RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK16 (Homo sapiens)

Ensembl gene IDs: ENSG00000115661

Ensembl transcript IDs: ENST00000396738.7, ENST00000409260.5, ENST00000409516.7, ENST00000409638.7, ENST00000409743.1, ENST00000461417.5, ENST00000475342.5, ENST00000475696.5, ENST00000478018.5, ENST00000496443.5, ENST00000496800.5

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTaGGGCTGGGCTGGCCCAGAGTTCCTGGGCATGGAGCCACGTCAT +
Preference number: 1 (lower is better)
Translates to: QGLAQAPLCIMRVWE*GWAGPEFLGMEPRH
Trigger: ATGACGTGGCTCCATGCCCAGGAACTCTGGGCCAGCCCAGCCCCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR CCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTaGGAGTGGGGCTGGGCTGGCCCAGAGTTCCTGGGCATGGAGCCA +
Preference number: 1 (lower is better)
Translates to: WKQGLAQAPLCIMRV*EWGWAGPEFLGMEP
Trigger: TGGCTCCATGCCCAGGAACTCTGGGCCAGCCCAGCCCCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 90 bp ACCAACTCTGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATaGGGGTTTGGGAGTGGGGCTGGGCTGGCCCAGAGTTCCTGGGCA +
Preference number: 1 (lower is better)
Translates to: TNSGSKAWPRLLCAL*GFGSGAGLAQSSWA
Trigger: TGCCCAGGAACTCTGGGCCAGCCCAGCCCCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGAGTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR GCA 90 bp TTGCTGTTCATGACCCTTATCCCTTCCATCGCTGAAGGTGAGACCTaGAAAGGGGTTCTTGCCAGGCCCAGGAAGCATAACCCCAGGGAC +
Preference number: 1 (lower is better)
Translates to: LLFMTLIPSIAEGET*KGVLARPRKHNPRD
Trigger: GTCCCTGGGGTTATGCTTCCTGGGCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGGTCATGAACAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR GCA 90 bp TGGTTTCTGTCTTTGAAAGTTAGACTGCTACCCTGTTCTTCCTGCTaGCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: WFLSLKVRLLPCSSC*LYIYQLWKQGLAQA
Trigger: AGCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAACAGGGTAGCAGTCTAACTTTCAAAGACAGAAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR GCA 90 bp CAGTGGTTTCTGTCTTTGAAAGTTAGACTGCTACCCTGTTCTTCCTaGTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: QWFLSLKVRLLPCSS*CLYIYQLWKQGLAQ
Trigger: CTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAACAGGGTAGCAGTCTAACTTTCAAAGACAGAAACCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 90 bp AGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTGTTGAAGGATaGGTCTTCAGCTCCTTTCCAAGTAGGAGTATAATCCAGTGGTTT +
Preference number: 1 (lower is better)
Translates to: REEMRTKIQAQTVEG*VFSSFPSRSIIQWF
Trigger: AAACCACTGGATTATACTCCTACTTGGAAAGGAGCTGAAGACTCATCCTTCAACAGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR CAA 90 bp CTGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTaGGGAGTGGGGCTGGGCTGGCCCAGAGTTCCTGGGCATGGAGCC +
Preference number: 2 (lower is better)
Translates to: LEARLGPGSSVHYEG*GVGLGWPRVPGHGA
Trigger: GGCTCCATGCCCAGGAACTCTGGGCCAGCCCAGCCCCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR GCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCCCTGTCTTGCTGCTTTaGTGGAGCTGGGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGPVLLL*WSWGCA
Trigger: GGCACAGCCCCAGCTCCAGCAAAGCAGCAAGACAGG...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR GCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCTGCCAACCCTGCCCTTaGCTTTCCTCCCTGGTGATT +
Preference number: 2 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGCQPCP*LSSLVI
Trigger: AATCACCAGGGAGGAAAGGCAAGGGCAGGGTTGGCA...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGAGCTTCCTGTCTTGCTaGTTTGCTGGAGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWSFLSC*FAGAGA
Trigger: AGCCCCAGCTCCAGCAAAGCAGCAAGACAGGAAGCT...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCCATAAGCTTGGGGGATaGGAGGGAACACAGGCGATC +
Preference number: 2 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGHKLGG*EGTQAI
Trigger: GATCGCCTGTGTTCCCTCCCATCCCCCAAGCTTATG...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR GCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCCCTTGCCCAGGTTTTaGTCTTGGAGGGAAGAAAGC +
Preference number: 2 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLPLPRF*SWREES
Trigger: GCTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR CAA 90 bp TGTTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTaGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: CSSCCLYIYQLWKQG*AQAPLCIMRVWEWG
Trigger: GCCCCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR TCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCGAAAAGATGCAGGACTaGGATGATTGTCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGEKMQD*DDCPDP
Trigger: GGGGTCAGGACAATCATCTCAGTCCTGCATCTTTTC...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CCA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCCTCCTGCTAGGGCCCTaGGGAAAGCTTCAACTTTGC +
Preference number: 2 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGLLLGP*GKLQLC
Trigger: GCAAAGTTGAAGCTTTCCCCAGGGCCCTAGCAGGAG...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCTGCTTTGCTGGAGCTaGGGCTGTGCCATTAAAAGT +
Preference number: 2 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWLLCWS*GCAIKS
Trigger: ACTTTTAATGGCACAGCCCCAGCTCCAGCAAAGCAG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR TCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCTACTCACCCCAGGAGTaGAGGAAGGAAAGAACTAGT +
Preference number: 2 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLYSPQE*RKERTS
Trigger: ACTAGTTCTTTCCTTCCTTCACTCCTGGGGTGAGTA...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR GCA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCCTCAGTAAGTCCCCTTaGCCAGGTTTTGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGLSKSP*PGFALG
Trigger: TCCAAGAGCAAAACCTGGGCAAGGGGACTTACTGAG...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR GCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTCAAAAGAGCAGGAGATaGCAACCCTGCCCTTGCCTT +
Preference number: 2 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTQKSRR*QPCPCL
Trigger: AAGGCAAGGGCAGGGTTGGCATCTCCTGCTCTTTTG...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR CAA 90 bp TTCAGCTCCTTTCCAAGTAGGAGTATAATCCAGTGGTTTCTGTCTTaGAAAGTTAGACTGCTACCCTGTTCTTCCTGCTGCCTCTACATT +
Preference number: 2 (lower is better)
Translates to: FSSFPSRSIIQWFLS*KVRLLPCSSCCLYI
Trigger: AATGTAGAGGCAGCAGGAAGAACAGGGTAGCAGTCTAACTTTCAAAGACAGAAACCACTGGATTATACTCCTACTTGGAAAGGAGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CAA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCGGCGATCTCCTAGAGTaGTTTGTGCCACTGCACCTC +
Preference number: 3 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGGDLLE*FVPLHL
Trigger: GAGGTGCAGTGGCACAAACAACTCTAGGAGATCGCC...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CAA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCGTGCATTATGAGGGTTaGGGAGTGGGGCTGGGCTGG +
Preference number: 3 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGVHYEG*GVGLGW
Trigger: CCAGCCCAGCCCCACTCCCAAACCCTCATAATGCAC...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CAA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCCCCCTTGCCCAGGTTTaGCTCTTGGAGGGAAGAAAG +
Preference number: 3 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGPLAQV*LLEGRK
Trigger: CTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGGG...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 72 bp ATTCAGGGAACAGAGCCCTTCCCTAGGGAACAGGTTTaGAGCCCAGCTAAGACAGGGCCCCTGTTTACTCAG +
Preference number: 3 (lower is better)
Translates to: IQGTEPFPREQV*SPAKTGPLFTQ
Trigger: CTGAGTAAACAGGGGCCCTGTCTTAGCTGGGCTTCAAACCTGTTCCCTAGGGAAGGGCTCTGTTCCCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR-3UTR CAA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTAGCCACGTCATAAGCTaGGGGGATGGGAGGGAACAC +
Preference number: 3 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTSHVIS*GDGREH
Trigger: GTGTTCCCTCCCATCCCCCAAGCTTATGACGTGGCT...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 72 bp CCAGGCCCAGGAAGCATAACCCCAGGGACTTTAAATTaGAGTCCTAGGGTTACTCAGTATAGGGAGGAAATG +
Preference number: 3 (lower is better)
Translates to: PGPGSITPGTLN*SPRVTQYREEM
Trigger: CATTTCCTCCCTATACTGAGTAACCCTAGGACTTCAATTTAAAGTCCCTGGGGTTATGCTTCCTGGGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 72 bp AATAAACAGTTTCCTTGCACGGTTTCTTGTTCCCTCTaGGTGCTTGAGCTTCTGCTGCCTTCCCCTTCATGC +
Preference number: 3 (lower is better)
Translates to: NKQFPCTVSCSL*VLELLLPSPSC
Trigger: GCATGAAGGGGAAGGCAGCAGAAGCTCAAGCACTCAGAGGGAACAAGAAACCGTGCAAGGAAACTGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR GCA 72 bp CTGTCTTTGAAAGTTAGACTGCTACCCTGTTCTTCCTaGTGCCTCTACATTTACCAACTCTGGAAGCAAGGC +
Preference number: 3 (lower is better)
Translates to: LSLKVRLLPCSS*CLYIYQLWKQG
Trigger: GCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAACAGGGTAGCAGTCTAACTTTCAAAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR GCA 72 bp TCTTTGAAAGTTAGACTGCTACCCTGTTCTTCCTGCTaGCTCTACATTTACCAACTCTGGAAGCAAGGCTTG +
Preference number: 3 (lower is better)
Translates to: SLKVRLLPCSSC*LYIYQLWKQGL
