RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK11 (Homo sapiens)

Ensembl gene IDs: ENSG00000118046

Ensembl transcript IDs: ENST00000326873.12, ENST00000585465.2, ENST00000585748.2, ENST00000585851.1, ENST00000586243.5, ENST00000586358.5, ENST00000589152.5, ENST00000591133.2, ENST00000593219.5, ENST00000652231.1

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTaGGGCGGGGCCGCCGGACGGCGCTGGGCGCCCTGCGGAGCACGA +
Preference number: 1 (lower is better)
Translates to: AWRGQEPGLHTRQLV*GGAAGRRWAPCGAR
Trigger: TCGTGCTCCGCAGGGCGCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 90 bp GTCCCCCTGCCCGGCCCTGCAGGGCGCTCCGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGC +
Preference number: 1 (lower is better)
Translates to: VPLPGPAGRSGGPGA*SAQKHGGHLSGRAG
Trigger: GCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGCCCTGCAGGGCCGGGCAGGGGGAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR TCA 90 bp TGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACCTGGCGGGGCTCCTGGACACGGGCT +
Preference number: 1 (lower is better)
Translates to: WRPPLREGGRNRQED*GPGAGTWRGSWTRA
Trigger: AGCCCGTGTCCAGGAGCCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 90 bp ACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGGCTCCTGGACACGGGCTGCAGGCGG +
Preference number: 1 (lower is better)
Translates to: TSPGGRAEPAGRLRA*RGHLAGLLDTGCRR
Trigger: CCGCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 90 bp TGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTaGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGCCCTGCGGAG +
Preference number: 1 (lower is better)
Translates to: CMHGGVRSLVSTPAS*SAAGPPDGAGRPAE
Trigger: CTCCGCAGGGCGCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 90 bp GCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTaGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACG +
Preference number: 1 (lower is better)
Translates to: ARLPGGAACMAGSGA*SPHPPAGLRRGRRT
Trigger: CGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 90 bp GCCGGCGGATCTTGCTGCTGGCGGAGCAGGCCTTGCGGGCAGGGTTaGGGGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCG +
Preference number: 1 (lower is better)
Translates to: AGGSCCWRSRPCGQG*GPGPPPWIWCSAAP
Trigger: CGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCCCCCAACCCTGCCCGCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp TGCAGGGCGCTCCGGAGGTCCTGGGGCGTGGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGAC +
Preference number: 1 (lower is better)
Translates to: CRALRRSWGVVGTEA*RPPLREGGRNRQED
Trigger: GTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGCCCTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 90 bp AGGCACGCAGAGGCCGATGCAGCAGCCCCGGCAGAGCGCAGAGGATaGCCTGACCCGAGGGCGCCGGGCTGTCCTGCCCCAACGCAAGGG +
Preference number: 1 (lower is better)
Translates to: RHAEADAAAPAERRG*PDPRAPGCPAPTQG
Trigger: CCCTTGCGTTGGGGCAGGACAGCCCGGCGCCCTCGGGTCAGGCCATCCTCTGCGCTCTGCCGGGGCTGCTGCATCGGCCTCTGCGTGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GCCCAGGTCTCACACAGGCCTGAGGGTCCCCAGGAGGGAAGCCAGTaGCGGGTCCTGGCTCAGGGATCCTGGCCTGCAGGGGCGGCCGTG +
Preference number: 1 (lower is better)
Translates to: AQVSHRPEGPQEGSQ*RVLAQGSWPAGAAV
Trigger: CACGGCCGCCCCTGCAGGCCAGGATCCCTGAGCCAGGACCCGGCACTGGCTTCCCTCCTGGGGACCCTCAGGCCTGTGTGAGACCTGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GCGAGGAGCCGTGGTGGTTGGCGAGGACTCCGCGAACACACTGGCTaGCGAGCCATCCCCGAGGCCCCTCCCGGGCGAAGTCAGTGGGAG +
Preference number: 1 (lower is better)
Translates to: ARSRGGWRGLREHTG*RAIPEAPPGRSQWE
Trigger: CTCCCACTGACTTCGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GCAGGGTTGGGGGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: AGLGARPSALDLVLS*AASVPFIHTALGRP
Trigger: GGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCCCCCAACCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp CCCTGCGAGGAGCCGTGGTGGTTGGCGAGGACTCCGCGAACACACTaGCTGCCGAGCCATCCCCGAGGCCCCTCCCGGGCGAAGTCAGTG +
Preference number: 1 (lower is better)
Translates to: PCEEPWWLARTPRTH*LPSHPRGPSRAKSV
Trigger: CACTGACTTCGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CTTGGGCCCAGCCCGTCTCTGGTGGGGCAGACCCTGTGGACAAGGTaGCCCAGCTCTGCATCAGCGGGCACAGCCGCCACTGGGCCCTTG +
Preference number: 1 (lower is better)
Translates to: LGPSPSLVGQTLWTR*PSSASAGTAATGPL
Trigger: CAAGGGCCCAGTGGCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTTGTCCACAGGGTCTGCCCCACCAGAGACGGGCTGGGCCCAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTaGCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGCTGTCCAT +
Preference number: 1 (lower is better)
Translates to: PGPPPWIWCSAAPPL*RSYTRPWGGPGAVH
Trigger: ATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CCTTGCGGGCAGGGTTGGGGGCCCGGCCCTCCGCCCTGGATTTGGTaGTCAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGG +
Preference number: 1 (lower is better)
Translates to: PCGQGWGPGPPPWIW*SAAPPLCRSYTRPW
Trigger: CCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCCCCCAACCCTGCCCGCAAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GTCCACGTCCCAGTAGGGACTCTCGCAACCTGCCTGGGCTGGCCCTaGCCTAACTGGCCCTCCTGCCTGGGATTTGCCTGGCTGCCCGTC +
Preference number: 1 (lower is better)
Translates to: VHVPVGTLATCLGWP*PNWPSCLGFAWLPV
Trigger: GACGGGCAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAGTCCCTACTGGGACGTGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp CTCTCTGCAGGGCCCCCACTATTCTGGGACCCTCGGGCCCGGGGGTaGACCCTGTGCACTGGGTCCTCACATCCCAACCTGCCTGGCGTA +
Preference number: 1 (lower is better)
Translates to: LSAGPPLFWDPRARG*TLCTGSSHPNLPGV
Trigger: TACGCCAGGCAGGTTGGGATGTGAGGACCCAGTGCACAGGGTCCACCCCCGGGCCCGAGGGTCCCAGAATAGTGGGGGCCCTGCAGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp AGGTCTGAGCTTGGGCCCAGCCCGTCTCTGGTGGGGCAGACCCTGTaGACAAGGTGCCCCAGCTCTGCATCAGCGGGCACAGCCGCCACT +
Preference number: 1 (lower is better)
Translates to: RSELGPSPSLVGQTL*TRCPSSASAGTAAT
Trigger: AGTGGCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTTGTCCACAGGGTCTGCCCCACCAGAGACGGGCTGGGCCCAAGCTCAGACCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp GCAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTTaGCGAGGACTCCGCGAACACACTGGCTGCCGAGCCATCCCCGAG +
Preference number: 1 (lower is better)
Translates to: AGSCPRTVPARSRGG*RGLREHTGCRAIPE
Trigger: CTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GCTGGCCCTGCCCTAACTGGCCCTCCTGCCTGGGATTTGCCTGGCTaGCCGTCTCAGGGCACCAGGGCTCTGAAAGGCAGAAGACCCTGG +
Preference number: 1 (lower is better)
Translates to: AGPALTGPPAWDLPG*PSQGTRALKGRRPW
Trigger: CCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GGGGGTCAGCGTGTGGTCCACGTCCCAGTAGGGACTCTCGCAACCTaGCTGGGCTGGCCCTGCCCTAACTGGCCCTCCTGCCTGGGATTT +
Preference number: 1 (lower is better)
Translates to: GGQRVVHVPVGTLAT*LGWPCPNWPSCLGF
Trigger: AAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAGTCCCTACTGGGACGTGGACCACACGCTGACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp TCCCGCAGATGGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTaGACCTGCCATGGCCGCAGGTGGGACCCCACCCAGGTACTGACT +
Preference number: 1 (lower is better)
Translates to: SRRWPGQECPLHHVC*TCHGRRWDPTQVLT
Trigger: AGTCAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCCATCTGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp GCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTGCCATaGCCGCAGGTGGGACCCCACCCAGGTACTGACTGCAGGAACCTC +
Preference number: 1 (lower is better)
Translates to: AWAGVSPPPRLLHLP*PQVGPHPGTDCRNL
Trigger: GAGGTTCCTGCAGTCAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp AGATGGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTaGCATGGCCGCAGGTGGGACCCCACCCAGGTACTGACTGCAGGA +
Preference number: 1 (lower is better)
Translates to: RWPGQECPLHHVCCT*HGRRWDPTQVLTAG
Trigger: TCCTGCAGTCAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp GGCTGCCCGTCTCAGGGCACCAGGGCTCTGAAAGGCAGAAGACCCTaGGCCTGGGGTCAAATTGCAGCCAGGCCCCAAGGATGGGCACCA +
Preference number: 1 (lower is better)
Translates to: GCPSQGTRALKGRRP*AWGQIAARPQGWAP
Trigger: TGGTGCCCATCCTTGGGGCCTGGCTGCAATTTGACCCCAGGCCCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp AGCCCCTTCCCTGGGATCTGGGTGTTGGCAGCAGGACCCGCATCCTaGGTAGGGACACGTGAGGCCAAAGTGGAGGCACGCAGAGGCCGA +
Preference number: 1 (lower is better)
Translates to: SPFPGIWVLAAGPAS*VGTREAKVEARRGR
Trigger: TCGGCCTCTGCGTGCCTCCACTTTGGCCTCACGTGTCCCTACCCAGGATGCGGGTCCTGCTGCCAACACCCAGATCCCAGGGAAGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp AAGTGCAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTaGTTGGCGAGGACTCCGCGAACACACTGGCTGCCGAGCCATCCC +
Preference number: 1 (lower is better)
Translates to: KCRKLPTYCPCEEPW*LARTPRTHWLPSHP
Trigger: GGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp TGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTaGGGAGGCCCCGGCGCTGTCCATTGTGACTGGCCTCCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: WCSAAPPLCRSYTRP*GGPGAVHCDWPPLL
Trigger: CAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 90 bp CTGCCTGGGATTTGCCTGGCTGCCCGTCTCAGGGCACCAGGGCTCTaGAAGGCAGAAGACCCTGGGCCTGGGGTCAAATTGCAGCCAGGC +
Preference number: 1 (lower is better)
Translates to: LPGICLAARLRAPGL*KAEDPGPGVKLQPG
Trigger: GCCTGGCTGCAATTTGACCCCAGGCCCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp CCAATTGCACCCATAGGTCTGAGCTTGGGCCCAGCCCGTCTCTGGTaGGGCAGACCCTGTGGACAAGGTGCCCCAGCTCTGCATCAGCGG +
Preference number: 1 (lower is better)
Translates to: PIAPIGLSLGPARLW*GRPCGQGAPALHQR
Trigger: CCGCTGATGCAGAGCTGGGGCACCTTGTCCACAGGGTCTGCCCCACCAGAGACGGGCTGGGCCCAAGCTCAGACCTATGGGTGCAATTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp GGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTaGTGGTTGGCGAGGACTCCGCGAACACACTGGCTGCCGAGCCAT +
Preference number: 1 (lower is better)
Translates to: GKCRKLPTYCPCEEP*WLARTPRTHWLPSH
Trigger: ATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 90 bp CCAGACGCGATGGTCGTGGTGCTGCAAATCCAAGAGCCCAGGAGCTaGGACCCTGTGATCCTGGGGGCCCCACACACGCTGTACCCTCCT +
Preference number: 1 (lower is better)
Translates to: PDAMVVVLQIQEPRS*DPVILGAPHTLYPP
Trigger: AGGAGGGTACAGCGTGTGTGGGGCCCCCAGGATCACAGGGTCTCAGCTCCTGGGCTCTTGGATTTGCAGCACCACGACCATCGCGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 90 bp CAGCATCTGAGCAGTGGGAGGGGCGTCCACCTGAGTACCCAGTACTaGGTACTGAGGCCTCAGCCATGCCGAGTGGTCTGGCGGCCCTTC +
Preference number: 1 (lower is better)
Translates to: QHLSSGRGVHLSTQY*VLRPQPCRVVWRPF
Trigger: GAAGGGCCGCCAGACCACTCGGCATGGCTGAGGCCTCAGTACTCAGTACTGGGTACTCAGGTGGACGCCCCTCCCACTGCTCAGATGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTaGGAGGAGCCGTGGTGGTTGGCGAGGACTCCGCGAACACACTGG +
Preference number: 1 (lower is better)
Translates to: HNGRGKCRKLPTYCP*EEPWWLARTPRTHW
Trigger: CCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CCACCCTGCCCAGGTGGACACTGTTCTCACAATGGCAGGGGAAAGTaGAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGG +
Preference number: 1 (lower is better)
Translates to: PPCPGGHCSHNGRGK*RKLPTYCPCEEPWW
Trigger: CCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGTCCACCTGGGCAGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp TTGCACCTGCCATGGCCGCAGGTGGGACCCCACCCAGGTACTGACTaGAGGAACCTCACGAGTAGGAGGCAAGCTGACAAGGCAGGACCC +
Preference number: 1 (lower is better)
Translates to: LHLPWPQVGPHPGTD*RNLTSRRQADKAGP
Trigger: GGGTCCTGCCTTGTCAGCTTGCCTCCTACTCGTGAGGTTCCTGCAGTCAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp GCACCAATTGCACCCATAGGTCTGAGCTTGGGCCCAGCCCGTCTCTaGTGGGGCAGACCCTGTGGACAAGGTGCCCCAGCTCTGCATCAG +
Preference number: 1 (lower is better)
Translates to: APIAPIGLSLGPARL*WGRPCGQGAPALHQ
Trigger: CTGATGCAGAGCTGGGGCACCTTGTCCACAGGGTCTGCCCCACCAGAGACGGGCTGGGCCCAAGCTCAGACCTATGGGTGCAATTGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp CCAGGGTACCCAGCAGCACCTCCCGTTCCAACAGACCAGACGCGATaGTCGTGGTGCTGCAAATCCAAGAGCCCAGGAGCTGAGACCCTG +
Preference number: 1 (lower is better)
Translates to: PGYPAAPPVPTDQTR*SWCCKSKSPGAETL
Trigger: CAGGGTCTCAGCTCCTGGGCTCTTGGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGCTGGGTACCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 90 bp CATGTGCCCAGTGCAGAGCCCCAGCTCCGAGAATGGACCAGTGGCTaGCTCAGCAGCTTCCAGAACTTGCCACACACCCACCCCATGTGC +
Preference number: 1 (lower is better)
Translates to: HVPSAEPQLREWTSG*LSSFQNLPHTHPMC
Trigger: GCACATGGGGTGGGTGTGTGGCAAGTTCTGGAAGCTGCTGAGTCAGCCACTGGTCCATTCTCGGAGCTGGGGCTCTGCACTGGGCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CAGGCTCCAGCCCGAGCGCAGCAAGCATCCACCCTGCAGATACACTaGAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGC +
Preference number: 1 (lower is better)
Translates to: QAPARAQQASTLQIH*KTLYDTAQPWAEHS
Trigger: GCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGTGGATGCTTGCTGCGCTCGGGCTGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp GAAAGCCCCCTCAGGCTCCAGCCCGAGCGCAGCAAGCATCCACCCTaGAGATACACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGG +
Preference number: 1 (lower is better)
Translates to: ESPLRLQPERSKHPP*RYTAKLFMTRPSPG
Trigger: CCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGTGGATGCTTGCTGCGCTCGGGCTGGAGCCTGAGGGGGCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 90 bp CAGGTGGACACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTaGCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTTGGCGAGGA +
Preference number: 1 (lower is better)
Translates to: QVDTVLTMAGESAGS*PRTVPARSRGGWRG
Trigger: TCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGTCCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp AGCTCATGTGCCCAGTGCAGAGCCCCAGCTCCGAGAATGGACCAGTaGCTGACTCAGCAGCTTCCAGAACTTGCCACACACCCACCCCAT +
Preference number: 1 (lower is better)
Translates to: SSCAQCRAPAPRMDQ*LTQQLPELATHPPH
Trigger: ATGGGGTGGGTGTGTGGCAAGTTCTGGAAGCTGCTGAGTCAGCCACTGGTCCATTCTCGGAGCTGGGGCTCTGCACTGGGCACATGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 90 bp AGCGCAGCAAGCATCCACCCTGCAGATACACTGCAAAACTCTTTATaGCACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCAT +
Preference number: 1 (lower is better)
Translates to: SAASIHPADTLQNSL*HGPALGRTQPSREH
Trigger: ATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGTGGATGCTTGCTGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 90 bp GTAACCTCCTCAGTAGTTGAATTTCCCATGTTGGCCAGGATGGTCTaGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACAGGATC +
Preference number: 1 (lower is better)
Translates to: VTSSVVEFPMLARMV*ISCSRESPRPADRI
Trigger: GATCCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAACTACTGAGGAGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR TCA 90 bp TCCACCAGCTGGATGACATTTTTGTGCCGTAACCTCCTCAGTAGTTaGATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCG +
Preference number: 1 (lower is better)
Translates to: STSWMTFLCRNLLSS*ISHVGQDGLDLLLS
Trigger: CGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR TCA 90 bp ACATTTTCTGCTTCTCTTCGTTGTATAACACATCCACCAGCTGGATaGCATTTTTGTGCCGTAACCTCCTCAGTAGTTGAATTTCCCATG +
Preference number: 1 (lower is better)
Translates to: TFSASLRCITHPPAG*HFCAVTSSVVEFPM
Trigger: CATGGGAAATTCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR-3UTR GCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGGCTCCGCCCGGGGCTaGGAAGTCAACAAGCCGCGT +
Preference number: 2 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGGSARG*EVNKPR
Trigger: ACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCC...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR TCA 90 bp GCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCCTTGGGGGAGAGGTaGGGGTCCTGCCCTCCGGCC +
Preference number: 2 (lower is better)
Translates to: AKFGRPRPHGTLRVPAASALGER*GSCPPA
Trigger: GGCCGGAGGGCAGGACCCTCACCTCTCCCCCAAGGC...AGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326873.12
3UTR-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTACCTGGCGGGGCTCCTaGACACGGGCTGCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGTWRGS*TRAAGG
Trigger: GCCGCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGT...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp CATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCACCTGGCGGGGCTCCTaGACACGGGCTGCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: HGGHLSGRAGGTGRKTEGTWRGS*TRAAGG
Trigger: GCCGCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGT...GCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPAGRLRA*RGHLAG
Trigger: CCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCC...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGACACGGCCCAGCCCTaGGCCGAACACAGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRDTAQP*AEHSQA
Trigger: GGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACC +
Preference number: 2 (lower is better)
Translates to: AARLPGGAACMAGSGAWSNRQED*GPGAGT
Trigger: GGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTT...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR TCA 90 bp TCCCCTGGGGCACCCTGGCCCATGGTTGGTTCTAGAGGCCCAGGAGCCGCCACAGCGCAGAGGATGGCCTaGCCCGAGGGCGCCGGGCTG +
Preference number: 2 (lower is better)
Translates to: SPGAPWPMVGSRGPGAATAQRMA*PEGAGL
Trigger: CAGCCCGGCGCCCTCGGGTCAGGCCATCCTCTGCGC...TGTGGCGGCTCCTGGGCCTCTAGAACCAACCATGGGCCAGGGTGCCCCAGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: APSESPPRLHHPAMAFLVGRLRA*RGHLAG
Trigger: CCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCC...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
3UTR-3UTR CCA 90 bp ACTCCGCGAACACACTGGCTGCCGAGCCATCCCCGAGGCCCCTCCCGGGCGAAGCTGCAGGGGCGGCCGTaGGGGTCAGCGTGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: TPRTHWLPSHPRGPSRAKLQGRP*GSACGP
Trigger: TGGACCACACGCTGACCCCCACGGCCGCCCCTGCAG...CTTCGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp TGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCGGCAGGACCCTCCCGTaGTCCCCTGGGGCACCCTGG +
Preference number: 2 (lower is better)
Translates to: CPLHHVCCTCHGRRWDPTGRTLP*SPGAPW
Trigger: CCAGGGTGCCCCAGGGGAGCACGGGAGGGTCCTGCC...GGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGC +
Preference number: 2 (lower is better)
Translates to: REGSARGCEVNKPRALPGGGPGA*SAQKHG
Trigger: GCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCC...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGC +
Preference number: 2 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGGGPGA*SAQKHG
Trigger: GCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCC...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCGCGCTCCGGAGGTCCTaGGGCGTGGTCGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSALRRS*GVVGTE
Trigger: TTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGC...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp ACTCCGCGAACACACTGGCTGCCGAGCCATCCCCGAGGCCCCTCCCGGGCGAAGCACGCTGTACCCTCCTaGGGGGCCCCCACATGCTGC +
Preference number: 2 (lower is better)
Translates to: TPRTHWLPSHPRGPSRAKHAVPS*GAPTCC
Trigger: GCAGCATGTGGGGGCCCCCCAGGAGGGTACAGCGTG...CTTCGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACC +
Preference number: 2 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPNRQED*GPGAGT
Trigger: GGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTT...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR GCA 90 bp AAGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAAGTCAACAAGCCGCGTaGACTGCCGGGCGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: KQGDPRAQRRPRREPDPTSQQAA*TAGRPR
Trigger: CCTCGGCCGCCCGGCAGTGCACGCGGCTTGTTGACT...TGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
3UTR-3UTR GCA 90 bp GCTGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAAGGGACTCTCGCAACCTaGCTGGGCTGGCCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: AAQAMPAPGSGPGVSSLKGTLAT*LGWPCP
Trigger: AGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAGTCCC...TTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGC +
Preference number: 2 (lower is better)
Translates to: AARLPGGAACMAGSGAWSGGPGA*SAQKHG
Trigger: GCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCC...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCCTCGGGCCCGGGGGTaGACCCTGTGCACTGGGTCC +
Preference number: 2 (lower is better)
Translates to: EATGGASSLHIKCMEAASPRARG*TLCTGS
Trigger: GGACCCAGTGCACAGGGTCCACCCCCGGGCCCGAGG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp TGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAATGGCAGAGCGCAGAGGATaGCCTGACCCGAGGGCGCCG +
Preference number: 2 (lower is better)
Translates to: CPGHARPRVRPRCIQPEMAERRG*PDPRAP
Trigger: CGGCGCCCTCGGGTCAGGCCATCCTCTGCGCTCTGC...CATTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp GGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCACCTGTCCCCAGCATCTaGGCAGTGGGAGGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: GLGRSVPSTTSVAPAMAAPVPSI*AVGGAS
Trigger: GGACGCCCCTCCCACTGCTCAGATGCTGGGGACAGG...TGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGAGTCAACAAGCCGCGTaGACTGCCGGGCGGCCGAGG +
Preference number: 2 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPSQQAA*TAGRPR
