Pregenerated sensors for STK17B (Homo sapiens)
Ensembl gene IDs: ENSG00000081320Ensembl transcript IDs: ENST00000263955.9, ENST00000409228.5, ENST00000420683.1, ENST00000449152.1, ENST00000606789.1
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCGAGGTTGCCGTGAGCTaGGATCATGCCACTGCACTC | + |
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Preference number: 2 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFEVAVS*DHATAL Trigger: GAGTGCAGTGGCATGATCTCAGCTCACGGCAACCTC...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCGAAGTCAGGAGTTTGTaGCCAGCCTGGCCAACATGG | + |
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Preference number: 2 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFEVRSL*PAWPTW Trigger: CCATGTTGGCCAGGCTGGTCACAAACTCCTGACTTC...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCAGCAAAAGACCACAATaGGGGGCCACTCTGCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFSKRPQ*GATLQM Trigger: CATCTGCAGAGTGGCCCCTCATTGTGGTCTTTTGCT...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR TCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAAGCTATCTCAGGATATaGAATCATAACATGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: PSLLHWSQQKTTMRGHSASYLRI*NHNMLA Trigger: TGCTAGCATGTTATGATTTCATATCCTGAGATAGCT...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR CAA 90 bp | AGGTTGCATGCTCCTTATGAGAATCTAATGATAAATGTAATGTACTaGAATCATCCTGAAACCATCCCCCTAAACCCCCAGTCCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RLHAPYENLMINVMY*NHPETIPLNPQSCG Trigger: TCCACAGGACTGGGGGTTTAGGGGGATGGTTTCAGGATGATTCAAGTACATTACATTTATCATTAGATTCTCATAAGGAGCATGCAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR CAA 90 bp | AGGAGCTCGAATCCTGCTGTGAACCACACGTGCAAGAGATCTAGGTaGCATGCTCCTTATGAGAATCTAATGATAAATGTAATGTACTTG | + |
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Preference number: 2 (lower is better) Translates to: RSSNPAVNHTCKRSR*HAPYENLMINVMYL Trigger: CAAGTACATTACATTTATCATTAGATTCTCATAAGGAGCATGCAACCTAGATCTCTTGCACGTGTGGTTCACAGCAGGATTCGAGCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR CCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAATGTTGATAGAGGCATaGTATAAGAGTCACCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: VMFYDHISLATADSGTVLMLIEA*YKSHLR Trigger: TCTAAGGTGACTCTTATACCATGCCTCTATCAACAT...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR GCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAGAGGAAAAAGACATTTaGGTTAAAATACGAAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VMFYDHISLATADSGTVLEEKDI*VKIRRH Trigger: ATGCCTTCGTATTTTAACGCAAATGTCTTTTTCCTC...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR TCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGACAGACCACAGAGAATaGAAATCTTACGAAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LYTCIPNISIFQTLSDLKTDHRE*KSYEVS Trigger: TGAAACTTCGTAAGATTTTCATTCTCTGTGGTCTGT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR CAA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCACAGATCTCAAGTAGGTaGGGAGGAGGAAAAAGACAT | + |
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Preference number: 3 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAQISSR*GGGKRH Trigger: ATGTCTTTTTCCTCCTCCCAACCTACTTGAGATCTG...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR-3UTR CAA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCGCTCTCCCTAGTCTCTaGCATTGGTCCCAGCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFALPSL*HWSQQK Trigger: CTTTTGCTGGGACCAATGCAAGAGACTAGGGAGAGC...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR GCA 72 bp | TCTCAAAGGAGCTCGAATCCTGCTGTGAACCACACGTaGAAGAGATCTAGGTTGCATGCTCCTTATGAGAAT | + |
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Preference number: 3 (lower is better) Translates to: SQRSSNPAVNHT*KRSRLHAPYEN Trigger: ATTCTCATAAGGAGCATGCAACCTAGATCTCTTGCACGTGTGGTTCACAGCAGGATTCGAGCTCCTTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR TCA 72 bp | GGAAGGCTATTCAAAGCATGGTCCATTAACTATTTGTaGGCTGTCCAGAATGAAAGAGGCTTGTGCCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: GRLFKAWSINYL*AVQNERGLCQN Trigger: ATTCTGGCACAAGCCTCTTTCATTCTGGACAGCTCACAAATAGTTAATGGACCATGCTTTGAATAGCCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR TCA 72 bp | CAGATATGTTTATTAGACACAAAGAGGGTTCATAGATaGCCTAGGTCAAAGGCTAGAACATGCAGACATACT | + |
