translates to: TQLTQGTHLRPLPLS*PHQSCCHFSHLTLK
Trigger: CTTTAAAGTCAAGTGTGAGAAATGACAGCAGCTTTGGTGTGGTCAACTCAGCGGGAGCGGGCGCAGGTGTGTTCCCTGTGTTAGCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR TCA 90 bp CAATTTGCAGCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTaGAAACACCTGTTCCCAACCTACTTCTTGGTGCAAGTTGACCAA +
Preference number: 1 (lower is better)
Translates to: QFAAHSVPLRGFTLT*KHLFPTYFLVQVDQ
Trigger: TTGGTCAACTTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGCTGCAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp ACTACTTGCTGGACACTGGTGGTTCTGACCTGTGACCAGCACCTCTaGTTCCTGTGTGCCCTCAAGAAAATACTAGTGTGGGTAACAGTC +
Preference number: 1 (lower is better)
Translates to: TTCWTLVVLTCDQHL*FLCALKKILVWVTV
Trigger: GACTGTTACCCACACTAGTATTTTCTTGAGGGCACACAGGAAGCAGAGGTGCTGGTCACAGGTCAGAACCACCAGTGTCCAGCAAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp AAATCAGGTAACGGCACACCCTGGGGAACACAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTCATCTTTGACTTATGCCGCCGGCCT +
Preference number: 1 (lower is better)
Translates to: KSGNGTPWGTQTQSV*FARTKLIFDLCRRP
Trigger: AGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTGTGTTCCCCAGGGTGTGCCGTTACCTGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 90 bp GGGTTGAGAGCTGGGTTGATCAAAGTTGGGATTTTGCTATTATTGTaGCAAAGGGTCCAGCCTTGCAGTCCAGATCCTGAAAGGCCTGGG +
Preference number: 1 (lower is better)
Translates to: GLRAGLIKVGILLLL*QRVQPCSPDPERPG
Trigger: CCCAGGCCTTTCAGGATCTGGACTGCAAGGCTGGACCCTTTGTCACAATAATAGCAAAATCCCAACTTTGATCAACCCAGCTCTCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp AGGCATGAGCCACCACATCCAGCAGAAAACATAAAATTCTGTGTGTaGCCCACGCTGTACTTCTACTGGCCAGCACTGGTACAGATCAAC +
Preference number: 1 (lower is better)
Translates to: RHEPPHPAENIKFCV*PTLYFYWPALVQIN
Trigger: GTTGATCTGTACCAGTGCTGGCCAGTAGAAGTACAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGTGGTGGCTCATGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CCA 90 bp AAGCCGAGATCCAGTGCAATACCTGGACTGTCACCGTCCTGTGAGTaGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTTGCTGTC +
Preference number: 1 (lower is better)
Translates to: KPRSSAIPGLSPSCE*CTQWEDNKPWCFAV
Trigger: GACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGCACTGGATCTCGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp TCTCTGTGGAGCTCTGACTGGTGTAGCTGGAAACAAACAGCAACTTaGAAACGGACGAAGAGCCTGCCGTGTGTTAATCATTTGCCTTAC +
Preference number: 1 (lower is better)
Translates to: SLWSSDWCSWKQTAT*KRTKSLPCVNHLPY
Trigger: GTAAGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp AGTGCAATACCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATaGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGTCTGTGTCAC +
Preference number: 1 (lower is better)
Translates to: SAIPGLSPSCEWCTQ*EDNKPWCFAVCLCH
Trigger: GTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGGTATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp AACACAGACTCAATCTGTGTGATTCGCAAGGACAAAACTCATCTTTaGCTTATGCCGCCGGCCTCACGTAAGGAAACAGTTCCCCACACA +
Preference number: 1 (lower is better)
Translates to: NTDSICVIRKDKTHL*LMPPASRKETVPHT
Trigger: TGTGTGGGGAACTGTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 90 bp ACCCACGGGAGATGTCAATCATCAGCTTCAACAAACATAAAAGAATaGTTCATGTACCAGTCAACAGCTGCTGCACGAACCCTCCCACTC +
Preference number: 1 (lower is better)
Translates to: THGRCQSSASTNIKE*FMYQSTAAARTLPL
Trigger: GAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAGCATTCTTTTATGTTTGTTGAAGCTGATGATTGACATCTCCCGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 90 bp ATGGGAAACGTGGATCAGTTCAACACATACAAGCCACACACTCTGTaGCCTGGAGCTGCCCTGGGGAAATCAAGTCACGTATATAAACAA +
Preference number: 1 (lower is better)
Translates to: MGNVDQFNTYKPHTL*PGAALGKSSHVYKQ
Trigger: TTGTTTATATACGTGACTTGATTTCCCCAGGGCAGCTCCAGGGCACAGAGTGTGTGGCTTGTATGTGTTGAACTGATCCACGTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 90 bp GTCTCTTGTGTATTGATGGCCGGACACACTCGTTTCCGCAGTGGCTaGTTTCCTGGAAGACGTTTCCTTTCTTCTGTATTAATGAAGCCT +
Preference number: 1 (lower is better)
Translates to: VSCVLMAGHTRFRSG*FPGRRFLSSVLMKP
Trigger: AGGCTTCATTAATACAGAAGAAAGGAAACGTCTTCCAGGAAAGCAGCCACTGCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GGGAACAATTCAGTGGCATTAAGTGCCTTTACAAGGTGGTGCAACTaGTTTGAGTCTCTGCTGGTGATGTCACTTTGGCAAAGGGACGAA +
Preference number: 1 (lower is better)
Translates to: GNNSVALSAFTRWCN*FESLLVMSLWQRDE
Trigger: TTCGTCCCTTTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGAATTGTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GTAGTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTaGTTTGAAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTC +
Preference number: 1 (lower is better)
Translates to: VVPGTCRYSYILLQL*FETAHSLVVYIVPV
Trigger: GACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp CCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTaGAACTGCGCATTCTCTAGTAGTATATATCGTGCCTGTCTTCAA +
Preference number: 1 (lower is better)
Translates to: PRHLSLFLYPPATVV*NCAFSSSIYRACLQ
Trigger: TTGAAGACAGGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp CAATTCAGTGGCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTaGGTCTCTGCTGGTGATGTCACTTTGGCAAAGGGACGAAATGAG +
Preference number: 1 (lower is better)
Translates to: QFSGIKCLYKVVQLL*VSAGDVTLAKGRNE
Trigger: CTCATTTCGTCCCTTTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GGTGTAGCTGGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTaGCGTGTGTTAATCATTTGCCTTACAAGATGTACCAGACGGTTT +
Preference number: 1 (lower is better)
Translates to: GVAGNKQQLANGRRA*RVLIICLTRCTRRF
Trigger: AAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CACAAGAGCAATGCAGGGATAAAACTATTGGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTGCA +
Preference number: 1 (lower is better)
Translates to: HKSNAGIKLLDKEGR*TSKKIRTQQEVASA
Trigger: TGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTGCTCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 90 bp TTTTACGGGAACAATTCAGTGGCATTAAGTGCCTTTACAAGGTGGTaGAACTGCTTTGAGTCTCTGCTGGTGATGTCACTTTGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: FYGNNSVALSAFTRW*NCFESLLVMSLWQR
Trigger: CCTTTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGAATTGTTCCCGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp AAGAGTCTCTTGTGTATTGATGGCCGGACACACTCGTTTCCGCAGTaGCTGCTTTCCTGGAAGACGTTTCCTTTCTTCTGTATTAATGAA +
Preference number: 1 (lower is better)
Translates to: KSLLCIDGRTHSFPQ*LLSWKTFPFFCINE
Trigger: TTCATTAATACAGAAGAAAGGAAACGTCTTCCAGGAAAGCAGCCACTGCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp CACACAATGATGCAGATACTCGTTTTCTTGAGCTTTATTGGCCCCTaGATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCA +
Preference number: 1 (lower is better)
Translates to: HTMMQILVFLSFIGP*MIQSLCLRTCPIRS
Trigger: TGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTGCATCATTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp CATGAGACACACAATGATGCAGATACTCGTTTTCTTGAGCTTTATTaGCCCCTGCATGATACAGTCCCTGTGCTTAAGAACATGCCCTAT +
Preference number: 1 (lower is better)
Translates to: HETHNDADTRFLELY*PLHDTVPVLKNMPY
Trigger: ATAGGGCATGTTCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTGCATCATTGTGTGTCTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GTGTGCCCTCAAGAAAATACTAGTGTGGGTAACAGTCCATCTGAGTaGAGTTTGAGACACACTACACATGAGACACACAATGATGCAGAT +
Preference number: 1 (lower is better)
Translates to: VCPQENTSVGNSPSE*SLRHTTHETHNDAD
Trigger: ATCTGCATCATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTTCTTGAGGGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 90 bp GATTTTTACGGGAACAATTCAGTGGCATTAAGTGCCTTTACAAGGTaGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTCACTTTGGCAA +
Preference number: 1 (lower is better)
Translates to: DFYGNNSVALSAFTR*CNCFESLLVMSLWQ
Trigger: TTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGAATTGTTCCCGTAAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 90 bp CTCAAGAAAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTaGGACACACTACACATGAGACACACAATGATGCAGATACTCGTT +
Preference number: 1 (lower is better)
Translates to: LKKILVWVTVHLSGV*DTLHMRHTMMQILV
Trigger: AACGAGTATCTGCATCATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTTCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp GGGACATCTAAAAATGTCTCCAGACTTTACCAAATGGGACAGCATTaGACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATAT +
Preference number: 1 (lower is better)
Translates to: GTSKNVSRLYQMGQH*THLRSTGREQIHKY
Trigger: ATATTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCATTTGGTAAAGTCTGGAGACATTTTTAGATGTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 90 bp AATGTTTATAAACTGACAGTGTTTTGCCAGAGGAAAGGTACAAAATaGTACATACAGAACCAAACCAGCCACTTCACAAGAGCAATGCAG +
Preference number: 1 (lower is better)
Translates to: NVYKLTVFCQRKGTK*YIQNQTSHFTRAMQ
Trigger: CTGCATTGCTCTTGTGAAGTGGCTGGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCCTCTGGCAAAACACTGTCAGTTTATAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 90 bp TGTGGGCTTTCCAGTAGTTTCCAGATTCAGATCCTTCATTCACATTaGTTTCTAGAATTCAGAACAAAGTCTCCTCTAATTCAACTCTGT +
Preference number: 1 (lower is better)
Translates to: CGLSSSFQIQILHSH*FLEFRTKSPLIQLC
Trigger: ACAGAGTTGAATTAGAGGAGACTTTGTTCTGAATTCTAGAAATCAATGTGAATGAAGGATCTGAATCTGGAAACTACTGGAAAGCCCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR TCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCT +
Preference number: 2 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLSSPGR*PGHSAA
Trigger: AGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCT...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAGTGGCCCTGGGACCTTaGGGGTGGCAGCATGAGGTG +
Preference number: 2 (lower is better)
Translates to: WQCMGSCAPISASVSQGTVALGP*GWQHEV
Trigger: CACCTCATGCTGCCACCCCCAAGGTCCCAGGGCCAC...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAGCTCAGGGCTGGCACTaGGAGGCTACTGGTGACAGT +
Preference number: 2 (lower is better)
Translates to: WQCMGSCAPISASVSQGTAQGWH*EATGDS
Trigger: ACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGC...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCTCAAAGGCTGGGCCTaGCTACAGACCAGCAGCAGT +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLLKGWA*LQTSSS
Trigger: ACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCT +
Preference number: 2 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQSSPGR*PGHSAA
Trigger: AGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCT...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGACTGCATCATCTCGGTaGGCAAGTGCGCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLTASSR*ASAQAV
Trigger: GACTGCTTGCGCACTTGCTCACCGAGATGATGCAGT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCATCTCGGTGAGCAAGTaGGCAAGCAGTCCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLISVSK*ASSPGR
Trigger: GCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGAT...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CAA 90 bp GCCTCCAAACGCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGGCTaGGTTCCCATGGATACTCCTACAACAAGTTGGGAGGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: ASKRLHLCQMAVRRG*VPMDTPTTSWEGAG
Trigger: CCCTGCCCCCTCCCAACTTGTTGTAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGTCAACAGCTGCTaGACGAACCCTCCCACTCCA +
Preference number: 2 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLPVNSC*TNPPTP
Trigger: TGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCTCATCTTTGACTTATaGCGCCGGCCTCACGTAAGG +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLLIFDL*RRPHVR
Trigger: CCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGATGCAGGCCTGGAAGTaGCGACACAAAAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLMQAWK*RHKSQL
Trigger: AAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCAT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCACTCGTTTCCGCAGTaGCTGCTTTCCTGGAAGACG +
Preference number: 2 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPHSFPQ*LLSWKT
Trigger: CGTCTTCCAGGAAAGCAGCCACTGCGGAAACGAGTG...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp AGAGCGGCTTCCCAGCACACATCCACTGCCTCCAAACGCCTGCACTaGTGCCAGATGGCAGTCAGGAGGGGCTTGGTTCCCATGGATACT +
Preference number: 2 (lower is better)
Translates to: RAASQHTSTASKRLH*CQMAVRRGLVPMDT
Trigger: AGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGGAAGCCGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CAA 90 bp GCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTaGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCCTGCCCCCTA +
Preference number: 2 (lower is better)
Translates to: AKGRNEPPVRQACSE*FGGSMDTGACPCPL
Trigger: TAGGGGGCAGGGACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGGTGCCCTGTCCTCTaGAGAGTCACATTTCAAGGA +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLRCPVL*RVTFQG
Trigger: TCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACACCTCCACCCTGCCCCTaGAAAACAGTACACACACAT +
Preference number: 2 (lower is better)
Translates to: WQCMGSCAPISASVSQGTPPPCP*KTVHTH
Trigger: ATGTGTGTGTACTGTTTTTCAGGGGCAGGGTGGAGG...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCCCTTGCTCTTCTGCTaGAGTGGCAGATTACCAACC +
Preference number: 2 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPPLLFC*SGRLPT
Trigger: GGTTGGTAATCTGCCACTTCAGCAGAAGAGCAAGGG...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCGAAGCTAAGCCCCAGTaGGACTGCCTACATGGTGTA +
Preference number: 2 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPEAKPQ*DCLHGV
Trigger: TACACCATGTAGGCAGTCTCACTGGGGCTTAGCTTC...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGTCAGCAACCTCCAACTaGATCATCTCGGTGAGCAAG +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLSATSN*IISVSK
Trigger: CTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGA...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CAA 90 bp CCTTGCAGTCCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTaGGGGAGTCCGTCCTGCATTGTGCAGGATGTTCAGCGGCATCCC +
Preference number: 2 (lower is better)
Translates to: PCSPDPERPGTRPGN*GSPSCIVQDVQRHP
Trigger: GGGATGCCGCTGAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTTGTCCCAGGCCTTTCAGGATCTGGACTGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGCAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTC +
Preference number: 2 (lower is better)
Translates to: NAGATSHPVHGPRLPEAEQTQSV*FARTKL
Trigger: GAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTG...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCAACAGACACACTGGCTaGCTGCCTAGCAAGCATAGG +
Preference number: 2 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSNRHTG*LPSKHR
Trigger: CCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTGTACCAGTCAACAGCTaGTGCACGAACCCTCCCACT +
Preference number: 2 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAVPVNS*CTNPPT
Trigger: AGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTAC...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGTCCCCCGACAGGAAATaGTGCCAGTCAACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLSPDRK*CQSTLK
Trigger: TTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGA...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTC +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLQTQSV*FARTKL
Trigger: GAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCTCATCTTTGACTTATaGCGCCGGCCTCACGTAAGG +
Preference number: 2 (lower is better)
Translates to: GTERLLVTVNPSQRLGLALIFDL*RRPHVR
Trigger: CCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCCCGACAGGAAATGCTaGCAGTCAACTCTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLPDRKC*QSTLKE
Trigger: TTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTAGTACCTCCCCAGGCTaGAGGCTCTGGGCAGCTGAG +
Preference number: 2 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVSTSPG*RLWAAE
Trigger: CTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTGCAAGAAGTGGCCAGTaGACCCCAAACCACACTGGT +
Preference number: 2 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLARSGQ*TPNHTG
Trigger: ACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGC...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTAGCGGGCAGTGTCACTaGAGCAAGGTACTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLSGQCH*SKVLPA
Trigger: AGCTGGAAGTACCTTGCTGCAGTGACACTGCCCGCT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCTCTTAATGCAGGCCTaGAAGTGGCGACACAAAAGC +
Preference number: 2 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLLLMQA*KWRHKS
Trigger: GCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGGAACACGGTTTCCAGTaGCTTTGGCCCCTACTCGGG +
Preference number: 2 (lower is better)
Translates to: GYSLTIPSESENIQKDYVEHGFQ*LWPLLG
Trigger: CCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTC...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp TGCCTCGCGACCCCACGTGTTGAGTCACAAAGAGTCTCTTGTGTATaGATGGCCGGACACACTCGTTTCCGCAGTGGCTGCTTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: CLATPRVESQRVSCV*MAGHTRFRSGCFPG
Trigger: TCCAGGAAAGCAGCCACTGCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGACTCTTTGTGACTCAACACGTGGGGTCGCGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTTTAGGTGGGAAAGATaGTATGCAGAATCCACTACA +
Preference number: 2 (lower is better)
Translates to: NAGATSHPVHGPRLPEAEFRWER*YAESTT
Trigger: TGTAGTGGATTCTGCATATCATCTTTCCCACCTAAA...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGACTGCATCATCTCGGTaGGCAAGTGCGCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMTASSR*ASAQAV
Trigger: GACTGCTTGCGCACTTGCTCACCGAGATGATGCAGT...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTAGACCAGCAGATAGCTaGGCTACATCCCCAAGCTCA +
Preference number: 2 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLRPADS*ATSPSS
Trigger: TGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAGACATTATCATCCACTaGAGGACAACTTCTGCCCTA +
Preference number: 2 (lower is better)
Translates to: WQCMGSCAPISASVSQGTDIIIH*RTTSAL
Trigger: TAGGGCAGAAGTTGTCCTTCAGTGGATGATAATGTC...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCAACGGACGAAGAGCCTaGCGTGTGTTAATCATTTGC +
Preference number: 2 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSNGRRA*RVLIIC
Trigger: GCAAATGATTAACACACGGCAGGCTCTTCGTCCGTT...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCAGTGCCACCAGCTCTaGCTCGCGACCCCACGTGTT +
Preference number: 2 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHQCHQL*LATPRV
Trigger: AACACGTGGGGTCGCGAGGCAGAGCTGGTGGCACTG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGCACCCCAAACCACACTaGTGTCCACCTCATTGGCAG +
Preference number: 2 (lower is better)
Translates to: GYSLTIPSESENIQKDYVHPKPH*CPPHWQ
Trigger: CTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTG...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTTCGATGGTGATGGGGTaGCTGCCATTCCCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLSMVMG*LPFPWF
Trigger: AAACCAAGGGAATGGCAGCCACCCCATCACCATCGA...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTGCTCTTCTGCTGAAGTaGCAGATTACCAACCAGGCG +
Preference number: 2 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLALLLK*QITNQA
Trigger: CGCCTGGTTGGTAATCTGCCACTTCAGCAGAAGAGC...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCAGACAAAACTCATCTTTaGCTTATGCCGCCGGCCTCA +
Preference number: 2 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAADKTHL*LMPPAS
Trigger: TGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTC...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCTAAACAACATCACCTaGAAAAGGAACCTAGAGGAG +
Preference number: 2 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPLNNIT*KRNLEE
Trigger: CTCCTCTAGGTTCCTTTTTCAGGTGATGTTGTTTAG...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCATCTCGGTGAGCAAGTaGGCAAGCAGTCCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: NSPGENVHRGELSNSIKPISVSK*ASSPGR
Trigger: GCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGAT...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGTTGGGGAGTCCGTCCTaGATTGTGCAGGATGTTCAG +
Preference number: 2 (lower is better)
Translates to: GYSLTIPSESENIQKDYVLGSPS*IVQDVQ
Trigger: CTGAACATCCTGCACAATGCAGGACGGACTCCCCAA...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCACTCTTAATGCAGGCCTaGAAGTGGCGACACAAAAGC +
Preference number: 2 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAALLMQA*KWRHKS
Trigger: GCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAG...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAAACAGTCCATCTGAGTaGAGTTTGAGACACACTACA +
Preference number: 2 (lower is better)
Translates to: WQCMGSCAPISASVSQGTNSPSE*SLRHTT
Trigger: TGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGGACAAAACTCATCTTTaGCTTATGCCGCCGGCCTCA +
Preference number: 2 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMDKTHL*LMPPAS
Trigger: TGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTC...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTCAGCAACCTCCAACTaGATCATCTCGGTGAGCAAG +
Preference number: 2 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPSATSN*IISVSK
Trigger: CTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGA...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGGACACACTGGCTGCCTaGCTAGCAAGCATAGGCCCC +
Preference number: 2 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMDTLAA*LASIGP
Trigger: GGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTC...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCGTAAATCAGAAAAGCTaGTGTCCGCCCTGGCTCACT +
Preference number: 2 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCVNQKS*CPPWLT
Trigger: AGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTAC...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTGTAAATCAGAAAAGCTaGTGTCCGCCCTGGCTCACT +
Preference number: 2 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPVNQKS*CPPWLT
Trigger: AGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTAC...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCATCCCCCGACAGGAAATaGTGCCAGTCAACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAASPDRK*CQSTLK
Trigger: TTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGA...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCAACCTACTTCTTGGTaGAAGTTGACCAAATCGTTT +
Preference number: 2 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPQPTSW*KLTKSF
Trigger: AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTG...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTCTGGCGTTCCCGTGTTaGAGGTGGATGGAAGTGATC +
Preference number: 2 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVLAFPC*RWMEVI
Trigger: GATCACTTCCATCCACCTGCAACACGGGAACGCCAG...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGCAGGCAAACACTGGCTaGCATGGTCCCTTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMQANTG*HGPFQA
Trigger: GGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTG...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp CACACAGCTAACACAGGGAACACACCTGCGCCCGCTCCCGCTGAGTaGACCACACCAAAGCTGCTGTCATTTCTCACACTTGACTTTAAA +
Preference number: 2 (lower is better)
Translates to: HTANTGNTPAPAPAE*TTPKLLSFLTLDFK
Trigger: TTTAAAGTCAAGTGTGAGAAATGACAGCAGCTTTGGTGTGGTCAACTCAGCGGGAGCGGGCGCAGGTGTGTTCCCTGTGTTAGCTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CAA 90 bp GTGCCCGCTGTGCTTCTCACAGGCCTCCTTGCCTTTCAGAATCAGTaGTCTGGAAACCTGCTGAGGAAATTCAAAAACAGCAACGGGTGG +
Preference number: 2 (lower is better)
Translates to: VPAVLLTGLLAFQNQ*SGNLLRKFKNSNGW
Trigger: CCACCCGTTGCTGTTTTTGAATTTCCTCAGCAGGTTTCCAGACAACTGATTCTGAAAGGCAAGGAGGCCTGTGAGAAGCACAGCGGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCATCTCGGTGAGCAAGTaGGCAAGCAGTCCAGGGCGC +