Trigger: CCTCGGCCGCCCGGCAGTGCACGCGGCTTGTTGACT...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR GCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGCACGCAGAGGCCGATaGAGCAGCCCCGGCAGAGCG +
Preference number: 2 (lower is better)
Translates to: ATGGASSLHIKCMEAASLARRGR*SSPGRA
Trigger: CGCTCTGCCGGGGCTGCTGCATCGGCCTCTGCGTGC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: GGAACMAGSGAWSPHPPAVGTEA*RPPLRE
Trigger: CTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGAC...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp AGCCTCACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCGGAGCCCATGCCGAGTGGTCTaGCGGCCCTTCCCCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SLTAACRPTAGGSCCWRSPCRVV*RPFPLL
Trigger: CAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGG...GCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCTGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAATGCCATGGCCGCAGGTaGGACCCCACCCAGGTACTG +
Preference number: 2 (lower is better)
Translates to: AAQAMPAPGSGPGVSSLKCHGRR*DPTQVL
Trigger: CAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCA...TTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CAA 90 bp CCTGCCTGGGCTGGCCCTGCCCTAACTGGCCCTCCTGCCTGGGATTaGCCTGGCTGCCCGTCTCAGGGCACCAGGGCTCTGAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: PAWAGPALTGPPAWD*PGCPSQGTRALKGR
Trigger: TCTGCCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCAGCCCAGGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCACGGCAAGTGTGGCCTaGGCTGAGGGGCGCAACCCC +
Preference number: 2 (lower is better)
Translates to: EATGGASSLHIKCMEAASTASVA*AEGRNP
Trigger: GGGGTTGCGCCCCTCAGCTCAGGCCACACTTGCCGT...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCGGCCAGCCTCACTGCTaGTTGCAGGCCGACAGCCGG +
Preference number: 2 (lower is better)
Translates to: EATGGASSLHIKCMEAASGQPHC*LQADSR
Trigger: CCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCC...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGCGCTCCGGAGGTCCTaGGGCGTGGTCGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: ATGGASSLHIKCMEAASLALRRS*GVVGTE
Trigger: TTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGACTGGCCTCCTCTTCTaGGACCTGTCCTGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPATGLLF*DLSWEG
Trigger: TCCCTCCCAGGACAGGTCCCAGAAGAGGAGGCCAGT...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CAA 90 bp TGCAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTaGGCGAGGACTCCGCGAACACACTGGCTGCCGAGCCATCCCCGA +
Preference number: 2 (lower is better)
Translates to: CRKLPTYCPCEEPWW*ARTPRTHWLPSHPR
Trigger: TCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTGAAAGTGCAGGAAGCTaGCCACGTACTGTCCCTGCG +
Preference number: 2 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVESAGS*PRTVPA
Trigger: CGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTC...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCAGCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTGCTGCAAATCCACCTGGCGGGGCTCCTaGACACGGGCTGCAGGCGGC +
Preference number: 2 (lower is better)
Translates to: AAPPVPTDQTRWSWCCKSTWRGS*TRAAGG
Trigger: GCCGCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGT...GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: EATGGASSLHIKCMEAASVGTEA*RPPLRE
Trigger: CTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGAC...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGCTGGCTGCCAATGTaGGCCGCCCCTACGCTAAGG +
Preference number: 2 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRGWLPM*AAPTLR
Trigger: CCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCC...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
3UTR-3UTR CCA 90 bp GGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTTGATGGCGGGGAGGGGCTaGCTGCCAATGTGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: GKCRKLPTYCPCEEPWWLMAGRG*LPMWAA
Trigger: GGCGGCCCACATTGGCAGCCAGCCCCTCCCCGCCAT...CAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp TGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCCCAGCATCTGAGCAGTaGGAGGGGCGTCCACCTGAG +
Preference number: 2 (lower is better)
Translates to: CPLHHVCCTCHGRRWDPTPASEQ*EGRPPE
Trigger: CTCAGGTGGACGCCCCTCCCACTGCTCAGATGCTGG...GGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGAGTCTCCACATAAAGTaGATGGAGGCCGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPASLHIK*MEAASL
Trigger: GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACT...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp ACCTCACGAGTAGGAGGCAAGCTGACAAGGCAGGACCCTCCCGTGCTCCCCTGGGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAG +
Preference number: 2 (lower is better)
Translates to: TSRVGGKLTRQDPPVLPWVGTEA*RPPLRE
Trigger: CTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGAC...CCAGGGGAGCACGGGAGGGTCCTGCCTTGTCAGCTTGCCTCCTACTCGTGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCACACTCCTGCTTGCTCCGGGTTTTCTCTGGGGTCCCAAGAGCGCAGTGGCCTGCGGGGTCAGGAGCCTaGTCTCCACACCCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: AHSCLLRVFSGVPRAQWPAGSGA*SPHPPA
Trigger: AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGC...AGGCCACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326873.12
3UTR-3UTR CCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAATGGCGGGGAGGGGCTaGCTGCCAATGTGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGMAGRG*LPMWAA
Trigger: GGCGGCCCACATTGGCAGCCAGCCCCTCCCCGCCAT...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
3UTR-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCATGCTGCATCCTCCTaGGGGGCCCCCAGACACTGT +
Preference number: 2 (lower is better)
Translates to: EATGGASSLHIKCMEAASHAASS*GAPRHC
Trigger: ACAGTGTCTGGGGGCCCCCCAGGAGGATGCAGCATG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGTGGGGCAGACCCTGTaGACAAGGTGCCCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: ATGGASSLHIKCMEAASLVGQTL*TRCPSS
Trigger: AGAGCTGGGGCACCTTGTCCACAGGGTCTGCCCCAC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp ACCTCACGAGTAGGAGGCAAGCTGACAAGGCAGGACCCTCCCGTGCTCCCCTGGCTGGGTAGGGACACGTaGGGCCAAAGTGGAGGCACG +
Preference number: 2 (lower is better)
Translates to: TSRVGGKLTRQDPPVLPWLGRDT*GQSGGT
Trigger: CGTGCCTCCACTTTGGCCTCACGTGTCCCTACCCAG...CCAGGGGAGCACGGGAGGGTCCTGCCTTGTCAGCTTGCCTCCTACTCGTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp TGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAATGCCAGGAGCCGCCACATaGTCATCTGTGAGGACACAG +
Preference number: 2 (lower is better)
Translates to: CPGHARPRVRPRCIQPEMPGAAT*SSVRTQ
Trigger: CTGTGTCCTCACAGATGAGCATGTGGCGGCTCCTGG...CATTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp AGCCTCACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCGGAGCGAATGGACCAGTGGCTaGCTCAGCAGCTTCCAGAAC +
Preference number: 2 (lower is better)
Translates to: SLTAACRPTAGGSCCWRSEWTSG*LSSFQN
Trigger: GTTCTGGAAGCTGCTGAGTCAGCCACTGGTCCATTC...GCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGAGTCTCCACATAAAGTaGATGGAGGCCGCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLSLHIK*MEAASL
Trigger: GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACT...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR-3UTR CCA 90 bp TCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTCATACACACGCTCTCGCAACCTGCCTaGGCTGGCCCTGCCCTAACT +
Preference number: 2 (lower is better)
Translates to: SALDLVLSCAASVPFIHTLSQPA*AGPALT
Trigger: AGTTAGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAG...CGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp ACCTCACGAGTAGGAGGCAAGCTGACAAGGCAGGACCCTCCCGTGCTCCCCTGGCTGGGATCTGGGTGTTaGCAGCAGGACCCGCATCCT +
Preference number: 2 (lower is better)
Translates to: TSRVGGKLTRQDPPVLPWLGSGC*QQDPHP
Trigger: AGGATGCGGGTCCTGCTGCCAACACCCAGATCCCAG...CCAGGGGAGCACGGGAGGGTCCTGCCTTGTCAGCTTGCCTCCTACTCGTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCATTAGCCGGGCATGCTaGCGCGCACTTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: EATGGASSLHIKCMEAASISRAC*RALVIP
Trigger: TGGGATTACAAGTGCGCGCCAGCATGCCCGGCTAAT...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp TCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTCATACACACGCCCACCCTGCCCAGGTaGACACTGTTCTCACAATGG +
Preference number: 2 (lower is better)
Translates to: SALDLVLSCAASVPFIHTPTLPR*TLFSQW
Trigger: CCATTGTGAGAACAGTGTCCACCTGGGCAGGGTGGG...CGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp TCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTCATACACACGTTCTGGGACCTGTCCTaGGAGGGAGACGGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: SALDLVLSCAASVPFIHTFWDLS*EGDGKC
Trigger: ACACTTGCCGTCTCCCTCCCAGGACAGGTCCCAGAA...CGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CAA 90 bp AAAGACCTTGGTGAGGAGGCACCAATTGCACCCATAGGTCTGAGCTaGGGCCCAGCCCGTCTCTGGTGGGGCAGACCCTGTGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: KDLGEEAPIAPIGLS*GPARLWWGRPCGQG
Trigger: ACCTTGTCCACAGGGTCTGCCCCACCAGAGACGGGCTGGGCCCAAGCTCAGACCTATGGGTGCAATTGGTGCCTCCTCACCAAGGTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp ACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTGGACGGGGCTCACGCTaGAGCCTGAAGTTGAGCCTG +
Preference number: 2 (lower is better)
Translates to: TVLTMAGESAGSCPRTVPGRGSR*SLKLSL
Trigger: CAGGCTCAACTTCAGGCTTCAGCGTGAGCCCCGTCC...AGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp GACAAGGTGCCCCAGCTCTGCATCAGCGGGCACAGCCGCCACTGGGCCCTTGCCACCCTGCAGATACACTaGAAAACTCTTTATGACACG +
Preference number: 2 (lower is better)
Translates to: DKVPQLCISGHSRHWALATLQIH*KTLYDT
Trigger: CGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGT...GGCAAGGGCCCAGTGGCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCACACTGTTCTCACAATaGCAGGGGAAAGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: ATGGASSLHIKCMEAASLTLFSQ*QGKVQE
Trigger: TTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGT...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR TCA 90 bp GCAGCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTGCTGCAAATCCCCCACCACTTCCCGCTaGAACAGTAAAGCAGAAAGC +
Preference number: 2 (lower is better)
Translates to: AAPPVPTDQTRWSWCCKSPTTSR*NSKAES
Trigger: GCTTTCTGCTTTACTGTTTCAGCGGGAAGTGGTGGG...GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp TCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTCATACACACGAGCAAGCATCCACCCTaGAGATACACTGCAAAACTC +
Preference number: 2 (lower is better)
Translates to: SALDLVLSCAASVPFIHTSKHPP*RYTAKL
Trigger: GAGTTTTGCAGTGTATCTGCAGGGTGGATGCTTGCT...CGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR GCA 90 bp TGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGAGGATCCCATTTCTATaGAATATCCAGGACAAGCCA +
Preference number: 2 (lower is better)
Translates to: CWPGWSGSLALVSHRARPRIPFL*NIQDKP
Trigger: TGGCTTGTCCTGGATATTGCATAGAAATGGGATCCT...CGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR-3UTR CCA 90 bp ATCACCATATACATTTTCTGCTTCTCTTCGTTGTATAACACATCCACCAGCTGGTTGGCCAGGATGGTCTaGATCTCTTGCTCTCGTGAG +
Preference number: 2 (lower is better)
Translates to: ITIYIFCFSSLYNTSTSWLARMV*ISCSRE
Trigger: CTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAA...CCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGAAAATGTATATGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR-3UTR GCA 90 bp CAGTACTCCATCACCATATACATTTTCTGCTTCTCTTCGTTGTATAACACATCCTGGATGACATTTTTGTaGCGTAACCTCCTCAGTAGT +
Preference number: 2 (lower is better)
Translates to: QYSITIYIFCFSSLYNTSWMTFL*RNLLSS
Trigger: ACTACTGAGGAGGTTACGGCACAAAAATGTCATCCA...GGATGTGTTATACAACGAAGAGAAGCAGAAAATGTATATGGTGATGGAGTACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR GCA 72 bp GGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTaGGGCGGGGCCGCCGGACGGCGCTGGGCGCCCTGC +
Preference number: 3 (lower is better)
Translates to: GQEPGLHTRQLV*GGAAGRRWAPC
Trigger: GCAGGGCGCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR TCA 72 bp CCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACCTGGCGGGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PLREGGRNRQED*GPGAGTWRGSW
Trigger: CCAGGAGCCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 72 bp CTCCGGAGGTCCTGGGGCGTGGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGG +
Preference number: 3 (lower is better)
Translates to: LRRSWGVVGTEA*RPPLREGGRNR
Trigger: CCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 72 bp GAGGCCGATGCAGCAGCCCCGGCAGAGCGCAGAGGATaGCCTGACCCGAGGGCGCCGGGCTGTCCTGCCCCA +
Preference number: 3 (lower is better)
Translates to: EADAAAPAERRG*PDPRAPGCPAP
Trigger: TGGGGCAGGACAGCCCGGCGCCCTCGGGTCAGGCCATCCTCTGCGCTCTGCCGGGGCTGCTGCATCGGCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 72 bp CGATGCAGCAGCCCCGGCAGAGCGCAGAGGATGGCCTaGCCCGAGGGCGCCGGGCTGTCCTGCCCCAACGCA +
Preference number: 3 (lower is better)
Translates to: RCSSPGRAQRMA*PEGAGLSCPNA
Trigger: TGCGTTGGGGCAGGACAGCCCGGCGCCCTCGGGTCAGGCCATCCTCTGCGCTCTGCCGGGGCTGCTGCATCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp CCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTaGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGC +
Preference number: 3 (lower is better)
Translates to: PGGAACMAGSGA*SPHPPAGLRRG
Trigger: GCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR CCA 72 bp GAGCCGTGGTGGTTGGCGAGGACTCCGCGAACACACTaGCTGCCGAGCCATCCCCGAGGCCCCTCCCGGGCG +
Preference number: 3 (lower is better)
Translates to: EPWWLARTPRTH*LPSHPRGPSRA
Trigger: CGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp CCTTGCGGGCAGGGTTGGGGGCCCGGCCCTCCGCCCTaGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGT +
Preference number: 3 (lower is better)
Translates to: PCGQGWGPGPPP*IWCSAAPPLCR
Trigger: ACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCCCCCAACCCTGCCCGCAAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp AAGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATaGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAG +
Preference number: 3 (lower is better)
Translates to: KRPRGFQVALHA*RGQEPGLHTRQ
Trigger: CTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR GCA 72 bp ACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTaGTGGCGGAGCAGGCCTTGCGGGCAGGGTTGGGGG +
Preference number: 3 (lower is better)
Translates to: TAACRPTAGGSC*WRSRPCGQGWG
Trigger: CCCCCAACCCTGCCCGCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp TCACACAGGCCTGAGGGTCCCCAGGAGGGAAGCCAGTaGCGGGTCCTGGCTCAGGGATCCTGGCCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: SHRPEGPQEGSQ*RVLAQGSWPAG
Trigger: CCCTGCAGGCCAGGATCCCTGAGCCAGGACCCGGCACTGGCTTCCCTCCTGGGGACCCTCAGGCCTGTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp CCAGGCTCGGGCCAGGCTCAGGCCAGGCACGCGAAATaGCAGCACAGAACCACGCGGGGAGCAGAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: PGSGQAQARHAK*QHRTTRGAELS
Trigger: GCTGAGCTCTGCTCCCCGCGTGGTTCTGTGCTGGCATTTCGCGTGCCTGGCCTGAGCCTGGCCCGAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp TGGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTaGACCTGCCATGGCCGCAGGTGGGACCCCACCCAG +
Preference number: 3 (lower is better)
Translates to: WPGQECPLHHVC*TCHGRRWDPTQ
Trigger: CTGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp CCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTaGCGTTCATACACACGGCCTTGGGGAGGCCCCGGC +
Preference number: 3 (lower is better)
Translates to: PPWIWCSAAPPL*RSYTRPWGGPG
Trigger: GCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp GGGGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTCATACACACGGCCTTG +
Preference number: 3 (lower is better)
Translates to: GARPSALDLVLS*AASVPFIHTAL
Trigger: CAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp GGGCCCCCACTATTCTGGGACCCTCGGGCCCGGGGGTaGACCCTGTGCACTGGGTCCTCACATCCCAACCTG +
Preference number: 3 (lower is better)
Translates to: GPPLFWDPRARG*TLCTGSSHPNL
Trigger: CAGGTTGGGATGTGAGGACCCAGTGCACAGGGTCCACCCCCGGGCCCGAGGGTCCCAGAATAGTGGGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CAA 90 bp GGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCACCTCCTGCCTGGGATTaGCCTGGCTGCCCGTCTCAG +
Preference number: 3 (lower is better)
Translates to: GLGRSVPSTTSVAPAMAAPPAWD*PGCPSQ
Trigger: CTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGG...TGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CAA 90 bp TGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAATGGAGGAGCCGTGGTGGTaGGCGAGGACTCCGCGAACA +
Preference number: 3 (lower is better)
Translates to: CPGHARPRVRPRCIQPEMEEPWW*ARTPRT
Trigger: TGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTC...CATTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 72 bp CACACGGCCTTGGGGAGGCCCCGGCGCTGTCCATTGTaGCTGGCCTCCTCTTCTGGGACCTGTCCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: HTALGRPRRCPL*LASSSGTCPGR
Trigger: CCTCCCAGGACAGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp GGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTaGCATGGCCGCAGGTGGGACCCCACCCAGGTACTG +
Preference number: 3 (lower is better)
Translates to: GQECPLHHVCCT*HGRRWDPTQVL
Trigger: CAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp TGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTTaGCGAGGACTCCGCGAACACACTGGCTGCCGAGCC +
Preference number: 3 (lower is better)
Translates to: CPRTVPARSRGG*RGLREHTGCRA
Trigger: GGCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp GCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTaGGGAGGCCCCGGCGCTGTCCATTGTGACTGGCCT +
Preference number: 3 (lower is better)
Translates to: AAPPLCRSYTRP*GGPGAVHCDWP
Trigger: AGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CAA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGGAGGCTGAGGCAGAATaGCTTGAATCCGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPAEAEAE*LESGRW
Trigger: CCACCTCCCGGATTCAAGCAATTCTGCCTCAGCCTC...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp TCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTaGACCATCCCGCGATGGCGTTTCTCGTGTTTTTCT +
Preference number: 3 (lower is better)
Translates to: SPARHPPSPRRV*TIPRWRFSCFS
Trigger: AGAAAAACACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
3UTR GCA 72 bp CCAGTAGGGACTCTCGCAACCTGCCTGGGCTGGCCCTaGCCTAACTGGCCCTCCTGCCTGGGATTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: PVGTLATCLGWP*PNWPSCLGFAW
Trigger: CCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAGTCCCTACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp CCCTGCCCTAACTGGCCCTCCTGCCTGGGATTTGCCTaGCTGCCCGTCTCAGGGCACCAGGGCTCTGAAAGG +
Preference number: 3 (lower is better)
Translates to: PCPNWPSCLGFA*LPVSGHQGSER
Trigger: CCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp AAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTaGTTGGCGAGGACTCCGCGAACACACTGGCTGCCG +
Preference number: 3 (lower is better)
Translates to: KLPTYCPCEEPW*LARTPRTHWLP
Trigger: CGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp GCCCCGGCGCTGTCCATTGTGACTGGCCTCCTCTTCTaGGACCTGTCCTGGGAGGGAGACGGCAAGTGTGGC +
Preference number: 3 (lower is better)
Translates to: APALSIVTGLLF*DLSWEGDGKCG
Trigger: GCCACACTTGCCGTCTCCCTCCCAGGACAGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 72 bp GTTCTAGAGGCCCAGGAGCCGCCACATGCTCATCTGTaGGGACACAGGAGGGCCAGGCTCGGGCCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: VLEAQEPPHAHL*GHRRARLGPGS
Trigger: TGAGCCTGGCCCGAGCCTGGCCCTCCTGTGTCCTCACAGATGAGCATGTGGCGGCTCCTGGGCCTCTAGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp AAAAACCAAAGCGGCCGCGCGGCTTCCAGGTGGCGCTaGATGCATGGCGGGGTCAGGAGCCTGGTCTCCACA +
Preference number: 3 (lower is better)
Translates to: KNQSGRAASRWR*MHGGVRSLVST
Trigger: TGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCTTTGGTTTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
3UTR GCA 72 bp GCCCTAACTGGCCCTCCTGCCTGGGATTTGCCTGGCTaGCCGTCTCAGGGCACCAGGGCTCTGAAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: ALTGPPAWDLPG*PSQGTRALKGR
Trigger: TCTGCCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp AGGGGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTaGGAGGAGCCGTGGTGGTTGGCGAGGACTCCGCGA +
Preference number: 3 (lower is better)
Translates to: RGKCRKLPTYCP*EEPWWLARTPR
Trigger: TCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp CCTGGGATCTGGGTGTTGGCAGCAGGACCCGCATCCTaGGTAGGGACACGTGAGGCCAAAGTGGAGGCACGC +
Preference number: 3 (lower is better)
Translates to: PGIWVLAAGPAS*VGTREAKVEAR
Trigger: GCGTGCCTCCACTTTGGCCTCACGTGTCCCTACCCAGGATGCGGGTCCTGCTGCCAACACCCAGATCCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp AGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTaGTGGTTGGCGAGGACTCCGCGAACACACTGGCTG +
Preference number: 3 (lower is better)
Translates to: RKLPTYCPCEEP*WLARTPRTHWL
Trigger: CAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp GGCACCAGGGCTCTGAAAGGCAGAAGACCCTGGGCCTaGGGTCAAATTGCAGCCAGGCCCCAAGGATGGGCA +
Preference number: 3 (lower is better)
Translates to: GTRALKGRRPWA*GQIAARPQGWA
Trigger: TGCCCATCCTTGGGGCCTGGCTGCAATTTGACCCCAGGCCCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CAA 90 bp GGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTTGGGGCCTGGGGTCAAATaGCAGCCAGGCCCCAAGGAT +
Preference number: 3 (lower is better)
Translates to: GKCRKLPTYCPCEEPWWLGPGVK*QPGPKD