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Preference number: 3 (lower is better) Translates to: QICLLDTKRVHR*PRSKARTCRHT Trigger: AGTATGTCTGCATGTTCTAGCCTTTGACCTAGGTCATCTATGAACCCTCTTTGTGTCTAATAAACATATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| 3UTR GCA 72 bp | TATAGATATATACATACACCTGTACATACACACATGTaGACACATACACACACAAGTAGAGAAAACTTTTCC | + |
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Preference number: 3 (lower is better) Translates to: YRYIHTPVHTHM*THTHTSRENFS Trigger: GGAAAAGTTTTCTCTACTTGTGTGTGTATGTGTGCACATGTGTGTATGTACAGGTGTATGTATATATCTATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAAGGTTCTCCCGGGACTaGCCCCTCCAGGGGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLRFSRD*PLQGAA Trigger: AGCGGCCCCCTGGAGGGGGCAGTCCCGGGAGAACCT...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAAGGCAGAGGTTGCCGTaGGCTGAGATCATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSARQRLP*AEIMPL Trigger: CAGTGGCATGATCTCAGCTCACGGCAACCTCTGCCT...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCACAGTCTTGCTACCGCTaGCTCGGGCACTGTGTTAAT | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAQSCYR*LGHCVN Trigger: ATTAACACAGTGCCCGAGTCAGCGGTAGCAAGACTG...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTATGGCTTCTCGTGAAGTaGCTCCTGGCGACAGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLWLLVK*LLATAA Trigger: CGCTGCTGTCGCCAGGAGTCACTTCACGAGAAGCCA...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAGTGAGCTGTCCAGAATaGAAGAGGCTTGTGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAVSCPE*KRLVPE Trigger: TTCTGGCACAAGCCTCTTTCATTCTGGACAGCTCAC...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAAGCTCCTTTGGCACCTaGGTTGAGCACAATATACCA | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSASSFGT*VEHNIP Trigger: TGGTATATTGTGCTCAACTCAGGTGCCAAAGGAGCT...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCACTCTCCCTAGTCTCTTaGATTGGTCCCAGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSALSLVS*IGPSKR Trigger: TCTTTTGCTGGGACCAATGCAAGAGACTAGGGAGAG...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAACGGGGACAAGACTTTaGCAATTCAAGCACAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSATGTRL*QFKHSN Trigger: ATTGCTGTGCTTGAATTGGCAAAGTCTTGTCCCCGT...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACAGATGGCTTTAAGCTaGGCCTCCTCACTCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLQMALS*ASSLTR Trigger: CCTAGTGAGTGAGGAGGCTCAGCTTAAAGCCATCTG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCACCCCGAGAGGGTATATaGTGCTCAGTAATATATTCT | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAPREGI*CSVIYS Trigger: AGAATATATTACTGAGCAGCATATACCCTCTCGGGG...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACCTCGACATGTTAGGTaGTTCCCAGGTCTGCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLPRHVR*FPGLLL Trigger: AAGAAGCAGACCTGGGAATCACCTAACATGTCGAGG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCACTAACAGAGCAAATCTaGAACAAGTTCATGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSALTEQI*NKFMGI Trigger: AATCCCCATGAACTTGTTTCAGATTTGCTCTGTTAG...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGGAGGTTGCCGTGAGCTaGGATCATGCCACTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKEVAVS*DHATAL Trigger: GAGTGCAGTGGCATGATCTCAGCTCACGGCAACCTC...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACAAGTACCTTATTACTaGCTAGAGCAGGGGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLQVPYY*LEQGSP Trigger: TGGGGACCCCTGCTCTAGTCAGTAATAAGGTACTTG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCATTTTGGAAACCATGCTaGTATCCTCTGGGATATTCT | + |