Preference number: 2 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCISVSK*ASSPGR
Trigger: GCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGAT...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 2 (lower is better)
Translates to: KTQELPATQSTALVSQRLNRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAAGGTGCCCTGTCCTCTaGAGAGTCACATTTCAAGGA +
Preference number: 2 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTRCPVL*RVTFQG
Trigger: TCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCT...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACACTGTCACCGTCCTGTaGGTGGTGTACACAATGGGA +
Preference number: 2 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHTVTVL*VVYTMG
Trigger: TCCCATTGTGTACACCACTCACAGGACGGTGACAGT...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCCCAGTCAACAGCTGCTaGACGAACCCTCCCACTCCA +
Preference number: 2 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCPVNSC*TNPPTP
Trigger: TGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGG...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTAGCTTTATTGGCCCCTaGATGATACAGTCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVSFIGP*MIQSLC
Trigger: GCACAGGGACTGTATCATGCAGGGGCCAATAAAGCT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GCCACCACATCCAGCAGAAAACATAAAATTCTGTGTGTGGCCCACGCTGTACTTAAACGCCTGCACTTGTaGCAGATGGCAGTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: ATTSSRKHKILCVAHAVLKRLHL*QMAVRR
Trigger: CCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTT...AAGTACAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGTGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR GCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTGTGACCAGCACCTCTaGTTCCTGTGTGCCCTCAAG +
Preference number: 2 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMCDQHL*FLCALK
Trigger: CTTGAGGGCACACAGGAAGCAGAGGTGCTGGTCACA...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGGGTTTCCAGTGGCTTTaGCCCCTACTCGGGAAACGT +
Preference number: 2 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMGFQWL*PLLGKR
Trigger: ACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACC...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACGTGAGACTGCCTACATaGTGTAATGGCAGGGACTGC +
Preference number: 2 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHVRLPT*CNGRDC
Trigger: GCAGTCCCTGCCATTACACCATGTAGGCAGTCTCAC...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp ATCCGCTGGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATaGTCATTACGAGAGTGCCAAATGACATCTTCCCTCCACCCTGCC +
Preference number: 2 (lower is better)
Translates to: IRWGRCSLASASIKT*SLRECQMTSSLHPA
Trigger: GGCAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp ATTTTCACCTATTGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGCCTGTTCTCGATGGTaGTGGGGTGGCTGCCATTCC +
Preference number: 2 (lower is better)
Translates to: IFTYWLLHFTKWTSRCLFACSRW*WGGCHS
Trigger: GGAATGGCAGCCACCCCATCACCATCGAGAACAGGC...AAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGCTTCTTGGTGCAAGTTaGCCAAATCGTTTTAAGTGG +
Preference number: 2 (lower is better)
Translates to: GYSLTIPSESENIQKDYVLLGAS*PNRFKW
Trigger: CCACTTAAAACGATTTGGTCAACTTGCACCAAGAAG...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGGAACTCCAGTATGAGTaGCAGAGCCAGACCCTGTCT +
Preference number: 2 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMELQYE*QSQTLS
Trigger: AGACAGGGTCTGGCTCTGTCACTCATACTGGAGTTC...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGCTGCAATTCATATTTTaGATAGAGATCCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: GYSLTIPSESENIQKDYVLQFIF*IEILGL
Trigger: GAGGCCCAGGATCTCTATTCAAAATATGAATTGCAG...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTGATTTGTCTGGCGACTaGAGAGACTCCCCGTTCATA +
Preference number: 2 (lower is better)
Translates to: VPGTCRYSYILLQLWFETDLSGD*RDSPFI
Trigger: TATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATC...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ACATCCAGCAGAAAACATAAAATTCTGTGTGTGGCCCACGCTGTACTTCTACTGAAGTCCCAGCCCAAGTaGAGGTCTCTCCTTCCCCAG +
Preference number: 2 (lower is better)
Translates to: TSSRKHKILCVAHAVLLLKSQPK*RSLLPQ
Trigger: CTGGGGAAGGAGAGACCTGCACTTGGGCTGGGACTT...CAGTAGAAGTACAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR CCA 90 bp AAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTTGGGAGGTGTCAGCCTaGACACCTGAAGATGAACTG +
Preference number: 2 (lower is better)
Translates to: KGTSRVQNFFMYCQVGRSWEVSA*TPEDEL
Trigger: CAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCA...ACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
3UTR-3UTR GCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGGTAAATCAGAAAAGCTaGTGTCCGCCCTGGCTCACT +
Preference number: 2 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMVNQKS*CPPWLT
Trigger: AGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTAC...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp AAAGCAGAGAGCAAAATGCCCAACAAGACAGTAACAATCCTACCCGTTTCTGGTCCAGCACACATCCACTaGCTCCAAACGCCTGCACTT +
Preference number: 2 (lower is better)
Translates to: KAESKMPNKTVTILPVSGPAHIH*LQTPAL
Trigger: AAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGG...ACCAGAAACGGGTAGGATTGTTACTGTCTTGTTGGGCATTTTGCTCTCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR GCA 90 bp ATTTTCACCTATTGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTCCGCACCATAGCACCTaGCCACCTGAGAACCAGGAA +
Preference number: 2 (lower is better)
Translates to: IFTYWLLHFTKWTSRCLFPHHST*PPENQE
Trigger: TTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGG...AAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATGCTGGCTGTTCCCTTaGTCTTCTGCTGAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKCWLFP*SSAEVA
Trigger: TGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCCTGGGGACTTCTCCCTaGAGTCTTCCAAAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCLGTSP*SLPKCL
Trigger: GAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAG...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR TCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGTTTAGGTGGGAAAGATaGTATGCAGAATCCACTACA +
Preference number: 2 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTFRWER*YAESTT
Trigger: TGTAGTGGATTCTGCATATCATCTTTCCCACCTAAA...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCCCGACAGGAAATGCTaGCAGTCAACTCTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHPDRKC*QSTLKE
Trigger: TTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp CATGAGCCACCACATCCAGCAGAAAACATAAAATTCTGTGTGTGGCCCACGCTGGGCAAAAGCTACAAATaGACTAAGTCCTGTGGGCTT +
Preference number: 2 (lower is better)
Translates to: HEPPHPAENIKFCVWPTLGKSYK*TKSCGL
Trigger: AAGCCCACAGGACTTAGTGCATTTGTAGCTTTTGCC...CAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGTGGTGGCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CAA 90 bp ACAGCAACTTGCAAACGGACGAAGAGCCTGCCGTGTGTTAATCATTaGCCTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGG +
Preference number: 2 (lower is better)
Translates to: TATCKRTKSLPCVNH*PYKMYQTVSSTNKG
Trigger: CCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp CATGAGCCACCACATCCAGCAGAAAACATAAAATTCTGTGTGTGGCCCACGCTGCAATTGCCTCAAAATTaGAGGCAGCCAAGTAGATCA +
Preference number: 2 (lower is better)
Translates to: HEPPHPAENIKFCVWPTLQLPQN*RQPSRS
Trigger: TGATCTACTTGGCTGCCTTCAATTTTGAGGCAATTG...CAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGTGGTGGCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCTCCCCCGACAGGAAATaGTGCCAGTCAACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCSPDRK*CQSTLK
Trigger: TTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGA...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGA +
Preference number: 2 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVDKEGR*TSKKIR
Trigger: TCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATC...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 2 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCNRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACTTTCTTGAGCTTTATTaGCCCCTGCATGATACAGTC +
Preference number: 2 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHFLELY*PLHDTV
Trigger: GACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAA...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATCACCGTCCTGTGAGTaGTGTACACAATGGGAAGAT +
Preference number: 2 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKSPSCE*CTQWED
Trigger: ATCTTCCCATTGTGTACACCACTCACAGGACGGTGA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp GTTTTGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATaGATCAGCACCATTTGTGGTATGTTCCGTGATGAGCGTTTAGTG +
Preference number: 2 (lower is better)
Translates to: VLLSVCVTSMKTRVS*ISTICGMFRDERLV
Trigger: CACTAAACGCTCATCACGGAACATACCACAAATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp AGAAATGCAACAGTCAGGCCTAAGACTGTTCCTGCAATTCATATTTaGAATAGAGATCCTGGGCCTCTGCAAATTGCATCCCCAAGCCGA +
Preference number: 2 (lower is better)
Translates to: RNATVRPKTVPAIHI*NRDPGPLQIASPSR
Trigger: TCGGCTTGGGGATGCAATTTGCAGAGGCCCAGGATCTCTATTCAAAATATGAATTGCAGGAACAGTCTTAGGCCTGACTGTTGCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR TCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAACAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTC +
Preference number: 2 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKQTQSV*FARTKL
Trigger: GAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTG...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp CTGGCCAGCACTGGTACAGATCAACTTGCCTTAACAACTAAAAGAAGAGGAACATTATGTACTGTCAGGTaGGACGCAGTCTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LASTGTDQLALTTKRRGTLCTVR*DAVSGK
Trigger: CTTTCCTGAGACTGCGTCCCACCTGACAGTACATAA...TGTTCCTCTTCTTTTAGTTGTTAAGGCAAGTTGATCTGTACCAGTGCTGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CAA 90 bp GAACCAAACCAGCCACTTCACAAGAGCAATGCAGGGATAAAACTATaGGATAAGGAAGGCAGATGCACTTCCAAGAAAATCAGAACCCAG +
Preference number: 2 (lower is better)
Translates to: EPNQPLHKSNAGIKL*DKEGRCTSKKIRTQ
Trigger: CTGGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGTGGCTGGTTTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CAA 90 bp GACACACTACACATGAGACACACAATGATGCAGATACTCGTTTTCTaGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGA +
Preference number: 2 (lower is better)
Translates to: DTLHMRHTMMQILVF*SFIGPCMIQSLCLR
Trigger: TCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTGCATCATTGTGTGTCTCATGTGTAGTGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 90 bp CCTCAAGAAAATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTaGAGACACACTACACATGAGACACACAATGATGCAGATACTCGT +
Preference number: 2 (lower is better)
Translates to: PQENTSVGNSPSEWS*RHTTHETHNDADTR
Trigger: ACGAGTATCTGCATCATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTTCTTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGA +
Preference number: 2 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKDKEGR*TSKKIR
Trigger: TCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATC...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAAATGATACAGTCCCTGTaGTTAAGAACATGCCCTATT +
Preference number: 2 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKMIQSL*LRTCPI
Trigger: AATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATTTTCACCTATTGGCTaGTGCATTTTACGAAGTGGA +
Preference number: 2 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKFSPIG*CILRSG
Trigger: TCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 2 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHNRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCACTTCACAAGAGCAATaGAGGGATAAAACTATTGGA +
Preference number: 2 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCTSQEQ*RDKTIG
Trigger: TCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGT...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR GCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTACTTCACAAGAGCAATaGAGGGATAAAACTATTGGA +
Preference number: 2 (lower is better)
Translates to: LSVCVTSMKTRVSLISTITSQEQ*RDKTIG
Trigger: TCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGT...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp TATCAAAGGAGGGAGGGATCGTCCTTCAATTGCCTCAAAATTGAAGGCAGCCAAATAGTTACACACATCTaGCTAAGAACGATCATTCTC +
Preference number: 2 (lower is better)
Translates to: YQRREGSSFNCLKIEGSQIVTHI*LRTIIL
Trigger: GAGAATGATCGTTCTTAGCCAGATGTGTGTAACTAT...TTGGCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCCCTCCCTCCTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR CCA 90 bp AAAGCAGAGAGCAAAATGCCCAACAAGACAGTAACAATCCTACCCGTTTCTGGTAGAACGATCATTCTCTaGCCAATAATTAAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: KAESKMPNKTVTILPVSGRTIIL*PIIKLH
Trigger: ATGCAGCTTAATTATTGGCCAGAGAATGATCGTTCT...ACCAGAAACGGGTAGGATTGTTACTGTCTTGTTGGGCATTTTGCTCTCTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR TCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTTTTAGGTGGGAAAGATaGTATGCAGAATCCACTACA +
Preference number: 2 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPFRWER*YAESTT
Trigger: TGTAGTGGATTCTGCATATCATCTTTCCCACCTAAA...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 2 (lower is better)
Translates to: FAFVEVQIGVFCKRGALINRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CCA 72 bp GTCCCTTCCAGGCCCACGCCCGAGGAGGGAGCTGCCTaGGCTCCCAAGTCCCTGTCTGATGCGGGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: VPSRPTPEEGAA*APKSLSDAGQQ
Trigger: CTGCTGCCCCGCATCAGACAGGGACTTGGGAGCCCAGGCAGCTCCCTCCTCGGGCGTGGGCCTGGAAGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CGAGGAGGGAGCTGCCTGGGCTCCCAAGTCCCTGTCTaGTGCGGGGCAGCAGCCAGGCCCAGCAGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: RGGSCLGSQVPV*CGAAARPSSRS
Trigger: GCTTCTGCTGCTGGGCCTGGCTGCTGCCCCGCATCAGACAGGGACTTGGGAGCCCAGGCAGCTCCCTCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TGCCACCCGGGCCATCACGTACAGGCAAACACTGGCTaGCATGGTCCCTTCCAGGCCCACGCCCGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: CHPGHHVQANTG*HGPFQAHARGG
Trigger: CCCTCCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp ATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCTCCAGGCCTGGGGACT +
Preference number: 3 (lower is better)
Translates to: ISVSKCASSPGR*PGHSAAPGLGT
Trigger: AGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CCA 72 bp GACTTGCCACCCGGGCCATCACGTACAGGCAAACACTaGCTGCCATGGTCCCTTCCAGGCCCACGCCCGAGG +
Preference number: 3 (lower is better)
Translates to: DLPPGPSRTGKH*LPWSLPGPRPR
Trigger: CCTCGGGCGTGGGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp ATCCTTCAGTCACGGACATGCCCCAGCCCAGGGCCCTaGTGCAGGGAGAGCTGCTCTCTGTGCCCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: ILQSRTCPSPGP*CRESCSLCPPG
Trigger: CCCAGGAGGGCACAGAGAGCAGCTCTCCCTGCACCAGGGCCCTGGGCTGGGGCATGTCCGTGACTGAAGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp AGGGGGCCGCCCTCCTCTGGAATGACTCAGGCCTCTTaGGCTCCAGGTGTCACGGGGATGACAGGGATGCTG +
Preference number: 3 (lower is better)
Translates to: RGPPSSGMTQAS*APGVTGMTGML
Trigger: CAGCATCCCTGTCATCCCCGTGACACCTGGAGCCCAAGAGGCCTGAGTCATTCCAGAGGAGGGCGGCCCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CAGGGCGCTGACCTGGGCACTCGGCAGCTCCAGGCCTaGGGACTTCTCCCTGGAGTCTTCCAAAGTGTCTCA +
Preference number: 3 (lower is better)
Translates to: QGADLGTRQLQA*GLLPGVFQSVS
Trigger: TGAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAGGCCTGGAGCTGCCGAGTGCCCAGGTCAGCGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACACTGGTGTCCACCTCATaGGCAGCAGCCAGCCAGGAC +
Preference number: 3 (lower is better)
Translates to: WQCMGSCAPISASVSQGTLVSTS*AAASQD
Trigger: GTCCTGGCTGGCTGCTGCCAATGAGGTGGACACCAG...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp ACTAACTGGCGTTCCCGTGTTGCAGGTGGATGGAAGTaGTCCGCAGTGCCACCAGCTCTGCCTCGCGACCCC +
Preference number: 3 (lower is better)
Translates to: TNWRSRVAGGWK*SAVPPALPRDP
Trigger: GGGGTCGCGAGGCAGAGCTGGTGGCACTGCGGATCACTTCCATCCACCTGCAACACGGGAACGCCAGTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp GTTCCCGTGTTGCAGGTGGATGGAAGTGATCCGCAGTaGCACCAGCTCTGCCTCGCGACCCCACGTGTTGAG +
Preference number: 3 (lower is better)
Translates to: VPVLQVDGSDPQ*HQLCLATPRVE
Trigger: CTCAACACGTGGGGTCGCGAGGCAGAGCTGGTGGCACTGCGGATCACTTCCATCCACCTGCAACACGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp GGATCTTTCCCTCCTTCAGCTTCCGCCTGCTGGCAATaGATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTG +
Preference number: 3 (lower is better)
Translates to: GSFPPSASACWQ*MGSCAPISASV
Trigger: CACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CCGTCCTGCATTGTGCAGGATGTTCAGCGGCATCCCTaGCCACCCACTAGATGCCCGCAGCAACCCCTCAGT +
Preference number: 3 (lower is better)
Translates to: PSCIVQDVQRHP*PPTRCPQQPLS
Trigger: ACTGAGGGGTTGCTGCGGGCATCTAGTGGGTGGCCAGGGATGCCGCTGAACATCCTGCACAATGCAGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAACAGACCAGCAGCAGTaGACGCTGAGGCAGGTTCCA +
Preference number: 3 (lower is better)
Translates to: WQCMGSCAPISASVSQGTTDQQQ*TLRQVP
Trigger: TGGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp AACCCCATTCTTTCCAGCGCCCCGCACCATAGCACCTaGCCACCTGAGAACCAGGAACGCACCCTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: NPILSSAPHHST*PPENQERTLSV
Trigger: CACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGGGGCGCTGGAAAGAATGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp GCAAATTGCATCCCCAAGCCGACTACTTGTGCAGTTTaGCCTGCTGAGCCCTCCTCGCCCCGGGAGGCAGAA +
Preference number: 3 (lower is better)
Translates to: ANCIPKPTTCAV*PAEPSSPREAE
Trigger: TTCTGCCTCCCGGGGCGAGGAGGGCTCAGCAGGGCAAACTGCACAAGTAGTCGGCTTGGGGATGCAATTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTaGGGGTGTGGAGGACAGCCCAGTGACAAATCACCC +
Preference number: 3 (lower is better)
Translates to: DELSRQQHAWSS*GCGGQPSDKSP
Trigger: GGGTGATTTGTCACTGGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
3UTR CCA 72 bp ACTTCCAGCTCCACACTGAGTGAGTGCCCAGGCCAGTaGGTCTCCACTGTACCTCAGGAACGCCTGGGTGCT +
Preference number: 3 (lower is better)
Translates to: TSSSTLSECPGQ*VSTVPQERLGA
Trigger: AGCACCCAGGCGTTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CCCACTGCCCGACACCAGCAGGCGATTCTGTTCTCATaGCAGAAAGTGGGGTCCCAACTTCCCTGCGCCCTT +
Preference number: 3 (lower is better)
Translates to: PTARHQQAILFS*QKVGSQLPCAL
Trigger: AAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp TGGGATGGATCTTTCCCTCCTTCAGCTTCCGCCTGCTaGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCC +
Preference number: 3 (lower is better)
Translates to: WDGSFPPSASAC*QCMGSCAPISA
Trigger: GGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CGCACAGATCAGCAACCTCCAACTGCATCATCTCGGTaGGCAAGTGCGCAAGCAGTCCAGGGCGCTGACCTG +
Preference number: 3 (lower is better)
Translates to: RTDQQPPTASSR*ASAQAVQGADL
Trigger: CAGGTCAGCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 72 bp TCCCATCTCCTGGGAGGCCAAGGCTGGAGGATCGATTaGGCCCAGGAGGTAGCTACAGTGGGCGATAACTGC +
Preference number: 3 (lower is better)
Translates to: SHLLGGQGWRID*AQEVATVGDNC
Trigger: GCAGTTATCGCCCACTGTAGCTACCTCCTGGGCTCAATCGATCCTCCAGCCTTGGCCTCCCAGGAGATGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CAGGTCACACAGAGCGGCTTCCCAGCACACATCCACTaGCTCCAAACGCCTGCACTTGTGCCAGATGGCAGT +
Preference number: 3 (lower is better)
Translates to: QVTQSGFPAHIH*LQTPALVPDGS
Trigger: ACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGGAAGCCGCTCTGTGTGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 72 bp CCAGTGGGTCTCCACTGTACCTCAGGAACGCCTGGGTaGTGGCTGTTCCCTTGCTCTTCTGCTGAAGTGGCA +
Preference number: 3 (lower is better)
Translates to: PVGLHCTSGTPG*WLFPCSSAEVA
Trigger: TGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTACAGTGGAGACCCACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CCTGGGACAAGGCCAGGTAATTTGGGGAGTCCGTCCTaGATTGTGCAGGATGTTCAGCGGCATCCCTGGCCA +
Preference number: 3 (lower is better)
Translates to: PGTRPGNLGSPS*IVQDVQRHPWP
Trigger: TGGCCAGGGATGCCGCTGAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTTGTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp GGTTGGCTTTATCTACAGCTCAGTCCTGGCGGGACTTaGCACCCGGGCCATCACGTACAGGCAAACACTGGC +
Preference number: 3 (lower is better)
Translates to: GWLYLQLSPGGT*HPGHHVQANTG
Trigger: GCCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGACTGAGCTGTAGATAAAGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTaGGGTCCCAACTTCCCTGCGCCCTTACCCTGCACG +
Preference number: 3 (lower is better)
Translates to: DTSRRFCSHGRK*GPNFPAPLPCT
Trigger: CGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACACAGCATTGCACCCATTaGAGAAGCACCGGTAGAGAG +
Preference number: 3 (lower is better)
Translates to: WQCMGSCAPISASVSQGTQHCTH*RSTGRE
Trigger: CTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTG...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTGGGGCTGAGTATGATTaGTCTGGCGACTGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAGAEYD*SGDCRD
Trigger: GTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCC...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp CATGATCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCTGGACACCTGAAGTACTCCTACAACAAGTaGGGAGGGGGCAGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: HDHRVSASFGRCQPGHLKYSYNK*GGGREG
Trigger: GCCCTCCCTGCCCCCTCCCAACTTGTTGTAGGAGTA...CTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTCTGTGATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR TCA 72 bp GCAGTGCCACCAGCTCTGCCTCGCGACCCCACGTGTTaGGTCACAAAGAGTCTCTTGTGTATTGATGGCCGG +
Preference number: 3 (lower is better)
Translates to: AVPPALPRDPTC*VTKSLLCIDGR
Trigger: CCGGCCATCAATACACAAGAGACTCTTTGTGACTCAACACGTGGGGTCGCGAGGCAGAGCTGGTGGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp GTCACTGCAGCAAGGTACTTCCAGCTCCACACTGAGTaGGTGCCCAGGCCAGTGGGTCTCCACTGTACCTCA +
Preference number: 3 (lower is better)
Translates to: VTAARYFQLHTE*VPRPVGLHCTS
Trigger: TGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTGCAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CAGTGTCACTGCAGCAAGGTACTTCCAGCTCCACACTaGGTGAGTGCCCAGGCCAGTGGGTCTCCACTGTAC +
Preference number: 3 (lower is better)
Translates to: QCHCSKVLPAPH*VSAQASGSPLY
Trigger: GTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTGCAGTGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CAAGTACCAAACTCATCAACTAAGTCCCAGCCCAAGTaGAGGTCTCTCCTTCCCCAGCCCAGAGGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: QVPNSSTKSQPK*RSLLPQPRGAL
Trigger: CAGGGCCCCTCTGGGCTGGGGAAGGAGAGACCTGCACTTGGGCTGGGACTTAGTTGATGAGTTTGGTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 72 bp GTTTCCAGTGGCTTTGGCCCCTACTCGGGAAACGTCTaGCTGTTCTCGATGGTGATGGGGTGGCTGCCATTC +
Preference number: 3 (lower is better)
Translates to: VSSGFGPYSGNV*LFSMVMGWLPF
Trigger: GAATGGCAGCCACCCCATCACCATCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CTGCAGCAAGGTACTTCCAGCTCCACACTGAGTGAGTaGCCAGGCCAGTGGGTCTCCACTGTACCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: LQQGTSSSTLSE*PGQWVSTVPQE
Trigger: TTCCTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAGTACCTTGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp AGAAAGTGGGGTCCCAACTTCCCTGCGCCCTTACCCTaGACGGTGTTGGCTGAGGCCCTAGACATCTTGCTT +
Preference number: 3 (lower is better)
Translates to: RKWGPNFPAPLP*TVLAEALDILL
Trigger: AAGCAAGATGTCTAGGGCCTCAGCCAACACCGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCCCACTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TCCCTGCCAACTAAGCGTTTAGACCTGGGGTCCCACTaGCCGACACCAGCAGGCGATTCTGTTCTCATGGCA +