Trigger: CAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAACAGGGTAGCAGTCTAACTTTCAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 72 bp ATGAGGACCAAAATCCAGGCACAAACTGTTGAAGGATaGGTCTTCAGCTCCTTTCCAAGTAGGAGTATAATC +
Preference number: 3 (lower is better)
Translates to: MRTKIQAQTVEG*VFSSFPSRSII
Trigger: GATTATACTCCTACTTGGAAAGGAGCTGAAGACTCATCCTTCAACAGTTTGTGCCTGGATTTTGGTCCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR TCA 72 bp ATTGAAGTCCTAGGGTTACTCAGTATAGGGAGGAAATaGGGACCAAAATCCAGGCACAAACTGTTGAAGGAT +
Preference number: 3 (lower is better)
Translates to: IEVLGLLSIGRK*GPKSRHKLLKD
Trigger: ATCCTTCAACAGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGGACTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCGCTCAGGCCCACTCCTaGCAGGGCCCACCCCGGTCT +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGAQAHS*QGPPRS
Trigger: AGACCGGGGTGGGCCCTGCCAGGAGTGGGCCTGAGC...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR CCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWGLGRR*CTAGLP
Trigger: GGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCC...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCGGCTCTTCCAGGAGATaGGCTGGGGGCCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSGSSRR*AGGPAD
Trigger: ATCCGCTGGGCCCCCAGCGCATCTCCTGGAAGAGCC...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCCAAAACAGCTGCCGCTaGCACCTCCACTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGQNSCR*HLHSPR
Trigger: GCGAGGGGAGTGGAGGTGGCAGCGGCAGCTGTTTTG...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCACTGCCGGACTGACCTaGCTCGGGCCAGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGTAGLT*LGPERS
Trigger: GCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGT...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR CCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGCAGGGTCAGAGCCTaGCGGGAGCCCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGCRVRA*REPSTW
Trigger: CCATGTGGAGGGCTCCCGCCAGGCTCTGACCCTGCA...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCTGCAGGGTCAGAGCCTaGCGGGAGCCCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSCRVRA*REPSTW
Trigger: CCATGTGGAGGGCTCCCGCCAGGCTCTGACCCTGCA...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATGACCGGAAGCAGTGCTaGCATCATCAGTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDDRKQC*HHQSAP
Trigger: CGGCGCGGACTGATGATGTCAGCACTGCTTCCGGTC...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409638.7
CDS-3UTR GCA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCGGCTCTTCCAGGAGATaGGCTGGGGGCCCAGCGGAT +
Preference number: 4 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGGSSRR*AGGPAD
Trigger: ATCCGCTGGGCCCCCAGCGCATCTCCTGGAAGAGCC...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTGGCCTCAAGGCCTCTaGAGATCCCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDWPQGL*RSPAAA
Trigger: GGCTGCTGCTGGGGATCTGCAGAGGCCTTGAGGCCA...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATTGGGCTGCCCAGTCCTaGAGGGTCAGAGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNWAAQS*RVRAWR
Trigger: CCGCCAGGCTCTGACCCTGCAGGACTGGGCAGCCCA...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCCGCCAGCTTCAGGGGTaGGGTCAGGCGCCTTACGGC +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSRQLQG*GQAPYG
Trigger: GCCGTAAGGCGCCTGACCCCACCCCTGAAGCTGGCG...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR CCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSGLGRR*CTAGLP
Trigger: GGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCC...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNGLGRR*CTAGLP
Trigger: GGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCC...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTTCCAGGAGATGCGCTaGGGGCCCAGCGGATCATGC +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDFQEMR*GPSGSC
Trigger: GCATGATCCGCTGGGCCCCCAGCGCATCTCCTGGAA...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCCTGAAATGGCAACCTaGCTTTGGGCCCCTTGCACC +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLPEMAT*LWAPCT
Trigger: GGTGCAAGGGGCCCAAAGTCAGGTTGCCATTTCAGG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCCCGGCTAGGCAGCTTTaGCTAAGCTACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGPARQL*LSYSPQ
Trigger: CTGGGGTGAGTAGCTTAGTCAAAGCTGCCTAGCCGG...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTATGGGCCATCTGCACTaGCGGACTGACCTGGCTCGG +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGMGHLH*RTDLAR
Trigger: CCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCAT...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR GCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCAGAGAAAACAGGCCCTaGTCCGTCGCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGRENRP*SVASFR
Trigger: CCTGAAGCTGGCGACGGAGCAGGGCCTGTTTTCTCT...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGTGGGCTGCCCAGTCCTaGAGGGTCAGAGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWWAAQS*RVRAWR
Trigger: CCGCCAGGCTCTGACCCTGCAGGACTGGGCAGCCCA...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCATGGGCTGCCCAGTCCTaGAGGGTCAGAGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPWAAQS*RVRAWR
Trigger: CCGCCAGGCTCTGACCCTGCAGGACTGGGCAGCCCA...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTGGGCTGCCCAGTCCTaGAGGGTCAGAGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLWAAQS*RVRAWR
Trigger: CCGCCAGGCTCTGACCCTGCAGGACTGGGCAGCCCA...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCACAGGCCAAAACAGCTaGCGCTGCCACCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSTGQNS*RCHLHS
Trigger: GGAGTGGAGGTGGCAGCGGCAGCTGTTTTGGCCTGT...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGACAGGCCAAAACAGCTaGCGCTGCCACCTCCACTCC +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGTGQNS*RCHLHS
Trigger: GGAGTGGAGGTGGCAGCGGCAGCTGTTTTGGCCTGT...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCAGGAGATGCCAACCCTaGCCTTGCCTTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLRRCQP*PCLSSL
Trigger: CAGGGAGGAAAGGCAAGGGCAGGGTTGGCATCTCCT...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTGCCCAGAGCCCGGGATaGGCCATCTGCACTGCCGGA +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLAQSPG*AICTAG
Trigger: TCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGGC...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR CCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATTGCAGGGTCAGAGCCTaGCGGGAGCCCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNCRVRA*REPSTW
Trigger: CCATGTGGAGGGCTCCCGCCAGGCTCTGACCCTGCA...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWGLGRR*CTAGLP
Trigger: GGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCC...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCTGCATTATGAGGGTTTaGGAGTGGGGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLCIMRV*EWGWAG
Trigger: GCCAGCCCAGCCCCACTCCCAAACCCTCATAATGCA...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGTCTGGAAGCAAGGCTTaGCCCAGGCTCCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWSGSKA*PRLLCA
Trigger: TGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGA...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTCCCAGCGGATCATGCTaGCTCGGGCCAGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGPSGSC*LGPERS
Trigger: GCTTCTCTCTGGCCCGAGCCAGCATGATCCGCTGGG...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTTCTGCACTGCCGGACTaGCCTGGCTCGGGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPSALPD*PGSGQR
Trigger: TCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGA...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR TCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCTCTTCAAGGACGGTCTaGGGCTACCGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLSSRTV*GYRRAR
Trigger: ACGAGCTCTTCGGTAGCCTCAGACCGTCCTTGAAGA...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCTAGGTCCACATAGCTaGACCCACCCTCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSLGPHS*THPPPV
Trigger: AACTGGGGGAGGGTGGGTTCAGCTATGTGGACCTAG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396738.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCCGGCTAGGCAGCTTTaGCTAAGCTACTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSPARQL*LSYSPQ
Trigger: CTGGGGTGAGTAGCTTAGTCAAAGCTGCCTAGCCGG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCGTGCCACTGCACCTCTaGGCAGCTTTGCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLVPLHL*AALHSF
Trigger: GAAGCTATGCAAAGCTGCTCAGAGGTGCAGTGGCAC...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCTCCTCTGTGCATTATaGGGGTTTGGGAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWLLCAL*GFGSGA
Trigger: AGCCCCACTCCCAAACCCTCATAATGCACAGAGGAG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCCGGGATGGGCCATCTaGACTGCCGGACTGACCTGG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWPGWAI*TAGLTW
Trigger: CCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396738.7