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Preference number: 4 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAFWKPC*YPLGYS Trigger: AGAATATCCCAGAGGATAGCAGCATGGTTTCCAAAA...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR CCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAAGGGAGCTCCGAACGTaGCAGGATCCACTTTTACTT | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLRELRT*QDPLLL Trigger: AAGTAAAAGTGGATCCTGCCACGTTCGGAGCTCCCT...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACTTTGGCACCTGAGTTaGGCACAATATACCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLLWHLS*AQYTTA Trigger: TGCTGTGGTATATTGTGCTCAACTCAGGTGCCAAAG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGAGCAAAAGACCACAATaGGGGGCCACTCTGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKSKRPQ*GATLQM Trigger: CATCTGCAGAGTGGCCCCTCATTGTGGTCTTTTGCT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCTGCTGTAGCCAAGAATaGGAAAGGCATATCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFCCSQE*ERHISA Trigger: AGCAGAGATATGCCTTTCTCATTCTTGGCTACAGCA...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCAAGAGGGTTCATAGATaGCCTAGGTCAAAGGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFKRVHR*PRSKAR Trigger: TCTAGCCTTTGACCTAGGTCATCTATGAACCCTCTT...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAAGAAAGGCATATCTCTaGTGTTGGTCTTTTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLRKAYL*CWSFLW Trigger: CCAGAGAAAAGACCAACAGCAGAGATATGCCTTTCT...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGCAGGTAAACACAGGCTaGAAATTTCTCCACCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKQVNTG*KFLHLQ Trigger: CTGCAGGTGGAGAAATTTTCAGCCTGTGTTTACCTG...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGATTCTGGTGTTCCCATaGTTTCCCGAAGTTCACACG | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKILVFP*FPEVHT Trigger: CGTGTGAACTTCGGGAAATCATGGGAACACCAGAAT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCTTTACTAAAAGGCTCTaGATAAAGTCTGTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFFTKRL*IKSVAS Trigger: GCTGGCCACAGACTTTATTCAGAGCCTTTTAGTAAA...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAGGTGATTCCCAGGTCTaGTTCTTTAGTCACTTATTT | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLGDSQV*FFSHLF Trigger: AAATAAGTGACTAAAGAAGCAGACCTGGGAATCACC...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR GCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACGAGAGGGTATATGCTaGTCAGTAATATATTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLREGIC*SVIYSV Trigger: CACAGAATATATTACTGAGCAGCATATACCCTCTCG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR CCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCGAGTTTGAGAGGAACTaGAAGTTTCTTCAGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFEFERN*KFLQGE Trigger: TTCACCCTGAAGAAACTTCCAGTTCCTCTCAAACTC...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR CCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACGAAACGAAATCTTTTaGAAACCATGCTGCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLRNEIF*KPCCYP Trigger: AGGATAGCAGCATGGTTTCCAAAAGATTTCGTTTCG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR CCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGCCTAGTCTCTTGCATTaGTCCCAGCAAAAGACCACA | + |
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Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKPSLLH*SQQKTT Trigger: TGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTATTGGCCAGTAGATTTTaGTATACATTGTCTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLLASRF*YTLSNH Trigger: GTGGTTAGACAATGTATATCAAAATCTACTGGCCAA...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCGAAGTTTCTTCAGGGTaGAACAAGTTTTCAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFEVSSG*NKFSKS Trigger: GGACTTTGAAAACTTGTTTCACCCTGAAGAAACTTC...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAAAGGAAGCAATGTGTTaGTTTATATTCTGGCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLKEAMC*FIFWHK Trigger: CTTGTGCCAGAATATAAATCAACACATTGCTTCCTT...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR TCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAAGGCTTGTGCCAGAATaGAAATCAATTACATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLRLVPE*KSITSL Trigger: TAGTGATGTAATTGATTTTCATTCTGGCACAAGCCT...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CCA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAGCATATCTCTGCTGTTaGTCTTTTCTCTGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VMFYDHISLATADSGTVLAYLCC*SFLWIF Trigger: AAAAATCCAGAGAAAAGACCAACAGCAGAGATATGC...