Preference number: 3 (lower is better)
Translates to: SLPTKRLDLGSH*PTPAGDSVLMA
Trigger: TGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGCAGTGGGACCCCAGGTCTAAACGCTTAGTTGGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TGTTGGGATGGATCTTTCCCTCCTTCAGCTTCCGCCTaGTGGCAATGCATGGGGTCCTGCGCCCCCATTTCT +
Preference number: 3 (lower is better)
Translates to: CWDGSFPPSASA*WQCMGSCAPIS
Trigger: AGAAATGGGGGCGCAGGACCCCATGCATTGCCAGCAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TTGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCCTaGCCCCTAGCTGGGCTGCAGCGCATCCTAACAATG +
Preference number: 3 (lower is better)
Translates to: LFGGSMDTGACP*PLAGLQRILTM
Trigger: CATTGTTAGGATGCGCTGCAGCCCAGCTAGGGGGCAGGGACAGGCACCTGTGTCCATGCTACCTCCAAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTTaGCCCCTACTCGGGAAACGTCTGCCTGTTCTCGAT +
Preference number: 3 (lower is better)
Translates to: VGLHREHGFQWL*PLLGKRLPVLD
Trigger: ATCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GTGTCAGTCGGACTGCACAGGGAACACGGTTTCCAGTaGCTTTGGCCCCTACTCGGGAAACGTCTGCCTGTT +
Preference number: 3 (lower is better)
Translates to: VSVGLHREHGFQ*LWPLLGKRLPV
Trigger: AACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACTGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GTGGGTCTCCACTGTACCTCAGGAACGCCTGGGTGCTaGCTGTTCCCTTGCTCTTCTGCTGAAGTGGCAGAT +
Preference number: 3 (lower is better)
Translates to: VGLHCTSGTPGC*LFPCSSAEVAD
Trigger: ATCTGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTACAGTGGAGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp ACACAGGGAACACACCTGCGCCCGCTCCCGCTGAGTTaGCCACACCAAAGCTGCTGTCATTTCTCACACTTG +
Preference number: 3 (lower is better)
Translates to: TQGTHLRPLPLS*PHQSCCHFSHL
Trigger: CAAGTGTGAGAAATGACAGCAGCTTTGGTGTGGTCAACTCAGCGGGAGCGGGCGCAGGTGTGTTCCCTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR TCA 72 bp GGGCAGGGACAAAAGCTCCCTACAGGCTGGCACAGATaGACCCCTACCAAGGAGGCTTCCAGACATGACACA +
Preference number: 3 (lower is better)
Translates to: GQGQKLPTGWHR*TPTKEASRHDT
Trigger: TGTGTCATGTCTGGAAGCCTCCTTGGTAGGGGTTCATCTGTGCCAGCCTGTAGGGAGCTTTTGTCCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR TCA 72 bp CAACTTCCCTGCGCCCTTACCCTGCACGGTGTTGGCTaGGGCCCTAGACATCTTGCTTGGAGATCTCTGACA +
Preference number: 3 (lower is better)
Translates to: QLPCALTLHGVG*GPRHLAWRSLT
Trigger: TGTCAGAGATCTCCAAGCAAGATGTCTAGGGCCTCAGCCAACACCGTGCAGGGTAAGGGCGCAGGGAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp GGTAGGGTGCCTGGCCCCTCAAAACGAGTGCTGCTCTaGGCTTGTTGGGATGGATCTTTCCCTCCTTCAGCT +
Preference number: 3 (lower is better)
Translates to: GRVPGPSKRVLL*ACWDGSFPPSA
Trigger: AGCTGAAGGAGGGAAAGATCCATCCCAACAAGCTCAGAGCAGCACTCGTTTTGAGGGGCCAGGCACCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TGTACCTCAGGAACGCCTGGGTGCTGGCTGTTCCCTTaGTCTTCTGCTGAAGTGGCAGATTACCAACCAGGC +
Preference number: 3 (lower is better)
Translates to: CTSGTPGCWLFP*SSAEVADYQPG
Trigger: GCCTGGTTGGTAATCTGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TCCTGGGTAGGGTGCCTGGCCCCTCAAAACGAGTGCTaGTCTGAGCTTGTTGGGATGGATCTTTCCCTCCTT +
Preference number: 3 (lower is better)
Translates to: SWVGCLAPQNEC*SELVGMDLSLL
Trigger: AAGGAGGGAAAGATCCATCCCAACAAGCTCAGAGCAGCACTCGTTTTGAGGGGCCAGGCACCCTACCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGGCTTaGTTCCCATGGATACTCCTACAACAAGTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ACTCARWQSGGA*FPWILLQQVGR
Trigger: CCTCCCAACTTGTTGTAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR CAA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCAGGACAAAACTCATCTTaGACTTATGCCGCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAAGQNSS*TYAAGL
Trigger: GAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCC...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTGGGGCTGAGTATGATTaGTCTGGCGACTGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPGAEYD*SGDCRD
Trigger: GTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCC...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGGGGGCTGAGTATGATTaGTCTGGCGACTGCAGAGAC +
Preference number: 3 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMGAEYD*SGDCRD
Trigger: GTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCC...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAAAAACCCGTGTGTCATaGATCAGCACCATTTGTGGT +
Preference number: 3 (lower is better)
Translates to: WQCMGSCAPISASVSQGTKTRVS*ISTICG
Trigger: ACCACAAATGGTGCTGATCAATGACACACGGGTTTT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCTTCCCAACCTACTTCTaGGTGCAAGTTGACCAAATC +
Preference number: 3 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPFPTYF*VQVDQI
Trigger: GATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAA...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp GCACAGATGAACCCCTACCAAGGAGGCTTCCAGACATaGCACACACAGCTAACACAGGGAACACACCTGCGC +
Preference number: 3 (lower is better)
Translates to: AQMNPYQGGFQT*HTQLTQGTHLR
Trigger: GCGCAGGTGTGTTCCCTGTGTTAGCTGTGTGTGTCATGTCTGGAAGCCTCCTTGGTAGGGGTTCATCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR TCA 72 bp CCTGCCTCTGCTCGGCTACTCGCTCACCATCCCCTCTaGGTCCGAGAACATCCAGAAAGACTACGTGTTCAA +
Preference number: 3 (lower is better)
Translates to: PASARLLAHHPL*VREHPERLRVQ
Trigger: TTGAACACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCCGAGCAGAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CCGCTACAGCAATCGCACAGATCAGCAACCTCCAACTaGATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCA +
Preference number: 3 (lower is better)
Translates to: PLQQSHRSATSN*IISVSKCASSP
Trigger: TGGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTGTGCGATTGCTGTAGCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 72 bp GCAAAGGGACGAAATGAGCCACCAGTGCGTCAGGCCTaGTCAGAGTTGTTTGGAGGTAGCATGGACACAGGT +
Preference number: 3 (lower is better)
Translates to: AKGRNEPPVRQA*SELFGGSMDTG
Trigger: ACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp TCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCTaGACACCTGAAGATGAACTGTCAAGGCAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: SQSLSQLWEVSA*TPEDELSRQQH
Trigger: GTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
3UTR CCA 72 bp ATGAACAGCGCTCCCACCTCCAGTCCTGGCATCCGCTaGGGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAA +
Preference number: 3 (lower is better)
Translates to: MNSAPTSSPGIR*GRCSLASASIK
Trigger: TTTAATACTGGCACTAGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGAGCGCTGTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTTaGGGAGTCCGTCCTGCATTGTGCAGGATGTTCAGC +
Preference number: 3 (lower is better)
Translates to: QILKGLGQGQVI*GVRPALCRMFS
Trigger: GCTGAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTTGTCCCAGGCCTTTCAGGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp GGGAATGGGAAACGTGGATCAGTTCAACACATACAAGCCACACACTCTGTGCCCGCAGTCAGGAGGGGCTaGGTTCCCATGGATACTCCT +
Preference number: 3 (lower is better)
Translates to: GNGKRGSVQHIQATHSVPAVRRG*VPMDTP
Trigger: AGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGC...GGGCACAGAGTGTGTGGCTTGTATGTGTTGAACTGATCCACGTTTCCCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR CAA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTAGAGTCTCTTGTGTATaGATGGCCGGACACACTCGT +
Preference number: 3 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLRVSCV*MAGHTR
Trigger: ACGAGTGTGTCCGGCCATCAATACACAAGAGACTCT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp GCACACAGCGTTCCACTGCGGGGTTTCACGCTCACCTaGAAACACCTGTTCCCAACCTACTTCTTGGTGCAA +
Preference number: 3 (lower is better)
Translates to: AHSVPLRGFTLT*KHLFPTYFLVQ
Trigger: TTGCACCAAGAAGTAGGTTGGGAACAGGTGTTTTCAGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CCCCACGTGTTGAGTCACAAAGAGTCTCTTGTGTATTaGTGGCCGGACACACTCGTTTCCGCAGTGGCTGCT +
Preference number: 3 (lower is better)
Translates to: PHVLSHKESLVY*WPDTLVSAVAA
Trigger: AGCAGCCACTGCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGACTCTTTGTGACTCAACACGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CCCTGTCCACCCGAGGCCCTCAACTCTAGGGAAGACTaGCATTATCATCCACTGAAGGACAACTTCTGCCCT +
Preference number: 3 (lower is better)
Translates to: PCPPEALNSRED*HYHPLKDNFCP
Trigger: AGGGCAGAAGTTGTCCTTCAGTGGATGATAATGTCAGTCTTCCCTAGAGTTGAGGGCCTCGGGTGGACAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCAAAAGCCAGCTTCCTaGGCTAAGATGCCCTTAAAA +
Preference number: 3 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAQKPAS*AKMPLK
Trigger: TTTTAAGGGCATCTTAGCCAAGGAAGCTGGCTTTTG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 72 bp CCACCAAAGTGTCAGGAGTCCGTCCAAACAAAAGGTTaGCTAACTGGCGTTCCCGTGTTGCAGGTGGATGGA +
Preference number: 3 (lower is better)
Translates to: PPKCQESVQTKG*LTGVPVLQVDG
Trigger: TCCATCCACCTGCAACACGGGAACGCCAGTTAGTCAACCTTTTGTTTGGACGGACTCCTGACACTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TTCCAAGAAAATCAGAACCCAGCAAGAAGTGGCCAGTaGACCCCAAACCACACTGGTGTCCACCTCATTGGC +
Preference number: 3 (lower is better)
Translates to: FQENQNPARSGQ*TPNHTGVHLIG
Trigger: GCCAATGAGGTGGACACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGCTGGGTTCTGATTTTCTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 72 bp GTGGATCAGTTCAACACATACAAGCCACACACTCTGTaGCCTGGAGCTGCCCTGGGGAAATCAAGTCACGTA +
Preference number: 3 (lower is better)
Translates to: VDQFNTYKPHTL*PGAALGKSSHV
Trigger: TACGTGACTTGATTTCCCCAGGGCAGCTCCAGGGCACAGAGTGTGTGGCTTGTATGTGTTGAACTGATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR GCA 72 bp TGGACACTGGTGGTTCTGACCTGTGACCAGCACCTCTaGTTCCTGTGTGCCCTCAAGAAAATACTAGTGTGG +
Preference number: 3 (lower is better)
Translates to: WTLVVLTCDQHL*FLCALKKILVW
Trigger: CCACACTAGTATTTTCTTGAGGGCACACAGGAAGCAGAGGTGCTGGTCACAGGTCAGAACCACCAGTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp AACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCTaGAAACAAACAGCAACTTGCAAACGGACGAAGAGC +
Preference number: 3 (lower is better)
Translates to: NAPSLWSSDWCS*KQTATCKRTKS
Trigger: GCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp AGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTaGTGTAGCTGGAAACAAACAGCAACTTGCAAACGG +
Preference number: 3 (lower is better)
Translates to: RTRNAPSLWSSD*CSWKQTATCKR
Trigger: CCGTTTGCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp AGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGTCCAAACGCCTGCACTaGTGCCAGATGGCAGTCAGG +
Preference number: 3 (lower is better)
Translates to: SKRDLTCAKLLYVLSGGTSKRLH*CQMAVR
Trigger: CCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGA...CGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR-3UTR CAA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGATAAGCCGTGGTGTTTaGCTGTCTGTCTGTGTCACA +
Preference number: 3 (lower is better)
Translates to: GYSLTIPSESENIQKDYVISRGV*LSVCVT
Trigger: TGTGACACAGACAGACAGCAAAACACCACGGCTTAT...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTTCGCGACCCCACGTGTaGAGTCACAAAGAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVSRPHV*SHKESL
Trigger: AAGAGACTCTTTGTGACTCAACACGTGGGGTCGCGA...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTCACCCACTAACTTCCTaGCTTCCAAAAATCCTGTCT +
Preference number: 3 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPHPLTS*LPKILS
Trigger: AGACAGGATTTTTGGAAGCAAGGAAGTTAGTGGGTG...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGACAGACCAGCAGCAGTaGACGCTGAGGCAGGTTCCA +
Preference number: 3 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKTDQQQ*TLRQVP
Trigger: TGGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGT...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
3UTR TCA 72 bp CCCTATAGCTTAGAGGCCACTAGACCAGCAGATAGCTaGGCTACATCCCCAAGCTCACCCACTAACTTCCTT +
Preference number: 3 (lower is better)
Translates to: PYSLEATRPADS*ATSPSSPTNFL
Trigger: AAGGAAGTTAGTGGGTGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCTAGTGGCCTCTAAGCTATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 72 bp CCCTCAACTCTAGGGAAGACTGACATTATCATCCACTaGAGGACAACTTCTGCCCTAGGAAGGGCCACCTGT +
Preference number: 3 (lower is better)
Translates to: PSTLGKTDIIIH*RTTSALGRATC
Trigger: ACAGGTGGCCCTTCCTAGGGCAGAAGTTGTCCTTCAGTGGATGATAATGTCAGTCTTCCCTAGAGTTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CACAGCAAACCAAGAAAAACAGACACACTGGCTGCCTaGCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAA +
Preference number: 3 (lower is better)
Translates to: HSKPRKTDTLAA*LASIGPFQRSK
Trigger: TTTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTTTTTCTTGGTTTGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 72 bp AGGCGGCCTGACTTCACCTTGTGTTTCTGTAAGCGATaGCCACCAAAGTGTCAGGAGTCCGTCCAAACAAAA +
Preference number: 3 (lower is better)
Translates to: RRPDFTLCFCKR*PPKCQESVQTK
Trigger: TTTTGTTTGGACGGACTCCTGACACTTTGGTGGGCATCGCTTACAGAAACACAAGGTGAAGTCAGGCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTaGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCC +
Preference number: 3 (lower is better)
Translates to: PHVCKTSLCTVR*DAVSGKTQKSP
Trigger: GGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
3UTR-3UTR CAA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTCCATCTGAGTGGAGTTaGAGACACACTACACATGAG +
Preference number: 3 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVPSEWS*RHTTHE
Trigger: CTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGG...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp GCACGGCCACACATACACAGCAGGTGCCCTGTCCTCTaGAGAGTCACATTTCAAGGAGTATGCAAAATAAGC +
Preference number: 3 (lower is better)
Translates to: ARPHIHSRCPVL*RVTFQGVCKIS
Trigger: GCTTATTTTGCATACTCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCTGCTGTGTATGTGTGGCCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CCA 72 bp CCACCACATCCAGCAGAAAACATAAAATTCTGTGTGTaGCCCACGCTGTACTTCTACTGGCCAGCACTGGTA +
Preference number: 3 (lower is better)
Translates to: PPHPAENIKFCV*PTLYFYWPALV
Trigger: TACCAGTGCTGGCCAGTAGAAGTACAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CCA 72 bp CCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTTaGGGACAAGGCAGTCTCCTCAGCTATTTATTTCTG +
Preference number: 3 (lower is better)
Translates to: PPEVTTHSFLET*GQGSLLSYLFL
Trigger: CAGAAATAAATAGCTGAGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CCTGGACTGTCACCGTCCTGTGAGTGGTGTACACAATaGGAAGATAATAAGCCGTGGTGTTTTGCTGTCTGT +
Preference number: 3 (lower is better)
Translates to: PGLSPSCEWCTQ*EDNKPWCFAVC
Trigger: ACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACCACTCACAGGACGGTGACAGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 3 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 3 (lower is better)
Translates to: LVALRGKGLSMICLATAEANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR-3UTR CAA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTTTGATTCCAAACTACTaGCTGGACACTGGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVLIPNY*LDTGGS
Trigger: AGAACCACCAGTGTCCAGCAAGTAGTTTGGAATCAA...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp GGCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTaGGTCTCTGCTGGTGATGTCACTTTGGCAAAGGGA +
Preference number: 3 (lower is better)
Translates to: GIKCLYKVVQLL*VSAGDVTLAKG
Trigger: TCCCTTTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCTTCCCGGTGTTTGTTaGTTTGTTTGCAATACACTC +
Preference number: 3 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHLPGVC*FVCNTL
Trigger: GAGTGTATTGCAAACAAACAAACAAACACCGGGAAG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp CATAAAAGAATGCTTCATGTACCAGTCAACAGCTGCTaGACGAACCCTCCCACTCCAGAAACCCAGAGATTT +
Preference number: 3 (lower is better)
Translates to: HKRMLHVPVNSC*TNPPTPETQRF
Trigger: AAATCTCTGGGTTTCTGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTACATGAAGCATTCTTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 72 bp TTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTaGTTAAGAACATGCCCTATTAGGTCACTCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LSFIGPCMIQSL*LRTCPIRSLCL
Trigger: AAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR GCA 72 bp GCAAACGGACGAAGAGCCTGCCGTGTGTTAATCATTTaGCTTACAAGATGTACCAGACGGTTTCCAGTACTA +
Preference number: 3 (lower is better)
Translates to: ANGRRACRVLII*LTRCTRRFPVL
Trigger: TAGTACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp TCAGTGGCATTAAGTGCCTTTACAAGGTGGTGCAACTaGTTTGAGTCTCTGCTGGTGATGTCACTTTGGCAA +
Preference number: 3 (lower is better)
Translates to: SVALSAFTRWCN*FESLLVMSLWQ
Trigger: TTGCCAAAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GGGAACAATTCAGTGGCATTAAGTGCCTTTACAAGGTaGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTCA +
Preference number: 3 (lower is better)
Translates to: GNNSVALSAFTR*CNCFESLLVMS
Trigger: TGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGAATTGTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 3 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR-3UTR CAA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGCAGGGATAAAACTATaGGATAAGGAAGGCAGATGC +
Preference number: 3 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCAGIKL*DKEGRC
Trigger: GCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 72 bp TCAATCTGTGTGATTCGCAAGGACAAAACTCATCTTTaGCTTATGCCGCCGGCCTCACGTAAGGAAACAGTT +
Preference number: 3 (lower is better)
Translates to: SICVIRKDKTHL*LMPPASRKETV
Trigger: AACTGTTTCCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCCTTGCGAATCACACAGATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR TCA 72 bp GCTGGGTTGATCAAAGTTGGGATTTTGCTATTATTGTaGCAAAGGGTCCAGCCTTGCAGTCCAGATCCTGAA +
Preference number: 3 (lower is better)
Translates to: AGLIKVGILLLL*QRVQPCSPDPE
Trigger: TTCAGGATCTGGACTGCAAGGCTGGACCCTTTGTCACAATAATAGCAAAATCCCAACTTTGATCAACCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp ATGCAGATACTCGTTTTCTTGAGCTTTATTGGCCCCTaGATGATACAGTCCCTGTGCTTAAGAACATGCCCT +
Preference number: 3 (lower is better)
Translates to: MQILVFLSFIGP*MIQSLCLRTCP
Trigger: AGGGCATGTTCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp GGAAACAAACAGCAACTTGCAAACGGACGAAGAGCCTaGCGTGTGTTAATCATTTGCCTTACAAGATGTACC +
Preference number: 3 (lower is better)
Translates to: GNKQQLANGRRA*RVLIICLTRCT
Trigger: GGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp ATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTTaGGACACACTACACATGAGACACACAATGATGCAG +
Preference number: 3 (lower is better)
Translates to: ILVWVTVHLSGV*DTLHMRHTMMQ
Trigger: CTGCATCATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp AACAATTCAGTGGCATTAAGTGCCTTTACAAGGTGGTaGAACTGCTTTGAGTCTCTGCTGGTGATGTCACTT +
Preference number: 3 (lower is better)
Translates to: NNSVALSAFTRW*NCFESLLVMSL
Trigger: AAGTGACATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGCCACTGAATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp CACAATGATGCAGATACTCGTTTTCTTGAGCTTTATTaGCCCCTGCATGATACAGTCCCTGTGCTTAAGAAC +
Preference number: 3 (lower is better)
Translates to: HNDADTRFLELY*PLHDTVPVLKN
Trigger: GTTCTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTGCATCATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTaGAACTGCGCATTCTCTAGTAGTATATATCGTGCC +
Preference number: 3 (lower is better)
Translates to: LSLFLYPPATVV*NCAFSSSIYRA
Trigger: GGCACGATATATACTACTAGAGAATGCGCAGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR TCA 72 bp CCAGACTTTACCAAATGGGACAGCATTGCACCCATTTaGGAAGCACCGGTAGAGAGCAAATACACAAATATA +
Preference number: 3 (lower is better)
Translates to: PDFTKWDSIAPI*EAPVESKYTNI
Trigger: TATATTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCATTTGGTAAAGTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp AAAAATGTCTCCAGACTTTACCAAATGGGACAGCATTaGACCCATTTGAGAAGCACCGGTAGAGAGCAAATA +
Preference number: 3 (lower is better)
Translates to: KNVSRLYQMGQH*THLRSTGREQI
Trigger: TATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCATTTGGTAAAGTCTGGAGACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CCA 72 bp GGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTaGTTTGAAACTGCGCATTCTCTAGTAGTATATATC +
Preference number: 3 (lower is better)
Translates to: GTCRYSYILLQL*FETAHSLVVYI
Trigger: GATATATACTACTAGAGAATGCGCAGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR GCA 72 bp AATGCAGGGATAAAACTATTGGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGAACCCAGCAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: NAGIKLLDKEGR*TSKKIRTQQEV
Trigger: CACTTCTTGCTGGGTTCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CCA 72 bp CAAGAAAATACTAGTGTGGGTAACAGTCCATCTGAGTaGAGTTTGAGACACACTACACATGAGACACACAAT +
Preference number: 3 (lower is better)
Translates to: QENTSVGNSPSE*SLRHTTHETHN
Trigger: ATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATTTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGCGCTGCTGCCGCTACTaGTGGGCTGGAGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAERCCRY*WAGAGR
Trigger: CCGCCCGGCTCCAGCCCAGCAGTAGCGGCAGCAGCG...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGAGTACCTCCCCAGGCTaGAGGCTCTGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAESTSPG*RLWAAE
Trigger: CTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CAA 72 bp GAGGGGGCCGCCCTCCTCTGGAATGACTCAGGCCTCTaGGGCTCCAGGTGTCACGGGGATGACAGGGATGCT +
Preference number: 4 (lower is better)
Translates to: EGAALLWNDSGL*GSRCHGDDRDA
Trigger: AGCATCCCTGTCATCCCCGTGACACCTGGAGCCCAAGAGGCCTGAGTCATTCCAGAGGAGGGCGGCCCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGAGTCCCCAGAATCACTaGCCCCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAESPQNH*PPRLGH
Trigger: ATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTACCTCCCCAGGCTaGAGGCTCTGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLSTSPG*RLWAAE
Trigger: CTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTCGCTGCTGCCGCTACTaGTGGGCTGGAGCCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETRCCRY*WAGAGR
Trigger: CCGCCCGGCTCCAGCCCAGCAGTAGCGGCAGCAGCG...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTGGGGGTGTGGACTCCTCTGGAGCCGCTaGACGAGCTGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: PEDELSRQQHAWSSWGCGLLWSR*TSWATM
Trigger: CATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGGAG...TCCACACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCGTGGCCCTGGGACCTTaGGGGTGGCAGCATGAGGTG +
Preference number: 4 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSVALGP*GWQHEV
Trigger: CACCTCATGCTGCCACCCCCAAGGTCCCAGGGCCAC...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTCCCAAGTCAGCGAGTaGGATGGCCCCACCCTTCCC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLSQVSE*DGPTLP
Trigger: GGGAAGGGTGGGGCCATCTCACTCGCTGACTTGGGA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAGGCAAAGGGACGAAATaGGCCACCAGTGCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: WQCMGSCAPISASVSQGTGKGTK*ATSASG
Trigger: GCCTGACGCACTGGTGGCTCATTTCGTCCCTTTGCC...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGGAGTCGTCATGGCTCTaGTCGGCCTTCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAEESSWL*SAFHLL
Trigger: CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTC...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCGGGTCCCAACTTCCCTaGGCCCTTACCCTGCACGGT +
Preference number: 4 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSGSQLP*ALTLHG
Trigger: ACCGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACCC...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTGACCTGGGGTCCCACTaGCCGACACCAGCAGGCGAT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLADLGSH*PTPAGD