Trigger: ATCCTTGGGGCCTGGCTGCAATTTGACCCCAGGCCC...CAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR-3UTR CAA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCTATTTATTGCCAAATTaGGGCGGCCTCGCCCGCACG +
Preference number: 3 (lower is better)
Translates to: ATGGASSLHIKCMEAASLYLLPN*GGLART
Trigger: CGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAATA...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
3UTR TCA 72 bp ATGGTCGTGGTGCTGCAAATCCAAGAGCCCAGGAGCTaGGACCCTGTGATCCTGGGGGCCCCACACACGCTG +
Preference number: 3 (lower is better)
Translates to: MVVVLQIQEPRS*DPVILGAPHTL
Trigger: CAGCGTGTGTGGGGCCCCCAGGATCACAGGGTCTCAGCTCCTGGGCTCTTGGATTTGCAGCACCACGACCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 72 bp AGCAGTGGGAGGGGCGTCCACCTGAGTACCCAGTACTaGGTACTGAGGCCTCAGCCATGCCGAGTGGTCTGG +
Preference number: 3 (lower is better)
Translates to: SSGRGVHLSTQY*VLRPQPCRVVW
Trigger: CCAGACCACTCGGCATGGCTGAGGCCTCAGTACTCAGTACTGGGTACTCAGGTGGACGCCCCTCCCACTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp CCATGGCCGCAGGTGGGACCCCACCCAGGTACTGACTaGAGGAACCTCACGAGTAGGAGGCAAGCTGACAAG +
Preference number: 3 (lower is better)
Translates to: PWPQVGPHPGTD*RNLTSRRQADK
Trigger: CTTGTCAGCTTGCCTCCTACTCGTGAGGTTCCTGCAGTCAGTACCTGGGTGGGGTCCCACCTGCGGCCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp TCTCAGGGCACCAGGGCTCTGAAAGGCAGAAGACCCTaGGCCTGGGGTCAAATTGCAGCCAGGCCCCAAGGA +
Preference number: 3 (lower is better)
Translates to: SQGTRALKGRRP*AWGQIAARPQG
Trigger: TCCTTGGGGCCTGGCTGCAATTTGACCCCAGGCCCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCCCTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 72 bp ATTTGCCTGGCTGCCCGTCTCAGGGCACCAGGGCTCTaGAAGGCAGAAGACCCTGGGCCTGGGGTCAAATTG +
Preference number: 3 (lower is better)
Translates to: ICLAARLRAPGL*KAEDPGPGVKL
Trigger: CAATTTGACCCCAGGCCCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp GCCCGAGCGCAGCAAGCATCCACCCTGCAGATACACTaGAAAACTCTTTATGACACGGCCCAGCCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: ARAQQASTLQIH*KTLYDTAQPWA
Trigger: GGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGTGGATGCTTGCTGCGCTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp CCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTaGTGCAAATCCAAGAGCCCAGGAGCTGAGACCCTG +
Preference number: 3 (lower is better)
Translates to: PPVPTDQTRWSW*CKSKSPGAETL
Trigger: CAGGGTCTCAGCTCCTGGGCTCTTGGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp ATACACTGCAAAACTCTTTATGACACGGCCCAGCCCTaGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGG +
Preference number: 3 (lower is better)
Translates to: IHCKTLYDTAQP*AEHSQAGSMAG
Trigger: CCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGTGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp GCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTaGTGCTGCAAATCCAAGAGCCCAGGAGCTGAGACC +
Preference number: 3 (lower is better)
Translates to: APPVPTDQTRWS*CCKSKSPGAET
Trigger: GGTCTCAGCTCCTGGGCTCTTGGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp CCAGCAGCACCTCCCGTTCCAACAGACCAGACGCGATaGTCGTGGTGCTGCAAATCCAAGAGCCCAGGAGCT +
Preference number: 3 (lower is better)
Translates to: PAAPPVPTDQTR*SWCCKSKSPGA
Trigger: AGCTCCTGGGCTCTTGGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CCA 72 bp GCCCAGTGCAGAGCCCCAGCTCCGAGAATGGACCAGTaGCTGACTCAGCAGCTTCCAGAACTTGCCACACAC +
Preference number: 3 (lower is better)
Translates to: AQCRAPAPRMDQ*LTQQLPELATH
Trigger: GTGTGTGGCAAGTTCTGGAAGCTGCTGAGTCAGCCACTGGTCCATTCTCGGAGCTGGGGCTCTGCACTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR TCA 72 bp CATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTaGGTCACCGCGCCCGGCCGACAGGATCCCATTTCT +
Preference number: 3 (lower is better)
Translates to: HVGQDGLDLLLS*VTAPGRQDPIS
Trigger: AGAAATGGGATCCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR GCA 72 bp ACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTaGCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: TVLTMAGESAGS*PRTVPARSRGG
Trigger: ACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp GAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTaGTCTCGTGAGTCACCGCGCCCGGCCGACAGGATC +
Preference number: 3 (lower is better)
Translates to: EFPMLARMVWIS*SRESPRPADRI
Trigger: GATCCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR TCA 72 bp AGCATCCACCCTGCAGATACACTGCAAAACTCTTTATaGCACGGCCCAGCCCTGGGCCGAACACAGCCAAGC +
Preference number: 3 (lower is better)
Translates to: SIHPADTLQNSL*HGPALGRTQPS
Trigger: GCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGTGGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR GCA 72 bp GAGTCACCGCGCCCGGCCGACAGGATCCCATTTCTATaGAATATCCAGGACAAGCCAATCCAGAGCCAGGAA +
Preference number: 3 (lower is better)
Translates to: ESPRPADRIPFL*NIQDKPIQSQE
Trigger: TTCCTGGCTCTGGATTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGGCGCGGTGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR CCA 72 bp TCAGTAGTTGAATTTCCCATGTTGGCCAGGATGGTCTaGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCC +
Preference number: 3 (lower is better)
Translates to: SVVEFPMLARMV*ISCSRESPRPA
Trigger: GGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAACTACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR TCA 72 bp TGGATGACATTTTTGTGCCGTAACCTCCTCAGTAGTTaGATTTCCCATGTTGGCCAGGATGGTCTGGATCTC +
Preference number: 3 (lower is better)
Translates to: WMTFLCRNLLSS*ISHVGQDGLDL
Trigger: GAGATCCAGACCATCCTGGCCAACATGGGAAATTCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR TCA 72 bp GCTTCTCTTCGTTGTATAACACATCCACCAGCTGGATaGCATTTTTGTGCCGTAACCTCCTCAGTAGTTGAA +
Preference number: 3 (lower is better)
Translates to: ASLRCITHPPAG*HFCAVTSSVVE
Trigger: TTCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR CCA 72 bp TTCTGCTTCTCTTCGTTGTATAACACATCCACCAGCTaGATGACATTTTTGTGCCGTAACCTCCTCAGTAGT +
Preference number: 3 (lower is better)
Translates to: FCFSSLYNTSTS*MTFLCRNLLSS
Trigger: ACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCACCTGGCGGGGCTCCTaGACACGGGCTGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGTWRGS*TRAAGG
Trigger: GCCGCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGT...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGCAATCTCGGGCGGCTaGAAAGCCGGGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGAISGG*KAGEPW
Trigger: CCAGGGCTCCCCGGCTTTCCAGCCGCCCGAGATTGC...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp TTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCAGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FGRPRPHGTLRVPAASAPGRLRA*RGHLAG
Trigger: CCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCC...TGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp TTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCAGGGTGCCACCGGTGGTaGGCAGCAGGTTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: FGRPRPHGTLRVPAASAPGCHRW*AAGSPA
Trigger: AGCCGGGGAACCTGCTGCTCACCACCGGTGGCACCC...TGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp AGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGAAGGCGGCCGCGACGTaGGCCCGACCCCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: SRVTRERKGGRDVSPTPQKAAAT*ARPHSP
Trigger: GGGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTT...CTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGGCGCAGAGGATGGCCTaGCCCGAGGGCGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPAAQRMA*PEGAGL
Trigger: CAGCCCGGCGCCCTCGGGTCAGGCCATCCTCTGCGC...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGGCCGCGGCAGCAAGTaGCGCCACCCGCGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGGRGSK*RHPRSL
Trigger: AAGGGAGCGCGGGTGGCGGCACTTGCTGCCGCGGCC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGRLRA*RGHLAG
Trigger: CCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLGRLRA*RGHLAG
Trigger: CCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCC...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGVGTEA*RPPLRE
Trigger: CTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGAC...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCCTCGGGCCCGGGGGTaGACCCTGTGCACTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGPRARG*TLCTGS
Trigger: GGACCCAGTGCACAGGGTCCACCCCCGGGCCCGAGG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGCAGGACCCGCATCCTaGGTAGGGACACGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGAGPAS*VGTREA
Trigger: GGCCTCACGTGTCCCTACCCAGGATGCGGGTCCTGC...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCCGGCGCTGTCCATTGTaGCTGGCCTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGRRCPL*LASSSG
Trigger: CCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCG...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR TCA 90 bp TGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: CQIWAASPARHPPSPRRVNRQED*GPGAGT
Trigger: GGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTT...GACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGCCGCCAAAGCAGGGTaGCCCGAGAGCGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRAAKAG*PESAKA
Trigger: CGCCTTTGCGCTCTCGGGTCACCCTGCTTTGGCGGC...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp ACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCCCTGTCCCCAGCATCTaGGCAGTGGGAGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: TAQPWAEHSQAGSMAGRGPVPSI*AVGGAS
Trigger: GGACGCCCCTCCCACTGCTCAGATGCTGGGGACAGG...GCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCCTGGGTAGGGACACGTaGGGCCAAAGTGGAGGCACG +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGLGRDT*GQSGGT
Trigger: CGTGCCTCCACTTTGGCCTCACGTGTCCCTACCCAG...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGACGGCAAGTGTGGCCTaGGCTGAGGGGCGCAACCCC +
Preference number: 4 (lower is better)
Translates to: GPALGRTQPSREHGGEGLTASVA*AEGRNP
Trigger: GGGGTTGCGCCCCTCAGCTCAGGCCACACTTGCCGT...CAGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp AGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCCGAGTCCAAGCCCGGTaGAGGGTCTGCGGACCGGCG +
Preference number: 4 (lower is better)
Translates to: RVTRERKGGRDVSPTPQPRVQAR*RVCGPA
Trigger: CGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCG...GGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCAGTCAACAAGCCGCGTaGACTGCCGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRSQQAA*TAGRPR
Trigger: CCTCGGCCGCCCGGCAGTGCACGCGGCTTGTTGACT...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGCACGCAGAGGCCGATaGAGCAGCCCCGGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGARRGR*SSPGRA
Trigger: CGCTCTGCCGGGGCTGCTGCATCGGCCTCTGCGTGC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCCCGGGCCTCAGAACTaGGAGACGGCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNPGPQN*ETARSG
Trigger: CCCTGACCGGGCCGTCTCCCAGTTCTGAGGCCCGGG...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp TTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCAAAAGCCGGGGAGCCCTaGCTGGTCCGGCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: FGRPRPHGTLRVPAASAPKAGEP*LVRQVS
Trigger: CGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTT...TGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp GGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCCCGCAATCTCGGGCGGCTaGAAAGCCGGGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GDPRAQRRPRREPDPTAPAISGG*KAGEPW
Trigger: CCAGGGCTCCCCGGCTTTCCAGCCGCCCGAGATTGC...GGGGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGCGCGCGGCTTCCAGGTaGCGCTGCATGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRRAASR*RCMHGG
Trigger: CCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCCCCTGCGAGGAGCCGTaGTGGTTGGCGAGGACTCCG +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRPCEEP*WLARTP
Trigger: CGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGG...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCAGGCCGTCAATCAGCTaGCAGAAGTACCCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGRPSIS*QKYPWA
Trigger: GGCCCACGGGTACTTCTGTCAGCTGATTGACGGCCT...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCAAGGATGGGCACCATaGGGGGCCCCCACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGQGWAP*GAPTSQ
Trigger: CTGGGAGGTGGGGGCCCCTCATGGTGCCCATCCTTG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTCCGCCGCGAACGGGTaGAGTGCCTCGGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: APSESPPRLHHPAMAFLVSAANG*SASATP
Trigger: GGGCGTGGCCGAGGCACTGCACCCGTTCGCGGCGGA...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGATCCGCCGCGAACGGGTaGAGTGCCTCGGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGSAANG*SASATP
Trigger: GGGCGTGGCCGAGGCACTGCACCCGTTCGCGGCGGA...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp AGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCGCCGGCGGATCTTGCTaGTGGCGGAGCAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: RVTRERKGGRDVSPTPQPAGGSC*WRSRPC
Trigger: GCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCCGGC...GGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGCCAGCCTCACTGCTaGTTGCAGGCCGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGQPHC*LQADSR
Trigger: CCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGGCCAGCCTCACTGCTaGTTGCAGGCCGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGGQPHC*LQADSR
Trigger: CCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGCGGCCAGCCTCACTaGTGCTTGCAGGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGGQPH*CLQADS
Trigger: GCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCCGCC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCAGTCAACAAGCCGCGTaGACTGCCGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: HGGHLSGRAGGTGRKTEGSQQAA*TAGRPR
Trigger: CCTCGGCCGCCCGGCAGTGCACGCGGCTTGTTGACT...GCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp TGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCGGCTCCGCCCGGGGCTaGGAAGTCAACAAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: CQIWAASPARHPPSPRRVGSARG*EVNKPR
Trigger: ACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCC...GACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCCAGGTGGCGCTGCATaGATGGCGGGGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCPGGAA*MAGSGA
Trigger: GGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGG...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCCCGCTTCCAGGTGGCGCTaGATGCATGGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GDPRAQRRPRREPDPTAPASRWR*MHGGVR
Trigger: CCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC...GGGGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGCTTCCAGGTGGCGCTaGATGCATGGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRASRWR*MHGGVR
Trigger: CCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCAGTCCCCGCCGCGTCTaGACCATCCCGCGATGGCGT +
Preference number: 4 (lower is better)
Translates to: HGGHLSGRAGGTGRKTEGSPRRV*TIPRWR
Trigger: ACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACT...GCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGAGGCCTCAGCCATaGCGAGTGGTCTGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGLRPQP*RVVWRP
Trigger: GGGCCGCCAGACCACTCGGCATGGCTGAGGCCTCAG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCAGAGCCCAACTTCGCTaGGGGCGTCTCCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCRAQLR*GRLRRR
Trigger: GCGTCGCCGGAGACGCCCCCAGCGAAGTTGGGCTCT...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTCCGGGGAGCCCTGGCTaGTCCGGCAGGTGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTPGSPG*SGRCRP
Trigger: CGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGG...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCAAAGCCGGGGAGCCCTaGCTGGTCCGGCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCKAGEP*LVRQVS
Trigger: CGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTT...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTCACAGTCGCCCGGGATaGCGTAGCTCCCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: RPSPGPNTAKPGAWRGGAHSRPG*RSSPSR
Trigger: TCGGGAAGGGGAGCTACGCCATCCCGGGCGACTGTG...AGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCTCATACACACGGCCTTaGGGAGGCCCCGGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRSYTRP*GGPGAV
Trigger: GACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGA...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGGCGGATCTTGCTGCTaGCGGAGCAGGCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLGGSCC*RSRPCG
Trigger: CCCGCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCC...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000585465.2
CDS-3UTR CCA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGACCTGGCGGGGCTCCTaGACACGGGCTGCAGGCGGC +
Preference number: 4 (lower is better)
Translates to: APSESPPRLHHPAMAFLVTWRGS*TRAAGG
Trigger: GCCGCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGT...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGCGCTCCGGAGGTCCTaGGGCGTGGTCGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGALRRS*GVVGTE
Trigger: TTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCGCGCTCCGGAGGTCCTaGGGCGTGGTCGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGALRRS*GVVGTE
Trigger: TTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGC...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCACGCTGTACCCTCCTaGGGGGCCCCCACATGCTGC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCHAVPS*GAPTCC
Trigger: GCAGCATGTGGGGGCCCCCCAGGAGGGTACAGCGTG...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGCCAGTGCCGGGTCCTaGCTCAGGGATCCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGASAGS*LRDPGL
Trigger: CAGGCCAGGATCCCTGAGCCAGGACCCGGCACTGGC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGCGCGGCTGGTAGATaGCCTCGGTGGAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGAAGR*PRWSRC
Trigger: GCATCGACTCCACCGAGGTCATCTACCAGCCGCGCC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGGGCGCGGCTGGTAGATaGCCTCGGTGGAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRGAAGR*PRWSRC
Trigger: GCATCGACTCCACCGAGGTCATCTACCAGCCGCGCC...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTNRQED*GPGAGT
Trigger: GGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTT...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR TCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGGCCTTGGGGGAGAGGTaGGGGTCCTGCCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPALGER*GSCPPA
Trigger: GGCCGGAGGGCAGGACCCTCACCTCTCCCCCAAGGC...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGGGCCGCGGCAGCAAGTaGCGCCACCCGCGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPGRGSK*RHPRSL
Trigger: AAGGGAGCGCGGGTGGCGGCACTTGCTGCCGCGGCC...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCCACGTCAGTCCCGGCTaGGAGTCCAAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: HGGHLSGRAGGTGRKTEGHVSPG*ESKPGA
Trigger: TGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTG...GCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGGTCCACCACCTCCATaGTGGACCCAGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RPSPGPNTAKPGAWRGGAGPPPP*WTQGPG
Trigger: TCCAGGACCCTGGGTCCAGCATGGAGGTGGTGGACC...AGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGAACATGCCCAGCTaGTGCGGGTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRVNMPS*CGSTTS
Trigger: GGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCAC...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGGTGAACATGCCCAGCTaGTGCGGGTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: GPALGRTQPSREHGGEGLVNMPS*CGSTTS
Trigger: GGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCAC...CAGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp CGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTCGGAACCAGCTGTGCTaGCGGATCTGCCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RPSPGPNTAKPGAWRGGARNQLC*RICRME
Trigger: CTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCG...AGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTTCCTCGTCCGCGCCGTaGAGGTCCTCCAAGTACGGC +
Preference number: 4 (lower is better)
Translates to: AKFGRPRPHGTLRVPAASSSSAP*RSSKYG
Trigger: GCCGTACTTGGAGGACCTGCACGGCGCGGACGAGGA...AGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp TTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCAGCTGCGCCGCCTCTGTaGCGTTCATACACACGGCCT +
Preference number: 4 (lower is better)
Translates to: FGRPRPHGTLRVPAASAPAAPPL*RSYTRP
Trigger: AGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGC...TGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGAGCCTCACTGCTGCTTaGAGGCCGACAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLSLTAA*RPTAGG
Trigger: TCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTGGCCAGCCTCACTGCTaGTTGCAGGCCGACAGCCGG +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVGQPHC*LQADSR
Trigger: CCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCC...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCGGCGGCCAGCCTCACTaGTGCTTGCAGGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSGGQPH*CLQADS
Trigger: GCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCCGCC...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGCCGGCGGATCTTGCTaGTGGCAGCAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GTEAWRPPLREGGRNRQEAGGSC*WQQALR