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR TCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGACAGCAACATGGTCATaGGATCACAGTTATCGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKTATWS*DHSYRN Trigger: GTTACGATAACTGTGATCTCATGACCATGTTGCTGT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR GCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGCGAAGTTCACACGCATaGCCTATTTTTCGAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKRSSHA*PIFRDI Trigger: AATGTCTCGAAAAATAGGGCATGCGTGTGAACTTCG...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR GCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCCCATTACAATTTCACTaGTCAGAGCTAGGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFPLQFH*SELGSL Trigger: TAAAGAACCTAGCTCTGAGCAGTGAAATTGTAATGG...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGCAAGTTCATGGGGATTaGGTAATGAGTCATCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKQVHGD*VMSHRN Trigger: GTTTCGATGACTCATTACCCAATCCCCATGAACTTG...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR GCA 90 bp | TATTCTGTGCTGTTAGTTTTTGTGTATGTGCCCGAGGCTATACATTTAGTCTTAACGGGGACAAGACTTTaGCAATTCAAGCACAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSVLLVFVYVPEAIHLVLTGTRL*QFKHSN Trigger: ATTGCTGTGCTTGAATTGGCAAAGTCTTGTCCCCGT...TAAGACTAAATGTATAGCCTCGGGCACATACACAAAAACTAACAGCACAGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606789.1 |
||
| CDS-3UTR GCA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCGAGGAAAAAGACATTTaGGTTAAAATACGAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFEEKDI*VKIRRH Trigger: ATGCCTTCGTATTTTAACGCAAATGTCTTTTTCCTC...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGTCTGAAACAAGTTCATaGGGATTGGGTAATGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKSETSS*GLGNES Trigger: TGACTCATTACCCAATCCCCATGAACTTGTTTCAGA...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| 3UTR CAA 72 bp | AATCCTGCTGTGAACCACACGTGCAAGAGATCTAGGTaGCATGCTCCTTATGAGAATCTAATGATAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: NPAVNHTCKRSR*HAPYENLMINV Trigger: TACATTTATCATTAGATTCTCATAAGGAGCATGCAACCTAGATCTCTTGCACGTGTGGTTCACAGCAGGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR GCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGATTCCACATATCTGTTaGTGTGGTAATGGGATCATA | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKIPHIC*CGNGII Trigger: TATGATCCCATTACCACAGCAACAGATATGTGGAAT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGATGTTGATAGAGGCATaGTATAAGAGTCACCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKMLIEA*YKSHLR Trigger: TCTAAGGTGACTCTTATACCATGCCTCTATCAACAT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR GCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGGAAAATTTCTCCACCTaGAGCATATTCCAATATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKENFST*SIFQYQ Trigger: TTGATATTGGAATATGCTGCAGGTGGAGAAATTTTC...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR GCA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGTCAAAGGCTAGAACATaGAGACATACTTTTAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYTCIPNISIFQTLSDLKSKART*RHTFKN Trigger: GTTCTTAAAAGTATGTCTGCATGTTCTAGCCTTTGA...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR TCA 90 bp | ATTTGCTTATTCTGTGCTGTTAGTTTTTGTGTATGTGCCCGAGGCTATACATTTTTGGCCAGTAGATTTTaGTATACATTGTCTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ICLFCAVSFCVCARGYTFLASRF*YTLSNH Trigger: GTGGTTAGACAATGTATATCAAAATCTACTGGCCAA...AAATGTATAGCCTCGGGCACATACACAAAAACTAACAGCACAGAATAAGCAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000606789.1 |
||
| CDS-3UTR GCA 90 bp | ATTTGCTTATTCTGTGCTGTTAGTTTTTGTGTATGTGCCCGAGGCTATACATTTTACTTCAATTCTATCTaGCCATCAGATTGTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICLFCAVSFCVCARGYTFYFNSI*PSDCVP Trigger: TGGAACACAATCTGATGGGCAGATAGAATTGAAGTA...AAATGTATAGCCTCGGGCACATACACAAAAACTAACAGCACAGAATAAGCAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606789.1 |
||