CDS-3UTR GCA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATCAAAACAGCTGCCGCTaGCACCTCCACTCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNQNSCR*HLHSPR
Trigger: GCGAGGGGAGTGGAGGTGGCAGCGGCAGCTGTTTTG...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGGTGGCAGCTGGATACTaGCACACCACACTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWVAAGY*HTTLPH
Trigger: ATGAGGCAGTGTGGTGTGGCAGTATCCAGCTGCCAC...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCGCTGAAGGTGAGACCTaGAAAGGGGTTCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLAEGET*KGVLAR
Trigger: CCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGC...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTACGCAGCCTAGGGACTaGAGGGTCAGAGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPTQPRD*RVRAWR
Trigger: CCGCCAGGCTCTGACCCTGCAGTCCCTAGGCTGCGT...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409743.1
CDS-3UTR CCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTTGCAGGGTCAGAGCCTaGCGGGAGCCCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPCRVRA*REPSTW
Trigger: CCATGTGGAGGGCTCCCGCCAGGCTCTGACCCTGCA...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCATAAGCTTGGGGGATaGGAGGGAACACAGGCGATC +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLHKLGG*EGTQAI
Trigger: GATCGCCTGTGTTCCCTCCCATCCCCCAAGCTTATG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCTCTTCAAGGACGGTCTaGGGCTACCGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSSSRTV*GYRRAR
Trigger: ACGAGCTCTTCGGTAGCCTCAGACCGTCCTTGAAGA...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCTTCAAGGACGGTCTaGGGCTACCGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDSSRTV*GYRRAR
Trigger: ACGAGCTCTTCGGTAGCCTCAGACCGTCCTTGAAGA...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGGTGCCACTGCACCTCTaGGCAGCTTTGCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGVPLHL*AALHSF
Trigger: GAAGCTATGCAAAGCTGCTCAGAGGTGCAGTGGCAC...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAGCAGCCAGGCCTCATaGTTAGCACCCCGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSSSQAS*LAPRSL
Trigger: GAGGGAACGGGGTGCTAAGCATGAGGCCTGGCTGCT...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGAAGCAGCCAGGCCTCATaGTTAGCACCCCGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGSSQAS*LAPRSL
Trigger: GAGGGAACGGGGTGCTAAGCATGAGGCCTGGCTGCT...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATAGCAGCCAGGCCTCATaGTTAGCACCCCGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNSSQAS*LAPRSL
Trigger: GAGGGAACGGGGTGCTAAGCATGAGGCCTGGCTGCT...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTGGCCTCAAGGCCTCTaGAGATCCCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLWPQGL*RSPAAA
Trigger: GGCTGCTGCTGGGGATCTGCAGAGGCCTTGAGGCCA...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTTGGCCTCAAGGCCTCTaGAGATCCCCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPWPQGL*RSPAAA
Trigger: GGCTGCTGCTGGGGATCTGCAGAGGCCTTGAGGCCA...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCCCTTGCCCAGGTTTTaGTCTTGGAGGGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWPLPRF*SWREES
Trigger: GCTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCACCATTGCCGACTCTaGACCATTCCTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGHHCRL*TIPPSQ
Trigger: CTGGGAAGGAGGAATGGTGCAGAGTCGGCAATGGTG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCAAAAGAGCAGGAGATaGCAACCCTGCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWQKSRR*QPCPCL
Trigger: AAGGCAAGGGCAGGGTTGGCATCTCCTGCTCTTTTG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAACCTGTCTTGCTGCTTTaGTGGAGCTGGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREPVLLL*WSWGCA
Trigger: GGCACAGCCCCAGCTCCAGCAAAGCAGCAAGACAGG...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACCTGTCTTGCTGCTTTaGTGGAGCTGGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGPVLLL*WSWGCA
Trigger: GGCACAGCCCCAGCTCCAGCAAAGCAGCAAGACAGG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGGCCCAGGCTCCTCTGTaGATTATGAGGGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGAQAPL*IMRVWE
Trigger: CTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGC...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCATAAGCTTGGGGGATaGGAGGGAACACAGGCGATC +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGHKLGG*EGTQAI
Trigger: GATCGCCTGTGTTCCCTCCCATCCCCCAAGCTTATG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCTCTGGAAGCAAGGCTTaGCCCAGGCTCCTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGSGSKA*PRLLCA
Trigger: TGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGA...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCCAGCGGATCATGCTaGCTCGGGCCAGAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFPSGSC*LGPERS
Trigger: GCTTCTCTCTGGCCCGAGCCAGCATGATCCGCTGGG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCATTCCAGGAGATGCGCTaGGGGCCCAGCGGATCATGC +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPFQEMR*GPSGSC
Trigger: GCATGATCCGCTGGGCCCCCAGCGCATCTCCTGGAA...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTTTCCAGGAGATGCGCTaGGGGCCCAGCGGATCATGC +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFFQEMR*GPSGSC
Trigger: GCATGATCCGCTGGGCCCCCAGCGCATCTCCTGGAA...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTTCTTCAAGGACGGTCTaGGGCTACCGAAGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGSSRTV*GYRRAR
Trigger: ACGAGCTCTTCGGTAGCCTCAGACCGTCCTTGAAGA...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCCCCCAGTTTCTGGATaGAGAGGTAGCGCTTATTGT +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWPPVSG*RGSAYC
Trigger: ACAATAAGCGCTACCTCTTCATCCAGAAACTGGGGG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATCCTGAAATGGCAACCTaGCTTTGGGCCCCTTGCACC +
Preference number: 4 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNPEMAT*LWAPCT
Trigger: GGTGCAAGGGGCCCAAAGTCAGGTTGCCATTTCAGG...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCCAGGCACAAACTGTTaGAGGATGAGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLPGTNC*RMSLQL
Trigger: GAGCTGAAGACTCATCCTTCAACAGTTTGTGCCTGG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCCAGGCACAAACTGTTaGAGGATGAGTCTTCAGCTC +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWPGTNC*RMSLQL
Trigger: GAGCTGAAGACTCATCCTTCAACAGTTTGTGCCTGG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATTTCCCTCTGAGTGCTTaGGCTTCTGCTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNFPLSA*ASAAFP
Trigger: GGGGAAGGCAGCAGAAGCTCAAGCACTCAGAGGGAA...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAAGCAGCCAGGCCTCATaGTTAGCACCCCGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPSSQAS*LAPRSL
Trigger: GAGGGAACGGGGTGCTAAGCATGAGGCCTGGCTGCT...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATCGCAATGCTGAAGAATaGCTGGGGCTTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDRNAEE*LGLCGM
Trigger: CATCCCACAAAGCCCCAGGCATTCTTCAGCATTGCG...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCTCAGTAAGTCCCCTTaGCCAGGTTTTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWLSKSP*PGFALG
Trigger: TCCAAGAGCAAAACCTGGGCAAGGGGACTTACTGAG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCAAAAGAGCAGGAGATaGCAACCCTGCCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGQKSRR*QPCPCL
Trigger: AAGGCAAGGGCAGGGTTGGCATCTCCTGCTCTTTTG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTAGCTTCCTGTCTTGCTaGTTTGCTGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGSFLSC*FAGAGA
Trigger: AGCCCCAGCTCCAGCAAAGCAGCAAGACAGGAAGCT...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCAGTTGTTTGTGCCACTaGACCTCTGAGCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLSCLCH*TSEQLC
Trigger: GCAAAGCTGCTCAGAGGTGCAGTGGCACAAACAACT...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGCTTGAGCTTCTGCTaGCTTCCCCTTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGCLSFC*LPLHAA
Trigger: AGCAGCATGAAGGGGAAGGCAGCAGAAGCTCAAGCA...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCTGCTTTGCTGGAGCTaGGGCTGTGCCATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLLLCWS*GCAIKS
Trigger: ACTTTTAATGGCACAGCCCCAGCTCCAGCAAAGCAG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAATGCATTATGAGGGTTTaGGAGTGGGGCTGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVRECIMRV*EWGWAG
Trigger: GCCAGCCCAGCCCCACTCCCAAACCCTCATAATGCA...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATAGAGAAATTTCCTGGTaGGGAGTGGGGTGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDREISW*GVGCPS
Trigger: GGAAGGACACCCCACTCCCCACCAGGAAATTTCTCT...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409260.5
CDS-3UTR TCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCTAGGTCCACATAGCTaGACCCACCCTCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFLGPHS*THPPPV
Trigger: AACTGGGGGAGGGTGGGTTCAGCTATGTGGACCTAG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396738.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACAGTCCGCTCATCGATaGCACAGTGACTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGQSAHR*HSDSAQ