Trigger: CCGCAAGGCCTGCTGCCAGCAGCAAGATCCGCCGGC...TTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS-3UTR GCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCGCTCTAAGCCCTaGCTCAGACGCCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGLRSKP*LRRLLA
Trigger: GGCGAGGAGGCGTCTGAGGCAGGGCTTAGAGCGGAG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGAGGCCGCCCCGGGCTaGCCCAGAGCTCATGTGCCC +
Preference number: 4 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPEAAPG*PRAHVP
Trigger: GGGCACATGAGCTCTGGGGCAGCCCGGGGCGGCCTC...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp TCCCCTGGGGCACCCTGGCCCATGGTTGGTTCTAGAGGCCCAGGAGCCGCCACAGGCAGGACCCTCCCGTaGTCCCCTGGGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SPGAPWPMVGSRGPGAATGRTLP*SPGAPW
Trigger: CCAGGGTGCCCCAGGGGAGCACGGGAGGGTCCTGCC...TGTGGCGGCTCCTGGGCCTCTAGAACCAACCATGGGCCAGGGTGCCCCAGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGACCCGGGCCTCAGAACTaGGAGACGGCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGPGPQN*ETARSG
Trigger: CCCTGACCGGGCCGTCTCCCAGTTCTGAGGCCCGGG...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGGGCCTGGCACACTaGGAAACGCTTCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRVGLAH*ETLLRH
Trigger: GTGCCGGAGAAGCGTTTCCCAGTGTGCCAGGCCCAC...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCCGGGGAGCCCTGGCTaGTCCGGCAGGTGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLPGSPG*SGRCRP
Trigger: CGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCCCGGGGAGCCCTGGCTaGTCCGGCAGGTGTCGTCCG +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGPGSPG*SGRCRP
Trigger: CGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGG...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp GGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCCCAGGTGTCCAGGCCGTTaGCAATCTCGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GDPRAQRRPRREPDPTAPRCPGR*QSRAAG
Trigger: TCCAGCCGCCCGAGATTGCCAACGGCCTGGACACCT...GGGGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCAGGTGTCCAGGCCGTTaGCAATCTCGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRRCPGR*QSRAAG
Trigger: TCCAGCCGCCCGAGATTGCCAACGGCCTGGACACCT...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGCACAGTCGCCCGGGATaGCGTAGCTCCCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRHSRPG*RSSPSR
Trigger: TCGGGAAGGGGAGCTACGCCATCCCGGGCGACTGTG...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCCCGGTCCTTGGTGTCTaGGCTCGGTGGGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGPVLGV*ARWDGH
Trigger: GTGCCCATCCCACCGAGCCCAGACACCAAGGACCGG...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp AGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCTCATACACACGGCCTTaGGGAGGCCCCGGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: RVTRERKGGRDVSPTPQPSYTRP*GGPGAV
Trigger: GACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGA...GGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCCTCCGCCCTGGATTTaGTGCTCAGCTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGPPPWI*CSAAPP
Trigger: AGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp AGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCGGCCCTCCGCCCTaGATTTGGTGCTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: SRVTRERKGGRDVSPTPQPGPPP*IWCSAA
Trigger: CGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGG...CTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCVGTEA*RPPLRE
Trigger: CTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGAC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGGPGA*SAQKHG
Trigger: GCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGCGGGGTCAGGAGCCTaGTCTCCACACCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSAGSGA*SPHPPA
Trigger: AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGC...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTGTGGCGCTGCATGCATaGCGGGGTCAGGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGVALHA*RGQEPG
Trigger: ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCAC...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGTGGCGCTGCATGCATaGCGGGGTCAGGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGVALHA*RGQEPG
Trigger: ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCAC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTCGCGCGGCTTCCAGGTaGCGCTGCATGCATGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGAACMAGSGAWSPHPPARAASR*RCMHGG
Trigger: CCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp GACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGGCTGCCAATGTaGGCCGCCCCTACGCTAAGG +
Preference number: 4 (lower is better)
Translates to: DTAQPWAEHSQAGSMAGRGWLPM*AAPTLR
Trigger: CCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCC...CCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR CCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAATGGCGGGGAGGGGCTaGCTGCCAATGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGMAGRG*LPMWAA
Trigger: GGCGGCCCACATTGGCAGCCAGCCCCTCCCCGCCAT...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR CCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTCCATGCCGAGTGGTCTaGCGGCCCTTCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVPCRVV*RPFPLL
Trigger: CAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGG...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGCAGAGCGCAGAGGATaGCCTGACCCGAGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTAERRG*PDPRAP
Trigger: CGGCGCCCTCGGGTCAGGCCATCCTCTGCGCTCTGC...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp ACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCACTCCGCGAACACACTaGCTGCCGAGCCATCCCCGA +
Preference number: 4 (lower is better)
Translates to: TAQPWAEHSQAGSMAGRGTPRTH*LPSHPR
Trigger: TCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGT...GCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CAA 72 bp TGGACACGGGCTGCAGGCGGCCAGCCTCACTGCTGCTaGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCG +
Preference number: 4 (lower is better)
Translates to: WTRAAGGQPHCC*QADSRRILLLA
Trigger: CGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCCGCCTGCAGCCCGTGTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGGCCCACGGACAAGTATaGACACGGCCGAGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRAHGQV*TRPSAV
Trigger: GACTGCGCTCGGCCGTGTTCATACTTGTCCGTGGGC...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGGGGTGCCACCGGTGGTaGGCAGCAGGTTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPGCHRW*AAGSPA
Trigger: AGCCGGGGAACCTGCTGCTCACCACCGGTGGCACCC...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCGAGTCCAAGCCCGGTaGAGGGTCTGCGGACCGGCG +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLRVQAR*RVCGPA
Trigger: CGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp AATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACGGTCCACCACCTCCATaGTGGACCCAGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: NLGGLARTAPSESPPRLHGPPPP*WTQGPG
Trigger: TCCAGGACCCTGGGTCCAGCATGGAGGTGGTGGACC...GTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCTCCGCCGCGAACGGGTaGAGTGCCTCGGCCACGCCC +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASSAANG*SASATP
Trigger: GGGCGTGGCCGAGGCACTGCACCCGTTCGCGGCGGA...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGAACCAGCTGTGCTaGCGGATCTGCCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNRNQLC*RICRME
Trigger: CTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCG...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp ACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCGCACCACAGTCATGCTaGGCCACCGGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TAQPWAEHSQAGSMAGRGAPQSC*ATGPWC
Trigger: ACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGC...GCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGACGGCACCACAGTCATaGTGCGCCACCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRTAPQS*CATGPW
Trigger: CCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGT...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGCTGCGCCGCCTCTGTaGCGTTCATACACACGGCCT +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGAAPPL*RSYTRP
Trigger: AGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCGCTTCCAGGTGGCGCTaGATGCATGGCGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSASRWR*MHGGVR
Trigger: CCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGTGGGATTTGCCTGGCTaGCCGTCTCAGGGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLWDLPG*PSQGTR
Trigger: CCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCA...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGCGGCCCTTCCCCCTaGTGGGTACTCCTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GGAACMAGSGAWSPHPPAGGPSP*WVLLLT
Trigger: GGTGAGGAGGAGTACCCAGCAGGGGGAAGGGCCGCC...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGCCACCACCTCCATGCTaGACCCAGGGTCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRPPPPC*TQGPGV
Trigger: GACTCCAGGACCCTGGGTCCAGCATGGAGGTGGTGG...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCCACCACCTCCATGCTaGACCCAGGGTCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGPPPPC*TQGPGV
Trigger: GACTCCAGGACCCTGGGTCCAGCATGGAGGTGGTGG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAAAAGCCGGGGAGCCCTaGCTGGTCCGGCAGGTGTCG +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGKAGEP*LVRQVS
Trigger: CGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTT...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp TGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCCGGTGGGATGGGCACTaGTGCTTCAGCCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: CQIWAASPARHPPSPRRVRWDGH*CFSRRM
Trigger: CATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCG...GACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp AATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACGGTGTCTGGGCTCGGTaGGATGGGCACTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: NLGGLARTAPSESPPRLHGVWAR*DGHWCF
Trigger: GAAGCACCAGTGCCCATCCCACCGAGCCCAGACACC...GTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGTGTCTGGGCTCGGTaGGATGGGCACTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGVWAR*DGHWCF
Trigger: GAAGCACCAGTGCCCATCCCACCGAGCCCAGACACC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTACTGGCCTCCTCTTCTaGGACCTGTCCGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: AKFGRPRPHGTLRVPAASTGLLF*DLSGHR
Trigger: ACGGTGCCCGGACAGGTCCCAGAAGAGGAGGCCAGT...AGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCCCTCCGCCCTGGATTTaGTGCTCAGCTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSPPPWI*CSAAPP
Trigger: AGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGG...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGGCGGATCTTGCTGCTaGCGGAGCAGGCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTGGSCC*RSRPCG
Trigger: CCCGCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCC...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000585465.2
CDS-3UTR CCA 90 bp ACTCCGCGAACACACTGGCTGCCGAGCCATCCCCGAGGCCCCTCCCGGGCGAAGGTCGGCACAGAAGCATaGCGGCCACCTCTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: TPRTHWLPSHPRGPSRAKVGTEA*RPPLRE
Trigger: CTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGAC...CTTCGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GAGGCCTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCGCGCTCCGGAGGTCCTaGGGCGTGGTCGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: EASAMPSGLAALPPAGYSALRRS*GVVGTE
Trigger: TTCTGTGCCGACCACGCCCCAGGACCTCCGGAGCGC...GGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGCGGGGTCAGGAGCCTaGTCTCCACACCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTAGSGA*SPHPPA
Trigger: AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGC...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGTGGCGCTGCATGCATaGCGGGGTCAGGAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSVALHA*RGQEPG
Trigger: ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCAC...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGAGAGCGCAGTGGCCTTaGGGGAGAGGTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLRAQWP*GRGEGP
Trigger: AGGACCCTCACCTCTCCCCCAAGGCCACTGCGCTCT...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTGTCCCAAGAGCGCAGTaGCCTTGGGGGAGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGVPRAQ*PWGRGE
Trigger: CTCACCTCTCCCCCAAGGCCACTGCGCTCTTGGGAC...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCGGCGGATCTTGCTGCTaGCAGCAGGCCTTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSGGSCC*QQALRA
Trigger: TGCCCGCAAGGCCTGCTGCCAGCAGCAAGATCCGCC...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS-3UTR CCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTTGCCATGGCCGCAGGTaGGACCCCACCCAGGTACTG +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVCHGRR*DPTQVL
Trigger: CAGTACCTGGGTGGGGTCCCACCTGCGGCCATGGCA...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTGGGAGACGGCAAGTGTaGCCTGAGCTGAGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVGRRQV*PELRGA
Trigger: TGCGCCCCTCAGCTCAGGCCACACTTGCCGTCTCCC...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp CGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTAGTCGATGCGGTGGATaGACGTGTCCATACCCACCG +
Preference number: 4 (lower is better)
Translates to: RPSPGPNTAKPGAWRGGASRCGG*TCPYPP
Trigger: CGGTGGGTATGGACACGTTCATCCACCGCATCGACT...AGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTAGGCCGTCAATCAGCTaGCAGAAGTACCCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGRPSIS*QKYPWA
Trigger: GGCCCACGGGTACTTCTGTCAGCTGATTGACGGCCT...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGTGCCACCGGTGGTaGGCAGCAGGTTCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMAGCHRW*AAGSPA
Trigger: AGCCGGGGAACCTGCTGCTCACCACCGGTGGCACCC...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp CATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCCCTACGCTAAGGCCCTaGGCTCCTCCTCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: HGGHLSGRAGGTGRKTEGPTLRP*APPQAL
Trigger: TAGTGCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGG...GCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGGCTTAGCAGGGTCATaGAAAAGGTGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLGLAGS*KRWPSP
Trigger: GGGGCTGGGCCACCTTTTTCATGACCCTGCTAAGCC...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GCTGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAATCACCAGCACCCTGGTaGAACCCACAGGCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAQAMPAPGSGPGVSSLKSPAPW*NPQAWG
Trigger: GCCCCAGGCCTGTGGGTTTCACCAGGGTGCTGGTGA...TTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp TTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACCAGCACCTCCTTCACCTTaGCGTAAGAGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: FGRPRPHGTLRVPAASAPAPPSP*RKSLPP
Trigger: TGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGC...TGGTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGTTCCGGAACCAGCTGTaGTGCCGGATCTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: DTAQPWAEHSQAGSMAGRFRNQL*CRICRM
Trigger: CATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAA...CCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp TGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCGCACCACAGTCATGCTaGGCCACCGGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CQIWAASPARHPPSPRRVAPQSC*ATGPWC
Trigger: ACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGC...GACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTACGGCACCACAGTCATaGTGCGCCACCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSTAPQS*CATGPW
Trigger: CCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGT...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTTCCTCGTCCGCGCCGTaGAGGTCCTCCAAGTACGGC +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTSSSAP*RSSKYG
Trigger: GCCGTACTTGGAGGACCTGCACGGCGCGGACGAGGA...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLDLVLS*AASVPF
Trigger: GAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATC...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GAGGCCTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCAGCCTCACTGCTGCTTaGAGGCCGACAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: EASAMPSGLAALPPAGYSSLTAA*RPTAGG
Trigger: TCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT...GGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGGCGGCCAGCCTCACTaGTGCTTGCAGGCCGACAGC +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLGGQPH*CLQADS
Trigger: GCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCCGCC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAAGTCAACAAGCCGCGTaGACTGCCGGGCGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GLGRSVPSTTSVAPAMAASQQAA*TAGRPR
Trigger: CCTCGGCCGCCCGGCAGTGCACGCGGCTTGTTGACT...TGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGGTGGCGCTGCATaGATGGCGGGGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPPGGAA*MAGSGA
Trigger: GGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGG...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGACTCCGCTCTAAGCCCTaGCTCAGACGCCTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGLRSKP*LRRLLA
Trigger: GGCGAGGAGGCGTCTGAGGCAGGGCTTAGAGCGGAG...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR GCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCGAGCCCTCGCTCTTCTaGAAGCCGCGCTCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSEPSLF*KPRSAL
Trigger: TAGAGCGGAGCGCGGCTTGCAGAAGAGCGAGGGCTC...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCGGCCTGGGGTCAAATTaGAGCCAGGCCCCAAGGATG +
Preference number: 4 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCGLGSN*SQAPRM
Trigger: CATCCTTGGGGCCTGGCTGCAATTTGACCCCAGGCC...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp TCCCCTGGGGCACCCTGGCCCATGGTTGGTTCTAGAGGCCCAGGAGCCGCCACATGCCTGGGCTGGCCCTaGCCTAACTGGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SPGAPWPMVGSRGPGAATCLGWP*PNWPSC
Trigger: GCAGGAGGGCCAGTTAGGGCAGGGCCAGCCCAGGCA...TGTGGCGGCTCCTGGGCCTCTAGAACCAACCATGGGCCAGGGTGCCCCAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp AGCCTCACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCGGAGCCGCGAACACACTGGCTaGCGAGCCATCCCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: SLTAACRPTAGGSCCWRSREHTG*RAIPEA
Trigger: GGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCG...GCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAACCCACGTACTGTCCCTaGGAGGAGCCGTGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GTEAWRPPLREGGRNRQEPTYCP*EEPWWL
Trigger: CAACCACCACGGCTCCTCGCAGGGACAGTACGTGGG...TTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGAAAGTGCAGGAAGCTaGCCACGTACTGTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRESAGS*PRTVPA
Trigger: CGCAGGGACAGTACGTGGGCAGCTTCCTGCACTTTC...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTTGGGGCTGCCCACCCTaGCCAGGTGGACACTGTTCT +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVWGCPP*PGGHCS
Trigger: AGAACAGTGTCCACCTGGGCAGGGTGGGCAGCCCCA...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGTCCAGCCTGAAATGCTaGCCCCCAGCAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGSSLKC*PPAALG
Trigger: TCCCAGAGCTGCTGGGGGGCAGCATTTCAGGCTGGA...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCCCGGGCCTCAGAACTaGGAGACGGCCCGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASPGPQN*ETARSG
Trigger: CCCTGACCGGGCCGTCTCCCAGTTCTGAGGCCCGGG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCCGTTGGCCTCCCCGTTaGGGATCCTTCGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRRWPPR*GSFATS
Trigger: AGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACG...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTCGTTGGCCTCCCCGTTaGGGATCCTTCGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: RPSPGPNTAKPGAWRGGARWPPR*GSFATS
Trigger: AGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACG...AGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTAAGTACCCGTGGGCCTaGCACACTGGGAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: RPSPGPNTAKPGAWRGGAKYPWA*HTGKRF
Trigger: GAAGCGTTTCCCAGTGTGCCAGGCCCACGGGTACTT...AGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCGCAATCTCGGGCGGCTaGAAAGCCGGGGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGAISGG*KAGEPW
Trigger: CCAGGGCTCCCCGGCTTTCCAGCCGCCCGAGATTGC...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGTGCGCCACCGGTCCTTaGTGTCTGGGCTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: APSESPPRLHHPAMAFLVCATGP*CLGSVG
Trigger: TCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCA...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCCGGCCCTCCGCCCTaGATTTGGTGCTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPPGPPP*IWCSAA
Trigger: CGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGG...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000585465.2
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGCGGGGTCAGGAGCCTaGTCTCCACACCCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLAGSGA*SPHPPA