| CDS CCA 90 bp | CGCCCACGCCGCAGCTGGGACTCGGGAGAGGCTAGGGGGACCGCGTaGCCTTGCTGTGGAAGGGACCCGCGCGGGCCCGCCGCGAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPRRSWDSGEARGTA*PCCGRDPRGPAAKG Trigger: CCCCTTCGCGGCGGGCCCGCGCGGGTCCCTTCCACAGCAAGGCCACGCGGTCCCCCTAGCCTCTCCCGAGTCCCAGCTGCGGCGTGGGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
||
| CDS CCA 90 bp | AGGACGCGTCCACGAGTCCCGATGGGAACGCGCCCACGCCGCAGCTaGGACTCGGGAGAGGCTAGGGGGACCGCGTGGCCTTGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RTRPRVPMGTRPRRS*DSGEARGTAWPCCG Trigger: TCCACAGCAAGGCCACGCGGTCCCCCTAGCCTCTCCCGAGTCCCAGCTGCGGCGTGGGCGCGTTCCCATCGGGACTCGTGGACGCGTCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
||
| CDS CCA 90 bp | CTAGACGAAAGGCAGCTGGGAGCAGGACGCGTCCACGAGTCCCGATaGGAACGCGCCCACGCCGCAGCTGGGACTCGGGAGAGGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDERQLGAGRVHESR*ERAHAAAGTRERLG Trigger: CCCTAGCCTCTCCCGAGTCCCAGCTGCGGCGTGGGCGCGTTCCCATCGGGACTCGTGGACGCGTCCTGCTCCCAGCTGCCTTTCGTCTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449152.1 |
||
| CDS GCA 90 bp | TGCATCACTGCTTCCTCTCCTTGGAGCCACCTGGCCGAACATCGCTaGCGCCCGCCCACAGAGCATCCGGCCACATTTTTCTGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CITASSPWSHLAEHR*RPPTEHPATFFCLQ Trigger: CTGCAGACAGAAAAATGTGGCCGGATGCTCTGTGGGCGGGCGGCAGCGATGTTCGGCCAGGTGGCTCCAAGGAGAGGAAGCAGTGATGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409228.5 ENST00000420683.1 |
||
| CDS CCA 90 bp | GTTTACTCCCTCAATGCATCACTGCTTCCTCTCCTTGGAGCCACCTaGCCGAACATCGCTGCCGCCCGCCCACAGAGCATCCGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: VYSLNASLLPLLGAT*PNIAAARPQSIRPH Trigger: ATGTGGCCGGATGCTCTGTGGGCGGGCGGCAGCGATGTTCGGCCAGGTGGCTCCAAGGAGAGGAAGCAGTGATGCATTGAGGGAGTAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420683.1 |
||
| CDS CCA 90 bp | AGTTCTCTAGCTCCAGCCGGGCGAGGCGCCAGGGAGCTCCGAACGTaGCAGGATCCACTTTTACTTTTCCAGACAAGGGCCGACGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLAPAGRGARELRT*QDPLLLFQTRADGC Trigger: ACAACCGTCGGCCCTTGTCTGGAAAAGTAAAAGTGGATCCTGCCACGTTCGGAGCTCCCTGGCGCCTCGCCCGGCTGGAGCTAGAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS CCA 90 bp | CCGATTCCATGTTTACTCCCTCAATGCATCACTGCTTCCTCTCCTTaGAGCCACCTGGCCGAACATCGCTGCCGCCCGCCCACAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PIPCLLPQCITASSP*SHLAEHRCRPPTEH Trigger: ATGCTCTGTGGGCGGGCGGCAGCGATGTTCGGCCAGGTGGCTCCAAGGAGAGGAAGCAGTGATGCATTGAGGGAGTAAACATGGAATCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420683.1 |
||
| CDS TCA 90 bp | TTTTCCAGACAAGGGCCGACGGTTGTGACCTGGCTTCTCGTGAAGTaGCTCCTGGCGACAGCAGCGGAGAGGACTACCGAAGCTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSRQGPTVVTWLLVK*LLATAAERTTEACS Trigger: ACTGCAAGCTTCGGTAGTCCTCTCCGCTGCTGTCGCCAGGAGTCACTTCACGAGAAGCCAGGTCACAACCGTCGGCCCTTGTCTGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS GCA 90 bp | ATCGCTGCCGCCCGCCCACAGAGCATCCGGCCACATTTTTCTGTCTaGAGTTTTCCTCTCCCAGGTGTCTACCACACGTTATTTAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: IAAARPQSIRPHFSV*SFPLPGVYHTLFKV Trigger: AACCTTAAATAACGTGTGGTAGACACCTGGGAGAGGAAAACTGCAGACAGAAAAATGTGGCCGGATGCTCTGTGGGCGGGCGGCAGCGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409228.5 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCACACGGGGACAAGACTTaGCCAATTCAAGCACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAHGDKT*PIQAQQ Trigger: TTGCTGTGCTTGAATTGGCAAAGTCTTGTCCCCGTG...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS GCA 90 bp | CGGCAATCAAATCTCCTCCTCGACATGTTAGGTGATTCCCAGGTCTaGTTCTTTAGTCACTTATTTTTACCGCTCCGGCCGCCGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RQSNLLLDMLGDSQV*FFSHLFLPLRPPQV Trigger: AACCTGCGGCGGCCGGAGCGGTAAAAATAAGTGACTAAAGAAGCAGACCTGGGAATCACCTAACATGTCGAGGAGGAGATTTGATTGCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAAGAATGATCCTGAGTTaGAGAGGAACTGGAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLHWSQQKTTMRGHSARMILS*RGTGSF Trigger: GAAACTTCCAGTTCCTCTCAAACTCAGGATCATTCT...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | CCTAGTCTCTTGCATTGGTCCCAGCAAAAGACCACAATGAGGGGCCACTCTGCAGAGGATTTAGAAGTCTaGTCTTCAGAGGACCTTACA | + |
|