Trigger: CTGTGCAGAGTCACTGTGTCATCGATGAGCGGACTG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATCAGTCCGCTCATCGATaGCACAGTGACTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNQSAHR*HSDSAQ
Trigger: CTGTGCAGAGTCACTGTGTCATCGATGAGCGGACTG...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCGAAAAGATGCAGGACTaGGATGATTGTCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSEKMQD*DDCPDP
Trigger: GGGGTCAGGACAATCATCTCAGTCCTGCATCTTTTC...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCAGTCAGAACACTATGTaGGCTCAACAGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLSQNTM*AQQSCS
Trigger: TGAGCAGGACTGTTGAGCTCACATAGTGTTCTGACT...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAACCCAGGCAGTTCGCCTaGAATGGCAACCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREPRQFA*NGNLTL
Trigger: CAAAGTCAGGTTGCCATTTCAGGCGAACTGCCTGGG...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCAACCTCCTGTAGAATaGAGTCACACCATTGCCGAC +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGQPPVE*SHTIAD
Trigger: GTCGGCAATGGTGTGACTTCATTCTACAGGAGGTTG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCAGTATAGGGAGGAAATaGGGACCAAAATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGSIGRK*GPKSRH
Trigger: GTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACT...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGAGTATAGGGAGGAAATaGGGACCAAAATCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWSIGRK*GPKSRH
Trigger: GTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACT...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCTCTGTTTGCTGTTCATaGCCCTTATCCCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGSVCCS*PLSLPS
Trigger: CGATGGAAGGGATAAGGGTCATGAACAGCAAACAGA...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTTTCCCTCTGAGTGCTTaGGCTTCTGCTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPFPLSA*ASAAFP
Trigger: GGGGAAGGCAGCAGAAGCTCAAGCACTCAGAGGGAA...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAACTAGGTCCACATAGCTaGACCCACTGTGGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVRELGPHS*THCGPK
Trigger: CTTTGGCCCACAGTGGGTTCAGCTATGTGGACCTAG...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409260.5
CDS-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGAGCCCTCCACATGGATaGATGCTTGATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWSPPHG*MLDSWN
Trigger: GTTCCATGAATCAAGCATGCATCCATGTGGAGGGCT...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCATCGAGTTCAGGAGCTaGCGCAATGCTGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSIEFRS*RNAEEC
Trigger: GCATTCTTCAGCATTGCGGCAGCTCCTGAACTCGAT...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCTCAGTAAGTCCCCTTaGCCAGGTTTTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSLSKSP*PGFALG
Trigger: TCCAAGAGCAAAACCTGGGCAAGGGGACTTACTGAG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
CDS-3UTR GCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACACCATTGCCGACTCTaGACCATTCCTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGHHCRL*TIPPSQ
Trigger: CTGGGAAGGAGGAATGGTGCAGAGTCGGCAATGGTG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGTGGCAGCTGGATACTaGCACACCACACTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNVAAGY*HTTLPH
Trigger: ATGAGGCAGTGTGGTGTGGCAGTATCCAGCTGCCAC...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGAGGAGATGCCAACCCTaGCCTTGCCTTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWRRCQP*PCLSSL
Trigger: CAGGGAGGAAAGGCAAGGGCAGGGTTGGCATCTCCT...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGAGTTGTTTGTGCCACTaGACCTCTGAGCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGSCLCH*TSEQLC
Trigger: GCAAAGCTGCTCAGAGGTGCAGTGGCACAAACAACT...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCCTGCCTTCCCCTTCATaGTGCTGCTGCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSLPSPS*CCCSVC
Trigger: GCAAACAGAGCAGCAGCAGCATGAAGGGGAAGGCAG...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATCTTGTTCCCTCTGAGTaGTTGAGCTTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDLVPSE*LSFCCL
Trigger: AAGGCAGCAGAAGCTCAAGCACTCAGAGGGAACAAG...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCTTGTTCCCTCTGAGTaGTTGAGCTTCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSLVPSE*LSFCCL
Trigger: AAGGCAGCAGAAGCTCAAGCACTCAGAGGGAACAAG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGAAGTCCTGGATGGAATaGGTGGTGATTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWKSWME*VVIPMR
Trigger: CCTCATTGGAATCACCACCCATTCCATCCAGGACTT...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCAAGTCCTGGATGGAATaGGTGGTGATTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLKSWME*VVIPMR
Trigger: CCTCATTGGAATCACCACCCATTCCATCCAGGACTT...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGCAGTTCGCCTGAAATaGCAACCTGACTTTGGGCCC +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREAVRLK*QPDFGP
Trigger: GGGCCCAAAGTCAGGTTGCCATTTCAGGCGAACTGC...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCCTCCTGCTAGGGCCCTaGGGAAAGCTTCAACTTTGC +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSLLLGP*GKLQLC
Trigger: GCAAAGTTGAAGCTTTCCCCAGGGCCCTAGCAGGAG...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATCTCCTGCTAGGGCCCTaGGGAAAGCTTCAACTTTGC +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNLLLGP*GKLQLC
Trigger: GCAAAGTTGAAGCTTTCCCCAGGGCCCTAGCAGGAG...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCTGCTTTGCTGGAGCTaGGGCTGTGCCATTAAAAGT +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSLLCWS*GCAIKS
Trigger: ACTTTTAATGGCACAGCCCCAGCTCCAGCAAAGCAG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGAGTCTTGCTGCTTTGCTaGAGCTGGGGCTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGVLLLC*SWGCAI
Trigger: AATGGCACAGCCCCAGCTCCAGCAAAGCAGCAAGAC...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCTGGCCCAGAGTTCCTaGGCATGGAGCCACGTCATA +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWLAQSS*AWSHVI
Trigger: TATGACGTGGCTCCATGCCCAGGAACTCTGGGCCAG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTGGCCCAGAGTTCCTaGGCATGGAGCCACGTCATA +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPLAQSS*AWSHVI
Trigger: TATGACGTGGCTCCATGCCCAGGAACTCTGGGCCAG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
3UTR CAA 72 bp TGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTaGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: CCLYIYQLWKQG*AQAPLCIMRVW
Trigger: CCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGACATGGATGCATGCTTaGTTCATGGAACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGTWMHA*FMEPKS
Trigger: GGACTTGGGTTCCATGAATCAAGCATGCATCCATGT...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCAGTCCGCTCATCGATaGCACAGTGACTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWQSAHR*HSDSAQ
Trigger: CTGTGCAGAGTCACTGTGTCATCGATGAGCGGACTG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCAGTCCGCTCATCGATaGCACAGTGACTCTGCACAG +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFQSAHR*HSDSAQ
Trigger: CTGTGCAGAGTCACTGTGTCATCGATGAGCGGACTG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGAAAAGATGCAGGACTaGGATGATTGTCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGEKMQD*DDCPDP
Trigger: GGGGTCAGGACAATCATCTCAGTCCTGCATCTTTTC...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAGTCAGAACACTATGTaGGCTCAACAGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSSQNTM*AQQSCS
Trigger: TGAGCAGGACTGTTGAGCTCACATAGTGTTCTGACT...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
CDS-3UTR TCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTCCCAGGCAGTTCGCCTaGAATGGCAACCTGACTTTG +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLPRQFA*NGNLTL
Trigger: CAAAGTCAGGTTGCCATTTCAGGCGAACTGCCTGGG...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCCTAGGGAACAGGTTTaGAGCCCAGCTAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWPREQV*SPAKTG
Trigger: CCCTGTCTTAGCTGGGCTTCAAACCTGTTCCCTAGG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCTAGGGAACAGGTTTaGAGCCCAGCTAAGACAGGG +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFPREQV*SPAKTG
Trigger: CCCTGTCTTAGCTGGGCTTCAAACCTGTTCCCTAGG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTCTCCTCTGTGCATTATaGGGGTTTGGGAGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLLLCAL*GFGSGA
Trigger: AGCCCCACTCCCAAACCCTCATAATGCACAGAGGAG...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCCAAACTGTTGAAGGATaGGTCTTCAGCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGQTVEG*VFSSFP
Trigger: TGGAAAGGAGCTGAAGACTCATCCTTCAACAGTTTG...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCTGTTTGCTGTTCATaGCCCTTATCCCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDSVCCS*PLSLPS
Trigger: CGATGGAAGGGATAAGGGTCATGAACAGCAAACAGA...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCTCCACATGGATGCATaGTTGATTCATGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWLHMDA*LIHGTQ
Trigger: TTGGGTTCCATGAATCAAGCATGCATCCATGTGGAG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACGCAATGCTGAAGAATaGCTGGGGCTTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGRNAEE*LGLCGM