Trigger: AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCCGGCCTCCGCCCTaGATTTGGTGCTCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPARPPP*IWCSAA
Trigger: CGCAGCTGAGCACCAAATCCAGGGCGGAGGCCGGGC...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS-3UTR CCA 90 bp GAGGCCTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCGGCTGGCTGCCAATGTaGGCCGCCCCTACGCTAAGG +
Preference number: 4 (lower is better)
Translates to: EASAMPSGLAALPPAGYSGWLPM*AAPTLR
Trigger: CCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCC...GGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCGACACGGCCCAGCCCTaGGCCGAACACAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGDTAQP*AEHSQA
Trigger: GGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR CCA 90 bp CAGGCACGCGAAATGCCAGCACAGAACCACGCGGGGAGCAGAGCTCAGCCTGCCCTGCAGGGGCGGCCGTaGGGGTCAGCGTGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QAREMPAQNHAGSRAQPALQGRP*GSACGP
Trigger: TGGACCACACGCTGACCCCCACGGCCGCCCCTGCAG...GGCAGGCTGAGCTCTGCTCCCCGCGTGGTTCTGTGCTGGCATTTCGCGTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTGGCTCAGGGATCCTaGCCTGCAGGGGCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASLAQGS*PAGAAV
Trigger: CACGGCCGCCCCTGCAGGCCAGGATCCCTGAGCCAG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp AGCCTCACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCGGAGCCTCAGCCATGCCGAGTaGTCTGGCGGCCCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: SLTAACRPTAGGSCCWRSLSHAE*SGGPSP
Trigger: GGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAG...GCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCTGGGATCTGGGTGTTaGCAGCAGGACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNLGSGC*QQDPHP
Trigger: AGGATGCGGGTCCTGCTGCCAACACCCAGATCCCAG...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCCACTCCTGTCTGCACTaGTGCCCAGGATCTAGCCCA +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRHSCLH*CPGSSP
Trigger: TGGGCTAGATCCTGGGCACCAGTGCAGACAGGAGTG...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp ACTCCGCGAACACACTGGCTGCCGAGCCATCCCCGAGGCCCCTCCCGGGCGAAGGTGGGGCAGACCCTGTaGACAAGGTGCCCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TPRTHWLPSHPRGPSRAKVGQTL*TRCPSS
Trigger: AGAGCTGGGGCACCTTGTCCACAGGGTCTGCCCCAC...CTTCGCCCGGGAGGGGCCTCGGGGATGGCTCGGCAGCCAGTGTGTTCGCGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCCAGGCCCAGCCCGTCTCTaGTGGGGCAGACCCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SPPPRLLHLPWPQVGPHPGPARL*WGRPCG
Trigger: TCCACAGGGTCTGCCCCACCAGAGACGGGCTGGGCC...TGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGGGCACCCTGGCCCATaGTTGGTTCTAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSGHPGP*LVLEAQ
Trigger: CTGGGCCTCTAGAACCAACCATGGGCCAGGGTGCCC...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CAA 72 bp GCTGGCCCTGCCCTAACTGGCCCTCCTGCCTGGGATTaGCCTGGCTGCCCGTCTCAGGGCACCAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGPALTGPPAWD*PGCPSQGTRAL
Trigger: CAGAGCCCTGGTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGTCAGCTCGCCCTCCGTaGACATGCCCAGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLSARPP*TCPAAA
Trigger: CGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGA...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACAGTCGATGCGGTGGATaGACGTGTCCATACCCACCG +
Preference number: 4 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNSRCGG*TCPYPP
Trigger: CGGTGGGTATGGACACGTTCATCCACCGCATCGACT...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCGCGGCTGGTAGATaGCCTCGGTGGAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSGAAGR*PRWSRC
Trigger: GCATCGACTCCACCGAGGTCATCTACCAGCCGCGCC...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp AAGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACATCAGGTACTTGCCGATaGGCTTGGCCCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: KQGDPRAQRRPRREPDPTSGTCR*AWPACG
Trigger: GCCGCAAGCGGGCCAAGCTCATCGGCAAGTACCTGA...TGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCGCAGGTTCCCCGGCTTaGTGTCCTTGTGCACAATGC +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGAGSPA*CPCAQC
Trigger: GCATTGTGCACAAGGACATCAAGCCGGGGAACCTGC...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCACGTCAGTCCCGGCTaGGAGTCCAAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPHVSPG*ESKPGA
Trigger: TGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTG...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCACACGTCAGTCCCGGCTaGGAGTCCAAGCCCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSHVSPG*ESKPGA
Trigger: TGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTG...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCCACCACCTCCATaGTGGACCCAGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GGAACMAGSGAWSPHPPAGPPPP*WTQGPG
Trigger: TCCAGGACCCTGGGTCCAGCATGGAGGTGGTGGACC...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCGCACCTCCTTCACCTTaGCGTAAGAGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGAPPSP*RKSLPP
Trigger: TGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGC...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGCACCTCCTTCACCTTaGCGTAAGAGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: DTAQPWAEHSQAGSMAGRAPPSP*RKSLPP
Trigger: TGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGC...CCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTCGGAACCAGCTGTGCTaGCGGATCTGCCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTRNQLC*RICRME
Trigger: CTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCG...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGAGCCTCACTGCTGCTTaGAGGCCGACAGCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLSLTAA*RPTAGG
Trigger: TCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGGCTCCGCCCGGGGCTaGGAAGTCAACAAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLGSARG*EVNKPR
Trigger: ACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCAGTCTCCACATAAAGTaGATGGAGGCCGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRSLHIK*MEAASL
Trigger: GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACT...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCCAGGTGGCGCTGCATaGATGGCGGGGTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASPGGAA*MAGSGA
Trigger: GGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGACGCGATGGTCGTGGTaGTGCAAATCCAAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: GPALGRTQPSREHGGEGLTRWSW*CKSKSP
Trigger: TGGGCTCTTGGATTTGCAGCACCACGACCATCGCGT...CAGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGACTCTCGCAACCTaGCTGGGCTGGCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMAGTLAT*LGWPCP
Trigger: AGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAGTCCC...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCAAGGTGCCCCAGCTCTaGATCAGCGGGCACAGCCGC +
Preference number: 4 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPKVPQL*ISGHSR
Trigger: GCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTT...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGACACGTCTGTTGCACCTaGCATGGCCGCAGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGHVCCT*HGRRWD
Trigger: GTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTG...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCAGAGCCCAACTTCGCTaGGGGCGTCTCCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLRAQLR*GRLRRR
Trigger: GCGTCGCCGGAGACGCCCCCAGCGAAGTTGGGCTCT...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGAGAGCCCAACTTCGCTaGGGGCGTCTCCGGCGACGC +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMARAQLR*GRLRRR
Trigger: GCGTCGCCGGAGACGCCCCCAGCGAAGTTGGGCTCT...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCCGGGACCCCCACACCTaGAGAGCCCAACTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPRDPHT*RAQLRW
Trigger: CCAGCGAAGTTGGGCTCTCCAGGTGTGGGGGTCCCG...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp ATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGACCACCACCTCCATGCTaGACCCAGGGTCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: MTRPSPGPNTAKPGAWRGPPPPC*TQGPGV
Trigger: GACTCCAGGACCCTGGGTCCAGCATGGAGGTGGTGG...TCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp ACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCGTGGAGTCGATGCGGTaGATGAACGTGTCCATACCC +
Preference number: 4 (lower is better)
Translates to: TAQPWAEHSQAGSMAGRGVESMR*MNVSIP
Trigger: GGGTATGGACACGTTCATCCACCGCATCGACTCCAC...GCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGGTGGGCCTGGCACACTaGGAAACGCTTCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: APSESPPRLHHPAMAFLVVGLAH*ETLLRH
Trigger: GTGCCGGAGAAGCGTTTCCCAGTGTGCCAGGCCCAC...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCAAGTACCCGTGGGCCTaGCACACTGGGAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGKYPWA*HTGKRF
Trigger: GAAGCGTTTCCCAGTGTGCCAGGCCCACGGGTACTT...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGCCGGATCTGCCGGATaGAGAACCTCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSAGSAG*RTSWPV
Trigger: AACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGC...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTCGGTGGGATGGGCACTaGTGCTTCAGCCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTRWDGH*CFSRRM
Trigger: CATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCG...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGTGCGCCACCGGTCCTTaGTGTCTGGGCTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLCATGP*CLGSVG
Trigger: TCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCA...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCTCCTCCCTCCGCCCTGGATTTaGTGCTCAGCTGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LSHAEWSGGPSPCWVLLLPPPWI*CSAAPP
Trigger: AGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGG...GAGGAGGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLGGPGA*SAQKHG
Trigger: GCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp GACAAGGTGCCCCAGCTCTGCATCAGCGGGCACAGCCGCCACTGGGCCCTTGCCCTCTCGCAACCTGCCTaGGCTGGCCCTGCCCTAACT +
Preference number: 4 (lower is better)
Translates to: DKVPQLCISGHSRHWALALSQPA*AGPALT
Trigger: AGTTAGGGCAGGGCCAGCCCAGGCAGGTTGCGAGAG...GGCAAGGGCCCAGTGGCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCTGCGAGGAGCCGTGGTaGTTGGCGAGGACTCCGCGA +
Preference number: 4 (lower is better)
Translates to: CPLHHVCCTCHGRRWDPTCEEPW*LARTPR
Trigger: TCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCA...GGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCCACTCCCGCAGATGGCCTaGGCAGGAGTGTCCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPPPRLLHLPWPQVGPHPLPQMA*AGVSPP
Trigger: TGGAGGGGACACTCCTGCCCAGGCCATCTGCGGGAG...TGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
3UTR CAA 72 bp CTGCCCACGTACTGTCCCTGCGAGGAGCCGTGGTGGTaGGCGAGGACTCCGCGAACACACTGGCTGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LPTYCPCEEPWW*ARTPRTHWLPS
Trigger: GCTCGGCAGCCAGTGTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTCGCAGGGACAGTACGTGGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCCACGGACAAGTATaGACACGGCCGAGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPAHGQV*TRPSAV
Trigger: GACTGCGCTCGGCCGTGTTCATACTTGTCCGTGGGC...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCGCCCACGGACAAGTATaGACACGGCCGAGCGCAGTC +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGAHGQV*TRPSAV
Trigger: GACTGCGCTCGGCCGTGTTCATACTTGTCCGTGGGC...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp GGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAAGTCGATGCGGTGGATaGACGTGTCCATACCCACCG +
Preference number: 4 (lower is better)
Translates to: GTEAWRPPLREGGRNRQESRCGG*TCPYPP
Trigger: CGGTGGGTATGGACACGTTCATCCACCGCATCGACT...TTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp GGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGCAGGTTCCCCGGCTTaGTGTCCTTGTGCACAATGC +
Preference number: 4 (lower is better)
Translates to: GTEAWRPPLREGGRNRQEAGSPA*CPCAQC
Trigger: GCATTGTGCACAAGGACATCAAGCCGGGGAACCTGC...TTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCGGCGCTGTCCATTGTaGCTGGCCTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLRRCPL*LASSSG
Trigger: CCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR TCA 90 bp GGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAAGGGCACCAGGGCTCTaGAAGGCAGAAGACCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLGRSVPSTTSVAPAMAARAPGL*KAEDPG
Trigger: CCCAGGGTCTTCTGCCTTTCAGAGCCCTGGTGCCCT...TGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTGAGTACCCAGTACTaGGTACTGAGGCCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGLSTQY*VLRPQP
Trigger: TGGCTGAGGCCTCAGTACTCAGTACTGGGTACTCAG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGTGAACATGCCCAGCTaGTGCGGGTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLVNMPS*CGSTTS
Trigger: GGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCAC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp AGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCTGTGCTGCCGGATCTaGCGGATGGAGAACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SRVTRERKGGRDVSPTPQLCCRI*RMENLL
Trigger: CAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAG...CTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTTTCCGGAACCAGCTGTaGTGCCGGATCTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTFRNQL*CRICRM
Trigger: CATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAA...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTTGGGATGGGCACTGGTaGTTCAGCCGGAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGWDGHW*FSRRMF
Trigger: AAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCA...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp AAGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACACCGCACACTCCTGCTTaGTCCGGGTTTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KQGDPRAQRRPRREPDPTPHTPA*SGFSLG
Trigger: CCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGCGG...TGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CAGGCACGCGAAATGCCAGCACAGAACCACGCGGGGAGCAGAGCTCAGCCTGCCAACGCAAGGGGGCTCTaGAGGTCAGGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QAREMPAQNHAGSRAQPANARGL*RSGTGL
Trigger: GAGCCCCGTCCCTGACCTGCAGAGCCCCCTTGCGTT...GGCAGGCTGAGCTCTGCTCCCCGCGTGGTTCTGTGCTGGCATTTCGCGTGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCCGGGACCCCCACACCTaGAGAGCCCAACTTCGCTGG +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLRDPHT*RAQLRW
Trigger: CCAGCGAAGTTGGGCTCTCCAGGTGTGGGGGTCCCG...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCGTGGGCCTGGCACACTaGGAAACGCTTCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGVGLAH*ETLLRH
Trigger: GTGCCGGAGAAGCGTTTCCCAGTGTGCCAGGCCCAC...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCAAGTACCCGTGGGCCTaGCACACTGGGAAACGCTTC +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSKYPWA*HTGKRF
Trigger: GAAGCGTTTCCCAGTGTGCCAGGCCCACGGGTACTT...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCCGGTCCTTGGTGTCTaGGCTCGGTGGGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASPVLGV*ARWDGH
Trigger: GTGCCCATCCCACCGAGCCCAGACACCAAGGACCGG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGTGCGCCACCGGTCCTTaGTGTCTGGGCTCGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRCATGP*CLGSVG
Trigger: TCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCA...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGACTGGCCTCCTCTTCTaGGACCTGTCCGGGCACCGT +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLTGLLF*DLSGHR
Trigger: ACGGTGCCCGGACAGGTCCCAGAAGAGGAGGCCAGT...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTGCTGTCCATTGTGACTaGCCTCCTCTTCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGAVHCD*PPLLGP
Trigger: AGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGC...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCGCTGTCCATTGTGACTaGCCTCCTCTTCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGAVHCD*PPLLGP
Trigger: AGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGC...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CCA 90 bp AAGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCTCCGGGTTTTCTCTaGGGTCCCAAGAGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: KQGDPRAQRRPRREPDPTAPGFL*GPKSAV
Trigger: CACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGC...TGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCCATGCTGCATCCTCCTaGGGGGCCCCCAGACACTGT +
Preference number: 4 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPHAASS*GAPRHC
Trigger: ACAGTGTCTGGGGGCCCCCCAGGAGGATGCAGCATG...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTAGAAGACCCTGGGCCTaGGGTCAAATTGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVRRPWA*GQIAAR
Trigger: CCTGGCTGCAATTTGACCCCAGGCCCAGGGTCTTCT...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GACAAGGTGCCCCAGCTCTGCATCAGCGGGCACAGCCGCCACTGGGCCCTTGCCTGGCCCTGCCCTAACTaGCCCTCCTGCCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: DKVPQLCISGHSRHWALAWPCPN*PSCLGF
Trigger: AAATCCCAGGCAGGAGGGCCAGTTAGGGCAGGGCCA...GGCAAGGGCCCAGTGGCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGGCCCTTCCCCCTGCTaGGTACTCCTCCTCACCACC +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLGPSPC*VLLLTT
Trigger: GGTGGTGAGGAGGAGTACCCAGCAGGGGGAAGGGCC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TCCCCTGGGGCACCCTGGCCCATGGTTGGTTCTAGAGGCCCAGGAGCCGCCACACCAGCATCTGAGCAGTaGGAGGGGCGTCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: SPGAPWPMVGSRGPGAATPASEQ*EGRPPE
Trigger: CTCAGGTGGACGCCCCTCCCACTGCTCAGATGCTGG...TGTGGCGGCTCCTGGGCCTCTAGAACCAACCATGGGCCAGGGTGCCCCAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCACCCTTCCCTGGGATCTaGGTGTTGGCAGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSPFPGI*VLAAGP
Trigger: GGGTCCTGCTGCCAACACCCAGATCCCAGGGAAGGG...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCCAGCCCGTCTCTGGTaGGGCAGACCCTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLPARLW*GRPCGQ
Trigger: TTGTCCACAGGGTCTGCCCCACCAGAGACGGGCTGG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCTTCTGGGACCTGTCCTaGGAGGGAGACGGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSFWDLS*EGDGKC
Trigger: ACACTTGCCGTCTCCCTCCCAGGACAGGTCCCAGAA...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp ATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCTCAGCTCGCCCTCCGTaGACATGCCCAGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: IYCQIWAASPARHPPSPRSARPP*TCPAAA
Trigger: CGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGA...GCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCTCAGGTACTTGCCGATaGGCTTGGCCCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASSGTCR*AWPACG
Trigger: GCCGCAAGCGGGCCAAGCTCATCGGCAAGTACCTGA...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTACCAGATGTCCACCTTaGAGCCGGAGAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSTRCPP*SRRRCP
Trigger: TGGACACCTTCTCCGGCTTCAAGGTGGACATCTGGT...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp ACACGTGAGGCCAAAGTGGAGGCACGCAGAGGCCGATGCAGCAGCCCCGGCAGACGGCGCTGTCCATTGTaGCTGGCCTCCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TREAKVEARRGRCSSPGRRRCPL*LASSSG
Trigger: CCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCG...TCTGCCGGGGCTGCTGCATCGGCCTCTGCGTGCCTCCACTTTGGCCTCACGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAACCGGCAGGAAGACTaGGGGCCTGGCGCGGGCACC +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGNRQED*GPGAGT
Trigger: GGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTT...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCCCAGTACTGAGTACTaGGGCCTCAGCCATGCCGAG +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLPSTEY*GLSHAE
Trigger: CTCGGCATGGCTGAGGCCTCAGTACTCAGTACTGGG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp AGCGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGCCAGCATTTCCTGCATaGCACACACGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: SGRAASRWRCMHGGVRSLPAFPA*HTRSTP
Trigger: TGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGG...CAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCTGTCCAGCATTTCCTaGATGCCACACACGCAGTAC +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGLSSIS*MPHTQY
Trigger: GTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAG...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp ACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGTCCTTGTGCACAATaGCCTGGCTATGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: TAQPWAEHSQAGSMAGRGCPCAQ*PGYAGT
Trigger: AGTACCTGCATAGCCAGGGCATTGTGCACAAGGACA...GCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp CATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCGGCTTGATGTCCTTGTaGACAATGCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: HGGHLSGRAGGTGRKTEGGLMSL*TMPWLC
Trigger: GCATAGCCAGGGCATTGTGCACAAGGACATCAAGCC...GCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGGGCTTGATGTCCTTGTaGACAATGCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGGLMSL*TMPWLC
Trigger: GCATAGCCAGGGCATTGTGCACAAGGACATCAAGCC...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTTGATGTCCTTGTaGACAATGCCCTGGCTATGC +
Preference number: 4 (lower is better)