Preference number: 5 (lower is better) Translates to: PSLLHWSQQKTTMRGHSAEDLEV*SSEDLT Trigger: TGTAAGGTCCTCTGAAGACAAGACTTCTAAATCCTC...TGCAGAGTGGCCCCTCATTGTGGTCTTTTGCTGGGACCAATGCAAGAGACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCATGATCACATCAGTCTaGCTACCGCTGACTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFMITSV*LPLTRA Trigger: TGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCAT...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS GCA 90 bp | CGGCAATCAAATCTCCTCCTCGACATGTTAGGTGATTCCCAGGTCTaGTTCTTTAGTCACTTATTTTTACCACATGTGGCCAGGGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RQSNLLLDMLGDSQV*FFSHLFLPHVAREG Trigger: ACCTTCCCTGGCCACATGTGGTAAAAATAAGTGACTAAAGAAGCAGACCTGGGAATCACCTAACATGTCGAGGAGGAGATTTGATTGCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420683.1 |
||
| CDS-3UTR CAA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTACAGATCTCAAGTAGGTaGGGAGGAGGAAAAAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VMFYDHISLATADSGTVLQISSR*GGGKRH Trigger: ATGTCTTTTTCCTCCTCCCAACCTACTTGAGATCTG...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS GCA 90 bp | CGGCAATCAAATCTCCTCCTCGACATGTTAGGTGATTCCCAGGTCTaGTTCTTTAGTCACTTATTTTTACCTCAATGCATCACTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQSNLLLDMLGDSQV*FFSHLFLPQCITAS Trigger: GGAAGCAGTGATGCATTGAGGTAAAAATAAGTGACTAAAGAAGCAGACCTGGGAATCACCTAACATGTCGAGGAGGAGATTTGATTGCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409228.5 |
||
| CDS GCA 90 bp | GGGGATTGGGTAATGAGTCATCGAAACGAAATCTTTTGGAAACCATaGTGCTATCCTCTGGGATATTCTCTTTGTCTTCTCTATCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GDWVMSHRNEIFWKP*CYPLGYSLCLLYHH Trigger: GTGGTGATAGAGAAGACAAAGAGAATATCCCAGAGGATAGCAGCATGGTTTCCAAAAGATTTCGTTTCGATGACTCATTACCCAATCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
||
| CDS CCA 90 bp | TGTCTTCAGAGGACCTTACAGAATGATCCTGAGTTTGAGAGGAACTaGAAGTTTCTTCAGGGTGAAACAAGTTTTCAAAGTCCCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: CLQRTLQNDPEFERN*KFLQGETSFQSPTA Trigger: AGCAGTGGGACTTTGAAAACTTGTTTCACCCTGAAGAAACTTCCAGTTCCTCTCAAACTCAGGATCATTCTGTAAGGTCCTCTGAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
||
| CDS-3UTR CAA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCTCGAAACGAAATCTTTaGGAAACCATGCTGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFSKRNL*ETMLLS Trigger: GGATAGCAGCATGGTTTCCAAAAGATTTCGTTTCGA...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | GTCATGTTTTATGATCACATCAGTCTTGCTACCGCTGACTCGGGCACTGTGTTAGGGAACATCAGGTTGTaGTTACCATTTGTCAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: VMFYDHISLATADSGTVLGNIRL*LPFVKL Trigger: TAGTTTGACAAATGGTAACAACAACCTGATGTTCCC...TAACACAGTGCCCGAGTCAGCGGTAGCAAGACTGATGTGATCATAAAACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | TCATGTGTTCAAGTGTTACTGACATTTGTCCACTCACAGGGGCTCTCTAGATTCTGCAAGAGATCTAGGTaGCATGCTCCTTATGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SCVQVLLTFVHSQGLSRFCKRSR*HAPYEN Trigger: ATTCTCATAAGGAGCATGCAACCTAGATCTCTTGCA...GAATCTAGAGAGCCCCTGTGAGTGGACAAATGTCAGTAACACTTGAACACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | TATTCTGTGCTGTTAGTTTTTGTGTATGTGCCCGAGGCTATACATTTAGTCTTACACGGGGACAAGACTTaGCCAATTCAAGCACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YSVLLVFVYVPEAIHLVLHGDKT*PIQAQQ Trigger: TTGCTGTGCTTGAATTGGCAAAGTCTTGTCCCCGTG...TAAGACTAAATGTATAGCCTCGGGCACATACACAAAAACTAACAGCACAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000606789.1 |
||
| CDS-3UTR CAA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGACAAGTTCATGGGGATaGGGTAATGAGTCATCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LYTCIPNISIFQTLSDLKTSSWG*GNESSK Trigger: TTTCGATGACTCATTACCCAATCCCCATGAACTTGT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | CTCTACACTTGCATACCAAATATCTCCATCTTCCAGACCTTATCAGATCTCAAGATATTTCTTGATTTTTaGGGGGATGGCATGATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYTCIPNISIFQTLSDLKIFLDF*GDGMIP Trigger: AGGAATCATGCCATCCCCCAAAAAATCAAGAAATAT...CTTGAGATCTGATAAGGTCTGGAAGATGGAGATATTTGGTATGCAAGTGTAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000263955.9 |
||
| CDS-3UTR CAA 90 bp | TATTCTGTGCTGTTAGTTTTTGTGTATGTGCCCGAGGCTATACATTTAGTCTTATATCTGCCCATCAGATaGTGTTCCAGAAAAATTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YSVLLVFVYVPEAIHLVLYLPIR*CSRKIQ Trigger: TTGAATTTTTCTGGAACACAATCTGATGGGCAGATA...TAAGACTAAATGTATAGCCTCGGGCACATACACAAAAACTAACAGCACAGAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000606789.1 |