Trigger: CATCCCACAAAGCCCCAGGCATTCTTCAGCATTGCG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTCTCAGTAAGTCCCCTTaGCCAGGTTTTGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGLSKSP*PGFALG
Trigger: TCCAAGAGCAAAACCTGGGCAAGGGGACTTACTGAG...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
CDS-3UTR GCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTGCCAACCCTGCCCTTaGCTTTCCTCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLCQPCP*LSSLVI
Trigger: AATCACCAGGGAGGAAAGGCAAGGGCAGGGTTGGCA...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTTGCCAACCCTGCCCTTaGCTTTCCTCCCTGGTGATT +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPCQPCP*LSSLVI
Trigger: AATCACCAGGGAGGAAAGGCAAGGGCAGGGTTGGCA...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGAGCTTCCTGTCTTGCTaGTTTGCTGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWSFLSC*FAGAGA
Trigger: AGCCCCAGCTCCAGCAAAGCAGCAAGACAGGAAGCT...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGCCCAGGCTCCTCTGTaGATTATGAGGGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWAQAPL*IMRVWE
Trigger: CTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGC...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAGCTGAAGGTGAGACCTaGAAAGGGGTTCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPAEGET*KGVLAR
Trigger: CCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGC...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCACTGCCTTCCCCTTCATaGTGCTGCTGCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPLPSPS*CCCSVC
Trigger: GCAAACAGAGCAGCAGCAGCATGAAGGGGAAGGCAG...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAGAGTAGGCAGGAAGTaGCAGCTGGATACTGCCACA +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSRVGRK*QLDTAT
Trigger: TGTGGCAGTATCCAGCTGCCACTTCCTGCCTACTCT...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAGTCTTGCTGCTTTGCTaGAGCTGGGGCTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPVLLLC*SWGCAI
Trigger: AATGGCACAGCCCCAGCTCCAGCAAAGCAGCAAGAC...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAACAGAGTTCCTGGGCATaGAGCCACGTCATAAGCTTG +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREQSSWA*SHVISL
Trigger: CAAGCTTATGACGTGGCTCCATGCCCAGGAACTCTG...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCTACATTTACCAACTCTaGAAGCAAGGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSYIYQL*KQGLAQ
Trigger: CTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTA...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACCTAGAGAAATTTCCTaGTGGGGAGTGGGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGPREIS*WGVGCP
Trigger: AGGACACCCCACTCCCCACCAGGAAATTTCTCTAGG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409260.5
CDS-3UTR TCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTCTAGGTCCACATAGCTaGACCCACCCTCCCCCAGTT +
Preference number: 4 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTLGPHS*THPPPV
Trigger: AACTGGGGGAGGGTGGGTTCAGCTATGTGGACCTAG...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATAGCAGCCAAAGGATTTaGTCCTCGGTCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNSSQRI*SSVRKL
Trigger: CAACTTCCTGACCGAGGATCAAATCCTTTGGCTGCT...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAAGCAGCCAAAGGATTTaGTCCTCGGTCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVRESSQRI*SSVRKL
Trigger: CAACTTCCTGACCGAGGATCAAATCCTTTGGCTGCT...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAAAAGATGCAGGACTaGGATGATTGTCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNEKMQD*DDCPDP
Trigger: GGGGTCAGGACAATCATCTCAGTCCTGCATCTTTTC...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCTCCACATGGATGCATaGTTGATTCATGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGLHMDA*LIHGTQ
Trigger: TTGGGTTCCATGAATCAAGCATGCATCCATGTGGAG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATCTCCACATGGATGCATaGTTGATTCATGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDLHMDA*LIHGTQ
Trigger: TTGGGTTCCATGAATCAAGCATGCATCCATGTGGAG...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCAGCCCTCCACATGGATaGATGCTTGATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGSPPHG*MLDSWN
Trigger: GTTCCATGAATCAAGCATGCATCCATGTGGAGGGCT...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCGCAATGCTGAAGAATaGCTGGGGCTTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWRNAEE*LGLCGM
Trigger: CATCCCACAAAGCCCCAGGCATTCTTCAGCATTGCG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAATCGAGTTCAGGAGCTaGCGCAATGCTGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREIEFRS*RNAEEC
Trigger: GCATTCTTCAGCATTGCGGCAGCTCCTGAACTCGAT...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATATCGAGTTCAGGAGCTaGCGCAATGCTGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNIEFRS*RNAEEC
Trigger: GCATTCTTCAGCATTGCGGCAGCTCCTGAACTCGAT...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCGCCATCTTCTCAACATaGTGCTTTTTCAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLAIFST*CFFRFG
Trigger: CCCAAATCTGAAAAAGCAGCATGTTGAGAAGATGGC...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCCCTTGCCCAGGTTTTaGTCTTGGAGGGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPPLPRF*SWREES
Trigger: GCTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCCTTGCCCAGGTTTTaGTCTTGGAGGGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFPLPRF*SWREES
Trigger: GCTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR GCA 90 bp TTCTTCCTGCTGCCTCTACATTTACCAACTCTGGAAGCAAGGCTTGGCCCAGGCCCCTGTTCTTCCTGCTaGCTCTACATTTACCAACTC +
Preference number: 4 (lower is better)
Translates to: FFLLPLHLPTLEARLGPGPCSSC*LYIYQL
Trigger: GAGTTGGTAAATGTAGAGGCAGCAGGAAGAACAGGG...GCCTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTAGAGGCAGCAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTTGCTTGAGCTTCTGCTaGCTTCCCCTTCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPCLSFC*LPLHAA
Trigger: AGCAGCATGAAGGGGAAGGCAGCAGAAGCTCAAGCA...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCTCCAAGCAATATATTaGTGGGCTTCAAGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLLQAIY*WASSLC
Trigger: ACAGAGACTTGAAGCCCACCAATATATTGCTTGGAG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGCTGCTTTTTCAGATTTaGGTAGTATGTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWLLFQI*VVCWPG
Trigger: TCCTGGCCAACATACTACCCAAATCTGAAAAAGCAG...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAAGAGTAGGCAGGAAGTaGCAGCTGGATACTGCCACA +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPRVGRK*QLDTAT
Trigger: TGTGGCAGTATCCAGCTGCCACTTCCTGCCTACTCT...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTGCTGATGTCATACTGTaGGGTAGACATGGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFADVIL*GRHGSG
Trigger: CCCCGAACCATGTCTACCCCACAGTATGACATCAGC...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTGGTCATCTCCCACATaGCTTGGACCTAGAGAAATT +
Preference number: 4 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDWSSPT*LGPREI
Trigger: AATTTCTCTAGGTCCAAGCCATGTGGGAGATGACCA...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409260.5
CDS-3UTR TCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCACCCCCAGTTTCTGGATaGAGAGGTAGCGCTTATTGT +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPPPVSG*RGSAYC
Trigger: ACAATAAGCGCTACCTCTTCATCCAGAAACTGGGGG...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCCCCCAGTTTCTGGATaGAGAGGTAGCGCTTATTGT +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPPPVSG*RGSAYC
Trigger: ACAATAAGCGCTACCTCTTCATCCAGAAACTGGGGG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTAGCAGCCAAAGGATTTaGTCCTCGGTCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPSSQRI*SSVRKL
Trigger: CAACTTCCTGACCGAGGATCAAATCCTTTGGCTGCT...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAACATGGATGCATGCTTaGTTCATGGAACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVRETWMHA*FMEPKS
Trigger: GGACTTGGGTTCCATGAATCAAGCATGCATCCATGT...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATACATGGATGCATGCTTaGTTCATGGAACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNTWMHA*FMEPKS
Trigger: GGACTTGGGTTCCATGAATCAAGCATGCATCCATGT...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGAACATGGATGCATGCTTaGTTCATGGAACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGTWMHA*FMEPKS
Trigger: GGACTTGGGTTCCATGAATCAAGCATGCATCCATGT...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTGAAAAGATGCAGGACTaGGATGATTGTCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFEKMQD*DDCPDP
Trigger: GGGGTCAGGACAATCATCTCAGTCCTGCATCTTTTC...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCAACCTCCTGTAGAATaGAGTCACACCATTGCCGAC +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPQPPVE*SHTIAD
Trigger: GTCGGCAATGGTGTGACTTCATTCTACAGGAGGTTG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAAGCCCTCCACATGGATaGATGCTTGATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVRESPPHG*MLDSWN
Trigger: GTTCCATGAATCAAGCATGCATCCATGTGGAGGGCT...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTATCGAGTTCAGGAGCTaGCGCAATGCTGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLIEFRS*RNAEEC