Translates to: DTAQPWAEHSQAGSMAGRGLMSL*TMPWLC
Trigger: GCATAGCCAGGGCATTGTGCACAAGGACATCAAGCC...CCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTCTGTGCTGCCGGATCTaGCGGATGGAGAACCTCTTG +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTLCCRI*RMENLL
Trigger: CAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAG...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGAGCTCATGTGCCCAGTaGAGAGCCCCAGCTCCGAGA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLSSCAQ*RAPAPR
Trigger: TCTCGGAGCTGGGGCTCTGCACTGGGCACATGAGCT...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GGCCCGGCCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTGCCGTTAATGGCAGGGGAAAGTaGAGGAAGCTGCCCACGTAC +
Preference number: 4 (lower is better)
Translates to: GPALRPGFGAQLRRLCAVNGRGK*RKLPTY
Trigger: GTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATT...AACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGGCCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGCTCCACCACGTCTGTTaGACCTGCCATGGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMALHHVC*TCHGRR
Trigger: CCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAG...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGAGACGCGAGTTCCAGTaGGACCCGGGCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPRREFQ*DPGLRT
Trigger: AGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCT...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTCGTTGGCCTCCCCGTTaGGGATCCTTCGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTRWPPR*GSFATS
Trigger: AGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACG...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp ATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCACAGTCGCCCGGGATaGCGTAGCTCCCCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: IYCQIWAASPARHPPSPRHSRPG*RSSPSR
Trigger: TCGGGAAGGGGAGCTACGCCATCCCGGGCGACTGTG...GCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNGWRTS*PVRTQA
Trigger: TGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCC...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGCCGGATCTGCCGGATaGAGAACCTCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSAGSAG*RTSWPV
Trigger: AACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGC...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGCGGTGGGATGGGCACTaGTGCTTCAGCCGGAGGATG +
Preference number: 4 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRRWDGH*CFSRRM
Trigger: CATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCG...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGATGGCGGGGAGGGGCTaGCTGCCAATGTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGMAGRG*LPMWAA
Trigger: GGCGGCCCACATTGGCAGCCAGCCCCTCCCCGCCAT...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR CCA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGTGGACCCTGTGCACTaGGTCCTCACATCCCAACCT +
Preference number: 4 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTVDPVH*VLTSQP
Trigger: AGGTTGGGATGTGAGGACCCAGTGCACAGGGTCCAC...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGTGCCTGGGATTTGCCTaGCTGCCCGTCTCAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMACLGFA*LPVSGH
Trigger: GTGCCCTGAGACGGGCAGCCAGGCAAATCCCAGGCA...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCCACACGTGAGGCCAAAGTaGAGGCACGCAGAGGCCGAT +
Preference number: 4 (lower is better)
Translates to: SPPPRLLHLPWPQVGPHPHVRPK*RHAEAD
Trigger: ATCGGCCTCTGCGTGCCTCCACTTTGGCCTCACGTG...TGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CCCCACCTCCCAGCACACCCTAGTGACCAGGGTACCCAGCAGCACCTCCCGTTCCCCAAGCCCCTTCCCTaGGATCTGGGTGTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PHLPAHPSDQGTQQHLPFPKPLP*DLGVGS
Trigger: GCTGCCAACACCCAGATCCCAGGGAAGGGGCTTGGG...GAACGGGAGGTGCTGCTGGGTACCCTGGTCACTAGGGTGTGCTGGGAGGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGAGGAGCCGTGGTGGTTaGCGAGGACTCCGCGAACAC +
Preference number: 4 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRRSRGG*RGLREH
Trigger: GTGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCT...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGACCTCCCGTGCTCCCCTaGGGCACCCTGGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGPPVLP*GTLAHG
Trigger: ACCATGGGCCAGGGTGCCCCAGGGGAGCACGGGAGG...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp AGCCTCACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCGGAGCACTGGCCTCCTCTTCTaGGACCTGTCCTGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SLTAACRPTAGGSCCWRSTGLLF*DLSWEG
Trigger: TCCCTCCCAGGACAGGTCCCAGAAGAGGAGGCCAGT...GCTCCGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACTCAGGTACTTGCCGATaGGCTTGGCCCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: LARMVWISCSRESPRPADSGTCR*AWPACG
Trigger: GCCGCAAGCGGGCCAAGCTCATCGGCAAGTACCTGA...GTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR TCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGAGGCCGTCAATCAGCTaGCAGAAGTACCCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMARPSIS*QKYPWA
Trigger: GGCCCACGGGTACTTCTGTCAGCTGATTGACGGCCT...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCGCAGGTTCCCCGGCTTaGTGTCCTTGTGCACAATGC +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGAGSPA*CPCAQC
Trigger: GCATTGTGCACAAGGACATCAAGCCGGGGAACCTGC...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGCCCACCACTTCCCGCTaGAACAGTAAAGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPAPTTSR*NSKAES
Trigger: GCTTTCTGCTTTACTGTTTCAGCGGGAAGTGGTGGG...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCGTCCACCTaGGTACCCAGTACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRGGAST*VPSTEY
Trigger: GTACTCAGTACTGGGTACTCAGGTGGACGCCCCTCC...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGACCCCACCCAGGTACTaGCTGCAGGAACCTCACGAG +
Preference number: 4 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRTPPRY*LQEPHE
Trigger: CTCGTGAGGTTCCTGCAGTCAGTACCTGGGTGGGGT...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGCGAGTCCAAGCCCGGTaGAGGGTCTGCGGACCGGCG +
Preference number: 4 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPRVQAR*RVCGPA
Trigger: CGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCG...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTACAATGCCCTGGCTATaGAGGTACTCCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GGAACMAGSGAWSPHPPATMPWL*RYSRPS
Trigger: TGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGT...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGTGTCCTTGTGCACAATaGCCTGGCTATGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRCPCAQ*PGYAGT
Trigger: AGTACCTGCATAGCCAGGGCATTGTGCACAAGGACA...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCACTGTGCTGCCGGATCTaGCGGATGGAGAACCTCTTG +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSLCCRI*RMENLL
Trigger: CAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAG...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCTTCCGGAACCAGCTGTaGTGCCGGATCTGCCGGATG +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLFRNQL*CRICRM
Trigger: CATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAA...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGCACCACAGTCATGCTaGGCCACCGGTCCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLAPQSC*ATGPWC
Trigger: ACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp ACCTCACGAGTAGGAGGCAAGCTGACAAGGCAGGACCCTCCCGTGCTCCCCTGGGCTGCGCCGCCTCTGTaGCGTTCATACACACGGCCT +
Preference number: 4 (lower is better)
Translates to: TSRVGGKLTRQDPPVLPWAAPPL*RSYTRP
Trigger: AGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGC...CCAGGGGAGCACGGGAGGGTCCTGCCTTGTCAGCTTGCCTCCTACTCGTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLDLVLS*AASVPF
Trigger: GAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR GCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCCGGCGGATCTTGCTaGTGGCGGAGCAGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGAGGSC*WRSRPC
Trigger: GCAAGGCCTGCTCCGCCAGCAGCAAGATCCGCCGGC...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGAGTCTCCACATAAAGTaGATGGAGGCCGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: APSESPPRLHHPAMAFLVSLHIK*MEAASL
Trigger: GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACT...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GACAAGGTGCCCCAGCTCTGCATCAGCGGGCACAGCCGCCACTGGGCCCTTGCCAGTCTCCACATAAAGTaGATGGAGGCCGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: DKVPQLCISGHSRHWALASLHIK*MEAASL
Trigger: GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACT...GGCAAGGGCCCAGTGGCGGCTGTGCCCGCTGATGCAGAGCTGGGGCACCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCCCCACACTCCTGTCTaGACTGGTGCCCAGGATCTA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLPHTPV*TGAQDL
Trigger: TAGATCCTGGGCACCAGTGCAGACAGGAGTGTGGGG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCAGACGCGAGTTCCAGTaGGACCCGGGCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: EATGGASSLHIKCMEAASRREFQ*DPGLRT
Trigger: AGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCT...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGAGACGCGAGTTCCAGTaGGACCCGGGCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMARREFQ*DPGLRT
Trigger: AGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCT...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CTCGGGCCCGGGGGTGGACCCTGTGCACTGGGTCCTCACATCCCAACCTGCCTGGCTGTCCATTGTGACTaGCCTCCTCTTCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: LGPGGGPCALGPHIPTCLAVHCD*PPLLGP
Trigger: AGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGC...CAGGCAGGTTGGGATGTGAGGACCCAGTGCACAGGGTCCACCCCCGGGCCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCACACTCCTGCTTGCTCCGGGTTTTCTCTGGGGTCCCAAGAGCGCAGTGGCCTGGAGGTCCTGGGGCGTaGTCGGCACAGAAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AHSCLLRVFSGVPRAQWPGGPGA*SAQKHG
Trigger: GCCATGCTTCTGTGCCGACCACGCCCCAGGACCTCC...AGGCCACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGACACGGCCCAGCCCTaGGCCGAACACAGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGDTAQP*AEHSQA
Trigger: GGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR CCA 90 bp CAGCTGCGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGAAAGGCAGAAGACCCTaGGCCTGGGGTCAAATTGCA +
Preference number: 4 (lower is better)
Translates to: QLRRLCAVHTHGLGEAPAKGRRP*AWGQIA
Trigger: TGCAATTTGACCCCAGGCCCAGGGTCTTCTGCCTTT...CGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCCACCCTGCCCAGGTaGACACTGTTCTCACAATGG +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPPTLPR*TLFSQW
Trigger: CCATTGTGAGAACAGTGTCCACCTGGGCAGGGTGGG...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp AGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCAGTCCTGAGTGTAGATaGTGTCATCCTCGATGTCGA +
Preference number: 4 (lower is better)
Translates to: RVTRERKGGRDVSPTPQPSPECR*CHPRCR
Trigger: TCGACATCGAGGATGACATCATCTACACTCAGGACT...GGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp CTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCTCCTCGAATGGACCAGTGGCTaGCTCAGCAGCTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LSHAEWSGGPSPCWVLLLEWTSG*LSSFQN
Trigger: GTTCTGGAAGCTGCTGAGTCAGCCACTGGTCCATTC...GAGGAGGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp AAGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACACTGTCCAGCATTTCCTaGATGCCACACACGCAGTAC +
Preference number: 4 (lower is better)
Translates to: KQGDPRAQRRPRREPDPTLSSIS*MPHTQY
Trigger: GTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAG...TGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGACAATGCCCTGGCTATaGAGGTACTCCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPTMPWL*RYSRPS
Trigger: TGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGT...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGTCCTCGTCCGCGCCGTaGAGGTCCTCCAAGTACGGC +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGSSSAP*RSSKYG
Trigger: GCCGTACTTGGAGGACCTGCACGGCGCGGACGAGGA...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp AAGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACATTGACCGCACACTCCTaGTTGCTCCGGGTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KQGDPRAQRRPRREPDPTLTAHS*LLRVFS
Trigger: AGAGAAAACCCGGAGCAAGCAGGAGTGTGCGGTCAA...TGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GCAGCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTGCTGCAAATCCCAGGAGGGAAGCCAGTaGCGGGTCCTGGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AAPPVPTDQTRWSWCCKSQEGSQ*RVLAQG
Trigger: TCCCTGAGCCAGGACCCGGCACTGGCTTCCCTCCTG...GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCTCCTCCACCCAGGTACTGACTaGAGGAACCTCACGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSHAEWSGGPSPCWVLLLHPGTD*RNLTSR
Trigger: CCTACTCGTGAGGTTCCTGCAGTCAGTACCTGGGTG...GAGGAGGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGGTGGAGTCGATGCGGTaGATGAACGTGTCCATACCC +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPVESMR*MNVSIP
Trigger: GGGTATGGACACGTTCATCCACCGCATCGACTCCAC...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp CCGCACACTCCTGCTTGCTCCGGGTTTTCTCTGGGGTCCCAAGAGCGCAGTGGCGCCGGATCTGCCGGATaGAGAACCTCTTGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: PHTPACSGFSLGSQERSGAGSAG*RTSWPV
Trigger: AACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGC...GCCACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp GCAGCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTGCTGCAAATCCTCATACACACGGCCTTaGGGAGGCCCCGGCGCTGTC +
Preference number: 4 (lower is better)
Translates to: AAPPVPTDQTRWSWCCKSSYTRP*GGPGAV
Trigger: GACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGA...GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCACACACTGTACTCTCCTaGGGACCAGCTACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSHTVLS*GPATEL
Trigger: CAGCTCAGTAGCTGGTCCCCAGGAGAGTACAGTGTG...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGCCTGGGCAGGAGTGTCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCACAGACGCGATGGTCGTaGTGCTGCAAATCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLGRSVPSTTSVAPAMAAQTRWS*CCKSKS
Trigger: GCTCTTGGATTTGCAGCACCACGACCATCGCGTCTG...TGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGACACTCCTGCCCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAACAGACCAGACGCGATaGTCGTGGTGCTGCAAATCC +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSTDQTR*SWCCKS
Trigger: GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGT...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGATTAGCCGGGCATGCTaGCGCGCACTTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLISRAC*RALVIP
Trigger: TGGGATTACAAGTGCGCGCCAGCATGCCCGGCTAAT...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCCCGAGAATGGACCAGTaGCTGACTCAGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAANVGRPYAKALSSSSGPRMDQ*LTQQLP
Trigger: TGGAAGCTGCTGAGTCAGCCACTGGTCCATTCTCGG...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGATCAGGTACTTGCCGATaGGCTTGGCCCGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGSGTCR*AWPACG
Trigger: GCCGCAAGCGGGCCAAGCTCATCGGCAAGTACCTGA...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp GGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAAGTCCTGAGTGTAGATaGTGTCATCCTCGATGTCGA +
Preference number: 4 (lower is better)
Translates to: GTEAWRPPLREGGRNRQESPECR*CHPRCR
Trigger: TCGACATCGAGGATGACATCATCTACACTCAGGACT...TTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGCCAGCATTTCCTGCATaGCACACACGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLPAFPA*HTRSTP
Trigger: TGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGG...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCACCAGCATTTCCTGCATaGCACACACGCAGTACTCCA +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSPAFPA*HTRSTP
Trigger: TGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGG...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp TTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGTGGGATGGGCACTGGTaGTTCAGCCGGAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: FMTRPSPGPNTAKPGAWRWDGHW*FSRRMF
Trigger: AAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCA...CCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAACGGCACCACAGTCATaGTGCGCCACCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGTAPQS*CATGPW
Trigger: CCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGT...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GGTGGACACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACGGCTCCGCCCGGGGCTaGGAAGTCAACAAGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GGHCSHNGRGKCRKLPTYGSARG*EVNKPR
Trigger: ACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCC...GTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGGAGCCCTCGCTCTTCTaGAAGCCGCGCTCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGEPSLF*KPRSAL
Trigger: TAGAGCGGAGCGCGGCTTGCAGAAGAGCGAGGGCTC...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR GCA 90 bp GCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTAGCAAGCATCCACCCTaGAGATACACTGCAAAACTC +
Preference number: 4 (lower is better)
Translates to: AARLPGGAACMAGSGAWSSKHPP*RYTAKL
Trigger: GAGTTTTGCAGTGTATCTGCAGGGTGGATGCTTGCT...AGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp ACACGTGAGGCCAAAGTGGAGGCACGCAGAGGCCGATGCAGCAGCCCCGGCAGACGATGGTCGTGGTGCTaGAAATCCAAGAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TREAKVEARRGRCSSPGRRWSWC*KSKSPG
Trigger: TCCTGGGCTCTTGGATTTGCAGCACCACGACCATCG...TCTGCCGGGGCTGCTGCATCGGCCTCTGCGTGCCTCCACTTTGGCCTCACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCGTGGAGTCGATGCGGTaGATGAACGTGTCCATACCC +
Preference number: 4 (lower is better)
Translates to: ATGGASSLHIKCMEAASLVESMR*MNVSIP
Trigger: GGGTATGGACACGTTCATCCACCGCATCGACTCCAC...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp AATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCCGCGTCTGCACAACACATCCACCAGCTaGATGACATTTTTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: NLGGLARTAPSESPPRLHNTSTS*MTFLCR
Trigger: ACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTT...GTGCAGACGCGGCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCAACACATCCACCAGCTaGATGACATTTTTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: REGSARGCEVNKPRALPGNTSTS*MTFLCR
Trigger: ACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTT...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAAGGTGTCCAGGCCGTTaGCAATCTCGGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGRCPGR*QSRAAG
Trigger: TCCAGCCGCCCGAGATTGCCAACGGCCTGGACACCT...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp CTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LPGGAACMAGSGAWSPHPGWRTS*PVRTQA
Trigger: TGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCC...CGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGGTGTCTGGGCTCGGTaGGATGGGCACTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGGVWAR*DGHWCF
Trigger: GAAGCACCAGTGCCCATCCCACCGAGCCCAGACACC...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGCCGGTCCTTGGTGTCTaGGCTCGGTGGGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPPVLGV*ARWDGH
Trigger: GTGCCCATCCCACCGAGCCCAGACACCAAGGACCGG...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp TGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGAGGAGTTCTTCACGTTaGCCTCCCCGTTGGGGATCC +
Preference number: 4 (lower is better)
Translates to: CWPGWSGSLALVSHRARPRSSSR*PPRWGS
Trigger: GGATCCCCAACGGGGAGGCCAACGTGAAGAACTCCT...CGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp GCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACAGGTCCAGAGCCAGGAAGTaGATTCAGAGTGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARMVWISCSRESPRPADRSRARK*IQSGQE
Trigger: CTCCTGGCCACTCTGAATCCACTTCCTGGCTCTGGA...CCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR TCA 90 bp GACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGAACCTCCTCAGTAGTTaGATTTCCTTCTTCACGTTG +
Preference number: 4 (lower is better)
Translates to: DTAQPWAEHSQAGSMAGRNLLSS*ISFFTL
Trigger: CAACGTGAAGAAGGAAATTCAACTACTGAGGAGGTT...CCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp ATTTATTGCCAAATTTGGGCGGCCTCGCCCGCACGGCACCCTCCGAGTCCCCGCACCAGATGTCCACCTTaGAGCCGGAGAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: IYCQIWAASPARHPPSPRTRCPP*SRRRCP
Trigger: TGGACACCTTCTCCGGCTTCAAGGTGGACATCTGGT...GCGGGGACTCGGAGGGTGCCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGTGTCCTTGTGCACAATaGCCTGGCTATGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLCPCAQ*PGYAGT
Trigger: AGTACCTGCATAGCCAGGGCATTGTGCACAAGGACA...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp CCGCACACTCCTGCTTGCTCCGGGTTTTCTCTGGGGTCCCAAGAGCGCAGTGGCTGGGATGGGCACTGGTaGTTCAGCCGGAGGATGTTT +
Preference number: 4 (lower is better)
Translates to: PHTPACSGFSLGSQERSGWDGHW*FSRRMF
Trigger: AAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCA...GCCACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GCAGCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTGCTGCAAATCCGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTC +
Preference number: 4 (lower is better)
Translates to: AAPPVPTDQTRWSWCCKSDLVLS*AASVPF