||
| CDS CCA 72 bp | CGCAGCTGGGACTCGGGAGAGGCTAGGGGGACCGCGTaGCCTTGCTGTGGAAGGGACCCGCGCGGGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSWDSGEARGTA*PCCGRDPRGPA Trigger: GGCGGGCCCGCGCGGGTCCCTTCCACAGCAAGGCCACGCGGTCCCCCTAGCCTCTCCCGAGTCCCAGCTGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
||
| CDS GCA 72 bp | TGGGACTCGGGAGAGGCTAGGGGGACCGCGTGGCCTTaGTGTGGAAGGGACCCGCGCGGGCCCGCCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WDSGEARGTAWP*CGRDPRGPAAK Trigger: CTTCGCGGCGGGCCCGCGCGGGTCCCTTCCACAGCAAGGCCACGCGGTCCCCCTAGCCTCTCCCGAGTCCCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
||
| CDS CCA 72 bp | CCACGAGTCCCGATGGGAACGCGCCCACGCCGCAGCTaGGACTCGGGAGAGGCTAGGGGGACCGCGTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRVPMGTRPRRS*DSGEARGTAWP Trigger: AGGCCACGCGGTCCCCCTAGCCTCTCCCGAGTCCCAGCTGCGGCGTGGGCGCGTTCCCATCGGGACTCGTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
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| CDS CCA 72 bp | AGGCAGCTGGGAGCAGGACGCGTCCACGAGTCCCGATaGGAACGCGCCCACGCCGCAGCTGGGACTCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RQLGAGRVHESR*ERAHAAAGTRE Trigger: CTCCCGAGTCCCAGCTGCGGCGTGGGCGCGTTCCCATCGGGACTCGTGGACGCGTCCTGCTCCCAGCTGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449152.1 |
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| CDS GCA 72 bp | GCTTCCTCTCCTTGGAGCCACCTGGCCGAACATCGCTaGCGCCCGCCCACAGAGCATCCGGCCACATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASSPWSHLAEHR*RPPTEHPATFF Trigger: GAAAAATGTGGCCGGATGCTCTGTGGGCGGGCGGCAGCGATGTTCGGCCAGGTGGCTCCAAGGAGAGGAAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409228.5 ENST00000420683.1 |
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| CDS CCA 72 bp | CTCAATGCATCACTGCTTCCTCTCCTTGGAGCCACCTaGCCGAACATCGCTGCCGCCCGCCCACAGAGCATC | + |
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Preference number: 6 (lower is better) Translates to: LNASLLPLLGAT*PNIAAARPQSI Trigger: GATGCTCTGTGGGCGGGCGGCAGCGATGTTCGGCCAGGTGGCTCCAAGGAGAGGAAGCAGTGATGCATTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000409228.5 ENST00000420683.1 |
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| CDS TCA 72 bp | CAAGGGCCGACGGTTGTGACCTGGCTTCTCGTGAAGTaGCTCCTGGCGACAGCAGCGGAGAGGACTACCGAA | + |
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Preference number: 6 (lower is better) Translates to: QGPTVVTWLLVK*LLATAAERTTE Trigger: TTCGGTAGTCCTCTCCGCTGCTGTCGCCAGGAGTCACTTCACGAGAAGCCAGGTCACAACCGTCGGCCCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS CCA 72 bp | TTATTTTTACCTCAATGCATCACTGCTTCCTCTCCTTaGAGCCACCTGGCCGAACATCGCTGCCGCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: LFLPQCITASSP*SHLAEHRCRPP Trigger: GGGCGGGCGGCAGCGATGTTCGGCCAGGTGGCTCCAAGGAGAGGAAGCAGTGATGCATTGAGGTAAAAATAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409228.5 |
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| CDS GCA 72 bp | GCCCGCCCACAGAGCATCCGGCCACATTTTTCTGTCTaGAGTTTTCCTCTCCCAGGTGTCTACCACACGTTA | + |
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Preference number: 6 (lower is better) Translates to: ARPQSIRPHFSV*SFPLPGVYHTL Trigger: TAACGTGTGGTAGACACCTGGGAGAGGAAAACTGCAGACAGAAAAATGTGGCCGGATGCTCTGTGGGCGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409228.5 |
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| CDS TCA 72 bp | TCCTCTCCTTTGGCCAGTTTTGCATATAGTGGAGCATaGATGTCACCTTTGTCCACCAAGCCCTCCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSPLASFAYSGA*MSPLSTKPSSN Trigger: GTTTGAGGAGGGCTTGGTGGACAAAGGTGACATTCATGCTCCACTATATGCAAAACTGGCCAAAGGAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449152.1 |
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| CDS GCA 72 bp | AATCTCCTCCTCGACATGTTAGGTGATTCCCAGGTCTaGTTCTTTAGTCACTTATTTTTACCGCTCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: NLLLDMLGDSQV*FFSHLFLPLRP Trigger: CGGCCGGAGCGGTAAAAATAAGTGACTAAAGAAGCAGACCTGGGAATCACCTAACATGTCGAGGAGGAGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000263955.9 |