Trigger: GCATTCTTCAGCATTGCGGCAGCTCCTGAACTCGAT...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTATCGAGTTCAGGAGCTaGCGCAATGCTGAAGAATGC +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPIEFRS*RNAEEC
Trigger: GCATTCTTCAGCATTGCGGCAGCTCCTGAACTCGAT...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGGCCATCTTCTCAACATaGTGCTTTTTCAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGAIFST*CFFRFG
Trigger: CCCAAATCTGAAAAAGCAGCATGTTGAGAAGATGGC...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACCCTGTTCTTCCTGCTaGCTCTACATTTACCAACTC +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGPCSSC*LYIYQL
Trigger: GAGTTGGTAAATGTAGAGGCAGCAGGAAGAACAGGG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp ATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTCTACCCTGTTCTTCCTaGTGCCTCTACATTTACCAA +
Preference number: 4 (lower is better)
Translates to: IVLTPLPPSVREVLDGMGLPCSS*CLYIYQ
Trigger: TTGGTAAATGTAGAGGCAGCAGGAAGAACAGGGTAG...ACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAAAGTCCTGGATGGAATaGGTGGTGATTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREKSWME*VVIPMR
Trigger: CCTCATTGGAATCACCACCCATTCCATCCAGGACTT...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGAAAGTCCTGGATGGAATaGGTGGTGATTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGKSWME*VVIPMR
Trigger: CCTCATTGGAATCACCACCCATTCCATCCAGGACTT...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR TCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGTACTCACCCCAGGAGTaGAGGAAGGAAAGAACTAGT +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWYSPQE*RKERTS
Trigger: ACTAGTTCTTTCCTTCCTTCACTCCTGGGGTGAGTA...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTTACTCACCCCAGGAGTaGAGGAAGGAAAGAACTAGT +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFYSPQE*RKERTS
Trigger: ACTAGTTCTTTCCTTCCTTCACTCCTGGGGTGAGTA...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCCTCCACATGGATGCATaGTTGATTCATGGAACCCAA +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSLHMDA*LIHGTQ
Trigger: TTGGGTTCCATGAATCAAGCATGCATCCATGTGGAG...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGAGCCCTCCACATGGATaGATGCTTGATTCATGGAAC +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWSPPHG*MLDSWN
Trigger: GTTCCATGAATCAAGCATGCATCCATGTGGAGGGCT...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTCGCAATGCTGAAGAATaGCTGGGGCTTTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTRNAEE*LGLCGM
Trigger: CATCCCACAAAGCCCCAGGCATTCTTCAGCATTGCG...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTAAGTCCTGGATGGAATaGGTGGTGATTCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLKSWME*VVIPMR
Trigger: CCTCATTGGAATCACCACCCATTCCATCCAGGACTT...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTGCTGATGTCATACTGTaGGGTAGACATGGTTCGGGG +
Preference number: 4 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTADVIL*GRHGSG
Trigger: CCCCGAACCATGTCTACCCCACAGTATGACATCAGC...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCATACATTTACCAACTCTaGAAGCAAGGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPYIYQL*KQGLAQ
Trigger: CTGGGCCAAGCCTTGCTTCCAGAGTTGGTAAATGTA...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTCAAGCAATATATTGGTaGGCTTCAAGTCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLQAIYW*ASSLPP
Trigger: GGGAGGGAGACTTGAAGCCCACCAATATATTGCTTG...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409516.7
CDS-3UTR CCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTGTCAATAAAGGGCCATaGTCATCTCCCACATGGCTT +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPVNKGP*SSPTWL
Trigger: AAGCCATGTGGGAGATGACCATGGCCCTTTATTGAC...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409260.5
CDS-3UTR TCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCAAACTGTTGAAGGATaGGTCTTCAGCTCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWQTVEG*VFSSFP
Trigger: TGGAAAGGAGCTGAAGACTCATCCTTCAACAGTTTG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGAGCCATCTTCTCAACATaGTGCTTTTTCAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGAIFST*CFFRFG
Trigger: CCCAAATCTGAAAAAGCAGCATGTTGAGAAGATGGC...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCGCCATCTTCTCAACATaGTGCTTTTTCAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: EVLDGMGGDSNEGWEPLSAIFST*CFFRFG
Trigger: CCCAAATCTGAAAAAGCAGCATGTTGAGAAGATGGC...GGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATCTGCTTTTTCAGATTTaGGTAGTATGTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNLLFQI*VVCWPG
Trigger: TCCTGGCCAACATACTACCCAAATCTGAAAAAGCAG...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACTGCTTTTTCAGATTTaGGTAGTATGTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGLLFQI*VVCWPG
Trigger: TCCTGGCCAACATACTACCCAAATCTGAAAAAGCAG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCTCCAAGCAATATATTaGTGGGCTTCAAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFLQAIY*WASSLP
Trigger: AGGGAGACTTGAAGCCCACCAATATATTGCTTGGAG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409516.7
CDS-3UTR TCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTACATGGATGCATGCTTaGTTCATGGAACCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTTWMHA*FMEPKS
Trigger: GGACTTGGGTTCCATGAATCAAGCATGCATCCATGT...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR TCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTAGTCAGAACACTATGTaGGCTCAACAGTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTSQNTM*AQQSCS
Trigger: TGAGCAGGACTGTTGAGCTCACATAGTGTTCTGACT...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTGCCATCTTCTCAACATaGTGCTTTTTCAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFAIFST*CFFRFG
Trigger: CCCAAATCTGAAAAAGCAGCATGTTGAGAAGATGGC...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATAATAAACAGTTTCCTTaGACGGTTTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNNKQFP*TVSCSL
Trigger: GAGGGAACAAGAAACCGTGCAAGGAAACTGTTTATT...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CCA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTCTGCTTTTTCAGATTTaGGTAGTATGTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLLLFQI*VVCWPG
Trigger: TCCTGGCCAACATACTACCCAAATCTGAAAAAGCAG...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CCA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTGCTTTTTCAGATTTaGGTAGTATGTTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPLLFQI*VVCWPG
Trigger: TCCTGGCCAACATACTACCCAAATCTGAAAAAGCAG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR GCA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTCTACCCTGTTCTTCCTaGTGCCTCTACATTTACCAA +
Preference number: 4 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTLPCSS*CLYIYQ
Trigger: TTGGTAAATGTAGAGGCAGCAGGAAGAACAGGGTAG...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR GCA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGAATAAACAGTTTCCTTaGACGGTTTCTTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWNKQFP*TVSCSL
Trigger: GAGGGAACAAGAAACCGTGCAAGGAAACTGTTTATT...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS GCA 90 bp CCACCCCGGTCTAGGAGCCCAGAGCCCGGGATGGGCCATCTGCACTaGCGGACTGACCTGGCTCGGGCCAGAGAGAAGCGCCACCGACCG +
Preference number: 5 (lower is better)
Translates to: PPRSRSPEPGMGHLH*RTDLARAREKRHRP
Trigger: CGGTCGGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGGCTCCTAGACCGGGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS GCA 90 bp AGGGCCCACCCCGGTCTAGGAGCCCAGAGCCCGGGATGGGCCATCTaGACTGCCGGACTGACCTGGCTCGGGCCAGAGAGAAGCGCCACC +
Preference number: 5 (lower is better)
Translates to: RAHPGLGAQSPGWAI*TAGLTWLGPERSAT
Trigger: GGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGGCTCCTAGACCGGGGTGGGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS CCA 90 bp ACTCCTGGCAGGGCCCACCCCGGTCTAGGAGCCCAGAGCCCGGGATaGGCCATCTGCACTGCCGGACTGACCTGGCTCGGGCCAGAGAGA +
Preference number: 5 (lower is better)
Translates to: TPGRAHPGLGAQSPG*AICTAGLTWLGPER
Trigger: TCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGGCTCCTAGACCGGGGTGGGCCCTGCCAGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS CCA 90 bp CACAGTGACTCTGCACAGAGAAGAGCTCTGGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCCAGTCCTGCAGGGTCAGAGCCTGGC +
Preference number: 5 (lower is better)
Translates to: HSDSAQRRALGLGRR*CTAGLPSPAGSEPG
Trigger: GCCAGGCTCTGACCCTGCAGGACTGGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCCCAGAGCTCTTCTCTGTGCAGAGTCACTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000475696.5
ENST00000478018.5
ENST00000496443.5
CDS CCA 90 bp CACAGTGACTCTGCACAGAGAAGAGCTCTGGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCCAGTCCTGGAACAGTGATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: HSDSAQRRALGLGRR*CTAGLPSPGTVIPE
Trigger: CTCTGGGATCACTGTTCCAGGACTGGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCCCAGAGCTCTTCTCTGTGCAGAGTCACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496800.5
CDS-3UTR CAA 90 bp TGGAAGCAAGGCTTGGCCCAGGCTCCTCTGTGCATTATGAGGGTTTGGGAGTGGAGCCACGTCATAAGCTaGGGGGATGGGAGGGAACAC +