Trigger: ATCGCCTGCTGGTGTCGGGCAGTGGGACCCCAGGTC...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGACAGGGACCCCAAGATaGCCCACAGCAAGTGACAAG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAETGTPR*PTASDK
Trigger: CTTGTCACTTGCTGTGGGGCATCTTGGGGTCCCTGT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTCTACAGCTCAGTCCTaGCGGGACTTGCCACCCGGG +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLSTAQS*RDLPPG
Trigger: CCCGGGTGGCAAGTCCCGCCAGGACTGAGCTGTAGA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTGGGGGTGGGTGCAGCTCGGAATaGGGTGGTTCCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: GHLKMNCQGSSTPGPPGGGCSSE*GGSPLA
Trigger: TGCAAGAGGGGAACCACCTCATTCCGAGCTGCACCC...ACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGAGACCAGCAGATAGCTaGGCTACATCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAERPADS*ATSPSS
Trigger: TGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCGCGACCCCACGTGTTaGGTCACAAAGAGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLRDPTC*VTKSLL
Trigger: CAAGAGACTCTTTGTGACTCAACACGTGGGGTCGCG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGCCCTTGCTCTTCTGCTaGAGTGGCAGATTACCAACC +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAEPLLFC*SGRLPT
Trigger: GGTTGGTAATCTGCCACTTCAGCAGAAGAGCAAGGG...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTATCTCTGGAGCCGCTaGACGAGCTGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLYLWSR*TSWATM
Trigger: CATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGATA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGACTACTTGTGCAGTTTaGCCTGCTGAGCCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLTTCAV*PAEPSS
Trigger: CGAGGAGGGCTCAGCAGGGCAAACTGCACAAGTAGT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCCTGCGCCCTTACCCTaGACGGTGTTGGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLPAPLP*TVLAEA
Trigger: GGCCTCAGCCAACACCGTGCAGGGTAAGGGCGCAGG...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGCTGGGGACTTCTCCCTaGAGTCTTCCAAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAELGTSP*SLPKCL
Trigger: GAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAG...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCACCCGTCTCAAAGGCTaGGCCTGGCTACAGACCAGC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLTRLKG*AWLQTS
Trigger: GCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGT...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCACCCCAAACCACACTaGTGTCCACCTCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLHPKPH*CPPHWQ
Trigger: CTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTGGGTGTCTGTCAGCTaGCCAGCCACGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLWVSVS*PATPKS
Trigger: GGACTTTGGCGTGGCTGGCCAGCTGACAGACACCCA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGAGCCCAGAGGGGCCCTaGGTAGTTACCTCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: EVSAWTPEDELSRQQHAWSPEGP*VVTSGA
Trigger: GGCTCCAGAGGTAACTACCCAGGGCCCCTCTGGGCT...CCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp CATGATCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCTGGACACCTGAAGCACGCCTGGTCCTCCTaGGGGTGTGGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: HDHRVSASFGRCQPGHLKHAWSS*GCGGQP
Trigger: GGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTG...CTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTCTGTGATCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGAGGTGCCCTGTCCTCTaGAGAGTCACATTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAERCPVL*RVTFQG
Trigger: TCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAGCTCACCATCCCCTCTaGGTCCGAGAACATCCAGAA +
Preference number: 4 (lower is better)
Translates to: WQCMGSCAPISASVSQGTAHHPL*VREHPE
Trigger: TTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGC...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTTGAGTCTCTGCTGGTaGTGTCACTTTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAELSLCW*CHFGKG
Trigger: CCCTTTGCCAAAGTGACATCACCAGCAGAGACTCAA...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTAGTCCCCAGAATCACTaGCCCCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLASPQNH*PPRLGH
Trigger: ATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACT...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCGGGCCGCGTCTCCATaGACGGCGCCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPRAASP*TAPGRS
Trigger: GCTCCTCCCTGGCGCCGTGCATGGAGACGCGGCCCG...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTCAGGAACGCCTGGGTaGTGGCTGTTCCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLSGTPG*WLFPCS
Trigger: AGAGCAAGGGAACAGCCAGCACCCAGGCGTTCCTGA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCACCTCGCTCCTAACTaGTCCAATGGAGCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLHLAPN*SNGAGS
Trigger: ACTGCCCGCTCCATTGGAGCAGTTAGGAGCGAGGTG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGTTGGGGAGTCCGTCCTaGATTGTGCAGGATGTTCAG +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLLGSPS*IVQDVQ
Trigger: CTGAACATCCTGCACAATGCAGGACGGACTCCCCAA...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCTGCGCCCCCATTTCTaGCTCGGTGTCACAGGGCAC +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLLRPHF*LGVTGH
Trigger: GTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAG...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTACAGGTGCCTGTCCCTaGCCCCTAGCTGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPTGACP*PLAGLQ
Trigger: CTGCAGCCCAGCTAGGGGGCAGGGACAGGCACCTGT...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGACAAGGTGGTGCAACTaGTTTGAGTCTCTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAETRWCN*FESLLV
Trigger: CACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTGGGGGTAGTGCATTCAACAGGTaGGGCCACTGGGCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GHLKMNCQGSSTPGPPGGSAFNR*GHWAGT
Trigger: TGTCCCTGCCCAGTGGCCCCACCTGTTGAATGCACT...ACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCGGAACGCCTGGGTGCTaGCTGTTCCCTTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLGTPGC*LFPCSS
Trigger: AGAAGAGCAAGGGAACAGCCAGCACCCAGGCGTTCC...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGCTGGGACCTTGGGGGTaGCAGCATGAGGTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVLGPWG*QHEVRG
Trigger: CCCCCTCACCTCATGCTGCCACCCCCAAGGTCCCAG...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp GGTCCCAACTTCCCTGCGCCCTTACCCTGCACGGTGTaGGCTGAGGCCCTAGACATCTTGCTTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: GPNFPAPLPCTV*AEALDILLGDL
Trigger: GAGATCTCCAAGCAAGATGTCTAGGGCCTCAGCCAACACCGTGCAGGGTAAGGGCGCAGGGAAGTTGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp GGGTTGGCTTTATCTACAGCTCAGTCCTGGCGGGACTaGCCACCCGGGCCATCACGTACAGGCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: GLALSTAQSWRD*PPGPSRTGKHW
Trigger: CCAGTGTTTGCCTGTACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGACTGAGCTGTAGATAAAGCCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp ATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTTGTTaGGAGGTAGCATGGACACAGGTGCCTGTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: MSHQCVRPAQSC*EVAWTQVPVPA
Trigger: GGCAGGGACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTSSPGR*PGHSAA
Trigger: AGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCT...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVSSPGR*PGHSAA
Trigger: AGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCACTGCATCATCTCGGTaGGCAAGTGCGCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLTASSR*ASAQAV
Trigger: GACTGCTTGCGCACTTGCTCACCGAGATGATGCAGT...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCACTGCATCATCTCGGTaGGCAAGTGCGCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSTASSR*ASAQAV
Trigger: GACTGCTTGCGCACTTGCTCACCGAGATGATGCAGT...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCAATCTCGGTGAGCAAGTaGGCAAGCAGTCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAAISVSK*ASSPGR
Trigger: GCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGAT...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCCAGTCAACAGCTGCTaGACGAACCCTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAPVNSC*TNPPTP
Trigger: TGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGGTAAATCAGAAAAGCTaGTGTCCGCCCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLVNQKS*CPPWLT
Trigger: AGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTAC...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTGGGGGTGTGGAAAACGCCTGCACTTGTaGCAGATGGCAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PEDELSRQQHAWSSWGCGKRLHL*QMAVRR
Trigger: CCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTT...TCCACACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp CACCCCACTGAGTCCTCACCCATAGTGCATTCAACAGGTGGGGCCACTGGGCAGCCAGCACACATCCACTaGCTCCAAACGCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: HPTESSPIVHSTGGATGQPAHIH*LQTPAL
Trigger: AAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGG...CTGCCCAGTGGCCCCACCTGTTGAATGCACTATGGGTGAGGACTCAGTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR GCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCAGTGCCACCAGCTCTaGCTCGCGACCCCACGTGTT +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAEQCHQL*LATPRV
Trigger: AACACGTGGGGTCGCGAGGCAGAGCTGGTGGCACTG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGTGGTGCAGGGAGAGCTaGTCTCTGTGCCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMWCRES*SLCPPG
Trigger: CCCAGGAGGGCACAGAGAGCAGCTCTCCCTGCACCA...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACTTCCTGGGTAGGGTaGCTGGCCCCTCAAAACGAG +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLATSWVG*LAPQNE
Trigger: CTCGTTTTGAGGGGCCAGGCACCCTACCCAGGAAGT...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAATGCAGGCCTGGAAGTaGCGACACAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: WQCMGSCAPISASVSQGTMQAWK*RHKSQL
Trigger: AAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCAT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCTCAAAGGCTGGGCCTaGCTACAGACCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLALKGWA*LQTSSS
Trigger: ACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCGAGGAGGGAGCTGCCTaGGCTCCCAAGTCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCEEGAA*APKSLS
Trigger: AGACAGGGACTTGGGAGCCCAGGCAGCTCCCTCCTC...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAGGGTGCAGCTCGGAATaGGGTGGTTCCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQGCSSE*GGSPLA
Trigger: TGCAAGAGGGGAACCACCTCATTCCGAGCTGCACCC...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTGGGTGCAGCTCGGAATaGGGTGGTTCCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPGCSSE*GGSPLA
Trigger: TGCAAGAGGGGAACCACCTCATTCCGAGCTGCACCC...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCAGACCAGCAGATAGCTaGGCTACATCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLRPADS*ATSPSS
Trigger: TGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCT...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTGGAGGACAGCCCAGTaGCAAATCACCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: EVSAWTPEDELSRQQHAWWRTAQ*QITLRS
Trigger: TGACCTGAGGGTGATTTGTCACTGGGCTGTCCTCCA...CCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR TCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTGCCTGTTCTCGATGGTaGTGGGGTGGCTGCCATTCC +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETACSRW*WGGCHS
Trigger: GGAATGGCAGCCACCCCATCACCATCGAGAACAGGC...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGCCTGCAACTGTGGTTTaGAACTGCGCATTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLPATVV*NCAFSS
Trigger: ACTAGAGAATGCGCAGTTTCAAACCACAGTTGCAGG...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCGGTTTCACGCTCACCTaGAAACACCTGTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLGFTLT*KHLFPT
Trigger: GGTTGGGAACAGGTGTTTTCAGGTGAGCGTGAAACC...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTCGACCTCTCAGCGTCTaGATGAACAGCGCTCCCACC +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPRPLSV*MNSAPT
Trigger: GGTGGGAGCGCTGTTCATTCAGACGCTGAGAGGTCG...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGCTTCCAGCTCCACACTaGGTGAGTGCCCAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVLPAPH*VSAQAS
Trigger: ACTGGCCTGGGCACTCACTCAGTGTGGAGCTGGAAG...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATCAGGTGTCACGGGGATaGCAGGGATGCTGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNQVSRG*QGCWRG
Trigger: CCCCCGCCAGCATCCCTGTCATCCCCGTGACACCTG...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCTATCTCTGGAGCCGCTaGACGAGCTGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSYLWSR*TSWATM
Trigger: CATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGATA...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGGACACACTGGCTGCCTaGCTAGCAAGCATAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMDTLAA*LASIGP
Trigger: GGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTC...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCGACACACTGGCTGCCTaGCTAGCAAGCATAGGCCCC +
Preference number: 4 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCDTLAA*LASIGP
Trigger: GGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTC...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCATCCAGAATGGGGTaGCCACGAAGGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLPSRMG*PRRCSF
Trigger: AAAGGAACACCTTCGTGGGCACCCCATTCTGGATGG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAACGGGCCGCGTCTCCATaGACGGCGCCAGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKRAASP*TAPGRS
Trigger: GCTCCTCCCTGGCGCCGTGCATGGAGACGCGGCCCG...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCCCTTTAGGTTCTGCATaGCGGGCAGGCCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCPLGSA*RAGPTA
Trigger: TGCAGTCGGGCCTGCCCGGCATGCAGAACCTAAAGG...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCACACAGCGTTCCACTaGGGGGTTTCACGCTCACCT +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLHTAFH*GVSRSP
Trigger: AGGTGAGCGTGAAACCCCGCAGTGGAACGCTGTGTG...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCCAGGCAAACACTGGCTaGCATGGTCCCTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSQANTG*HGPFQA
Trigger: GGCCTGGAAGGGACCATGGCAGCCAGTGTTTGCCTG...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAGGGCCACCTGTCTTCTaGCTGGACAAGGGACGGGGG +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTGPPVF*LDKGRG
Trigger: CCCCCGTCCCTTGTCCAGGCAGAAGACAGGTGGCCC...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGGCAGGTGCCCGCTGTaGTTCTCACAGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTGRCPL*FSQASL
Trigger: CAAGGAGGCCTGTGAGAAGCACAGCGGGCACCTGCC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAACCTTCAGCTTCCGCCTaGTGGCAATGCATGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQPSASA*WQCMGS
Trigger: GGACCCCATGCATTGCCAGCAGGCGGAAGCTGAAGG...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTGCCCCTCAAAACGAGTaGTGCTCTGAGCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAAPQNE*CSELVG
Trigger: CCCAACAAGCTCAGAGCAGCACTCGTTTTGAGGGGC...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCAGCTCGGAATGAGGTaGTTCCCCTCTTGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLQLGMR*FPSCKF
Trigger: GAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCTGGGGACTTCTCCCTaGAGTCTTCCAAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLLGTSP*SLPKCL
Trigger: GAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GTTCGAAAGGTAGACACCCCCTTCCCACGCACAGGGCCCTGCAGAAGAGGACCCCTCTTAATGCAGGCCTaGAAGTGGCGACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: VRKVDTPFPRTGPCRRGPLLMQA*KWRHKS
Trigger: GCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAG...GGGTCCTCTTCTGCAGGGCCCTGTGCGTGGGAAGGGGGTGTCTACCTTTCGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCACCCGTCTCAAAGGCTaGGCCTGGCTACAGACCAGC +
Preference number: 4 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCTRLKG*AWLQTS
Trigger: GCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGT...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCACCCCAAACCACACTaGTGTCCACCTCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAHPKPH*CPPHWQ
Trigger: CTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAATGGGTGTCTGTCAGCTaGCCAGCCACGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQWVSVS*PATPKS
Trigger: GGACTTTGGCGTGGCTGGCCAGCTGACAGACACCCA...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGGAGTGCCCAGGCCAGTaGGTCTCCACTGTACCTCAG +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVECPGQ*VSTVPQ
Trigger: CTGAGGTACAGTGGAGACCCACTGGCCTGGGCACTC...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCCACCTGTCTTCTGCCTaGACAAGGGACGGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSHLSSA*TRDGGW
Trigger: CCAACCCCCGTCCCTTGTCCAGGCAGAAGACAGGTG...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCATGACTCAGGCCTCTTaGGCTCCAGGTGTCACGGGG +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSMTQAS*APGVTG
Trigger: CCCCGTGACACCTGGAGCCCAAGAGGCCTGAGTCAT...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCACGGGGGAGCGGGGGTaGGGCCCACATCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPTGERG*GPHPSV
Trigger: GACTGAAGGATGTGGGCCCCACCCCCGCTCCCCCGT...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCCAGGCCCCACTTCCTaGGTAGGGTGCCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHPGPTS*VGCLAP
Trigger: AGGGGCCAGGCACCCTACCCAGGAAGTGGGGCCTGG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCAATGCTCCAGGGGCTaGGCCGGCCCTGAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPQCSRG*AGPEPG
Trigger: TCCAGGCTCAGGGCCGGCCCAGCCCCTGGAGCATTG...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp AGTCGGACTGCACAGGGAACACGGTTTCCAGTGGCTTaGGCCCCTACTCGGGAAACGTCTGCCTGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SRTAQGTRFPVA*APTRETSACSR
Trigger: TCGAGAACAGGCAGACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTCCCTGTGCAGTCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp GCCTGGCCCCTCAAAACGAGTGCTGCTCTGAGCTTGTaGGGATGGATCTTTCCCTCCTTCAGCTTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: AWPLKTSAALSL*GWIFPSFSFRL
Trigger: CAGGCGGAAGCTGAAGGAGGGAAAGATCCATCCCAACAAGCTCAGAGCAGCACTCGTTTTGAGGGGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp CGAAATGAGCCACCAGTGCGTCAGGCCTGCTCAGAGTaGTTTGGAGGTAGCATGGACACAGGTGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RNEPPVRQACSE*FGGSMDTGACP
Trigger: GGGACAGGCACCTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGGTGGCTCATTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCGACAAAACTCATCTTTaGCTTATGCCGCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSDKTHL*LMPPAS
Trigger: TGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTC...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGCTCAGGGCTGGCACTaGGAGGCTACTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTAQGWH*EATGDS
Trigger: ACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCCTCATGATCACAGAGTCACAGGCTGGCACAGATaGACCCCTACCAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGTQSQERPRNPPHDHRVTGWHR*TPTKEA
Trigger: AGCCTCCTTGGTAGGGGTTCATCTGTGCCAGCCTGT...GACTCTGTGATCATGAGGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGCTTCTTGGTGCAAGTTaGCCAAATCGTTTTAAGTGG +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAELLGAS*PNRFKW
Trigger: CCACTTAAAACGATTTGGTCAACTTGCACCAAGAAG...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTCTCTCAGCGTCTGAATaGACAGCGCTCCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETLSASE*TALPPP
Trigger: TGGAGGTGGGAGCGCTGTTCATTCAGACGCTGAGAG...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTCAGCTCCACACTGAGTaGGTGCCCAGGCCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVQLHTE*VPRPVG
Trigger: ACCCACTGGCCTGGGCACTCACTCAGTGTGGAGCTG...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTGAAGCTAAGCCCCAGTaGGACTGCCTACATGGTGTA +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAEAKPQ*DCLHGV
Trigger: TACACCATGTAGGCAGTCTCACTGGGGCTTAGCTTC...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGTGTCTGGAAACCTGCTaGGGAAATTCAAAAACAGCA +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAECLETC*GNSKTA
Trigger: TGCTGTTTTTGAATTTCCTCAGCAGGTTTCCAGACA...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCAGAGTCGTCATGGCTCTaGTCGGCCTTCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAAESSWL*SAFHLL
Trigger: CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTC...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGATCTCGGTGAGCAAGTaGGCAAGCAGTCCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTISVSK*ASSPGR
Trigger: GCGCCCTGGACTGCTTGCGCACTTGCTCACCGAGAT...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTAACAGACACACTGGCTaGCTGCCTAGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLANRHTG*LPSKHR
Trigger: CCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCGATTTGTCTGGCGACTaGAGAGACTCCCCGTTCATA +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLDLSGD*RDSPFI
Trigger: TATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATC...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCCATCCAGAATGGGGTaGCCACGAAGGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAPSRMG*PRRCSF
Trigger: AAAGGAACACCTTCGTGGGCACCCCATTCTGGATGG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GAAATCCCCCTCATGATCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCTGCTGCCTCCAAACGCCTaGACTTGTGCCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: EIPLMITESQPALGGVSLLPPNA*TCARWQ
Trigger: CTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAG...CAGGCTGACACCTCCCAAAGCTGGCTGAGACTCTGTGATCATGAGGGGGATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCCGTCCCGCCATTCTCTaGCATGTCCATGAAAATAGG +
Preference number: 4 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSRPAIL*HVHENR
Trigger: CCTATTTTCATGGACATGGCAGAGAATGGCGGGACG...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTATCCCCTTGCCAGCCTaGCTCTGCTCGGCTACTCGC +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVIPLPA*LCSATR
Trigger: GCGAGTAGCCGAGCAGAGGCAGGCTGGCAAGGGGAT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAAGTCCTGGCGGGACTTaGCACCCGGGCCATCACGTA +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTSPGGT*HPGHHV
Trigger: TACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGACT...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATCTTCAGTCACGGACATaGCCCAGCCCAGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNLQSRT*PSPGPW
Trigger: CCAGGGCCCTGGGCTGGGGCATGTCCGTGACTGAAG...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp TGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCCAGCTCGGAATGAGGTaGTTCCCCTCTTGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: WEVSAWTPEDELSRQQHAQLGMR*FPSCKF
Trigger: GAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTG...GGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCACTTAGAGAGTATCTCTaGAGCCGCTGCACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAALREYL*SRCTSW
Trigger: CCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAG...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCCTCAAAGGCTGGGCCTaGCTACAGACCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSLKGWA*LQTSSS
Trigger: ACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAG...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCTGCTGCCGCTACTGCTaGGCTGGAGCCGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCCCRYC*AGAGRP
Trigger: AGGCCGCCCGGCTCCAGCCCAGCAGTAGCGGCAGCA...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGTGCTGCCGCTACTGCTaGGCTGGAGCCGGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKCCRYC*AGAGRP