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| CDS CAA 90 bp | TGTCAGAGCCAAGATATTTTTCCATTTCCTCTCCTTTGGCCAGTTTaGCATATAGTGGAGCATGAATGTCACCTTTGTCCACCAAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: CQSQDIFPFPLLWPV*HIVEHECHLCPPSP Trigger: AGGGCTTGGTGGACAAAGGTGACATTCATGCTCCACTATATGCAAAACTGGCCAAAGGAGAGGAAATGGAAAAATATCTTGGCTCTGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
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| CDS CAA 72 bp | TTGGAAACCATGCTGCTATCCTCTGGGATATTCTCTTaGTCTTCTCTATCACCACAGGTTCCATTACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LETMLLSSGIFS*SSLSPQVPLQE Trigger: CTCCTGTAATGGAACCTGTGGTGATAGAGAAGACAAAGAGAATATCCCAGAGGATAGCAGCATGGTTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
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| CDS CAA 72 bp | CTTGTCTTCAGAGGACCTTACAGAATGATCCTGAGTTaGAGAGGAACTGGAAGTTTCTTCAGGGTGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: LVFRGPYRMILS*RGTGSFFRVKQ Trigger: TTGTTTCACCCTGAAGAAACTTCCAGTTCCTCTCAAACTCAGGATCATTCTGTAAGGTCCTCTGAAGACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
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| CDS TCA 72 bp | CAGAAACCATTTCAGCCAACTCAGGTAAACACAGGCTaGAAATTTCTCCACCTGCAGCATATTCCAATATCA | + |
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Preference number: 6 (lower is better) Translates to: QKPFQPTQVNTG*KFLHLQHIPIS Trigger: TGATATTGGAATATGCTGCAGGTGGAGAAATTTTCAGCCTGTGTTTACCTGAGTTGGCTGAAATGGTTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
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| CDS GCA 72 bp | TCTGGTGTTCCCATGATTTCCCGAAGTTCACACGCATaGCCTATTTTTCGAGACATTCCAAAATCTACTATT | + |
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Preference number: 6 (lower is better) Translates to: SGVPMISRSSHA*PIFRDIPKSTI Trigger: AATAGTAGATTTTGGAATGTCTCGAAAAATAGGGCATGCGTGTGAACTTCGGGAAATCATGGGAACACCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
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| CDS GCA 72 bp | AATCTCCTCCTCGACATGTTAGGTGATTCCCAGGTCTaGTTCTTTAGTCACTTATTTTTACCCAATTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: NLLLDMLGDSQV*FFSHLFLPNSD Trigger: GTCTGAATTGGGTAAAAATAAGTGACTAAAGAAGCAGACCTGGGAATCACCTAACATGTCGAGGAGGAGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449152.1 |
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| CDS CAA 90 bp | CGAAATCTTTTGGAAACCATGCTGCTATCCTCTGGGATATTCTCTTaGTCTTCTCTATCACCACAGGTTCCATTACAGGAGGATTTAGAA | + |
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Preference number: 6 (lower is better) Translates to: RNLLETMLLSSGIFS*SSLSPQVPLQEDLE Trigger: TTCTAAATCCTCCTGTAATGGAACCTGTGGTGATAGAGAAGACAAAGAGAATATCCCAGAGGATAGCAGCATGGTTTCCAAAAGATTTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
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| CDS CAA 72 bp | TTCCTCTCCCAGGTGTCTACCACACGTTATTTAAGGTaGTGCTTCAGAGAATCCTTTATATTTGCAAACCAA | + |
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Preference number: 6 (lower is better) Translates to: FLSQVSTTRYLR*CFRESFIFANQ Trigger: TTGGTTTGCAAATATAAAGGATTCTCTGAAGCACAACCTTAAATAACGTGTGGTAGACACCTGGGAGAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409228.5 |
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| CDS CAA 90 bp | TTTAGAAGTCTTGTCTTCAGAGGACCTTACAGAATGATCCTGAGTTaGAGAGGAACTGGAAGTTTCTTCAGGGTGAAACAAGTTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FRSLVFRGPYRMILS*RGTGSFFRVKQVFK Trigger: TTTGAAAACTTGTTTCACCCTGAAGAAACTTCCAGTTCCTCTCAAACTCAGGATCATTCTGTAAGGTCCTCTGAAGACAAGACTTCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000263955.9 ENST00000409228.5 |
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| CDS GCA 72 bp | CTCTCCCAGGTGTCTACCACACGTTATTTAAGGTTGTaGTTCAGAGAATCCTTTATATTTGCAAACCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: LSQVSTTRYLRL*FRESFIFANQN Trigger: ATTTTGGTTTGCAAATATAAAGGATTCTCTGAAGCACAACCTTAAATAACGTGTGGTAGACACCTGGGAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409228.5 |
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