Trigger: GAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATC...GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp AGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCAAGCTTTATTTATTaGCAAATTTGGGCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: SRVTRERKGGRDVSPTPQPSFIY*QIWAAS
Trigger: CGAGGCCGCCCAAATTTGGCAATAAATAAAGCTTGG...CTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR GCA 90 bp GCAGCACCTCCCGTTCCAACAGACCAGACGCGATGGTCGTGGTGCTGCAAATCCCCTAACTGGCCCTCCTaGCTGGGATTTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AAPPVPTDQTRWSWCCKSPNWPS*LGFAWL
Trigger: CAGCCAGGCAAATCCCAGGCAGGAGGGCCAGTTAGG...GGATTTGCAGCACCACGACCATCGCGTCTGGTCTGTTGGAACGGGAGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGCCAGGCACGCGAAATaGCAGCACAGAACCACGCGG +
Preference number: 4 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPARHAK*QHRTTR
Trigger: CCGCGTGGTTCTGTGCTGGCATTTCGCGTGCCTGGC...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGTGCACCATCCCGCGATaGCGTTTCTCGTGTTTTTCT +
Preference number: 4 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLCTIPR*RFSCFS
Trigger: AGAAAAACACGAGAAACGCCATCGCGGGATGGTGCA...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CCA 90 bp CCGCACACTCCTGCTTGCTCCGGGTTTTCTCTGGGGTCCCAAGAGCGCAGTGGCATTTATTGCCAAATTTaGGCGGCCTCGCCCGCACGG +
Preference number: 4 (lower is better)
Translates to: PHTPACSGFSLGSQERSGIYCQI*AASPAR
Trigger: CCGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAAT...GCCACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR TCA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAAGTCCTGAGTGTAGATaGTGTCATCCTCGATGTCGA +
Preference number: 4 (lower is better)
Translates to: GLAANVGRPYAKALSSSSSPECR*CHPRCR
Trigger: TCGACATCGAGGATGACATCATCTACACTCAGGACT...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR TCA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGCCTACGCTAAGGCCCTaGGCTCCTCCTCAGGCACTA +
Preference number: 4 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPPTLRP*APPQAL
Trigger: TAGTGCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGG...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS-3UTR TCA 90 bp GGTGGACACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACGGACGGGGCTCACGCTaGAGCCTGAAGTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGHCSHNGRGKCRKLPTYGRGSR*SLKLSL
Trigger: CAGGCTCAACTTCAGGCTTCAGCGTGAGCCCCGTCC...GTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGTCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp ACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTAAGTGTGGCCTGAGCTaGGGGGCGCAACCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: TVLTMAGESAGSCPRTVPKCGLS*GAQPQS
Trigger: GCTCTGGGGTTGCGCCCCTCAGCTCAGGCCACACTT...AGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCTGGATGACATTTTTGTaGCGTAACCTCCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSWMTFL*RNLLSS
Trigger: ACTACTGAGGAGGTTACGGCACAAAAATGTCATCCA...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CCA 90 bp TCACCGCGCCCGGCCGACAGGATCCCATTTCTATGCAATATCCAGGACAAGCCACCACCACCTCCATGCTaGACCCAGGGTCCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SPRPADRIPFLCNIQDKPPPPPC*TQGPGV
Trigger: GACTCCAGGACCCTGGGTCCAGCATGGAGGTGGTGG...TGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGGCGCGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp TCCCCTGGGGCACCCTGGCCCATGGTTGGTTCTAGAGGCCCAGGAGCCGCCACAACACTGTTCTCACAATaGCAGGGGAAAGTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SPGAPWPMVGSRGPGAATTLFSQ*QGKVQE
Trigger: TTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGT...TGTGGCGGCTCCTGGGCCTCTAGAACCAACCATGGGCCAGGGTGCCCCAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTAACCTCCTCAGTAGTTaGATTTCCTTCTTCACGTTG +
Preference number: 4 (lower is better)
Translates to: GGAACMAGSGAWSPHPPANLLSS*ISFFTL
Trigger: CAACGTGAAGAAGGAAATTCAACTACTGAGGAGGTT...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR TCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGACCAGATGTCCACCTTaGAGCCGGAGAAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGTRCPP*SRRRCP
Trigger: TGGACACCTTCTCCGGCTTCAAGGTGGACATCTGGT...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTTGGATGACATTTTTGTaGCGTAACCTCCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GGAACMAGSGAWSPHPPAWMTFL*RNLLSS
Trigger: ACTACTGAGGAGGTTACGGCACAAAAATGTCATCCA...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR GCA 90 bp GCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAACAATGCCCTGGCTATaGAGGTACTCCAGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: AKLFMTRPSPGPNTAKPGTMPWL*RYSRPS
Trigger: TGACGGCCTGGAGTACCTGCATAGCCAGGGCATTGT...TCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGCCAGGAGCCGCCACATaGTCATCTGTGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPPGAAT*SSVRTQ
Trigger: CTGTGTCCTCACAGATGAGCATGTGGCGGCTCCTGG...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR GCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGCTGTCCAGCATTTCCTaGATGCCACACACGCAGTAC +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGLSSIS*MPHTQY
Trigger: GTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAG...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp TCCCCTCCACCACGTCTGTTGCACCTGCCATGGCCGCAGGTGGGACCCCACCCAACCCTGCAGATACACTaGAAAACTCTTTATGACACG +
Preference number: 4 (lower is better)
Translates to: SPPPRLLHLPWPQVGPHPTLQIH*KTLYDT
Trigger: CGTGTCATAAAGAGTTTTGCAGTGTATCTGCAGGGT...TGGGTGGGGTCCCACCTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR TCA 90 bp TTGAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACGGCGCGGCTGGTAGATaGCCTCGGTGGAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: LNFPCWPGWSGSLALVSHGAAGR*PRWSRC
Trigger: GCATCGACTCCACCGAGGTCATCTACCAGCCGCGCC...GTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR TCA 90 bp TGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACAGGATCCCATAACCTCCTCAGTAGTTaGATTTCCCATGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: WSGSLALVSHRARPTGSHNLLSS*ISHVGQ
Trigger: CTGGCCAACATGGGAAATTCAACTACTGAGGAGGTT...ATGGGATCCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR GCA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGTGGATGACATTTTTGTaGCGTAACCTCCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMAWMTFL*RNLLSS
Trigger: ACTACTGAGGAGGTTACGGCACAAAAATGTCATCCA...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPGWRTS*PVRTQA
Trigger: TGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCC...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CCA 90 bp TTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACTTGAATTTCCCATGTTaGCCAGGATGGTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: LARMVWISCSRESPRPADLNFPC*PGWSGS
Trigger: AGATCCAGACCATCCTGGCCAACATGGGAAATTCAA...GTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR GCA 90 bp TTGAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACGGTCCACCACCTCCATaGTGGACCCAGGGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LNFPCWPGWSGSLALVSHGPPPP*WTQGPG
Trigger: TCCAGGACCCTGGGTCCAGCATGGAGGTGGTGGACC...GTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR GCA 90 bp TTGAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACGTGAACATGCCCAGCTaGTGCGGGTCCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: LNFPCWPGWSGSLALVSHVNMPS*CGSTTS
Trigger: GGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCAC...GTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR GCA 90 bp ACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACTGTCCCTGCAGCTTCCAGAACTTaGCACACACCCACCCCATGT +
Preference number: 4 (lower is better)
Translates to: TVLTMAGESAGSCPRTVPAASRT*HTPTPC
Trigger: ACATGGGGTGGGTGTGTGGCAAGTTCTGGAAGCTGC...AGGGACAGTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CCA 90 bp CACCGCGCCCGGCCGACAGGATCCCATTTCTATGCAATATCCAGGACAAGCCAACCATGTTGGCCAGGATaGTCTGGATCTCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HRARPTGSHFYAISRTSQPCWPG*SGSLAL
Trigger: GAGAGCAAGAGATCCAGACCATCCTGGCCAACATGG...TTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGGCGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAACACATCCACCAGCTaGATGACATTTTTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGNTSTS*MTFLCR
Trigger: ACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTT...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR GCA 90 bp GTTGAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCAGCACCTCCTTCACCTTaGCGTAAGAGCCTTCCCCCA +
Preference number: 4 (lower is better)
Translates to: VEFPMLARMVWISCSRESAPPSP*RKSLPP
Trigger: TGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGC...TGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp AGGATCCCATTTCTATGCAATATCCAGGACAAGCCAATCCAGAGCCAGGAAGTGCGTTGGCCTCCCCGTTaGGGATCCTTCGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: RIPFLCNIQDKPIQSQEVRWPPR*GSFATS
Trigger: AGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACG...CACTTCCTGGCTCTGGATTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp GTTGAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCATTGGCCAGGATGGTCTaGATCTCTTGCTCTCGTGAG +
Preference number: 4 (lower is better)
Translates to: VEFPMLARMVWISCSRESLARMV*ISCSRE
Trigger: CTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAA...TGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
3UTR CAA 72 bp TGTGCCGTAACCTCCTCAGTAGTTGAATTTCCCATGTaGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAG +
Preference number: 4 (lower is better)
Translates to: CAVTSSVVEFPM*ARMVWISCSRE
Trigger: CTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAACTACTGAGGAGGTTACGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp CCCGGCCGACAGGATCCCATTTCTATGCAATATCCAGGACAAGCCAATCCAGAGAACACATCCACCAGCTaGATGACATTTTTGTGCCGT +
Preference number: 4 (lower is better)
Translates to: PGRQDPISMQYPGQANPENTSTS*MTFLCR
Trigger: ACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTT...CTCTGGATTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CCA 90 bp CATGCCACACACGCAGTACTCCATCACCATATACATTTTCTGCTTCTCTTCGTTGTGGAGTCGATGCGGTaGATGAACGTGTCCATACCC +
Preference number: 4 (lower is better)
Translates to: HATHAVLHHHIHFLLLFVVESMR*MNVSIP
Trigger: GGGTATGGACACGTTCATCCACCGCATCGACTCCAC...AACGAAGAGAAGCAGAAAATGTATATGGTGATGGAGTACTGCGTGTGTGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR TCA 90 bp ATTTTCTGCTTCTCTTCGTTGTATAACACATCCACCAGCTGGATGACATTTTTGAGTCGATGCGGTGGATaGACGTGTCCATACCCACCG +
Preference number: 4 (lower is better)
Translates to: IFCFSSLYNTSTSWMTFLSRCGG*TCPYPP
Trigger: CGGTGGGTATGGACACGTTCATCCACCGCATCGACT...CAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR GCA 90 bp TTGAATTTCCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACAGGATCCCATTTCTATaGAATATCCAGGACAAGCCA +
Preference number: 4 (lower is better)
Translates to: LNFPCWPGWSGSLALVSHRIPFL*NIQDKP
Trigger: TGGCTTGTCCTGGATATTGCATAGAAATGGGATCCT...GTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGGAAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR GCA 90 bp ATATACATTTTCTGCTTCTCTTCGTTGTATAACACATCCACCAGCTGGATGACATGGATGACATTTTTGTaGCGTAACCTCCTCAGTAGT +
Preference number: 4 (lower is better)
Translates to: IYIFCFSSLYNTSTSWMTWMTFL*RNLLSS
Trigger: ACTACTGAGGAGGTTACGGCACAAAAATGTCATCCA...TGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGAAAATGTATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS GCA 90 bp CCGGCAGGTGTCGTCCGCCGCGAACGGGTGCAGTGCCTGTGGCGGTaGCGTGCAGCCCTCAGGGAGTGCCCGGGAGGGGGCGCCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PAGVVRRERVQCLWR*RAALRECPGGGAPG
Trigger: CCCTGGGGCGCCCCCTCCCGGGCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS CCA 90 bp GCTGGTCCGGCAGGTGTCGTCCGCCGCGAACGGGTGCAGTGCCTGTaGCGGTGCCGTGCAGCCCTCAGGGAGTGCCCGGGAGGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: AGPAGVVRRERVQCL*RCRAALRECPGGGA
Trigger: GGCGCCCCCTCCCGGGCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACCAGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS-3UTR CAA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGCCTCCGCCCTGGATTaGGTGCTCAGCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGASALD*VLSCAA
Trigger: GGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGC...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS GCA 90 bp GCCCTGGCTGGTCCGGCAGGTGTCGTCCGCCGCGAACGGGTGCAGTaGCTGTGGCGGTGCCGTGCAGCCCTCAGGGAGTGCCCGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ALAGPAGVVRRERVQ*LWRCRAALRECPGG
Trigger: CCCTCCCGGGCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACCAGCCAGGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS GCA 90 bp GGGGAGCCCTGGCTGGTCCGGCAGGTGTCGTCCGCCGCGAACGGGTaGAGTGCCTGTGGCGGTGCCGTGCAGCCCTCAGGGAGTGCCCGG +
Preference number: 5 (lower is better)
Translates to: GEPWLVRQVSSAANG*SACGGAVQPSGSAR
Trigger: CCGGGCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACCAGCCAGGGCTCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS CCA 90 bp ACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTGAGGGCCTaGCGCGGGCACCTGGCGGGGCTCCTGGACACGGGCTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: TSPGGRAEPAGRLRA*RGHLAGLLDTGCRV
Trigger: CACCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGTGCCCGCGCCAGGCCCTCAGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 90 bp TCTACACGTCAGTCCCGGCTGCGAGTCCAAGCCCGGTGCAGGGTCTaGGGACCGGCGGGCACCGGGGGTCCGGGACGGCGGCTCAGACGC +
Preference number: 5 (lower is better)
Translates to: STRQSRLRVQARCRV*GPAGTGGPGRRLRR
Trigger: GCGTCTGAGCCGCCGTCCCGGACCCCCGGTGCCCGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTGTAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS-3UTR CAA 90 bp GGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGCAGCCTCACTGCTGCTaGCAGGCCGACAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: GPALGRTQPSREHGGEGLQPHCC*QADSRR
Trigger: CCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTG...CAGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS CCA 90 bp GCGGGCACCGGGGGTCCGGGACGGCGGCTCAGACGCGAGTTCCAGTaGGACCCGGGCCTCAGAACTGGGAGACGGCCCGGTCAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: AGTGGPGRRLRREFQ*DPGLRTGRRPGQGQ
Trigger: TTGACCCTGACCGGGCCGTCTCCCAGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCTGAGCCGCCGTCCCGGACCCCCGGTGCCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS-3UTR CAA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCCCTCCGCCCTGGATTaGGTGCTCAGCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGPSALD*VLSCAA
Trigger: GGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGG...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000585465.2
CDS-3UTR CAA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCCAGCCTCACTGCTGCTaGCAGGCCGACAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: REGSARGCEVNKPRALPGQPHCC*QADSRR
Trigger: CCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTG...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CAA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCAGCCTCACTGCTGCTaGCAGGCCGACAGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGQPHCC*QADSRR
Trigger: CCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTG...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS CCA 90 bp CCTGGCGCGGGCACCTGGCGGGGCTCCTGGACACGGGCTGCAGGGTaGAAGGAAGACGGAAGAGGTCAGCCTGGGCACCGGTTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: PGAGTWRGSWTRAAG*KEDGRGQPGHRFSA
Trigger: GGCGGAGAACCGGTGCCCAGGCTGACCTCTTCCGTCTTCCTTCCACCCTGCAGCCCGTGTCCAGGAGCCCCGCCAGGTGCCCGCGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS-3UTR CAA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCTACTTGCCGATGAGCTaGGCCCGCTTGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: REGSARGCEVNKPRALPGYLPMS*ARLRRG
Trigger: GCCGCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTA...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp GGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAACTGCGCCACCGGTCCTaGGTGTCTGGGCTCGGTGGG +
Preference number: 5 (lower is better)
Translates to: GTEAWRPPLREGGRNRQELRHRS*VSGLGG
Trigger: CCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAG...TTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS TCA 90 bp GGGAGGGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTaGGCTCCTCCTCAGGCACTACTGCGGCGCCGGCCGAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: GRGWLPMWAAPTLRP*APPQALLRRRPRGF
Trigger: GAAGCCTCTCGGCCGGCGCCGCAGTAGTGCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCCCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS GCA 90 bp AACGATTGTTCTACACGTCAGTCCCGGCTGCGAGTCCAAGCCCGGTaGAGGGTCTGCGGACCGGCGGGCACCGGGGGTCCGGGACGGCGG +
Preference number: 5 (lower is better)
Translates to: NDCSTRQSRLRVQAR*RVCGPAGTGGPGRR
Trigger: CCGCCGTCCCGGACCCCCGGTGCCCGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTGTAGAACAATCGTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS GCA 90 bp GGCAGGGTTGGGGGCCCGGCCTCCGCCCTGGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTCATACACACGGCCTTGGGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRVGGPASALDLVLS*AASVPFIHTALGRP
Trigger: GGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGCCGGGCCCCCAACCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS-3UTR CAA 90 bp GGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGGGGAGGGGCTGCCCAGGTCGGAGATTTaGAGGGTGCCACCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GPALGRTQPSREHGGEGLPRSEI*RVPPVV
Trigger: CACCACCGGTGGCACCCTCAAAATCTCCGACCTGGG...CAGCCCCTCCCCGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGC +
Preference number: 5 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGRMENL*AGSYSS
Trigger: GCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCG...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGTTCATACACACGGCCTaGGGGAGGCCCCGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRFIHTA*GRPRRC
Trigger: ACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAA...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS-3UTR CAA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCCCATAGGTCTGAGCTaGGGCCCAGCCCGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNPIGLS*GPARLW
Trigger: CCAGAGACGGGCTGGGCCCAAGCTCAGACCTATGGG...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS GCA 90 bp GCCCGGCCTCCGCCCTGGATTTGGTGCTCAGCTGCGCCGCCTCTGTaGCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: ARPPPWIWCSAAPPL*RSYTRPWGGPGAVH
Trigger: ATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGCCGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS CCA 90 bp CTGGACACGGGCTGCAGGGTGGAAGGAAGACGGAAGAGGTCAGCCTaGGCACCGGTTCTCCGCCTCCCGCGGGCCCCTGGGAGGATGGAG +
Preference number: 5 (lower is better)
Translates to: LDTGCRVEGRRKRSA*APVLRLPRAPGRME
Trigger: CTCCATCCTCCCAGGGGCCCGCGGGAGGCGGAGAACCGGTGCCCAGGCTGACCTCTTCCGTCTTCCTTCCACCCTGCAGCCCGTGTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 90 bp AGAGGAAAGGCTAGGTCCAGCAGGGAGCCACACCTGCGCCTGCAGTaGCCACCCTCGTCCGGCCGAGCCACGTCTGGCAGGGCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: RGKARSSREPHLRLQ*PPSSGRATSGRAPD
Trigger: ATCCGGGGCCCTGCCAGACGTGGCTCGGCCGGACGAGGGTGGCCACTGCAGGCGCAGGTGTGGCTCCCTGCTGGACCTAGCCTTTCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591133.2
CDS-3UTR CAA 90 bp TGGTCTCCACACCCGCCAGCTGGTCTGCGGCGGGGCCGCCGGACGGCGCTGGGCGTGAGCGGTCCTTCCTaGTGTTCCGACTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: WSPHPPAGLRRGRRTALGVSGPS*CSDFPS
Trigger: AGAAGGGAAGTCGGAACACAAGGAAGGACCGCTCAC...GCCCAGCGCCGTCCGGCGGCCCCGCCGCAGACCAGCTGGCGGGTGTGGAGACCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCTCCCCCATCAGGTACTaGCCGATGAGCTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: PPGKAPPGAAKSTSRVHCSPIRY*PMSLAR
Trigger: GCGGGCCAAGCTCATCGGCAAGTACCTGATGGGGGA...GCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCCTGCGCCACCGGTCCTaGGTGTCTGGGCTCGGTGGG +
Preference number: 5 (lower is better)
Translates to: LAANVGRPYAKALSSSSGLRHRS*VSGLGG
Trigger: CCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAG...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCACCCTCCGCCCTGGATTaGGTGCTCAGCTGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: GLAANVGRPYAKALSSSSPSALD*VLSCAA
Trigger: GGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGG...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CAA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGACAGCCGGCGGATCTaGCTGCTGGCGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLDSRRI*LLAEQA
Trigger: GGCCTGCTCCGCCAGCAGCAAGATCCGCCGGCTGTC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000585465.2
CDS-3UTR CAA 90 bp CTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCTCCTCGACAGCCGGCGGATCTaGCTGCTGGCGGAGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSHAEWSGGPSPCWVLLLDSRRI*LLAEQA
Trigger: GGCCTGCTCCGCCAGCAGCAAGATCCGCCGGCTGTC...GAGGAGGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS TCA 90 bp GGTGGGAGTTCGGAGGGTGAACAGGGCCCAGAAGCAGGGTGGAGCTaGGGGACCTGGCAAACCAGGCCCTGCGGGGAGGTCGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GGSSEGEQGPEAGWS*GTWQTRPCGEVGLS