Trigger: AGGCCGCCCGGCTCCAGCCCAGCAGTAGCGGCAGCA...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GTACCAAACTCATCAACTAAGTCCCAGCCCAAGTGCAGGTCTCTCCTTCCCCAGCTGGGTAGTTACCTCTaGAGCCGCTGCACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPNSSTKSQPKCRSLLPQLGSYL*SRCTSW
Trigger: CCAGCTCGTGCAGCGGCTCCAGAGGTAACTACCCAG...CTGGGGAAGGAGAGACCTGCACTTGGGCTGGGACTTAGTTGATGAGTTTGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp GCCAGCTTTGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGTCTCAGCCAGCTTTaGGAGGTGTCAGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: ASFGRCQPGHLKMNCQGSSLSQL*EVSAWT
Trigger: TGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACT...GCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTACCTCAGGAACGCCTaGGTGCTGGCTGTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPYLRNA*VLAVPL
Trigger: CAAGGGAACAGCCAGCACCCAGGCGTTCCTGAGGTA...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTGGGGCCGCCCTCCTCTaGAATGACTCAGGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVGAALL*NDSGLL
Trigger: CAAGAGGCCTGAGTCATTCCAGAGGAGGGCGGCCCC...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp CGCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGGCTaGGTTCCCATGGATACTCCTACAACAAGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLHLCQMAVRRG*VPMDTPTTSWE
Trigger: CTCCCAACTTGTTGTAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR TCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCAGCAGTCCAGGGCGCTaGCCTGGGCACTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCSSPGR*PGHSAA
Trigger: AGCTGCCGAGTGCCCAGGTCAGCGCCCTGGACTGCT...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp AGTCTCAGGAAAGACCCAGAAATCCCCCTCATGATCACAGAGTCTCAGCCAGCTCCGCTCCCGCTGAGTTaGCCACACCAAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLRKDPEIPLMITESQPAPLPLS*PHQSCC
Trigger: ACAGCAGCTTTGGTGTGGTCAACTCAGCGGGAGCGG...AGCTGGCTGAGACTCTGTGATCATGAGGGGGATTTCTGGGTCTTTCCTGAGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR TCA 90 bp CTTTGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACTGGAGGACAGCCCAGTaGCAAATCACCCTCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LWEVSAWTPEDELSRQQHWRTAQ*QITLRS
Trigger: TGACCTGAGGGTGATTTGTCACTGGGCTGTCCTCCA...GTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR TCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATGCAGTTTGCCCTGCTaGGCCCTCCTCGCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKCSLPC*ALLAPG
Trigger: TCCCGGGGCGAGGAGGGCTCAGCAGGGCAAACTGCA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCGTACCAGTCAACAGCTaGTGCACGAACCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSVPVNS*CTNPPT
Trigger: AGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTAC...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATAGTACCTCCCCAGGCTaGAGGCTCTGGGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNSTSPG*RLWAAE
Trigger: CTCAGCTGCCCAGAGCCTGCAGCCTGGGGAGGTACT...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGATGATACAGTCCCTGTaGTTAAGAACATGCCCTATT +
Preference number: 4 (lower is better)
Translates to: NAGATSHPVHGPRLPEAEMIQSL*LRTCPI
Trigger: AATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTAGCTTTATTGGCCCCTaGATGATACAGTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLASFIGP*MIQSLC
Trigger: GCACAGGGACTGTATCATGCAGGGGCCAATAAAGCT...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGCCTCCAAACGCCTaGACTTGTGCCAGATGGCAG +
Preference number: 4 (lower is better)
Translates to: SQSLSQLWEVSAWTPEDELPPNA*TCARWQ
Trigger: CTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAG...TTCATCTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGCGGGCAGTGTCACTaGAGCAAGGTACTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSSGQCH*SKVLPA
Trigger: AGCTGGAAGTACCTTGCTGCAGTGACACTGCCCGCT...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTTCCGCCTGCTGGCAATaGATGGGGTCCTGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTISACWQ*MGSCAP
Trigger: GGGGGCGCAGGACCCCATGCATTGCCAGCAGGCGGA...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGGAGGTGGGCAGGGCTaGAACTGCCTCCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCGGGQG*NCLLGH
Trigger: GTGGCCCAGGAGGCAGTTGCAGCCCTGCCCACCTCC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGCCTCCGCTAGGTAGATaGCCCCTCGCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTPPLGR*PLAALQ
Trigger: TTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGG...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCTTAGAGAGTATCTCTaGAGCCGCTGCACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAELREYL*SRCTSW
Trigger: CCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTTCCCTCCGCACGCCTaGCTCTTCTCCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPFPPHA*LFSFNS
Trigger: AGAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAA...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAACAGTCCATCTGAGTaGAGTTTGAGACACACTACA +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLNSPSE*SLRHTT
Trigger: TGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCATCATTCCTGGAGACTTaGGGACAAGGCAGTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAASFLET*GQGSLL
Trigger: GAGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATGA...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGAACACGGTTTCCAGTaGCTTTGGCCCCTACTCGGG +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTEHGFQ*LWPLLG
Trigger: CCCGAGTAGGGGCCAAAGCCACTGGAAACCGTGTTC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATCCCACCTCCAGTCCTaGCATCCGCTGGGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKSHLQS*HPLGAL
Trigger: CAGCGCCCCCAGCGGATGCCAGGACTGGAGGTGGGA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCACTCGTTTCCGCAGTaGCTGCTTTCCTGGAAGACG +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAEHSFPQ*LLSWKT
Trigger: CGTCTTCCAGGAAAGCAGCCACTGCGGAAACGAGTG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTCGTACAGGCAAACACTaGCTGCCATGGTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETRTGKH*LPWSLP
Trigger: TGGAAGGGACCATGGCAGCCAGTGTTTGCCTGTACG...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCTCTCTGTGCCCTCCTaGGGCAGGTGCCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKLSVPS*GRCPLC
Trigger: GCACAGCGGGCACCTGCCCCAGGAGGGCACAGAGAG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACTCCCTGCCCCCTAGCTaGGCTGCAGCGCATCCTAAC +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHSLPPS*AAAHPN
Trigger: GTTAGGATGCGCTGCAGCCCAGCTAGGGGGCAGGGA...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAAGTGCCTTTACAAGGTaGTGCAACTGCTTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: WQCMGSCAPISASVSQGTSAFTR*CNCFES
Trigger: AGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp AACACAGGGAACACACCTGCGCCCGCTCCCGCTGAGTaGACCACACCAAAGCTGCTGTCATTTCTCACACTT +
Preference number: 4 (lower is better)
Translates to: NTGNTPAPAPAE*TTPKLLSFLTL
Trigger: AAGTGTGAGAAATGACAGCAGCTTTGGTGTGGTCAACTCAGCGGGAGCGGGCGCAGGTGTGTTCCCTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CAA 72 bp CCAGATCCTGAAAGGCCTGGGACAAGGCCAGGTAATTaGGGGAGTCCGTCCTGCATTGTGCAGGATGTTCAG +
Preference number: 4 (lower is better)
Translates to: PDPERPGTRPGN*GSPSCIVQDVQ
Trigger: CTGAACATCCTGCACAATGCAGGACGGACTCCCCAAATTACCTGGCCTTGTCCCAGGCCTTTCAGGATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGAGACCAGCAGATAGCTaGGCTACATCCCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAERPADS*ATSPSS
Trigger: TGAGCTTGGGGATGTAGCTCAGCTATCTGCTGGTCT...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATGCTCAGGGCTGGCACTaGGAGGCTACTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNAQGWH*EATGDS
Trigger: ACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGC...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTTACGAGAGTGCCAAATaGCATCTTCCCTCCACCCTG +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETYESAK*HLPSTL
Trigger: CAGGGTGGAGGGAAGATGTCATTTGGCACTCTCGTA...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCTCCCAAGTCCCTGTCTaGTGCGGGGCAGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCSQVPV*CGAAAR
Trigger: CCTGGCTGCTGCCCCGCATCAGACAGGGACTTGGGA...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTATGCCCCACAGCAAGTaGCAAGGGGAAGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPMPHSK*QGEVMR
Trigger: TCTCATCACTTCCCCTTGTCACTTGCTGTGGGGCAT...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAAGGTGGTTCCCCTCTTaGAAGTTCAATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: WQCMGSCAPISASVSQGTRWFPS*KFNSCY
Trigger: ATAACAGCTATTGAACTTGCAAGAGGGGAACCACCT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCATCAGCAACCTCCAACTaGATCATCTCGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAASATSN*IISVSK
Trigger: CTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGA...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTAACAGACACACTGGCTaGCTGCCTAGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPNRHTG*LPSKHR
Trigger: CCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGCTCATCTTTGACTTATaGCGCCGGCCTCACGTAAGG +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVLIFDL*RRPHVR
Trigger: CCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAG...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGATGATACAGTCCCTGTaGTTAAGAACATGCCCTATT +
Preference number: 4 (lower is better)
Translates to: KTQELPATQSTALVSQRLMIQSL*LRTCPI
Trigger: AATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTAGCTTTATTGGCCCCTaGATGATACAGTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLSFIGP*MIQSLC
Trigger: GCACAGGGACTGTATCATGCAGGGGCCAATAAAGCT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCAGAAATCCCCCTCATGATCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCATCCAGAATGGGGTaGCCACGAAGGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PRNPPHDHRVSASFGRCQPSRMG*PRRCSF
Trigger: AAAGGAACACCTTCGTGGGCACCCCATTCTGGATGG...CTGACACCTCCCAAAGCTGGCTGAGACTCTGTGATCATGAGGGGGATTTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATTCTGCCTTTAGGTTCTaGATGCCGGGCAGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNSAFRF*MPGRPD
Trigger: GTCGGGCCTGCCCGGCATGCAGAACCTAAAGGCAGA...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCTACCTCTGGAGCCGCTaGACGAGCTGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSYLWSR*TSWATM
Trigger: CATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGGTA...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR GCA 90 bp GGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTGGGGGTGGATCGTCCTTCAATTaGCTCAAAATTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GHLKMNCQGSSTPGPPGGGSSFN*LKIEGS
Trigger: GCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCC...ACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACTGGCCACCCACTAGATaGCCGCAGCAACCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHWPPTR*PQQPLS
Trigger: ACTGAGGGGTTGCTGCGGGCATCTAGTGGGTGGCCA...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTCAAAGGGTCCAGCCTTaGAGTCCAGATCCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETQRVQP*SPDPER
Trigger: CCTTTCAGGATCTGGACTGCAAGGCTGGACCCTTTG...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACTACGTGTTCAAGCTaGACTTCAAGTCCCACGTCT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLATTCSS*TSSPTS
Trigger: AGACGTGGGACTTGAAGTGCAGCTTGAACACGTAGT...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTCAATGCATGGGGTCCTaGGCCCCCATTTCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: VPGTCRYSYILLQLWFETQCMGS*APISAS
Trigger: CGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTG...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAACAGCTCGGAATGAGGTaGTTCCCCTCTTGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQQLGMR*FPSCKF
Trigger: GAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTG...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCTTCCCTCCGCACGCCTaGCTCTTCTCCTTCAACTTA +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSFPPHA*LFSFNL
Trigger: TAAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAA...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376554.8
CDS-3UTR CCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCATGCAGGCCTGGAAGTaGCGACACAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCMQAWK*RHKSQL
Trigger: AAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCAT...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCACCCGTCTCAAAGGCTaGGCCTGGCTACAGACCAGC +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPTRLKG*AWLQTS
Trigger: GCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGT...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CATGATCACAGAGTCTCAGCCAGCTTTGGGAGGTGTCAGCCTGGACACCTGAAGTGGGAGGTGTCAGCCTaGACACCTGAAGATGAACTG +
Preference number: 4 (lower is better)
Translates to: HDHRVSASFGRCQPGHLKWEVSA*TPEDEL
Trigger: CAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCA...CTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTCTGTGATCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCTTCCCGTGTTGCAGGTaGATGGAAGTGATCCGCAGT +
Preference number: 4 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCFPCCR*MEVIRS
Trigger: ACTGCGGATCACTTCCATCCACCTGCAACACGGGAA...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTACTGAGCTCGAGAGCTaGGTTGAGAGCTGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPTELES*VESWVD
Trigger: ATCAACCCAGCTCTCAACCCAGCTCTCGAGCTCAGT...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTGTGAGACTGCCTACATaGTGTAATGGCAGGGACTGC +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETVRLPT*CNGRDC
Trigger: GCAGTCCCTGCCATTACACCATGTAGGCAGTCTCAC...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTGGGTGGCAGAAGCTGTaGGTGGTGTTCACAAACTTC +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETGWQKL*VVFTNF
Trigger: GAAGTTTGTGAACACCACCCACAGCTTCTGCCACCC...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAATGTTTGGAGGTAGCATaGACACAGGTGCCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQCLEVA*TQVPVP
Trigger: AGGGACAGGCACCTGTGTCCATGCTACCTCCAAACA...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp ACCCCACGTGTTGAGTCACAAAGAGTCTCTTGTGTATaGATGGCCGGACACACTCGTTTCCGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TPRVESQRVSCV*MAGHTRFRSGC
Trigger: GCAGCCACTGCGGAAACGAGTGTGTCCGGCCATCAATACACAAGAGACTCTTTGTGACTCAACACGTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp CCCACCAAAGTGTCAGGAGTCCGTCCAAACAAAAGGTaGACTAACTGGCGTTCCCGTGTTGCAGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: PTKVSGVRPNKR*TNWRSRVAGGW
Trigger: CCATCCACCTGCAACACGGGAACGCCAGTTAGTCAACCTTTTGTTTGGACGGACTCCTGACACTTTGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTGACAAAACTCATCTTTaGCTTATGCCGCCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPDKTHL*LMPPAS
Trigger: TGAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTC...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTC +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAQTQSV*FARTKL
Trigger: GAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACGGTGGTTCTGACCTGTaGCCAGCACCTCTGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHGGSDL*PAPLLP
Trigger: AGGAAGCAGAGGTGCTGGTCACAGGTCAGAACCACC...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTGGACACTGGTGGTTCTaGCCTGTGACCAGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VPGTCRYSYILLQLWFETGHWWF*PVTSTS
Trigger: AGAGGTGCTGGTCACAGGTCAGAACCACCAGTGTCC...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCAGTCCCCAGAATCACTaGCCCCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSSPQNH*PPRLGH
Trigger: ATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACT...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp AAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTAGTCCCCAGAATCACTaGCCCCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KGTSRVQNFFMYCQVGRSSPQNH*PPRLGH
Trigger: ATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACT...ACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCTCAGCAACCTCCAACTaGATCATCTCGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSSATSN*IISVSK
Trigger: CTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGA...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAGTAAATCAGAAAAGCTaGTGTCCGCCCTGGCTCACT +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQVNQKS*CPPWLT
Trigger: AGTGAGCCAGGGCGGACAGCAGCTTTTCTGATTTAC...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAGATTTGTCTGGCGACTaGAGAGACTCCCCGTTCATA +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQDLSGD*RDSPFI
Trigger: TATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATC...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCTGTGCTTAAGAACATaGCCTATTAGGTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLALCLRT*PIRSLC
Trigger: GCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCCTCTGTGCCCTGGAGCTaGCCTGGGGAAATCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLCTVRWDAVSGKTQKSPSVPWS*PGEIKS
Trigger: TGACTTGATTTCCCCAGGGCAGCTCCAGGGCACAGA...GGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCCGCACCATAGCACCTaGCCACCTGAGAACCAGGAA +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPPHHST*PPENQE
Trigger: TTCCTGGTTCTCAGGTGGGCAGGTGCTATGGTGCGG...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTCCTCAAAACGAGTGCTaGTCTGAGCTTGTTGGGATG +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETPQNEC*SELVGM
Trigger: CATCCCAACAAGCTCAGAGCAGCACTCGTTTTGAGG...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTCTTAGAGAGTATCTCTaGAGCCGCTGCACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVLREYL*SRCTSW
Trigger: CCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAG...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCTCTTAATGCAGGCCTaGAAGTGGCGACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAELLMQA*KWRHKS
Trigger: GCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTTTCTTGAGCTTTATTaGCCCCTGCATGATACAGTC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLFLELY*PLHDTV
Trigger: GACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CCAAATAGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTCACGCCTGGTCCTCCTaGGGGTGTGGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: PNSKRDLTCAKLLYVLSGHAWSS*GCGGQP
Trigger: GGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTG...ACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCTATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp GCCAGCTTTGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCTTATGTACTGTCAGGTaGGACGCAGTCTCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: ASFGRCQPGHLKMNCQGSLCTVR*DAVSGK
Trigger: CTTTCCTGAGACTGCGTCCCACCTGACAGTACATAA...GCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCAAAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp AGTCTCAGGAAAGACCCAGAAATCCCCCTCATGATCACAGAGTCTCAGCCAGCTGCCCTGGAGCTGCCCTaGGGAAATCAAGTCACGTAT +
Preference number: 4 (lower is better)
Translates to: SLRKDPEIPLMITESQPAALELP*GNQVTY
Trigger: ATACGTGACTTGATTTCCCCAGGGCAGCTCCAGGGC...AGCTGGCTGAGACTCTGTGATCATGAGGGGGATTTCTGGGTCTTTCCTGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCGGGGCTTGGTTCCCATaGATACTCCTCTGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSGAWFP*ILLWSR
Trigger: GCGGCTCCAGAGGAGTATCCATGGGAACCAAGCCCC...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTTCACCGTCCTGTGAGTaGTGTACACAATGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLSPSCE*CTQWED
Trigger: ATCTTCCCATTGTGTACACCACTCACAGGACGGTGA...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATAGTCCTGGCATCCGCTaGGGGCGCTGTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNSPGIR*GRCSLA
Trigger: AGCTAAAGAACAGCGCCCCCAGCGGATGCCAGGACT...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTTCTCATGGCAGAAAGTaGGGTCCCAACTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVSHGRK*GPNFPA
Trigger: CGCAGGGAAGTTGGGACCCCACTTTCTGCCATGAGA...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGAGTCAGCGAGTGAGATaGCCCCACCCTTCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMSQRVR*PHPSLP
Trigger: TGGCAGGGAAGGGTGGGGCCATCTCACTCGCTGACT...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp AGTGGCAGATTACCAACCAGGCGGCCTGACTTCACCTaGTGTTTCTGTAAGCGATGCCCACCAAAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: SGRLPTRRPDFT*CFCKRCPPKCQ
Trigger: CTGACACTTTGGTGGGCATCGCTTACAGAAACACAAGGTGAAGTCAGGCCGCCTGGTTGGTAATCTGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGAGGTGCCCTGTCCTCTaGAGAGTCACATTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTRCPVL*RVTFQG
Trigger: TCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCT...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGCTCAGGGCTGGCACTaGGAGGCTACTGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCAQGWH*EATGDS
Trigger: ACTGTCACCAGTAGCCTCTCAGTGCCAGCCCTGAGC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp CTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCCTGGAGGCTTCCAGACATaGCACACACAGCTAACACAG +
Preference number: 4 (lower is better)
Translates to: LYVLSGGTQSQERPRNPPGGFQT*HTQLTQ
Trigger: CTGTGTTAGCTGTGTGTGTCATGTCTGGAAGCCTCC...AGGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR TCA 90 bp GGGAATGGGAAACGTGGATCAGTTCAACACATACAAGCCACACACTCTGTGCCCAAACTGTCACCCCACTaGGTCCTCACCCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: GNGKRGSVQHIQATHSVPKLSPH*VLTHSA
Trigger: TGCACTATGGGTGAGGACTCAGTGGGGTGACAGTTT...GGGCACAGAGTGTGTGGCTTGTATGTGTTGAACTGATCCACGTTTCCCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR GCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGAGTCCCCAGAATCACTaGCCCCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKSPQNH*PPRLGH
Trigger: ATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACT...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATATCTCTGGAGCCGCTaGACGAGCTGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKYLWSR*TSWATM
Trigger: CATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGATA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAAACAGACACACTGGCTaGCTGCCTAGCAAGCATAGG +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTNRHTG*LPSKHR
Trigger: CCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATGCAAGAAGTGGCCAGTaGACCCCAAACCACACTGGT +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNARSGQ*TPNHTG
Trigger: ACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGC...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAGTCCCAGCCCAAGTaGAGGTCTCTCCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: CKTSLCTVRWDAVSGKTQKSQPK*RSLLPQ
Trigger: CTGGGGAAGGAGAGACCTGCACTTGGGCTGGGACTT...CTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR GCA 90 bp GGCTCTTCACAGGACAGTAGGCAGCCCCTTCAATCACTTCCAAATAGCAAAAGGAAACGCCTGCACTTGTaGCAGATGGCAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSSQDSRQPLQSLPNSKRKRLHL*QMAVRR
Trigger: CCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTT...CCTTTTGCTATTTGGAAGTGATTGAAGGGGCTGCCTACTGTCCTGTGAAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCTGTGACCAGCACCTCTaGTTCCTGTGTGCCCTCAAG +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPCDQHL*FLCALK
Trigger: CTTGAGGGCACACAGGAAGCAGAGGTGCTGGTCACA...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTAAACAAACAGCAACTTaGAAACGGACGAAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLKQTAT*KRTKSL
Trigger: CAGGCTCTTCGTCCGTTTGCAAGTTGCTGTTTGTTT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCAACCTACTTCTTGGTaGAAGTTGACCAAATCGTTT +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLQPTSW*KLTKSF