Preference number: 5 (lower is better)
Translates to: WKQGLAQAPLCIMRVWEWSHVIS*GDGREH
Trigger: GTGTTCCCTCCCATCCCCCAAGCTTATGACGTGGCT...CCACTCCCAAACCCTCATAATGCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCAGCCACGTCATAAGCTaGGGGGATGGGAGGGAACAC +
Preference number: 5 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGSHVIS*GDGREH
Trigger: GTGTTCCCTCCCATCCCCCAAGCTTATGACGTGGCT...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGGTGCATTATGAGGGTTaGGGAGTGGGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGVHYEG*GVGLGW
Trigger: CCAGCCCAGCCCCACTCCCAAACCCTCATAATGCAC...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCGTGCATTATGAGGGTTaGGGAGTGGGGCTGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSVHYEG*GVGLGW
Trigger: CCAGCCCAGCCCCACTCCCAAACCCTCATAATGCAC...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCCCTGCAAAGGGGTTCTaGCCAGGCCCAGGAAGCATA +
Preference number: 5 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGPAKGF*PGPGSI
Trigger: TATGCTTCCTGGGCCTGGCAAGAACCCCTTTGCAGG...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCCCCCTTGCCCAGGTTTaGCTCTTGGAGGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLPLAQV*LLEGRK
Trigger: CTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGGG...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp ATGAGCTTGAACGATCAGGGAGACACAGGCCAAAACAGCTGCCGCTGCCACCTCGGCGATCTCCTAGAGTaGTTTGTGCCACTGCACCTC +
Preference number: 5 (lower is better)
Translates to: MSLNDQGDTGQNSCRCHLGDLLE*FVPLHL
Trigger: GAGGTGCAGTGGCACAAACAACTCTAGGAGATCGCC...GAGGTGGCAGCGGCAGCTGTTTTGGCCTGTGTCTCCCTGATCGTTCAAGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCCCCTTGCCCAGGTTTaGCTCTTGGAGGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSPLAQV*LLEGRK
Trigger: CTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGGG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATGGGAAAGCTTCAACTTaGCTAACAGGAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDGKAST*LTGAPG
Trigger: GCCTGGGGCTCCTGTTAGCAAAGTTGAAGCTTTCCC...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTCTGGAAGCAAGGCTaGGCCCAGGCTCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPLWKQG*AQAPLC
Trigger: GCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGAG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATCACAGCGTACCTCTCTaGAAGAATGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDHSVPL*KNGSSS
Trigger: GCTGCTGCTACCATTCTTCAAGAGAGGTACGCTGTG...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp ACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCCACAGCGTACCTCTCTaGAAGAATGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TPLPPSVREVLDGMGGDSHSVPL*KNGSSS
Trigger: GCTGCTGCTACCATTCTTCAAGAGAGGTACGCTGTG...GGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCTCGGTCAGGAAGTaGCCTTTGTCCTTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDSSVRK*PLSFSL
Trigger: AAGGCTGAAGGACAAAGGCAACTTCCTGACCGAGGA...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATCCTGCAAAGGGGTTCTaGCCAGGCCCAGGAAGCATA +
Preference number: 5 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNPAKGF*PGPGSI
Trigger: TATGCTTCCTGGGCCTGGCAAGAACCCCTTTGCAGG...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCCTTATCCCTTCCATCGCTGAAGGTGAGACCTGCAAAGGGGTTCTTGCCAGGCGCTGCTTTTTCAGATTaGGGTAGTATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PLSLPSLKVRPAKGFLPGAAFSD*GSMLAR
Trigger: CCTGGCCAACATACTACCCAAATCTGAAAAAGCAGC...GCCTGGCAAGAACCCCTTTGCAGGTCTCACCTTCAGCGATGGAAGGGATAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACCCCTTGCCCAGGTTTaGCTCTTGGAGGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGPLAQV*LLEGRK
Trigger: CTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGGG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CAA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAATTCGGGGGAGGAGGCTaGGATCACAAAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREFGGGG*DHKRAG
Trigger: TCCTGCTCTTTTGTGATCCAAGCCTCCTCCCCCGAA...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTCTCTGGAAGCAAGGCTaGGCCCAGGCTCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTLWKQG*AQAPLC
Trigger: GCACAGAGGAGCCTGGGCCAAGCCTTGCTTCCAGAG...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCTGCTGCTGCTCTGTTaGCTGTTCATGACCCTTATC +
Preference number: 5 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGLLLLC*LFMTLI
Trigger: GATAAGGGTCATGAACAGCAAACAGAGCAGCAGCAG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGTTCCCTCTGAGTGCTaGAGCTTCTGCTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWVPSEC*SFCCLP
Trigger: GGGAAGGCAGCAGAAGCTCAAGCACTCAGAGGGAAC...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS CCA 90 bp TTCCCAGGAAGGAAGTTGAAGTGGATGGGGACATATTGTGGTTCCTaGCGCCCCATGCAACAGAAACCAACAACCTACTCTACTCCACGG +
Preference number: 5 (lower is better)
Translates to: FPGRKLKWMGTYCGS*RPMQQKPTTYSTPR
Trigger: CCGTGGAGTAGAGTAGGTTGTTGGTTTCTGTTGCATGGGGCGCCAGGAACCACAATATGTCCCCATCCACTTCAACTTCCTTCCTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS-3UTR CAA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACACAGCGTACCTCTCTaGAAGAATGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGHSVPL*KNGSSS
Trigger: GCTGCTGCTACCATTCTTCAAGAGAGGTACGCTGTG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp GATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGCACATGGATGCATGCTaGATTCATGGAACCCAAGTC +
Preference number: 5 (lower is better)
Translates to: DCPDPATPKCKRSPGWNGHMDAC*IHGTQV
Trigger: GACTTGGGTTCCATGAATCAAGCATGCATCCATGTG...CCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATGCTGCTTTTTCAGATTaGGGTAGTATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LTPLPPSVREVLDGMGGDAAFSD*GSMLAR
Trigger: CCTGGCCAACATACTACCCAAATCTGAAAAAGCAGC...ATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCCCCTTGCCCAGGTTTaGCTCTTGGAGGGAAGAAAG +
Preference number: 5 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWPLAQV*LLEGRK
Trigger: CTTTCTTCCCTCCAAGAGCAAAACCTGGGCAAGGGG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGTTCGGGGGAGGAGGCTaGGATCACAAAAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWFGGGG*DHKRAG
Trigger: TCCTGCTCTTTTGTGATCCAAGCCTCCTCCCCCGAA...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS TCA 90 bp GGTACAACTGGGTACAGTATCAGTGACATTTCCCAGGAAGGAAGTTaGAGTGGATGGGGACATATTGTGGTTCCTGGCGCCCCATGCAAC +
Preference number: 5 (lower is better)
Translates to: GTTGYSISDISQEGS*SGWGHIVVPGAPCN
Trigger: GTTGCATGGGGCGCCAGGAACCACAATATGTCCCCATCCACTTCAACTTCCTTCCTGGGAAATGTCACTGATACTGTACCCAGTTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS-3UTR CAA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGCACAGCGTACCTCTCTaGAAGAATGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWHSVPL*KNGSSS
Trigger: GCTGCTGCTACCATTCTTCAAGAGAGGTACGCTGTG...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp GATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATCTGCTGCTGCTCTGTTaGCTGTTCATGACCCTTATC +
Preference number: 5 (lower is better)
Translates to: DDCPDPATPKCKRSPGWNLLLLC*LFMTLI
Trigger: GATAAGGGTCATGAACAGCAAACAGAGCAGCAGCAG...ATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTGTTCCCTCTGAGTGCTaGAGCTTCTGCTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTVPSEC*SFCCLP
Trigger: GGGAAGGCAGCAGAAGCTCAAGCACTCAGAGGGAAC...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS CCA 90 bp GTGACATTTCCCAGGAAGGAAGTTGAAGTGGATGGGGACATATTGTaGTTCCTGGCGCCCCATGCAACAGAAACCAACAACCTACTCTAC +
Preference number: 5 (lower is better)
Translates to: VTFPRKEVEVDGDIL*FLAPHATETNNLLY
Trigger: GTAGAGTAGGTTGTTGGTTTCTGTTGCATGGGGCGCCAGGAACCACAATATGTCCCCATCCACTTCAACTTCCTTCCTGGGAAATGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS-3UTR CAA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACACATGGATGCATGCTaGATTCATGGAACCCAAGTC +
Preference number: 5 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGHMDAC*IHGTQV
Trigger: GACTTGGGTTCCATGAATCAAGCATGCATCCATGTG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAACACACTGTCACCCTTTaGGAACACCATGTCATAAGG +
Preference number: 5 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREHTVTL*EHHVIR
Trigger: CCTTATGACATGGTGTTCCAAAAGGGTGACAGTGTG...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACACACTGTCACCCTTTaGGAACACCATGTCATAAGG +
Preference number: 5 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGHTVTL*EHHVIR
Trigger: CCTTATGACATGGTGTTCCAAAAGGGTGACAGTGTG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGCTGCTTTTTCAGATTaGGGTAGTATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREAAFSD*GSMLAR
Trigger: CCTGGCCAACATACTACCCAAATCTGAAAAAGCAGC...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTGGGAAAGCTTCAACTTaGCTAACAGGAGCCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTGKAST*LTGAPG
Trigger: GCCTGGGGCTCCTGTTAGCAAAGTTGAAGCTTTCCC...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp GTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCACACTGTCACCCTTTaGGAACACCATGTCATAAGG +