Trigger: AAACGATTTGGTCAACTTGCACCAAGAAGTAGGTTG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTCGTTTCCGCAGTGGCTaGTTTCCTGGAAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVRFRSG*FPGRRF
Trigger: GAAACGTCTTCCAGGAAAGCAGCCACTGCGGAAACG...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATCTGGCGTTCCCGTGTTaGAGGTGGATGGAAGTGATC +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNLAFPC*RWMEVI
Trigger: GATCACTTCCATCCACCTGCAACACGGGAACGCCAG...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGACAGTGGGCGATAACTaGACCACTGAACTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAETVGDN*TTELQY
Trigger: ATACTGGAGTTCAGTGGTGCAGTTATCGCCCACTGT...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTATTTGGGCGTGGTGGTaGAAGCCTGTAGTCCCATCT +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVIWAWW*KPVVPS
Trigger: AGATGGGACTACAGGCTTGCACCACCACGCCCAAAT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTTCTCACAGGCCTCCTTaGCTTTCAGAATCAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPSHRPP*LSESVV
Trigger: GACAACTGATTCTGAAAGGCAAGGAGGCCTGTGAGA...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATCCAGTGCGTCAGGCCTaGTCAGAGTTGTTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNPVRQA*SELFGG
Trigger: ACCTCCAAACAACTCTGAGCAGGCCTGACGCACTGG...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGGCCTTTACAAGGTGGTaGAACTGCTTTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVAFTRW*NCFESL
Trigger: CAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGC...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp TATCAAAGGAGGGAGGGATCGTCCTTCAATTGCCTCAAAATTGAAGGCAGCCAATGGGTGTCTGTCAGCTaGCCAGCCACGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: YQRREGSSFNCLKIEGSQWVSVS*PATPKS
Trigger: GGACTTTGGCGTGGCTGGCCAGCTGACAGACACCCA...TTGGCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCCCTCCCTCCTTTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CCA 90 bp TGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGGAATGGGAAACGTaGATCAGTTCAACACATACA +
Preference number: 4 (lower is better)
Translates to: WEVSAWTPEDELSRQQHAWEWET*ISSTHT
Trigger: TGTATGTGTTGAACTGATCCACGTTTCCCATTCCCA...GGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp CCCGAGTTCAGAAGCATAAACGTGAAGTATCAGAACTGTGGTTTTCTCCTGCTGCCATGGATACTCCTCTaGAGCCGCTGCACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PEFRSINVKYQNCGFLLLPWILL*SRCTSW
Trigger: CCAGCTCGTGCAGCGGCTCCAGAGGAGTATCCATGG...CAGCAGGAGAAAACCACAGTTCTGATACTTCACGTTTATGCTTCTGAACTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTTCTGACTGGTGTAGCTaGAAACAAACAGCAACTTGC +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLSDWCS*KQTATC
Trigger: GCAAGTTGCTGTTTGTTTCCAGCTACACCAGTCAGA...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAACCTGCTGGCAATGCATaGGGTCCTGCGCCCCCATTT +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKPAGNA*GPAPPF
Trigger: AAATGGGGGCGCAGGACCCCATGCATTGCCAGCAGG...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGTCAGCTTCCGCCTGCTaGCAATGCATGGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKSASAC*QCMGSC
Trigger: GCAGGACCCCATGCATTGCCAGCAGGCGGAAGCTGA...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGAAACCCGTGTGTCATTaGTCAGCACCATTTGTGGTA +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVKPVCH*SAPFVV
Trigger: TACCACAAATGGTGCTGATCAATGACACACGGGTTT...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAGTCCAAACAAAAGGTTaGCTAACTGGCGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTVQTKG*LTGVPV
Trigger: CACGGGAACGCCAGTTAGTCAACCTTTTGTTTGGAC...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCTCCTCAGCAATATGCTaGGCACCTCCTAAACAACAT +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSSSAIC*APPKQH
Trigger: ATGTTGTTTAGGAGGTGCTCAGCATATTGCTGAGGA...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGGAGTCGTCATGGCTCTaGTCGGCCTTCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: SKRDLTCAKLLYVLSGGTESSWL*SAFHLL
Trigger: CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTC...CGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCCAGTCAACAGCTGCTaGACGAACCCTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKPVNSC*TNPPTP
Trigger: TGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCTCATCTTTGACTTATaGCGCCGGCCTCACGTAAGG +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPLIFDL*RRPHVR
Trigger: CCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAG...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATCTCATCTTTGACTTATaGCGCCGGCCTCACGTAAGG +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNLIFDL*RRPHVR
Trigger: CCTTACGTGAGGCCGGCGGCATAAGTCAAAGATGAG...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCCCGACAGGAAATGCTaGCAGTCAACTCTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAEPDRKC*QSTLKE
Trigger: TTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGTCCCCCGACAGGAAATaGTGCCAGTCAACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTSPDRK*CQSTLK
Trigger: TTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGA...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLADKEGR*TSKKIR
Trigger: TCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATC...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCAGGAAAGGTACAAAATaGTACATACAGAACCAAACC +
Preference number: 4 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLRKGTK*YIQNQT
Trigger: GGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCCT...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCTGTGCTTAAGAACATaGCCTATTAGGTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAELCLRT*PIRSLC
Trigger: GCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCCAGCACACATCCACTaGCTCCAAACGCCTGCACTT +
Preference number: 4 (lower is better)
Translates to: SKRDLTCAKLLYVLSGGTPAHIH*LQTPAL
Trigger: AAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGG...CGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp GAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTGGAAGGGACCTCACGTGTaGAAAACTTCTTTATGTACT +
Preference number: 4 (lower is better)
Translates to: EVSAWTPEDELSRQQHAWKGPHV*KTSLCT
Trigger: AGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTT...CCAGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAAAAGCCGAGATCCAGTaGAATACCTGGACTGTCACC +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTKAEIQ*NTWTVT
Trigger: GGTGACAGTCCAGGTATTGCACTGGATCTCGGCTTT...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCAGCTCGGAATGAGGTaGTTCCCCTCTTGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHQLGMR*FPSCKF
Trigger: GAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp TATCAAAGGAGGGAGGGATCGTCCTTCAATTGCCTCAAAATTGAAGGCAGCCAACCTCCGCTAGGTAGATaGCCCCTCGCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YQRREGSSFNCLKIEGSQPPLGR*PLAALQ
Trigger: TTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGG...TTGGCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCCCTCCCTCCTTTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCCTCAAAGGCTGGGCCTaGCTACAGACCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCLKGWA*LQTSSS
Trigger: ACTGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAG...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCTTCCCTCCGCACGCCTaGCTCTTCTCCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSFPPHA*LFSFNS
Trigger: AGAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAA...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp GGCTCTTCACAGGACAGTAGGCAGCCCCTTCAATCACTTCCAAATAGCAAAAGGCAGTCAGGAGGGGCTTaGTTCCCATGGATACTCCTA +
Preference number: 4 (lower is better)
Translates to: GSSQDSRQPLQSLPNSKRQSGGA*FPWILL
Trigger: TAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTG...CCTTTTGCTATTTGGAAGTGATTGAAGGGGCTGCCTACTGTCCTGTGAAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp AGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTCAGGAGGGGCTTaGTTCCCATGGATACTCCTC +
Preference number: 4 (lower is better)
Translates to: SKRDLTCAKLLYVLSGGTQSGGA*FPWILL
Trigger: GAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTG...CGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CCA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAGAGTGGTGTACACAATaGGAAGATAATAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQEWCTQ*EDNKPW
Trigger: CCACGGCTTATTATCTTCCCATTGTGTACACCACTC...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGTGTAGTCCCATCTCCTaGGAGGCCAAGGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKCSPIS*EAKAGG
Trigger: TCCTCCAGCCTTGGCCTCCCAGGAGATGGGACTACA...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTAAAAACAGCAACGGGTaGCAGAAGCTGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VPGTCRYSYILLQLWFETKNSNG*QKLWVV
Trigger: CACCACCCACAGCTTCTGCCACCCGTTGCTGTTTTT...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTTCAGAATCAGTTGTCTaGAAACCTGCTGAGGAAATT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLASESVV*KPAEEI
Trigger: AATTTCCTCAGCAGGTTTCCAGACAACTGATTCTGA...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATAGGTGCCCTGTCCTCTaGAGAGTCACATTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNRCPVL*RVTFQG
Trigger: TCCTTGAAATGTGACTCTTCAGAGGACAGGGCACCT...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGACTGTCACCGTCCTGTaGGTGGTGTACACAATGGGA +
Preference number: 4 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMTVTVL*VVYTMG
Trigger: TCCCATTGTGTACACCACTCACAGGACGGTGACAGT...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGATTTTGCTATTATTGTaGCAAAGGGTCCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVILLLL*QRVQPC
Trigger: GCAAGGCTGGACCCTTTGTCACAATAATAGCAAAAT...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGCTAAACAACATCACCTaGAAAAGGAACCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMLNNIT*KRNLEE
Trigger: CTCCTCTAGGTTCCTTTTTCAGGTGATGTTGTTTAG...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCAGGTGGTTCCCCTCTTaGAAGTTCAATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSRWFPS*KFNSCY
Trigger: ATAACAGCTATTGAACTTGCAAGAGGGGAACCACCT...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTTGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACAGGTGGTTCCCCTCTTaGAAGTTCAATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LWEVSAWTPEDELSRQQHRWFPS*KFNSCY
Trigger: ATAACAGCTATTGAACTTGCAAGAGGGGAACCACCT...GTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGTACCAGTCAACAGCTaGTGCACGAACCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCVPVNS*CTNPPT
Trigger: AGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTAC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACATCCCCCGACAGGAAATaGTGCCAGTCAACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTSPDRK*CQSTLK
Trigger: TTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGA...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCAGCTTTATTGGCCCCTaGATGATACAGTCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPSFIGP*MIQSLC
Trigger: GCACAGGGACTGTATCATGCAGGGGCCAATAAAGCT...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCTTCTCCTTCAACTCTaGAAACAGAGGAGAAATAAT +
Preference number: 4 (lower is better)
Translates to: GTERLLVTVNPSQRLGLALLLQL*KQRRNN
Trigger: ATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TGGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCCTTCTCCTTCAACTCTaGAAACAGAGGAGAAATAAT +
Preference number: 4 (lower is better)
Translates to: WEVSAWTPEDELSRQQHALLLQL*KQRRNN
Trigger: ATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAG...GGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp ATTTTCACCTATTGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTTCTGCCTTTAGGTTCTaGATGCCGGGCAGGCCCGAC +
Preference number: 4 (lower is better)
Translates to: IFTYWLLHFTKWTSRCLFSAFRF*MPGRPD
Trigger: GTCGGGCCTGCCCGGCATGCAGAACCTAAAGGCAGA...AAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGGACACAGGGAGGGCCTaGCCCCCACTGTTCCCTATG +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKDTGRA*PPLFPM
Trigger: CATAGGGAACAGTGGGGGGCAGGCCCTCCCTGTGTC...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTTACTCGGGAAACGTCTaGCTGTTCTCGATGGTGATG +
Preference number: 4 (lower is better)
Translates to: VPGTCRYSYILLQLWFETYSGNV*LFSMVM
Trigger: CATCACCATCGAGAACAGGCAGACGTTTCCCGAGTA...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGCCCGAGGAGGGAGCTaGCTGGGCTCCCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIARGGS*LGSQVP
Trigger: AGGGACTTGGGAGCCCAGGCAGCTCCCTCCTCGGGC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCACCCCAAACCACACTaGTGTCCACCTCATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKHPKPH*CPPHWQ
Trigger: CTGCCAATGAGGTGGACACCAGTGTGGTTTGGGGTG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTAACGCACCCTCTCTGTaGAGCTCTGACTGGTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTINAPSL*SSDWCS
Trigger: GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTT...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAAGGTTTCCAGTGGCTTTaGCCCCTACTCGGGAAACGT +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKGFQWL*PLLGKR
Trigger: ACGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACC...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGTCCCAACCTACTTCTTaGTGCAAGTTGACCAAATCG +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTSQPTS*CKLTKS
Trigger: CGATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGA...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTATAAAAAGGGAGATTTaGGCGTGGTGGTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVIKREI*AWWCKP
Trigger: AGGCTTGCACCACCACGCCCAAATCTCCCTTTTTAT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp CCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTaGGGGACAAGGCAGTCTCCTCAGCTATTTATTTCT +
Preference number: 4 (lower is better)
Translates to: PSRSHHSLIPGD*GTRQSPQLFIS
Trigger: AGAAATAAATAGCTGAGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTCAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTC +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVQTQSV*FARTKL
Trigger: GAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTG...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTGTGGTGCAACTGCTTTaGGTCTCTGCTGGTGATGTC +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTIVVQLL*VSAGDV
Trigger: GACATCACCAGCAGAGACTCAAAGCAGTTGCACCAC...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGTCCCCAGAATCACTaGCCCCCGAGGCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKSPQNH*PPRLGH
Trigger: ATGGCCAAGCCTCGGGGGGCAGTGATTCTGGGGACT...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTCAGCAACCTCCAACTaGATCATCTCGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMSATSN*IISVSK
Trigger: CTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGA...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACTCCCCCGACAGGAAATaGTGCCAGTCAACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHSPDRK*CQSTLK
Trigger: TTTTAGAGTTGACTGGCAGCATTTCCTGTCGGGGGA...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAEDKEGR*TSKKIR
Trigger: TCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATC...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTACTTCACAAGAGCAATaGAGGGATAAAACTATTGGA +
Preference number: 4 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLTSQEQ*RDKTIG
Trigger: TCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCCTTTAGGTTCTGCATaGCGGGCAGGCCCGACTGCA +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKPLGSA*RAGPTA
Trigger: TGCAGTCGGGCCTGCCCGGCATGCAGAACCTAAAGG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCCTCATGATCACAAGGGACCTCACGTGTaGAAAACTTCTTTATGTACT +
Preference number: 4 (lower is better)
Translates to: LSGGTQSQERPRNPPHDHKGPHV*KTSLCT
Trigger: AGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTT...GTGATCATGAGGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCATTCCTATATCCTCCTaGAACTGTGGTTTGAAACTG +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSIPISS*NCGLKL
Trigger: CAGTTTCAAACCACAGTTGCAGGAGGATATAGGAAT...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGTTTTCACCTATTGGCTaGTGCATTTTACGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVFSPIG*CILRSG
Trigger: TCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAA...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCTGTTTCTGTAAGCGATaGCCACCAAAGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPCFCKR*PPKCQE
Trigger: CTCCTGACACTTTGGTGGGCATCGCTTACAGAAACA...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGTGCTGGCTGTTCCCTTaGTCTTCTGCTGAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKCWLFP*SSAEVA
Trigger: TGCCACTTCAGCAGAAGAGCAAGGGAACAGCCAGCA...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCTGGGGACTTCTCCCTaGAGTCTTCCAAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKLGTSP*SLPKCL
Trigger: GAGACACTTTGGAAGACTCCAGGGAGAAGTCCCCAG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp TATCAAAGGAGGGAGGGATCGTCCTTCAATTGCCTCAAAATTGAAGGCAGCCAATGGGAGGTGTCAGCCTaGACACCTGAAGATGAACTG +
Preference number: 4 (lower is better)
Translates to: YQRREGSSFNCLKIEGSQWEVSA*TPEDEL
Trigger: CAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCCA...TTGGCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCCCTCCCTCCTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp AAAGCAGAGAGCAAAATGCCCAACAAGACAGTAACAATCCTACCCGTTTCTGGTAGTCTCAGCCAGCTTTaGGAGGTGTCAGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: KAESKMPNKTVTILPVSGSLSQL*EVSAWT
Trigger: TGTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACT...ACCAGAAACGGGTAGGATTGTTACTGTCTTGTTGGGCATTTTGCTCTCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp TATCAAAGGAGGGAGGGATCGTCCTTCAATTGCCTCAAAATTGAAGGCAGCCAAAGAGAGATAGGGGCCTaGGAATGGGAAACGTGGATC +
Preference number: 4 (lower is better)
Translates to: YQRREGSSFNCLKIEGSQREIGA*EWETWI
Trigger: GATCCACGTTTCCCATTCCCAGGCCCCTATCTCTCT...TTGGCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCCCTCCCTCCTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp AGGCCAAGAATCAAGTACCAAACTCATCAACTAAGTCCCAGCCCAAGTGCAGGTACGCTGTACTTCTACTaGCCAGCACTGGTACAGATC +
Preference number: 4 (lower is better)
Translates to: RPRIKYQTHQLSPSPSAGTLYFY*PALVQI
Trigger: GATCTGTACCAGTGCTGGCCAGTAGAAGTACAGCGT...ACCTGCACTTGGGCTGGGACTTAGTTGATGAGTTTGGTACTTGATTCTTGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp GTACCAAACTCATCAACTAAGTCCCAGCCCAAGTGCAGGTCTCTCCTTCCCCAGATAAAATTCTGTGTGTaGCCCACGCTGTACTTCTAC +
Preference number: 4 (lower is better)
Translates to: VPNSSTKSQPKCRSLLPQIKFCV*PTLYFY
Trigger: GTAGAAGTACAGCGTGGGCCACACACAGAATTTTAT...CTGGGGAAGGAGAGACCTGCACTTGGGCTGGGACTTAGTTGATGAGTTTGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGGCAGAAGCTGTGGGTaGTGTTCACAAACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCGRSCG*CSQTSA
Trigger: GGCAGAAGTTTGTGAACACCACCCACAGCTTCTGCC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATCAGACTCAATCTGTGTaGTTCGCAAGGACAAAACTC +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNQTQSV*FARTKL
Trigger: GAGTTTTGTCCTTGCGAATCACACAGATTGAGTCTG...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCATCTGAGTGGAGTTTaGGACACACTACACATGAGA +
Preference number: 4 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHHLSGV*DTLHMR
Trigger: TCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGAGTCTCTTGTGTATTaGTGGCCGGACACACTCGTT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCESLVY*WPDTLV
Trigger: AACGAGTGTGTCCGGCCATCAATACACAAGAGACTC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTTTGCTTGGAGATCTCTaGCATAACGTGTCCGGGATG +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTILLGDL*HNVSGM
Trigger: CATCCCGGACACGTTATGTCAGAGATCTCCAAGCAA...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGAAACGAGTGCTGCTCTaGGCTTGTTGGGATGGATCT +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKKRVLL*ACWDGS
Trigger: AGATCCATCCCAACAAGCTCAGAGCAGCACTCGTTT...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp AAACCCGAGTTCAGAAGCATAAACGTGAAGTATCAGAACTGTGGTTTTCTCCTGGAGTCGTCATGGCTCTaGTCGGCCTTCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: KPEFRSINVKYQNCGFLLESSWL*SAFHLL
Trigger: CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTC...CAGGAGAAAACCACAGTTCTGATACTTCACGTTTATGCTTCTGAACTCGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCCAGTCAACAGCTGCTaGACGAACCCTCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKPVNSC*TNPPTP
Trigger: TGGAGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGATTTGTCTGGCGACTaGAGAGACTCCCCGTTCATA +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCDLSGD*RDSPFI
Trigger: TATGAACGGGGAGTCTCTGCAGTCGCCAGACAAATC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ATTTTCACCTATTGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTGCAAGAAGTGGCCAGTaGACCCCAAACCACACTGGT +
Preference number: 4 (lower is better)
Translates to: IFTYWLLHFTKWTSRCLFARSGQ*TPNHTG
Trigger: ACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGC...AAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTACTTCACAAGAGCAATaGAGGGATAAAACTATTGGA +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPTSQEQ*RDKTIG
Trigger: TCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGT...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTAGGAAAGGTACAAAATaGTACATACAGAACCAAACC +
Preference number: 4 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETRKGTK*YIQNQT
Trigger: GGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCCT...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGCTTCTCCTTCAACTCTaGAAACAGAGGAGAAATAAT +
Preference number: 4 (lower is better)
Translates to: LVALRGKGLSMICLATAELLLQL*KQRRNN
Trigger: ATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAG...CTCTGCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGGAAGTGATCCGCAGTaGCACCAGCTCTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIGSDPQ*HQLCLA
Trigger: CGCGAGGCAGAGCTGGTGGCACTGCGGATCACTTCC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCCTCCGCTAGGTAGATaGCCCCTCGCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKPPLGR*PLAALQ
Trigger: TTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CCAAATAGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTTTCCCTCCGCACGCCTaGCTCTTCTCCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: PNSKRDLTCAKLLYVLSGFPPHA*LFSFNS
Trigger: AGAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAA...ACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCTATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp GCCACCACATCCAGCAGAAAACATAAAATTCTGTGTGTGGCCCACGCTGTACTTTCTACTGGCCAGCACTaGTACAGATCAACTTGCCTT +
Preference number: 4 (lower is better)
Translates to: ATTSSRKHKILCVAHAVLSTGQH*YRSTCL
Trigger: AAGGCAAGTTGATCTGTACCAGTGCTGGCCAGTAGA...AAGTACAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGTGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGCTGTGGAGCTCTGACTaGTGTAGCTGGAAACAAACA +
Preference number: 4 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMLWSSD*CSWKQT
Trigger: TGTTTGTTTCCAGCTACACCAGTCAGAGCTCCACAG...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAAAGCACTATGAAATCATaGTACGTAGTCCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKSTMKS*YVVPGT
Trigger: GGTGCCGGGGACTACGTACCATGATTTCATAGTGCT...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTGCGATTCTGTTCTCATaGCAGAAAGTGGGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTIAILFS*QKVGSQ
Trigger: TTGGGACCCCACTTTCTGCCATGAGAACAGAATCGC...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGGGTGCAGCTCGGAATaGGGTGGTTCCCCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIGCSSE*GGSPLA
Trigger: TGCAAGAGGGGAACCACCTCATTCCGAGCTGCACCC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp GAGGTATGTGATGCTAAGTTTGAGAAATCAAAAAGTTTGTGTTCAGGCAAAAGATGCGCCCGCTCCCGCTaGGTTGACCACACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EVCDAKFEKSKSLCSGKRCARSR*VDHTKA
Trigger: AGCTTTGGTGTGGTCAACTCAGCGGGAGCGGGCGCA...TCTTTTGCCTGAACACAAACTTTTTGATTTCTCAAACTTAGCATCACATACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR TCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGAGATACTCGTTTTCTTaGGCTTTATTGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMRYSFS*ALLAPA
Trigger: TGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCT...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGACCAACCAGGCGGCCTaGCTTCACCTTGTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKTNQAA*LHLVFL
Trigger: CAGAAACACAAGGTGAAGTCAGGCCGCCTGGTTGGT...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCAACTCTAGGGAAGACTaGCATTATCATCCACTGAAG +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPNSRED*HYHPLK
Trigger: CTTCAGTGGATGATAATGTCAGTCTTCCCTAGAGTT...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGGAGTCGTCATGGCTCTaGTCGGCCTTCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKESSWL*SAFHLL
Trigger: CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTC...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTATCTCTGGAGCCGCTaGACGAGCTGGGCCACCATG +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIYLWSR*TSWATM
Trigger: CATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGATA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGACACACTGGCTGCCTaGCTAGCAAGCATAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIDTLAA*LASIGP
Trigger: GGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGGCAAGAAGTGGCCAGTaGACCCCAAACCACACTGGT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKARSGQ*TPNHTG
Trigger: ACCAGTGTGGTTTGGGGTGCACTGGCCACTTCTTGC...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCGGCAAAAGCTACAAATaGACTAAGTCCTGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSGKSYK*TKSCGL
Trigger: AAGCCCACAGGACTTAGTGCATTTGTAGCTTTTGCC...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR GCA 90 bp AAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTGGATCGTCCTTCAATTaGCTCAAAATTGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KGTSRVQNFFMYCQVGRSGSSFN*LKIEGS
Trigger: GCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCC...ACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGAACGGACGAAGAGCCTaGCGTGTGTTAATCATTTGC +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKNGRRA*RVLIIC
Trigger: GCAAATGATTAACACACGGCAGGCTCTTCGTCCGTT...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCTACTCGCTCACCATCCCCTCTGAGTCCGAGAACATCCAGAAAGACTACGTGTCAAAGTTGGGATTTTaGTATTATTGTGACAAAGGG +
Preference number: 4 (lower is better)
Translates to: GYSLTIPSESENIQKDYVSKLGF*YYCDKG
Trigger: CCCTTTGTCACAATAATAGCAAAATCCCAACTTTGA...CACGTAGTCTTTCTGGATGTTCTCGGACTCAGAGGGGATGGTGAGCGAGTAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GCATTAAGTGCCTTTACAAGGTGGTGCAACTGCTTTGAGTCTCTGCTGGTGATGTGTAATGGCAGGGACTaGAGACTTCATTTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ALSAFTRWCNCFESLLVMCNGRD*RLHLAK
Trigger: CTTGGCTAAATGAAGTCTGCAGTCCCTGCCATTACA...CATCACCAGCAGAGACTCAAAGCAGTTGCACCACCTTGTAAAGGCACTTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGGACAATCATCCCCTTaGCAGCCTGCCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIGQSSP*QPASAR
Trigger: CCGAGCAGAGGCAGGCTGGCAAGGGGATGATTGTCC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGTGTTCACAAACTTCTaGCTGTTCTTCTACAAATCA +
Preference number: 4 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTVFTNF*LFFYKS
Trigger: TGATTTGTAGAAGAACAGGCAGAAGTTTGTGAACAC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp AATCACTTCCAAATAGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACCCTCCGCTAGGTAGATaGCCCCTCGCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NHFQIAKGTSRVQNFFMYPPLGR*PLAALQ
Trigger: TTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGG...GTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCTATTTGGAAGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCTTAGAGAGTATCTCTaGAGCCGCTGCACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKLREYL*SRCTSW
Trigger: CCAGCTCGTGCAGCGGCTCCAGAGATACTCTCTAAG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CTGGGCTCTCTCTTAATGCAGGCCTGGAAGTGGCGACACAAAAGCCAGCTTCCTAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 4 (lower is better)
Translates to: LGSLLMQAWKWRHKSQLPNRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...AGGAAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAGAGAGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCTTTCTTGAGCTTTATTaGCCCCTGCATGATACAGTC +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPFLELY*PLHDTV
Trigger: GACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAA...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTGGGTGTCTGTCAGCTaGCCAGCCACGCCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIWVSVS*PATPKS
Trigger: GGACTTTGGCGTGGCTGGCCAGCTGACAGACACCCA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376547.7
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGTTCCCTCCGCACGCCTaGCTCTTCTCCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKFPPHA*LFSFNS
Trigger: AGAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAA...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376547.7
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATGAAGATAATAAGCCGTaGTGTTTTGCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNEDNKP*CFAVCL
Trigger: CAGACAGACAGCAAAACACCACGGCTTATTATCTTC...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCATTATTTTCACCTATTaGCTGCTGCATTTTACGAAG +
Preference number: 4 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSIIFTY*LLHFTK
Trigger: CTTCGTAAAATGCAGCAGCCAATAGGTGAAAATAAT...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAACAGTGGCTGCTTTCCTaGAAGACGTTTCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKQWLLS*KTFPFF
Trigger: GAAGAAAGGAAACGTCTTCCAGGAAAGCAGCCACTG...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAAAAAAGGTTGACTAACTaGCGTTCCCGTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKKRLTN*RSRVAG
Trigger: ACCTGCAACACGGGAACGCCAGTTAGTCAACCTTTT...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp TGCAAACGGACGAAGAGCCTGCCGTGTGTTAATCATTaGCCTTACAAGATGTACCAGACGGTTTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: CKRTKSLPCVNH*PYKMYQTVSST
Trigger: AGTACTGGAAACCGTCTGGTACATCTTGTAAGGCAAATGATTAACACACGGCAGGCTCTTCGTCCGTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp GTGCTTCTCACAGGCCTCCTTGCCTTTCAGAATCAGTaGTCTGGAAACCTGCTGAGGAAATTCAAAAACAGC +
Preference number: 4 (lower is better)
Translates to: VLLTGLLAFQNQ*SGNLLRKFKNS
Trigger: GCTGTTTTTGAATTTCCTCAGCAGGTTTCCAGACAACTGATTCTGAAAGGCAAGGAGGCCTGTGAGAAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp TGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGCAATTGCCTCAAAATTaGAGGCAGCCAAGTAGATCA +
Preference number: 4 (lower is better)
Translates to: CKTSLCTVRWDAVSGKTQQLPQN*RQPSRS
Trigger: TGATCTACTTGGCTGCCTTCAATTTTGAGGCAATTG...CTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR TCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTTTGCAGTCCAGATCCTaGAAGGCCTGGGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPLQSRS*KAWDKA
Trigger: GGCCTTGTCCCAGGCCTTTCAGGATCTGGACTGCAA...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTCTGCACGGTGTTGGCTaGGGCCCTAGACATCTTGCT +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPLHGVG*GPRHLA
Trigger: AGCAAGATGTCTAGGGCCTCAGCCAACACCGTGCAG...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGGACATTATCATCCACTaGAGGACAACTTCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKDIIIH*RTTSAL
Trigger: TAGGGCAGAAGTTGTCCTTCAGTGGATGATAATGTC...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTCCCGACAGGAAATGCTaGCAGTCAACTCTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTIPDRKC*QSTLKE
Trigger: TTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGG...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCAGCTCGGAATGAGGTaGTTCCCCTCTTGCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKQLGMR*FPSCKF
Trigger: GAACTTGCAAGAGGGGAACCACCTCATTCCGAGCTG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTCCTCCGCTAGGTAGATaGCCCCTCGCAGCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIPPLGR*PLAALQ
Trigger: TTGAAGAGCTGCGAGGGGCCATCTACCTAGCGGAGG...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGATGCAGGCCTGGAAGTaGCGACACAAAAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKMQAWK*RHKSQL
Trigger: AAGCTGGCTTTTGTGTCGCCACTTCCAGGCCTGCAT...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTTCACCCCTCTCTGCTaGCTCTCTGCCCTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIFTPLC*LSALGN
Trigger: GTTGCCAAGGGCAGAGAGCCAGCAGAGAGGGGTGAA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS-3UTR CCA 90 bp CTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCCTATAGTTACACACATCTaGCTAAGAACGATCATTCTC +
Preference number: 4 (lower is better)
Translates to: LYVLSGGTQSQERPRNPPIVTHI*LRTIIL
Trigger: GAGAATGATCGTTCTTAGCCAGATGTGTGTAACTAT...AGGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp ACATCCAGCAGAAAACATAAAATTCTGTGTGTGGCCCACGCTGTACTTCTACTGGGGGCTTGGTTCCCATaGATACTCCTACAACAAGTT +
Preference number: 4 (lower is better)
Translates to: TSSRKHKILCVAHAVLLLGAWFP*ILLQQV
Trigger: AACTTGTTGTAGGAGTATCCATGGGAACCAAGCCCC...CAGTAGAAGTACAGCGTGGGCCACACACAGAATTTTATGTTTTCTGCTGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000418038.5
3UTR CAA 72 bp CACATGAGACACACAATGATGCAGATACTCGTTTTCTaGAGCTTTATTGGCCCCTGCATGATACAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HMRHTMMQILVF*SFIGPCMIQSL
Trigger: CAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTGCATCATTGTGTGTCTCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp TCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATaGATCAGCACCATTTGTGGTATGTTCCGTGATGAG +
Preference number: 4 (lower is better)
Translates to: SVCVTSMKTRVS*ISTICGMFRDE
Trigger: CTCATCACGGAACATACCACAAATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp GGTGTACACAATGGGAAGATAATAAGCCGTGGTGTTTaGCTGTCTGTCTGTGTCACAAGCATGAAAACCCGT +
Preference number: 4 (lower is better)
Translates to: GVHNGKIISRGV*LSVCVTSMKTR
Trigger: ACGGGTTTTCATGCTTGTGACACAGACAGACAGCAAAACACCACGGCTTATTATCTTCCCATTGTGTACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTGTCTGTCTGTGTCACAAGCATGAAAACCCGTGTGTCATTGATCAGCACCATTCTGCAATTCATATTTTaGATAGAGATCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSVCVTSMKTRVSLISTILQFIF*IEILGL
Trigger: GAGGCCCAGGATCTCTATTCAAAATATGAATTGCAG...AATGGTGCTGATCAATGACACACGGGTTTTCATGCTTGTGACACAGACAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTGAGTCGTCATGGCTCTaGTCGGCCTTCCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPESSWL*SAFHLL
Trigger: CAAGAGATGGAAGGCCGAGCAGAGCCATGACGACTC...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGTACCAGTCAACAGCTaGTGCACGAACCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIVPVNS*CTNPPT
Trigger: AGTGGGAGGGTTCGTGCAGCAGCTGTTGACTGGTAC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCAGGAAAGGTACAAAATaGTACATACAGAACCAAACC +
Preference number: 4 (lower is better)
Translates to: NSPGENVHRGELSNSIKPRKGTK*YIQNQT
Trigger: GGTTTGGTTCTGTATGTAGCATTTTGTACCTTTCCT...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTCGTGTGTTAATCATTTaGCTTACAAGATGTACCAGA +
Preference number: 4 (lower is better)
Translates to: VPGTCRYSYILLQLWFETRVLII*LTRCTR
Trigger: TCTGGTACATCTTGTAAGGCAAATGATTAACACACG...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAATCACCTATTGGCTGCTaGATTTTACGAAGTGGACTT +
Preference number: 4 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKSPIGC*ILRSGL
Trigger: AAGTCCACTTCGTAAAATGCAGCAGCCAATAGGTGA...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTGAGATCCTGGGCCTCTaGAAATTGCATCCCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPEILGL*KLHPQA
Trigger: GGCTTGGGGATGCAATTTGCAGAGGCCCAGGATCTC...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTCTGAAGGACAACTTCTaGCCTAGGAAGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPLKDNF*PRKGHL
Trigger: CAGGTGGCCCTTCCTAGGGCAGAAGTTGTCCTTCAG...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGAAATGAGCCACCAGTaGGTCAGGCCTGCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIEMSHQ*VRPAQS
Trigger: ACTCTGAGCAGGCCTGACGCACTGGTGGCTCATTTC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 4 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVNRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCTCTTAATGCAGGCCTaGAAGTGGCGACACAAAAGC +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKLLMQA*KWRHKS
Trigger: GCTTTTGTGTCGCCACTTCCAGGCCTGCATTAAGAG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCTTTCTTGAGCTTTATTaGCCCCTGCATGATACAGTC +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCFLELY*PLHDTV
Trigger: GACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAA...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTTCCCTCCGCACGCCTaGCTCTTCTCCTTCAACTCT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIFPPHA*LFSFNS
Trigger: AGAGTTGAAGGAGAAGAGCCAGGCGTGCGGAGGGAA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376547.7
ENST00000397517.6
ENST00000539966.6
3UTR CAA 72 bp GGGCGCTGTTCTTTAGCTAGTGCCAGTATTAAAACATaGTCATTACGAGAGTGCCAAATGACATCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: GRCSLASASIKT*SLRECQMTSSL
Trigger: GAGGGAAGATGTCATTTGGCACTCTCGTAATGACAATGTTTTAATACTGGCACTAGCTAAAGAACAGCGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp ACAGTCAGGCCTAAGACTGTTCCTGCAATTCATATTTaGAATAGAGATCCTGGGCCTCTGCAAATTGCATCC +
Preference number: 4 (lower is better)
Translates to: TVRPKTVPAIHI*NRDPGPLQIAS
Trigger: GGATGCAATTTGCAGAGGCCCAGGATCTCTATTCAAAATATGAATTGCAGGAACAGTCTTAGGCCTGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTCCTCCACCCTGCCCCTaGAAAACAGTACACACACAT +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPPPPCP*KTVHTH
Trigger: ATGTGTGTGTACTGTTTTTCAGGGGCAGGGTGGAGG...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCATGATACAGTCCCTGTaGTTAAGAACATGCCCTATT +
Preference number: 4 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCMIQSL*LRTCPI
Trigger: AATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTCCATCCAGAATGGGGTaGCCACGAAGGTGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIPSRMG*PRRCSF
Trigger: AAAGGAACACCTTCGTGGGCACCCCATTCTGGATGG...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376547.7
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTTGGGCCTCTGCAAATTaGATCCCCAAGCCGACTACT +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPWASAN*IPKPTT
Trigger: AGTAGTCGGCTTGGGGATGCAATTTGCAGAGGCCCA...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATAATAGACTCAAGTTATaGCCTGTCGAATATTTACTC +
Preference number: 4 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNNRLKL*PVEYLL
Trigger: GAGTAAATATTCGACAGGCCATAACTTGAGTCTATT...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCAGGATGAGGTAGAGTaGCCCTCCTTTTATTCAAGG +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKQDEVE*PSFYSR
Trigger: CCTTGAATAAAAGGAGGGCCACTCTACCTCATCCTG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS-3UTR CCA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCAGAACGATCATTCTCTaGCCAATAATTAAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSRTIIL*PIIKLH
Trigger: ATGCAGCTTAATTATTGGCCAGAGAATGATCGTTCT...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp AGGCCAAGAATCAAGTACCAAACTCATCAACTAAGTCCCAGCCCAAGTGCAGGTAATTTCAGGCAATTCTaGACAGTGTGGAAAGTATTG +
Preference number: 4 (lower is better)
Translates to: RPRIKYQTHQLSPSPSAGNFRQF*TVWKVL
Trigger: CAATACTTTCCACACTGTCCAGAATTGCCTGAAATT...ACCTGCACTTGGGCTGGGACTTAGTTGATGAGTTTGGTACTTGATTCTTGGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp AATCACTTCCAAATAGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACATAGGGGCCTGGGAATaGGAAACGTGGATCAGTTCA +
Preference number: 4 (lower is better)
Translates to: NHFQIAKGTSRVQNFFMYIGAWE*ETWISS
Trigger: TGAACTGATCCACGTTTCCCATTCCCAGGCCCCTAT...GTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCTATTTGGAAGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTCGATGGTGATGGGGTaGCTGCCATTCCCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALISMVMG*LPFPWF
Trigger: AAACCAAGGGAATGGCAGCCACCCCATCACCATCGA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGCTCTTCTGCTGAAGTaGCAGATTACCAACCAGGCG +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIALLLK*QITNQA
Trigger: CGCCTGGTTGGTAATCTGCCACTTCAGCAGAAGAGC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp CAGCCACTTCACAAGAGCAATGCAGGGATAAAACTATaGGATAAGGAAGGCAGATGCACTTCCAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: QPLHKSNAGIKL*DKEGRCTSKKI
Trigger: GATTTTCTTGGAAGTGCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGTGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
3UTR CAA 72 bp AATACTAGTGTGGGTAACAGTCCATCTGAGTGGAGTTaGAGACACACTACACATGAGACACACAATGATGCA +
Preference number: 4 (lower is better)
Translates to: NTSVGNSPSEWS*RHTTHETHNDA
Trigger: TGCATCATTGTGTGTCTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGGACTGTTACCCACACTAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
3UTR CAA 72 bp TCCAGACTTTACCAAATGGGACAGCATTGCACCCATTaGAGAAGCACCGGTAGAGAGCAAATACACAAATAT +
Preference number: 4 (lower is better)
Translates to: SRLYQMGQHCTH*RSTGREQIHKY
Trigger: ATATTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCATTTGGTAAAGTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR TCA 90 bp AAACCCGAGTTCAGAAGCATAAACGTGAAGTATCAGAACTGTGGTTTTCTCCTGCAATTGCCTCAAAATTaGAGGCAGCCAAGTAGATCA +
Preference number: 4 (lower is better)
Translates to: KPEFRSINVKYQNCGFLLQLPQN*RQPSRS
Trigger: TGATCTACTTGGCTGCCTTCAATTTTGAGGCAATTG...CAGGAGAAAACCACAGTTCTGATACTTCACGTTTATGCTTCTGAACTCGGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp TATCAAAGGAGGGAGGGATCGTCCTTCAATTGCCTCAAAATTGAAGGCAGCCAACTTCTCCTTCAACTCTaGAAACAGAGGAGAAATAAT +
Preference number: 4 (lower is better)
Translates to: YQRREGSSFNCLKIEGSQLLLQL*KQRRNN
Trigger: ATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAG...TTGGCTGCCTTCAATTTTGAGGCAATTGAAGGACGATCCCTCCCTCCTTTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGGTGGTTCCCCTCTTaGAAGTTCAATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKRWFPS*KFNSCY
Trigger: ATAACAGCTATTGAACTTGCAAGAGGGGAACCACCT...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTCTGCCCTTGGCAACATaGTCCAGTTTCTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALILPLAT*SSFSHL
Trigger: TAAATGGGAGAAACTGGAGCATGTTGCCAAGGGCAG...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS-3UTR CCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCTGCATTTTACGAAGTaGACTTCCCGGTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKLHFTK*TSRCLF
Trigger: AAACAAACACCGGGAAGTCCACTTCGTAAAATGCAG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTCCCGACAGGAAATGCTaGCAGTCAACTCTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIPDRKC*QSTLKE
Trigger: TTCTTTTAGAGTTGACTGGCAGCATTTCCTGTCGGG...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGGATAAGGAAGGCAGATaGACTTCCAAGAAAATCAGA +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKDKEGR*TSKKIR
Trigger: TCTGATTTTCTTGGAAGTGCATCTGCCTTCCTTATC...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGTTGCAATACACTCAGTaGAGCCTTAAGCAAATGAGA +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKLQYTQ*SLKQMR
Trigger: TCTCATTTGCTTAAGGCTGCACTGAGTGTATTGCAA...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTAGGTGGTTCCCCTCTTaGAAGTTCAATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIRWFPS*KFNSCY
Trigger: ATAACAGCTATTGAACTTGCAAGAGGGGAACCACCT...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCTTCTCCTTCAACTCTaGAAACAGAGGAGAAATAAT +
Preference number: 4 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKLLLQL*KQRRNN
Trigger: ATTATTTCTCCTCTGTTTGCAGAGTTGAAGGAGAAG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376547.7
ENST00000397517.6
ENST00000539966.6
CDS-3UTR TCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTTTAGGTGGGAAAGATaGTATGCAGAATCCACTACA +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIFRWER*YAESTT
Trigger: TGTAGTGGATTCTGCATATCATCTTTCCCACCTAAA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR GCA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTACTTCACAAGAGCAATaGAGGGATAAAACTATTGGA +
Preference number: 4 (lower is better)
Translates to: FAFVEVQIGVFCKRGALITSQEQ*RDKTIG
Trigger: TCCAATAGTTTTATCCCTGCATTGCTCTTGTGAAGT...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CCA 90 bp CTTACAAGATGTACCAGACGGTTTCCAGTACTAACAAAGGGAATAAAAATACCTTGGGTTGATCAAAGTTaGGATTTTGCTATTATTGTG +
Preference number: 4 (lower is better)
Translates to: LTRCTRRFPVLTKGIKIPWVDQS*DFAIIV
Trigger: CACAATAATAGCAAAATCCCAACTTTGATCAACCCA...AGGTATTTTTATTCCCTTTGTTAGTACTGGAAACCGTCTGGTACATCTTGTAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS CCA 90 bp CCCAGCCCAAGTGCAGGTCTCTCCTTCCCCAGCCCAGAGGGGCCCTaGGTAGTTACCTCTGGAGCCGCTGCACGAGCTGGGCCACCATGG +
Preference number: 5 (lower is better)
Translates to: PSPSAGLSFPSPEGP*VVTSGAAARAGPPW
Trigger: CCATGGTGGCCCAGCTCGTGCAGCGGCTCCAGAGGTAACTACCCAGGGCCCCTCTGGGCTGGGGAAGGAGAGACCTGCACTTGGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS GCA 90 bp ACCCTGGTGCGCGGCTGTCCGAGGGATTCCTCCTTCCAGAAGGTTTaGAACTCGCACTTTCCCCCGGTCCGCAGGTGCACGGGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TLVRGCPRDSSFQKV*NSHFPPVRRCTGAP
Trigger: CGGAGCCCCCGTGCACCTGCGGACCGGGGGAAAGTGCGAGTTGCAAACCTTCTGGAAGGAGGAATCCCTCGGACAGCCGCGCACCAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481288.1
CDS GCA 90 bp TCCTTCCAGAAGGTTTGCAACTCGCACTTTCCCCCGGTCCGCAGGTaGACGGGGGCTCCGGGCAAAGCCACTGCAAGTGGAACTCGCGGT +
Preference number: 5 (lower is better)
Translates to: SFQKVCNSHFPPVRR*TGAPGKATASGTRG
Trigger: ACCGCGAGTTCCACTTGCAGTGGCTTTGCCCGGAGCCCCCGTGCACCTGCGGACCGGGGGAAAGTGCGAGTTGCAAACCTTCTGGAAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481288.1
CDS-3UTR CAA 90 bp GAACTGTCAAGGCAGCAGCACGCCTGGTCCTCCTGGGGGTGTGGAGGACAGCCCGCAGTCAGGAGGGGCTaGGTTCCCATGGATACTCCT +
Preference number: 5 (lower is better)
Translates to: ELSRQQHAWSSWGCGGQPAVRRG*VPMDTP
Trigger: AGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGC...GGGCTGTCCTCCACACCCCCAGGAGGACCAGGCGTGCTGCTGCCTTGACAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACAAGGACAATCATCCCCTaGCCAGCCTGCCTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: WQCMGSCAPISASVSQGTRTIIP*PACLCS
Trigger: CGAGCAGAGGCAGGCTGGCAAGGGGATGATTGTCCT...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS CCA 90 bp CCCAGCACACATCCACTGCCTCCAAACGCCTGCACTTGTGCCAGATaGCAGTCAGGAGGGGCTTGGTTCCCATGGATACTCCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSTHPLPPNACTCAR*QSGGAWFPWILLWS
Trigger: GCTCCAGAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGAGGCAGTGGATGTGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CAA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGCTGGTGTCCACCTCATaGGCAGCAGCCAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMLVSTS*AAASQD
Trigger: GTCCTGGCTGGCTGCTGCCAATGAGGTGGACACCAG...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACATCGCGACCCCACGTGTaGAGTCACAAAGAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: WQCMGSCAPISASVSQGTSRPHV*SHKESL