Preference number: 5 (lower is better)
Translates to: VREVLDGMGGDSNEGWEPHTVTL*EHHVIR
Trigger: CCTTATGACATGGTGTTCCAAAAGGGTGACAGTGTG...AGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp AGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTCACACTGTCACCCTTTaGGAACACCATGTCATAAGG +
Preference number: 5 (lower is better)
Translates to: REVLDGMGGDSNEGWEPLHTVTL*EHHVIR
Trigger: CCTTATGACATGGTGTTCCAAAAGGGTGACAGTGTG...AAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGCTGCTTTTTCAGATTaGGGTAGTATGTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PSVREVLDGMGGDSNEGWAAFSD*GSMLAR
Trigger: CCTGGCCAACATACTACCCAAATCTGAAAAAGCAGC...CCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000409743.1
CDS-3UTR CAA 90 bp CCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGACAGTGGTTTCTGTCTTaGAAAGTTAGACTGCTACCC +
Preference number: 5 (lower is better)
Translates to: PPSVREVLDGMGGDSNEGQWFLS*KVRLLP
Trigger: GGGTAGCAGTCTAACTTTCAAAGACAGAAACCACTG...TCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp CCGCTACCCCCAAGTGTAAGAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATCAGTGGTTTCTGTCTTaGAAAGTTAGACTGCTACCC +
Preference number: 5 (lower is better)
Translates to: PLPPSVREVLDGMGGDSNQWFLS*KVRLLP
Trigger: GGGTAGCAGTCTAACTTTCAAAGACAGAAACCACTG...ATTGGAATCACCACCCATTCCATCCAGGACTTCTCTTACACTTGGGGGTAGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp GAGAAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCATCTCCCACATGGCTaGGACCTAGAGAAATTTCCT +
Preference number: 5 (lower is better)
Translates to: EKSWMEWVVIPMRDGNLFHLPHG*DLEKFP
Trigger: AGGAAATTTCTCTAGGTCCAAGCCATGTGGGAGATG...AAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409260.5
CDS TCA 90 bp GGGCACAGATTATACCACATCCGGTACAACTGGGTACAGTATCAGTaGCATTTCCCAGGAAGGAAGTTGAAGTGGATGGGGACATATTGT +
Preference number: 5 (lower is better)
Translates to: GHRLYHIRYNWVQYQ*HFPGRKLKWMGTYC
Trigger: ACAATATGTCCCCATCCACTTCAACTTCCTTCCTGGGAAATGTCACTGATACTGTACCCAGTTGTACCGGATGTGGTATAATCTGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS-3UTR CAA 90 bp CCTAGGGTTACTCAGTATAGGGAGGAAATGAGGACCAAAATCCAGGCACAAACTCACATGGATGCATGCTaGATTCATGGAACCCAAGTC +
Preference number: 5 (lower is better)
Translates to: PRVTQYREEMRTKIQAQTHMDAC*IHGTQV
Trigger: GACTTGGGTTCCATGAATCAAGCATGCATCCATGTG...AGTTTGTGCCTGGATTTTGGTCCTCATTTCCTCCCTATACTGAGTAACCCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp AGATGCAGGACTGAGATGATTGTCCTGACCCCGCTACCCCCAAGTGTAAGAGAAGCTTCCACTTTATTCTaGTTTACACATTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: RCRTEMIVLTPLPPSVREASTLF*FTHSPA
Trigger: AGCAGGAGAATGTGTAAACAAGAATAAAGTGGAAGC...TTCTCTTACACTTGGGGGTAGCGGGGTCAGGACAATCATCTCAGTCCTGCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS-3UTR CAA 90 bp AAGTCCTGGATGGAATGGGTGGTGATTCCAATGAGGGATGGGAACCTCTTTCCAGCTTCCACTTTATTCTaGTTTACACATTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: KSWMEWVVIPMRDGNLFPASTLF*FTHSPA
Trigger: AGCAGGAGAATGTGTAAACAAGAATAAAGTGGAAGC...TGGAAAGAGGTTCCCATCCCTCATTGGAATCACCACCCATTCCATCCAGGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000409638.7
CDS TCA 72 bp CCCAGAGCCCGGGATGGGCCATCTGCACTGCCGGACTaGCCTGGCTCGGGCCAGAGAGAAGCGCCACCGACC +
Preference number: 6 (lower is better)
Translates to: PRARDGPSALPD*PGSGQREAPPT
Trigger: GGTCGGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS GCA 72 bp CCCGGTCTAGGAGCCCAGAGCCCGGGATGGGCCATCTaGACTGCCGGACTGACCTGGCTCGGGCCAGAGAGA +
Preference number: 6 (lower is better)
Translates to: PGLGAQSPGWAI*TAGLTWLGPER
Trigger: TCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGGCTCCTAGACCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS CCA 72 bp AGCCCGGGATGGGCCATCTGCACTGCCGGACTGACCTaGCTCGGGCCAGAGAGAAGCGCCACCGACCGGAAG +
Preference number: 6 (lower is better)
Translates to: SPGWAICTAGLT*LGPERSATDRK
Trigger: CTTCCGGTCGGTGGCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS GCA 72 bp TCTAGGAGCCCAGAGCCCGGGATGGGCCATCTGCACTaGCGGACTGACCTGGCTCGGGCCAGAGAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: SRSPEPGMGHLH*RTDLARAREKR
Trigger: GCGCTTCTCTCTGGCCCGAGCCAGGTCAGTCCGGCAGTGCAGATGGCCCATCCCGGGCTCTGGGCTCCTAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396738.7
ENST00000475696.5
CDS CCA 72 bp AGAAAACAGGCCCTGCTCCGTCGCCAGCTTCAGGGGTaGGGTCAGGCGCCTTACGGCCTCAGGACACACAGC +
Preference number: 6 (lower is better)
Translates to: RKQALLRRQLQG*GQAPYGLRTHS
Trigger: GCTGTGTGTCCTGAGGCCGTAAGGCGCCTGACCCCACCCCTGAAGCTGGCGACGGAGCAGGGCCTGTTTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000396738.7
ENST00000475342.5
ENST00000475696.5
ENST00000496443.5
ENST00000496800.5
CDS CCA 72 bp TCTGCACAGAGAAGAGCTCTGGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCCAGTCCTGCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: SAQRRALGLGRR*CTAGLPSPAGS
Trigger: TGACCCTGCAGGACTGGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCCCAGAGCTCTTCTCTGTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000396738.7
ENST00000409260.5
ENST00000409516.7
ENST00000409638.7
ENST00000475696.5
ENST00000478018.5
ENST00000496443.5
CDS CCA 72 bp TGGCACCACCAGGGTCCAGAGAAACTGCCAGTCAGCTaGAGGCCTCCGCAGCCCCTGTTTAGCTTAGCCCCT +
Preference number: 6 (lower is better)
Translates to: WHHQGPEKLPVS*RPPQPLFSLAP
Trigger: AGGGGCTAAGCTAAACAGGGGCTGCGGAGGCCTCCAGCTGACTGGCAGTTTCTCTGGACCCTGGTGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS CCA 72 bp TCTGCACAGAGAAGAGCTCTGGGGCTCGGTAGGAGATaGTGCACCGCTGGGCTGCCCAGTCCTGGAACAGTG +
Preference number: 6 (lower is better)
Translates to: SAQRRALGLGRR*CTAGLPSPGTV
Trigger: CACTGTTCCAGGACTGGGCAGCCCAGCGGTGCACCATCTCCTACCGAGCCCCAGAGCTCTTCTCTGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496800.5
CDS TCA 72 bp CTGCTTCCTAACATGCTGGACTGCTCACACAGCCCTTaGGTAGGTGGCTCTGCTGCAACCCCCTCCATAACC +
Preference number: 6 (lower is better)
Translates to: LLPNMLDCSHSP*VGGSAATPSIT
Trigger: GGTTATGGAGGGGGTTGCAGCAGAGCCACCTACTCAAGGGCTGTGTGAGCAGTCCAGCATGTTAGGAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461417.5
CDS CCA 72 bp GCCCAGTCCTGGAACAGTGATCCCAGAGCTCAAAAGTaGGGCACAGGTCATGGTCATGTGACCAAACTGGGA +
Preference number: 6 (lower is better)
Translates to: AQSWNSDPRAQK*GTGHGHVTKLG
Trigger: TCCCAGTTTGGTCACATGACCATGACCTGTGCCCCACTTTTGAGCTCTGGGATCACTGTTCCAGGACTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496800.5
CDS CAA 72 bp GGGTCAATAAAGGGCCATGGTCATCTCCCACATGGCTaGGACCTAGAGAAATTTCCTGGTGGGGAGTGGGGT +
Preference number: 6 (lower is better)
Translates to: GSIKGHGHLPHG*DLEKFPGGEWG
Trigger: ACCCCACTCCCCACCAGGAAATTTCTCTAGGTCCAAGCCATGTGGGAGATGACCATGGCCCTTTATTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000478018.5
ENST00000496443.5
CDS GCA 72 bp AGTGGATGGGGACATATTGTGGTTCCTGGCGCCCCATaGAACAGAAACCAACAACCTACTCTACTCCACGGT +
Preference number: 6 (lower is better)
Translates to: SGWGHIVVPGAP*NRNQQPTLLHG
Trigger: ACCGTGGAGTAGAGTAGGTTGTTGGTTTCTGTTGCATGGGGCGCCAGGAACCACAATATGTCCCCATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS CCA 72 bp TCTCCCACATGGCTTGGACCTAGAGAAATTTCCTGGTaGGGAGTGGGGTGTCCTTCCCATTTAGCAGAAACC +
Preference number: 6 (lower is better)
Translates to: SPTWLGPREISW*GVGCPSHLAET
Trigger: GGTTTCTGCTAAATGGGAAGGACACCCCACTCCCCACCAGGAAATTTCTCTAGGTCCAAGCCATGTGGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000478018.5
ENST00000496443.5
CDS TCA 72 bp GGGTACAGTATCAGTGACATTTCCCAGGAAGGAAGTTaGAGTGGATGGGGACATATTGTGGTTCCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: GYSISDISQEGS*SGWGHIVVPGA
Trigger: GGCGCCAGGAACCACAATATGTCCCCATCCACTTCAACTTCCTTCCTGGGAAATGTCACTGATACTGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS CCA 72 bp AAAGGGGTCAATAAAGGGCCATGGTCATCTCCCACATaGCTTGGACCTAGAGAAATTTCCTGGTGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: KGVNKGPWSSPT*LGPREISWWGV
Trigger: CACTCCCCACCAGGAAATTTCTCTAGGTCCAAGCCATGTGGGAGATGACCATGGCCCTTTATTGACCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000478018.5
ENST00000496443.5
CDS CCA 72 bp AACCCACTGTGGGCCAAAGGGGTCAATAAAGGGCCATaGTCATCTCCCACATGGCTTGGACCTAGAGAAATT +
Preference number: 6 (lower is better)
Translates to: NPLWAKGVNKGP*SSPTWLGPREI
Trigger: AATTTCTCTAGGTCCAAGCCATGTGGGAGATGACCATGGCCCTTTATTGACCCCTTTGGCCCACAGTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409260.5
ENST00000478018.5
ENST00000496443.5
CDS CAA 90 bp TCAGTGACATTTCCCAGGAAGGAAGTTGAAGTGGATGGGGACATATaGTGGTTCCTGGCGCCCCATGCAACAGAAACCAACAACCTACTC +
Preference number: 6 (lower is better)
Translates to: SVTFPRKEVEVDGDI*WFLAPHATETNNLL
Trigger: GAGTAGGTTGTTGGTTTCTGTTGCATGGGGCGCCAGGAACCACAATATGTCCCCATCCACTTCAACTTCCTTCCTGGGAAATGTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5
CDS CCA 72 bp AGGAAGTTGAAGTGGATGGGGACATATTGTGGTTCCTaGCGCCCCATGCAACAGAAACCAACAACCTACTCT +
Preference number: 6 (lower is better)
Translates to: RKLKWMGTYCGS*RPMQQKPTTYS
Trigger: AGAGTAGGTTGTTGGTTTCTGTTGCATGGGGCGCCAGGAACCACAATATGTCCCCATCCACTTCAACTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475696.5