Trigger: AAGAGACTCTTTGTGACTCAACACGTGGGGTCGCGA...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp AACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGAGCAAAAGCCAGCTTCCTaGGCTAAGATGCCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: NAGATSHPVHGPRLPEAEQKPAS*AKMPLK
Trigger: TTTTAAGGGCATCTTAGCCAAGGAAGCTGGCTTTTG...CTCAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTACAGACCAGCAGCAGTaGACGCTGAGGCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLTDQQQ*TLRQVP
Trigger: TGGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGT...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCTCAGACAGCAGGACGTaGGCCGCTTTAATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLSDSRT*AALMSL
Trigger: CAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGA...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGCGGTTTCCAGTGGCTTaGGCCCCTACTCGGGAAACG +
Preference number: 5 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMRFPVA*APTRET
Trigger: CGTTTCCCGAGTAGGGGCCAAAGCCACTGGAAACCG...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCACTGGGCCTCTGCAAATaGCATCCCCAAGCCGACTAC +
Preference number: 5 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAALGLCK*HPQADY
Trigger: GTAGTCGGCTTGGGGATGCAATTTGCAGAGGCCCAG...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCAGTCCTGGCGGGACTaGCCACCCGGGCCATCACGT +
Preference number: 5 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHQSWRD*PPGPSR
Trigger: ACGTGATGGCCCGGGTGGCAAGTCCCGCCAGGACTG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp AAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAGAGGCTGTTCTCACAGGCCTCCTaGCCTTTCAGAATCAGTTGT +
Preference number: 5 (lower is better)
Translates to: KTQELPATQSTALVSQRLFSQAS*PFRISC
Trigger: ACAACTGATTCTGAAAGGCAAGGAGGCCTGTGAGAA...CAGCCTCTGGGAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTCAGGCCTGCTCAGAGTaGTTTGGAGGTAGCATGGAC +
Preference number: 5 (lower is better)
Translates to: GTERLLVTVNPSQRLGLAQACSE*FGGSMD
Trigger: GTCCATGCTACCTCCAAACAACTCTGAGCAGGCCTG...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAAACAGACCAGCAGCAGTaGACGCTGAGGCAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQTDQQQ*TLRQVP
Trigger: TGGAACCTGCCTCAGCGTCAACTGCTGCTGGTCTGT...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GGGAGGTGTCAGCCTGGACACCTGAAGATGAACTGTCAAGGCAGCAGCACGCCTTCAGACAGCAGGACGTaGGCCGCTTTAATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GRCQPGHLKMNCQGSSTPSDSRT*AALMSL
Trigger: CAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGA...AGGCGTGCTGCTGCCTTGACAGTTCATCTTCAGGTGTCCAGGCTGACACCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS-3UTR CAA 90 bp AGGAAAGACCCAGAAATCCCCCTCATGATCACAGAGTCTCAGCCAGCTTTGGGACCCGCTCCCGCTGAGTaGACCACACCAAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: RKDPEIPLMITESQPALGPAPAE*TTPKLL
Trigger: CAGCAGCTTTGGTGTGGTCAACTCAGCGGGAGCGGG...TCCCAAAGCTGGCTGAGACTCTGTGATCATGAGGGGGATTTCTGGGTCTTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CAA 90 bp CTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCCCCTCATGATCACTCCAAACGCCTGCACTaGTGCCAGATGGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LSGGTQSQERPRNPPHDHSKRLH*CQMAVR
Trigger: CCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGA...GTGATCATGAGGGGGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CAA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCGTCCAAACAAAAGGTaGACTAACTGGCGTTCCCGT +
Preference number: 5 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLRPNKR*TNWRSR
Trigger: ACGGGAACGCCAGTTAGTCAACCTTTTGTTTGGACG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTAGGACACCACTCCCGTaGGATTTAGGGCCCACCCTA +
Preference number: 5 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETRTPLP*DLGPTL
Trigger: TAGGGTGGGCCCTAAATCCAACGGGAGTGGTGTCCT...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCTGGTGTCCACCTCATaGGCAGCAGCCAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: NSPGENVHRGELSNSIKPLVSTS*AAASQD
Trigger: GTCCTGGCTGGCTGCTGCCAATGAGGTGGACACCAG...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCCCAACCGTAGCAGGGTaGTTTTCTGTTAAGCAAAGC +
Preference number: 5 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLPTVAG*FSVKQS
Trigger: GCTTTGCTTAACAGAAAACAACCCTGCTACGGTTGG...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCGCAGCAACCCCTCAGTaGGGACATCTAAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLAATPQ*GHLKMS
Trigger: AGACATTTTTAGATGTCCCAACTGAGGGGTTGCTGC...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCGGACAAAACTCATCTTaGACTTATGCCGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSGQNSS*TYAAGL
Trigger: GAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCC...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTGGACAAAACTCATCTTaGACTTATGCCGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETGQNSS*TYAAGL
Trigger: GAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCC...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACACAGCTCAAAAACGCAGGAGCTACCAGCCACCCAGTCCACGGCCCTCGTCTCGCAGGGATAAAACTATaGGATAAGGAAGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: TQLKNAGATSHPVHGPRLAGIKL*DKEGRC
Trigger: GCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGC...GAGACGAGGGCCGTGGACTGGGTGGCTGGTAGCTCCTGCGTTTTTGAGCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGTCAGACAGCAGGACGTaGGCCGCTTTAATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMSDSRT*AALMSL
Trigger: CAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGA...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp AGGAAAGACCCAGAAATCCCCCTCATGATCACAGAGTCTCAGCCAGCTTTGGGATCCAAACGCCTGCACTaGTGCCAGATGGCAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RKDPEIPLMITESQPALGSKRLH*CQMAVR
Trigger: CCTGACTGCCATCTGGCACAAGTGCAGGCGTTTGGA...TCCCAAAGCTGGCTGAGACTCTGTGATCATGAGGGGGATTTCTGGGTCTTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CAA 90 bp CCTCACGTGTGCAAAACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAGAGTCTCAGCCAGCTTaGGGAGGTGTCAGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: PHVCKTSLCTVRWDAVSGESQPA*GGVSLD
Trigger: GTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTC...TCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGTTTTGCACACGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CAA 90 bp GGCTCTTCACAGGACAGTAGGCAGCCCCTTCAATCACTTCCAAATAGCAAAAGGGAGTCTCAGCCAGCTTaGGGAGGTGTCAGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: GSSQDSRQPLQSLPNSKRESQPA*GGVSLD
Trigger: GTCCAGGCTGACACCTCCCAAAGCTGGCTGAGACTC...CCTTTTGCTATTTGGAAGTGATTGAAGGGGCTGCCTACTGTCCTGTGAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CAA 90 bp GCCCACCTGAGAACCAGGAACGCACCCTCTCTGTGGAGCTCTGACTGGTGTAGCAAAACCCGTGTGTCATaGATCAGCACCATTTGTGGT +
Preference number: 5 (lower is better)
Translates to: AHLRTRNAPSLWSSDWCSKTRVS*ISTICG
Trigger: ACCACAAATGGTGCTGATCAATGACACACGGGTTTT...GCTACACCAGTCAGAGCTCCACAGAGAGGGTGCGTTCCTGGTTCTCAGGTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp TGGCAATGCATGGGGTCCTGCGCCCCCATTTCTGCCTCGGTGTCACAGGGCACATGGACTTCCCGGTGTTaGTTTGTTTGTTTGCAATAC +
Preference number: 5 (lower is better)
Translates to: WQCMGSCAPISASVSQGTWTSRC*FVCLQY
Trigger: GTATTGCAAACAAACAAACAAACACCGGGAAGTCCA...TGTGCCCTGTGACACCGAGGCAGAAATGGGGGCGCAGGACCCCATGCATTGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp CAGATCAGCAACCTCCAACTGCATCATCTCGGTGAGCAAGTGCGCAAGCAGTCCCCTGCTCAGAGTTGTTaGGAGGTAGCATGGACACAG +
Preference number: 5 (lower is better)
Translates to: QISNLQLHHLGEQVRKQSPAQSC*EVAWTQ
Trigger: CTGTGTCCATGCTACCTCCAAACAACTCTGAGCAGG...GGACTGCTTGCGCACTTGCTCACCGAGATGATGCAGTTGGAGGTTGCTGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACTTCTTTATGTACTGTCAGGTGGGACGCAGTCTCAGGAAAGACCCAGAAATCCTACTCCTACAACAAGTaGGGAGGGGGCAGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: TSLCTVRWDAVSGKTQKSYSYNK*GGGREG
Trigger: GCCCTCCCTGCCCCCTCCCAACTTGTTGTAGGAGTA...GGATTTCTGGGTCTTTCCTGAGACTGCGTCCCACCTGACAGTACATAAAGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418038.5
CDS-3UTR CAA 90 bp GGCACTGAGAGGCTACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTTTGATTCCAAACTACTaGCTGGACACTGGTGGTTCT +
Preference number: 5 (lower is better)
Translates to: GTERLLVTVNPSQRLGLALIPNY*LDTGGS
Trigger: AGAACCACCAGTGTCCAGCAAGTAGTTTGGAATCAA...AGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGTAGCCTCTCAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCAGAGTCTCTTGTGTATaGATGGCCGGACACACTCGT +
Preference number: 5 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCRVSCV*MAGHTR
Trigger: ACGAGTGTGTCCGGCCATCAATACACAAGAGACTCT...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp AACAGACACACTGGCTGCCTGCCTAGCAAGCATAGGCCCCTTCCAGAGAAGCAACCAAATGGGACAGCATaGCACCCATTTGAGAAGCAC +
Preference number: 5 (lower is better)
Translates to: NRHTGCLPSKHRPLPEKQPNGTA*HPFEKH
Trigger: GTGCTTCTCAAATGGGTGCAATGCTGTCCCATTTGG...TTGCTTCTCTGGAAGGGGCCTATGCTTGCTAGGCAGGCAGCCAGTGTGTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTTTACCCTGCACGGTGTaGGCTGAGGCCCTAGACATC +
Preference number: 5 (lower is better)
Translates to: VPGTCRYSYILLQLWFETLPCTV*AEALDI
Trigger: GATGTCTAGGGCCTCAGCCAACACCGTGCAGGGTAA...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGGCTGGTGATGTCACTTaGGCAAAGGGACGAAATGAG +
Preference number: 5 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMAGDVT*AKGRNE
Trigger: CTCATTTCGTCCCTTTGCCAAAGTGACATCACCAGC...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS CCA 90 bp TCAGTAACCCCCTTCTCGCTCCTTCTTCCATTCACCCCTCTCTGCTaGCTCTCTGCCCTTGGCAACATGCTCCAGTTTCTCCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: SVTPFSLLLPFTPLC*LSALGNMLQFLPFK
Trigger: TTTAAATGGGAGAAACTGGAGCATGTTGCCAAGGGCAGAGAGCCAGCAGAGAGGGGTGAATGGAAGAAGGAGCGAGAAGGGGGTTACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS-3UTR CAA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATGGGGCTGAGTATGATTaGTCTGGCGACTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNGAEYD*SGDCRD
Trigger: GTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCC...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACGGGGCTGAGTATGATTaGTCTGGCGACTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHGAEYD*SGDCRD
Trigger: GTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCC...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACTGGTGACAGTAAACCCGTCTCAAAGGCTGGGCCTGGCTACAGACCAGCAGCAGCAGGGATAAAACTATaGGATAAGGAAGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: TGDSKPVSKAGPGYRPAAAGIKL*DKEGRC
Trigger: GCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGC...TGCTGCTGGTCTGTAGCCAGGCCCAGCCTTTGAGACGGGTTTACTGTCACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACACTGGCGTTCCCGTGTaGCAGGTGGATGGAAGTGAT +
Preference number: 5 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHTGVPV*QVDGSD
Trigger: ATCACTTCCATCCACCTGCAACACGGGAACGCCAGT...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCAATGACTCAGGCCTCTaGGGCTCCAGGTGTCACGGG +
Preference number: 5 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCNDSGL*GSRCHG
Trigger: CCCGTGACACCTGGAGCCCAAGAGGCCTGAGTCATT...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGCCTTTCAGAATCAGTaGTCTGGAAACCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTAFQNQ*SGNLLR
Trigger: CCTCAGCAGGTTTCCAGACAACTGATTCTGAAAGGC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACCACTTGTTGCTCTACGGGGGAAGGGGCTGAGTATGATTTGTCTGGCGACTGCTTCCCAACCTACTTCTaGGTGCAAGTTGACCAAATC +
Preference number: 5 (lower is better)
Translates to: TTCCSTGEGAEYDLSGDCFPTYF*VQVDQI
Trigger: GATTTGGTCAACTTGCACCAAGAAGTAGGTTGGGAA...GCAGTCGCCAGACAAATCATACTCAGCCCCTTCCCCCGTAGAGCAACAAGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GCCCGACACCAGCAGGCGATTCTGTTCTCATGGCAGAAAGTGGGGTCCCAACTTCTTCCCGGTGTTTGTTaGTTTGTTTGCAATACACTC +
Preference number: 5 (lower is better)
Translates to: ARHQQAILFSWQKVGSQLLPGVC*FVCNTL
Trigger: GAGTGTATTGCAAACAAACAAACAAACACCGGGAAG...AAGTTGGGACCCCACTTTCTGCCATGAGAACAGAATCGCCTGCTGGTGTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGGGTTGAGAGCTGGGTaGATCAAAGTTGGGATTTTG +
Preference number: 5 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTGLRAG*IKVGIL
Trigger: CAAAATCCCAACTTTGATCAACCCAGCTCTCAACCC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACAGCTCGAGAGCTGGGTaGAGAGCTGGGTTGATCAAA +
Preference number: 5 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHSSRAG*RAGLIK
Trigger: TTTGATCAACCCAGCTCTCAACCCAGCTCTCGAGCT...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCGGGGCTGAGTATGATTaGTCTGGCGACTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCGAEYD*SGDCRD
Trigger: GTCTCTGCAGTCGCCAGACAAATCATACTCAGCCCC...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACACGCACGGCAGGGATAAAACTATaGGATAAGGAAGGCAGATGC +
Preference number: 5 (lower is better)
Translates to: GVFQSVSSHTHSHEYTRTAGIKL*DKEGRC
Trigger: GCATCTGCCTTCCTTATCCAATAGTTTTATCCCTGC...CGTGCGTGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp CTCCCTGGAGTCTTCCAAAGTGTCTCATCACACACACACAGCCACGAGTACACAATAAGCCGTGGTGTTTaGCTGTCTGTCTGTGTCACA +
Preference number: 5 (lower is better)
Translates to: LPGVFQSVSSHTHSHEYTISRGV*LSVCVT
Trigger: TGTGACACAGACAGACAGCAAAACACCACGGCTTAT...TGTGTACTCGTGGCTGTGTGTGTGTGATGAGACACTTTGGAAGACTCCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS GCA 90 bp TTCTTCCATTCACCCCTCTCTGCTGGCTCTCTGCCCTTGGCAACATaGTCCAGTTTCTCCCATTTAAAACAAACGAAAGCACTCTCCCTA +
Preference number: 5 (lower is better)
Translates to: FFHSPLSAGSLPLAT*SSFSHLKQTKALSL
Trigger: TAGGGAGAGTGCTTTCGTTTGTTTTAAATGGGAGAAACTGGAGCATGTTGCCAAGGGCAGAGAGCCAGCAGAGAGGGGTGAATGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS-3UTR CAA 90 bp CACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCTCCCCCGACAGGAAATGGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 5 (lower is better)
Translates to: HRGELSNSIKPHLPRQEMANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...CATTTCCTGTCGGGGGAGGTGGGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp CACAGCAGCATCAGGCTCCCTCCAGAAGTCACCACTCACTCATTCCTGGAGACTGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 5 (lower is better)
Translates to: HSSIRLPPEVTTHSFLETANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...AGTCTCCAGGAATGAGTGAGTGGTGACTTCTGGAGGGAGCCTGATGCTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GAGTCCGAGAACATCCAGAAAGACTACGTGTTCAAGCTGCACTTCAAGTCCCACCCATCTGAGTGGAGTTaGAGACACACTACACATGAG +
Preference number: 5 (lower is better)
Translates to: ESENIQKDYVFKLHFKSHPSEWS*RHTTHE
Trigger: CTCATGTGTAGTGTGTCTCAAACTCCACTCAGATGG...GTGGGACTTGAAGTGCAGCTTGAACACGTAGTCTTTCTGGATGTTCTCGGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp CCCTTCCAGAGAAGCAAAATAACTCTTAAGGTCCCCGGCAACCGCTACAGCAATGTCACAAAGAGTCTCTaGTGTATTGATGGCCGGACA +
Preference number: 5 (lower is better)
Translates to: PFQRSKITLKVPGNRYSNVTKSL*CIDGRT
Trigger: TGTCCGGCCATCAATACACAAGAGACTCTTTGTGAC...ATTGCTGTAGCGGTTGCCGGGGACCTTAAGAGTTATTTTGCTTCTCTGGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ATGGGACAGCATTGCACCCATTTGAGAAGCACCGGTAGAGAGCAAATACACAAACAGCATTGCACCCATTaGAGAAGCACCGGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: MGQHCTHLRSTGREQIHKQHCTH*RSTGRE
Trigger: CTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTG...TTTGTGTATTTGCTCTCTACCGGTGCTTCTCAAATGGGTGCAATGCTGTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp AACAGCCCAGGAGAGAATGTACACAGAGGCGAGCTTTCTAACTCCATCAAACCCCACCCACTAACTTCCTaGCTTCCAAAAATCCTGTCT +
Preference number: 5 (lower is better)
Translates to: NSPGENVHRGELSNSIKPHPLTS*LPKILS
Trigger: AGACAGGATTTTTGGAAGCAAGGAAGTTAGTGGGTG...GGGTTTGATGGAGTTAGAAAGCTCGCCTCTGTGTACATTCTCTCCTGGGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GTCCCCGGCACCTGTCGTTATTCCTATATCCTCCTGCAACTGTGGTTTGAAACTCAAAAGCCAGCTTCCTaGGCTAAGATGCCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: VPGTCRYSYILLQLWFETQKPAS*AKMPLK
Trigger: TTTTAAGGGCATCTTAGCCAAGGAAGCTGGCTTTTG...AGTTTCAAACCACAGTTGCAGGAGGATATAGGAATAACGACAGGTGCCGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp CACTTCCAAATAGCAAAAGGGACCTCACGTGTGCAAAACTTCTTTATGTACTGTGCAGTCAGGAGGGGCTaGGTTCCCATGGATACTCCT +
Preference number: 5 (lower is better)
Translates to: HFQIAKGTSRVQNFFMYCAVRRG*VPMDTP
Trigger: AGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGC...ACAGTACATAAAGAAGTTTTGCACACGTGAGGTCCCTTTTGCTATTTGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000418038.5
ENST00000444574.1
CDS-3UTR CAA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCAGATACTCGTTTTCTaGAGCTTTATTGGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKQILVF*SFIGPC
Trigger: GCAGGGGCCAATAAAGCTCAAGAAAACGAGTATCTG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGCTCATTCCTGGAGACTaGGGGACAAGGCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKLIPGD*GTRQSP
Trigger: AGGAGACTGCCTTGTCCCCAAGTCTCCAGGAATGAG...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ATGGGACACGTCCCGCCATTCTCTGCCATGTCCATGAAAATAGGAGGTAGCGTTGCCAGTATTAAAACATaGTCATTACGAGAGTGCCAA +
Preference number: 5 (lower is better)
Translates to: MGHVPPFSAMSMKIGGSVASIKT*SLRECQ
Trigger: TTGGCACTCTCGTAATGACAATGTTTTAATACTGGC...AACGCTACCTCCTATTTTCATGGACATGGCAGAGAATGGCGGGACGTGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ATTTTCACCTATTGGCTGCTGCATTTTACGAAGTGGACTTCCCGGTGTTTGTTTCGGCCTGACTTCACCTaGTGTTTCTGTAAGCGATGC +
Preference number: 5 (lower is better)
Translates to: IFTYWLLHFTKWTSRCLFRPDFT*CFCKRC
Trigger: GCATCGCTTACAGAAACACAAGGTGAAGTCAGGCCG...AAACAAACACCGGGAAGTCCACTTCGTAAAATGCAGCAGCCAATAGGTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGGGACAAAACTCATCTTaGACTTATGCCGCCGGCCTC +
Preference number: 5 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKGQNSS*TYAAGL
Trigger: GAGGCCGGCGGCATAAGTCAAAGATGAGTTTTGTCC...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp ATGATACAGTCCCTGTGCTTAAGAACATGCCCTATTAGGTCACTCTGCCTTTGCCAAAAGCCAGCTTCCTaGGCTAAGATGCCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: MIQSLCLRTCPIRSLCLCQKPAS*AKMPLK
Trigger: TTTTAAGGGCATCTTAGCCAAGGAAGCTGGCTTTTG...GCAAAGGCAGAGTGACCTAATAGGGCATGTTCTTAAGCACAGGGACTGTATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCCGGTGTTTGTTTGTTaGTTTGCAATACACTCAGTG +
Preference number: 5 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKPVFVC*FAIHSV
Trigger: CACTGAGTGTATTGCAAACAAACAAACAAACACCGG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp ACTCGTTTTCTTGAGCTTTATTGGCCCCTGCATGATACAGTCCCTGTGCTTAAGCCTGCAATTCATATTTaGAATAGAGATCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: TRFLELYWPLHDTVPVLKPAIHI*NRDPGP
Trigger: AGGCCCAGGATCTCTATTCAAAATATGAATTGCAGG...CTTAAGCACAGGGACTGTATCATGCAGGGGCCAATAAAGCTCAAGAAAACGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTTCAGACAGCAGGACGTaGGCCGCTTTAATGTCTCTG +
Preference number: 5 (lower is better)
Translates to: FAFVEVQIGVFCKRGALISDSRT*AALMSL
Trigger: CAGAGACATTAAAGCGGCCAACGTCCTGCTGTCTGA...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000376547.7
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAAAAGCCACTTTGCTTaGTTTCCCCTTTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKKSHFA*FPLSRT
Trigger: TGTCCTGGAAAGGGGAAACAAAGCAAAGTGGCTTTT...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp GGCAAACGGGGAAAATTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 5 (lower is better)
Translates to: GKRGKFAFVEVQIGVFCKANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...CTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS-3UTR CAA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTCCGTGTGTTAATCATTaGCCTTACAAGATGTACCAG +
Preference number: 5 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIPCVNH*PYKMYQ
Trigger: CTGGTACATCTTGTAAGGCAAATGATTAACACACGG...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539966.6
CDS-3UTR CAA 90 bp TTTGCATTTGTTGAGGTACAAATAGGAGTGTTCTGTAAGAGAGGGGCATTAATTGCAAACGGGGAAAATTaGCATTTGTTGAGGTACAAA +
Preference number: 5 (lower is better)
Translates to: FAFVEVQIGVFCKRGALIANGEN*HLLRYK
Trigger: TTTGTACCTCAACAAATGCAAATTTTCCCCGTTTGC...AATTAATGCCCCTCTCTTACAGAACACTCCTATTTGTACCTCAACAAATGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000376547.7
ENST00000376554.8
ENST00000397517.6
ENST00000539966.6
CDS CAA 90 bp GACCCTGGTGCGCGGCTGTCCGAGGGATTCCTCCTTCCAGAAGGTTaGCAACTCGCACTTTCCCCCGGTCCGCAGGTGCACGGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: DPGARLSEGFLLPEG*QLALSPGPQVHGGS
Trigger: GGAGCCCCCGTGCACCTGCGGACCGGGGGAAAGTGCGAGTTGCAAACCTTCTGGAAGGAGGAATCCCTCGGACAGCCGCGCACCAGGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481288.1
CDS GCA 72 bp AAGGTTTGCAACTCGCACTTTCCCCCGGTCCGCAGGTaGACGGGGGCTCCGGGCAAAGCCACTGCAAGTGGA +
Preference number: 6 (lower is better)
Translates to: KVCNSHFPPVRR*TGAPGKATASG
Trigger: TCCACTTGCAGTGGCTTTGCCCGGAGCCCCCGTGCACCTGCGGACCGGGGGAAAGTGCGAGTTGCAAACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481288.1
CDS GCA 72 bp CGCGGCTGTCCGAGGGATTCCTCCTTCCAGAAGGTTTaGAACTCGCACTTTCCCCCGGTCCGCAGGTGCACG +
Preference number: 6 (lower is better)
Translates to: RGCPRDSSFQKV*NSHFPPVRRCT
Trigger: CGTGCACCTGCGGACCGGGGGAAAGTGCGAGTTGCAAACCTTCTGGAAGGAGGAATCCCTCGGACAGCCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481288.1
CDS CAA 72 bp GCGCGGCTGTCCGAGGGATTCCTCCTTCCAGAAGGTTaGCAACTCGCACTTTCCCCCGGTCCGCAGGTGCAC +
Preference number: 6 (lower is better)
Translates to: ARLSEGFLLPEG*QLALSPGPQVH
Trigger: GTGCACCTGCGGACCGGGGGAAAGTGCGAGTTGCAAACCTTCTGGAAGGAGGAATCCCTCGGACAGCCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481288.1
CDS CCA 72 bp GCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGGCTTaGTTCCCATGGATACTCCTCTGGAGCCGCTGCACG +
Preference number: 6 (lower is better)
Translates to: ACTCARWQSGGA*FPWILLWSRCT
Trigger: CGTGCAGCGGCTCCAGAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS CAA 72 bp CGCCTGCACTTGTGCCAGATGGCAGTCAGGAGGGGCTaGGTTCCCATGGATACTCCTCTGGAGCCGCTGCAC +
Preference number: 6 (lower is better)
Translates to: RLHLCQMAVRRG*VPMDTPLEPLH
Trigger: GTGCAGCGGCTCCAGAGGAGTATCCATGGGAACCAAGCCCCTCCTGACTGCCATCTGGCACAAGTGCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444574.1
CDS GCA 72 bp ACCCCCTTCTCGCTCCTTCTTCCATTCACCCCTCTCTaGTGGCTCTCTGCCCTTGGCAACATGCTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: TPFSLLLPFTPL*WLSALGNMLQF
Trigger: AAACTGGAGCATGTTGCCAAGGGCAGAGAGCCAGCAGAGAGGGGTGAATGGAAGAAGGAGCGAGAAGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS CCA 72 bp GTGGCCCTCCTTTTATTCAAGGCCAGTCCCCAAAGCTaGGCTCTGGAGTCCATCCTTCTCTCCTCCAGGATA +
Preference number: 6 (lower is better)
Translates to: VALLLFKASPQS*ALESILLSSRI
Trigger: TATCCTGGAGGAGAGAAGGATGGACTCCAGAGCCCAGCTTTGGGGACTGGCCTTGAATAAAAGGAGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS TCA 72 bp TCTGGGTCTGCCTTTAGGTTCGTGCTCCCTCCAGGATaGGGTAGAGTGGCCCTCCTTTTATTCAAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: SGSAFRFVLPPG*GRVALLLFKAS
Trigger: ACTGGCCTTGAATAAAAGGAGGGCCACTCTACCTCATCCTGGAGGGAGCACGAACCTAAAGGCAGACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS CCA 72 bp CCTTTAGGTTCGTGCTCCCTCCAGGATGAGGTAGAGTaGCCCTCCTTTTATTCAAGGCCAGTCCCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: PLGSCSLQDEVE*PSFYSRPVPKA
Trigger: AGCTTTGGGGACTGGCCTTGAATAAAAGGAGGGCCACTCTACCTCATCCTGGAGGGAGCACGAACCTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376547.7
CDS GCA 72 bp TCACCCCTCTCTGCTGGCTCTCTGCCCTTGGCAACATaGTCCAGTTTCTCCCATTTAAAACAAACGAAAGCA +
Preference number: 6 (lower is better)
Translates to: SPLSAGSLPLAT*SSFSHLKQTKA
Trigger: TGCTTTCGTTTGTTTTAAATGGGAGAAACTGGAGCATGTTGCCAAGGGCAGAGAGCCAGCAGAGAGGGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376547.7