Trigger: GGAGAGGCCGACCTCCCCGCAGGGCCTGGTTTGCCAGGTCCCTCAGCTCCACCCTGCTTCTGGGCCCTGTTCACCCTCCGAACTCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 90 bp ACGGCGGCTCAGACGCGAGTTCCAGTGGGACCCGGGCCTCAGAACTaGGAGACGGCCCGGTCAGGGTCAACTTCGTCCTCGGGGACCCTG +
Preference number: 5 (lower is better)
Translates to: TAAQTRVPVGPGPQN*ETARSGSTSSSGTL
Trigger: CAGGGTCCCCGAGGACGAAGTTGACCCTGACCGGGCCGTCTCCCAGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCTGAGCCGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS CCA 90 bp TTGAAGCCGGAGAAGGTGTCCAGGCCGTTGGCAATCTCGGGCGGCTaGAAAGCCGGGGAGCCCTGGCTGGTCCGGCAGGTGTCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: LKPEKVSRPLAISGG*KAGEPWLVRQVSSA
Trigger: GGCGGACGACACCTGCCGGACCAGCCAGGGCTCCCCGGCTTTCCAGCCGCCCGAGATTGCCAACGGCCTGGACACCTTCTCCGGCTTCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 90 bp CAGACACCAGGCCCCGAGACGGCACCCTCCACGGGGATCGCTACGTaGCCAAGCCACCCAAAGGCCACATGGCAACCACGCGCAGCCACG +
Preference number: 5 (lower is better)
Translates to: QTPGPETAPSTGIAT*PSHPKATWQPRAAT
Trigger: CGTGGCTGCGCGTGGTTGCCATGTGGCCTTTGGGTGGCTTGGCCACGTAGCGATCCCCGTGGAGGGTGCCGTCTCGGGGCCTGGTGTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS-3UTR CAA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCATACTTGCCGATGAGCTaGGCCCGCTTGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: GLAANVGRPYAKALSSSSYLPMS*ARLRRG
Trigger: GCCGCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTA...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp GGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGCCCCCGACCAGATGTCCACCTaGAAGCCGGAGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GDPRAQRRPRREPDPTAPDQMST*KPEKVS
Trigger: GGACACCTTCTCCGGCTTCAAGGTGGACATCTGGTC...GGGGGCTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CAA 90 bp GAGGCCTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCTTCATACACACGGCCTaGGGGAGGCCCCGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: EASAMPSGLAALPPAGYSFIHTA*GRPRRC
Trigger: ACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAA...GGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CAA 90 bp GGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTTTCATACACACGGCCTaGGGGAGGCCCCGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: GGAACMAGSGAWSPHPPAFIHTA*GRPRRC
Trigger: ACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAA...AGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000585465.2
ENST00000586243.5
CDS TCA 90 bp CAGTGCCACCTGCTGCCATGCGTAGGAAGTGCAGCAGGACAACCCTaGCAGACCCTGCAAGCCAGGGAGCCCCCGAGGGTGGGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QCHLLPCVGSAAGQP*QTLQAREPPRVGLG
Trigger: CCCCAGCCCCACCCTCGGGGGCTCCCTGGCTTGCAGGGTCTGTCAGGGTTGTCCTGCTGCACTTCCTACGCATGGCAGCAGGTGGCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 90 bp CGTCCGCGCCGTGCAGGTCCTCCAAGTACGGCACCACAGTCATGCTaGGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGATGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RPRRAGPPSTAPQSC*ATGPWCLGSVGWAL
Trigger: CAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCACGGCGCGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000652231.1
CDS GCA 90 bp CCTCGTCCGCGCCGTGCAGGTCCTCCAAGTACGGCACCACAGTCATaGTGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGATGGGCA +
Preference number: 5 (lower is better)
Translates to: PRPRRAGPPSTAPQS*CATGPWCLGSVGWA
Trigger: TGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCACGGCGCGGACGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000652231.1
CDS GCA 90 bp CTGTCAGCTGGGCACAGGCCTGAGACCCCACCAACCGTCCCCGCCTaGCCAGCCTCTGTTGTCAGGCCCTGGGTGATACCTGGACGCTCC +
Preference number: 5 (lower is better)
Translates to: LSAGHRPETPPTVPA*PASVVRPWVIPGRS
Trigger: GGAGCGTCCAGGTATCACCCAGGGCCTGACAACAGAGGCTGGGCAGGCGGGGACGGTTGGTGGGGTCTCAGGCCTGTGCCCAGCTGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS-3UTR CAA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACGTTGGCCTCCCCGTaGGGGATCCTTCGCAACTTC +
Preference number: 5 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSTLASP*GILRNF
Trigger: GAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGT...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp GGCGTGGTCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGC +
Preference number: 5 (lower is better)
Translates to: GVVGTEAWRPPLREGGRNRMENL*AGSYSS
Trigger: GCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCG...GTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGACCACGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCCCTCCTGCCTGGGATTaGCCTGGCTGCCCGTCTCAG +
Preference number: 5 (lower is better)
Translates to: LAANVGRPYAKALSSSSGPPAWD*PGCPSQ
Trigger: CTGAGACGGGCAGCCAGGCAAATCCCAGGCAGGAGG...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CAA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGAGGAGCCGTGGTGGTaGGCGAGGACTCCGCGAACA +
Preference number: 5 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLEEPWW*ARTPRT
Trigger: TGTTCGCGGAGTCCTCGCCAACCACCACGGCTCCTC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CAA 90 bp CAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGAAGACTCACCCTGGCCCATGGTaGGTTCTAGAGGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: QKHGGHLSGRAGGTGRKTHPGPW*VLEAQE
Trigger: CTCCTGGGCCTCTAGAACCAACCATGGGCCAGGGTG...AGTCTTCCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS GCA 90 bp GGCTATGCAGGTACTCCAGGCCGTCAATCAGCTGACAGAAGTACCTaGGGGCAGCACACACCCGTCCTGGGGCCGAGGCCTCCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: GYAGTPGRQSADRST*GQHTPVLGPRPPCP
Trigger: GGGGCAGGGAGGCCTCGGCCCCAGGACGGGTGTGTGCTGCCCGCAGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591133.2
CDS CCA 90 bp CTGGACGGCCAGGGCGGTTCCGTTCTCCCAAGGCCACTGGGCAGATaGACGGACGGCCAGTGCCACCTGCTGCCATGCGTAGGAAGTGCA +
Preference number: 5 (lower is better)
Translates to: LDGQGGSVLPRPLGR*TDGQCHLLPCVGSA
Trigger: TGCACTTCCTACGCATGGCAGCAGGTGGCACTGGCCGTCCGTCCATCTGCCCAGTGGCCTTGGGAGAACGGAACCGCCCTGGCCGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS-3UTR CAA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTGTGAGCGGTCCTTCCTaGTGTTCCGACTTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGVSGPS*CSDFPS
Trigger: AGAAGGGAAGTCGGAACACAAGGAAGGACCGCTCAC...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGTCCCCCATCAGGTACTaGCCGATGAGCTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLSPIRY*PMSLAR
Trigger: GCGGGCCAAGCTCATCGGCAAGTACCTGATGGGGGA...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp GCACCCTCCGAGTCCCCGCCGCGTCTGCACCATCCCGCGATGGCGTTTCTCGTGACGTTGGCCTCCCCGTaGGGGATCCTTCGCAACTTC +
Preference number: 5 (lower is better)
Translates to: APSESPPRLHHPAMAFLVTLASP*GILRNF
Trigger: GAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGT...CACGAGAAACGCCATCGCGGGATGGTGCAGACGCGGCGGGGACTCGGAGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CAA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGATTTCCTTCTTCACGTaGGCCTCCCCGTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGISFFT*ASPLGI
Trigger: GATCCCCAACGGGGAGGCCAACGTGAAGAAGGAAAT...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp TCGGCACAGAAGCATGGCGGCCACCTCTCCGGGAGGGCGGGCGGAACCGGCAGGATTTCCTTCTTCACGTaGGCCTCCCCGTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: SAQKHGGHLSGRAGGTGRISFFT*ASPLGI
Trigger: GATCCCCAACGGGGAGGCCAACGTGAAGAAGGAAAT...CCTGCCGGTTCCGCCCGCCCTCCCGGAGAGGTGGCCGCCATGCTTCTGTGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGCAGCAGGTTCCCCGGCTaGATGTCCTTGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: REGSARGCEVNKPRALPGSRFPG*MSLCTM
Trigger: CATTGTGCACAAGGACATCAAGCCGGGGAACCTGCT...GCCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCGTGCACTGCCGGGAGCAGGTTCCCCGGCTaGATGTCCTTGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: PGRLRPGLRSQQAACTAGSRFPG*MSLCTM
Trigger: CATTGTGCACAAGGACATCAAGCCGGGGAACCTGCT...CCCGGCAGTGCACGCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS TCA 90 bp CCGTTCATACACACGGCCTTGGGGAGGCCCCGGCGCTGTCCATTGTaGCTGGCCTCCTCTTCTGGGACCTGTCCGGGCACCGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PFIHTALGRPRRCPL*LASSSGTCPGTVKS
Trigger: GGACTTCACGGTGCCCGGACAGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTGTATGAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
CDS TCA 90 bp AGGCCACATGGCAACCACGCGCAGCCACGTGACGGTCACCATGACTaGCTAGCGCGGGCTATGCTCACGGCTGGCTGTGGCATCCAGGCG +
Preference number: 5 (lower is better)
Translates to: RPHGNHAQPRDGHHD*LARAMLTAGCGIQA
Trigger: CGCCTGGATGCCACAGCCAGCCGTGAGCATAGCCCGCGCTAGTCAGTCATGGTGACCGTCACGTGGCTGCGCGTGGTTGCCATGTGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 90 bp ATACCCACCGACATCAGCTCGCCCTCCGTGAACATGCCCAGCTGCTaGGGGTCCACCACCTCCATGCTGGACCCAGGGTCCTGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: IPTDISSPSVNMPSC*GSTTSMLDPGSWSP
Trigger: GGGACTCCAGGACCCTGGGTCCAGCATGGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGATGTCGGTGGGTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS GCA 90 bp GCGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGATGGGCACTGGTaGTTCAGCCGGAGGATGTTTCTTCCGGAACCAGCTGTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: APPVLGVWARWDGHW*FSRRMFLPEPAVLP
Trigger: CGGCAGCACAGCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS GCA 90 bp CAGATGGACGGACGGCCAGTGCCACCTGCTGCCATGCGTAGGAAGTaGAGCAGGACAACCCTGACAGACCCTGCAAGCCAGGGAGCCCCC +
Preference number: 5 (lower is better)
Translates to: QMDGRPVPPAAMRRK*SRTTLTDPASQGAP
Trigger: GGGGGCTCCCTGGCTTGCAGGGTCTGTCAGGGTTGTCCTGCTGCACTTCCTACGCATGGCAGCAGGTGGCACTGGCCGTCCGTCCATCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 90 bp GGTCCTCCAAGTACGGCACCACAGTCATGCTGCGCCACCGGTCCTTaGTGTCTGGGCTCGGTGGGATGGGCACTGGTGCTTCAGCCGGAG +
Preference number: 5 (lower is better)
Translates to: GPPSTAPQSCCATGP*CLGSVGWALVLQPE
Trigger: CTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 90 bp CCACCCTTGAGTCACTCCCGGGGTACATTGTGTGGCCTTTTGCAGTaGGGCCTGGCGGGCTCTGACGCTGGTGGATGGGCTGTGGGCACC +
Preference number: 5 (lower is better)
Translates to: PPLSHSRGTLCGLLQ*GLAGSDAGGWAVGT
Trigger: GGTGCCCACAGCCCATCCACCAGCGTCAGAGCCCGCCAGGCCCCACTGCAAAAGGCCACACAATGTACCCCGGGAGTGACTCAAGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS-3UTR CAA 90 bp AGCAGGGTGACCCGAGAGCGCAAAGGCGGCCGCGACGTGAGCCCGACCCCACAGTTCTTCTTGAGGATCTaGACGGCCCTCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: SRVTRERKGGRDVSPTPQFFLRI*TALLHS
Trigger: GCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAA...CTGTGGGGTCGGGCTCACGTCGCGGCCGCCTTTGCGCTCTCGGGTCACCCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CAA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCCCAGGTCGGAGATTTaGAGGGTGCCACCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EATGGASSLHIKCMEAASPRSEI*RVPPVV
Trigger: CACCACCGGTGGCACCCTCAAAATCTCCGACCTGGG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CAGAAAGCCCCCTCAGGCTCCAGCCCGAGCGCAGCAAGCATCCACCCTGCAGATCCTGGGATCTGGGTGTaGGCAGCAGGACCCGCATCC +
Preference number: 5 (lower is better)
Translates to: QKAPSGSSPSAASIHPADPGIWV*AAGPAS
Trigger: GGATGCGGGTCCTGCTGCCAACACCCAGATCCCAGG...ATCTGCAGGGTGGATGCTTGCTGCGCTCGGGCTGGAGCCTGAGGGGGCTTTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS GCA 90 bp TCCATACCCACCGACATCAGCTCGCCCTCCGTGAACATGCCCAGCTaGTGCGGGTCCACCACCTCCATGCTGGACCCAGGGTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: SIPTDISSPSVNMPS*CGSTTSMLDPGSWS
Trigger: ACTCCAGGACCCTGGGTCCAGCATGGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGATGTCGGTGGGTATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS GCA 90 bp CGGCCCTCCTGCACAGCGTCTCCGAGTCCAGCACCTCCTTCACCTTaGCGTAAGAGCCTTCCCCCAGCAGGTCCCCCATCAGGTACTTGC +
Preference number: 5 (lower is better)
Translates to: RPSCTASPSPAPPSP*RKSLPPAGPPSGTC
Trigger: GCAAGTACCTGATGGGGGACCTGCTGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGCTGGACTCGGAGACGCTGTGCAGGAGGGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS CCA 90 bp GCTGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGATGGGCACTaGTGCTTCAGCCGGAGGATGTTTCTTCCGGAACCAGCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AAPPVLGVWARWDGH*CFSRRMFLPEPAVL
Trigger: CAGCACAGCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS-3UTR CAA 90 bp CTCCCACGCCCGCCCGGGAAGGCTCCGCCCGGGGCTGCGAAGTCAACAAGCCGCTTCCAACAGAAACGATaGTTCTACACGTCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: LPRPPGKAPPGAAKSTSRFQQKR*FYTSVP
Trigger: CGGGACTGACGTGTAGAACAATCGTTTCTGTTGGAA...GCGGCTTGTTGACTTCGCAGCCCCGGGCGGAGCCTTCCCGGGCGGGCGTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCCGCAACTTCTTCTTCTaGAGGATCTTGACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: RAASRWRCMHGGVRSLVSRNFFF*RILTAL
Trigger: GAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCG...GGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGACGTTGGCCTCCCCGTaGGGGATCCTTCGCAACTTC +
Preference number: 5 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMATLASP*GILRNF
Trigger: GAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGT...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp CCGCACACTCCTGCTTGCTCCGGGTTTTCTCTGGGGTCCCAAGAGCGCAGTGGCCCCAGGTCGGAGATTTaGAGGGTGCCACCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PHTPACSGFSLGSQERSGPRSEI*RVPPVV
Trigger: CACCACCGGTGGCACCCTCAAAATCTCCGACCTGGG...GCCACTGCGCTCTTGGGACCCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CAA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGGACCAGATGTCCACCTaGAAGCCGGAGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLDQMST*KPEKVS
Trigger: GGACACCTTCTCCGGCTTCAAGGTGGACATCTGGTC...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAGGCCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGC +
Preference number: 5 (lower is better)
Translates to: LAANVGRPYAKALSSSSGRMENL*AGSYSS
Trigger: GCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCG...GCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCACCGCACACTCCTGCTaGCTCCGGGTTTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: ATGGASSLHIKCMEAASLTAHSC*LRVFSG
Trigger: CCCAGAGAAAACCCGGAGCAAGCAGGAGTGTGCGGT...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CAA 90 bp GCTGCCCAGGCCATGCCCGCCCCCGGGTCAGGCCCAGGTGTATCCAGCCTGAAACTGAGGCAGAATTGCTaGAATCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AAQAMPAPGSGPGVSSLKLRQNC*NPGGGG
Trigger: ACCTCCACCTCCCGGATTCAAGCAATTCTGCCTCAG...TTTCAGGCTGGATACACCTGGGCCTGACCCGGGGGCGGGCATGGCCTGGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CAA 90 bp CTCAGCCATGCCGAGTGGTCTGGCGGCCCTTCCCCCTGCTGGGTACTCCTCCTCGAGGCTGAGGCAGAATaGCTTGAATCCGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSHAEWSGGPSPCWVLLLEAEAE*LESGRW
Trigger: CCACCTCCCGGATTCAAGCAATTCTGCCTCAGCCTC...GAGGAGGAGTACCCAGCAGGGGGAAGGGCCGCCAGACCACTCGGCATGGCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS GCA 90 bp ACCCTTCTTCCAACAGAAACGATTGTTCTACACGTCAGTCCCGGCTaGGAGTCCAAGCCCGGTGCAGGGTCTGCGGACCGGCGGGCACCG +
Preference number: 5 (lower is better)
Translates to: TLLPTETIVLHVSPG*ESKPGAGSADRRAP
Trigger: CGGTGCCCGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTGTAGAACAATCGTTTCTGTTGGAAGAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS GCA 90 bp ATGTCATCCTCGATGTCGAAGAGGTCCTCGTCCTCGTCCGCGCCGTaGAGGTCCTCCAAGTACGGCACCACAGTCATGCTGCGCCACCGG +
Preference number: 5 (lower is better)
Translates to: MSSSMSKRSSSSSAP*RSSKYGTTVMLRHR
Trigger: CCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCACGGCGCGGACGAGGACGAGGACCTCTTCGACATCGAGGATGACAT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000652231.1
CDS CCA 90 bp CAGTCATGCTGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGATaGGCACTGGTGCTTCAGCCGGAGGATGTTTCTTCCGGAACCAGC +
Preference number: 5 (lower is better)
Translates to: QSCCATGPWCLGSVG*ALVLQPEDVSSGTS
Trigger: GCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS-3UTR CAA 90 bp GCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCTTCTTCTTGAGGATCTaGACGGCCCTCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: ASRWRCMHGGVRSLVSTPFFLRI*TALLHS
Trigger: GCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAA...GGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CGGCCGCGCGGCTTCCAGGTGGCGCTGCATGCATGGCGGGGTCAGGAGCCTGGTCCCAAGCTTTATTTATaGCCAAATTTGGGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: RPRGFQVALHAWRGQEPGPKLYL*PNLGGL
Trigger: GAGGCCGCCCAAATTTGGCAATAAATAAAGCTTGGG...ACCAGGCTCCTGACCCCGCCATGCATGCAGCGCCACCTGGAAGCCGCGCGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS CCA 90 bp CACCACAGTCATGCTGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTaGGATGGGCACTGGTGCTTCAGCCGGAGGATGTTTCTTCCGGAA +
Preference number: 5 (lower is better)
Translates to: HHSHAAPPVLGVWAR*DGHWCFSRRMFLPE
Trigger: TTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 90 bp CAAGTACGGCACCACAGTCATGCTGCGCCACCGGTCCTTGGTGTCTaGGCTCGGTGGGATGGGCACTGGTGCTTCAGCCGGAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: QVRHHSHAAPPVLGV*ARWDGHWCFSRRMF
Trigger: AAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 90 bp TCCGGAACCAGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCATCCCTGAGGAGAAGCCGGCGAGGA +
Preference number: 5 (lower is better)
Translates to: SGTSCAAGSAGWRTS*PVRTQASLRRSRRG
Trigger: TCCTCGCCGGCTTCTCCTCAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS-3UTR CAA 90 bp GCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACAGGTTCTTCTTGAGGATCTaGACGGCCCTCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: ARMVWISCSRESPRPADRFFLRI*TALLHS
Trigger: GCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAA...CCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CAA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGATTTCCTTCTTCACGTaGGCCTCCCCGTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMAISFFT*ASPLGI
Trigger: GATCCCCAACGGGGAGGCCAACGTGAAGAAGGAAAT...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCTATTTATTGCCAAATTaGGGCGGCCTCGCCCGCACG +
Preference number: 5 (lower is better)
Translates to: EATGGASSLHIKCMEAASYLLPN*GGLART
Trigger: CGTGCGGGCGAGGCCGCCCAAATTTGGCAATAAATA...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326873.12
CDS-3UTR CAA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGTCCCCCATCAGGTACTaGCCGATGAGCTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPSPIRY*PMSLAR
Trigger: GCGGGCCAAGCTCATCGGCAAGTACCTGATGGGGGA...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp GAGGCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCGCAACTTCTTCTTCTaGAGGATCTTGACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: EATGGASSLHIKCMEAASRNFFF*RILTAL
Trigger: GAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCG...GGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGCGCAACTTCTTCTTCTaGAGGATCTTGACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMARNFFF*RILTAL
Trigger: GAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCG...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGCTGAGCCTAGGGGTTaGATGAGGGGCCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPAEPRG*MRGPGV
Trigger: CACTCCTGGGCCCCTCATCAAACCCCTAGGCTCAGC...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS-3UTR CAA 90 bp GGTGGACACTGTTCTCACAATGGCAGGGGAAAGTGCAGGAAGCTGCCCACGTACCCTCCACCACGTCTGTaGCACCTGCCATGGCCGCAG +
Preference number: 5 (lower is better)
Translates to: GGHCSHNGRGKCRKLPTYPPPRL*HLPWPQ
Trigger: CTGCGGCCATGGCAGGTGCAACAGACGTGGTGGAGG...GTACGTGGGCAGCTTCCTGCACTTTCCCCTGCCATTGTGAGAACAGTGTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585465.2
CDS CCA 90 bp TCCGGAACCAGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCATCCCTTTCAGCAGGTCAGAGAGCG +
Preference number: 5 (lower is better)
Translates to: SGTSCAAGSAGWRTS*PVRTQASLSAGQRA
Trigger: CGCTCTCTGACCTGCTGAAAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000591133.2
ENST00000652231.1
CDS-3UTR CAA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGTTCCAACAGAAACGATaGTTCTACACGTCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLFQQKR*FYTSVP
Trigger: CGGGACTGACGTGTAGAACAATCGTTTCTGTTGGAA...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp GCCCGGCCGACAGGATCCCATTTCTATGCAATATCCAGGACAAGCCAATCCAGATACTTGCCGATGAGCTaGGCCCGCTTGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: ARPTGSHFYAISRTSQSRYLPMS*ARLRRG
Trigger: GCCGCGCCGCAAGCGGGCCAAGCTCATCGGCAAGTA...TCTGGATTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CAA 90 bp CACCGCGCCCGGCCGACAGGATCCCATTTCTATGCAATATCCAGGACAAGCCAATCCCCCATCAGGTACTaGCCGATGAGCTTGGCCCGC +
Preference number: 5 (lower is better)
Translates to: HRARPTGSHFYAISRTSQSPIRY*PMSLAR
Trigger: GCGGGCCAAGCTCATCGGCAAGTACCTGATGGGGGA...TTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGGCGCGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CAA 90 bp GCTGCATGCATGGCGGGGTCAGGAGCCTGGTCTCCACACCCGCCAGCTGGTCTGAGCTGGATGACATTTTaGTGCCGTAACCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: AACMAGSGAWSPHPPAGLSWMTF*CRNLLS
Trigger: ACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCT...CAGACCAGCTGGCGGGTGTGGAGACCAGGCTCCTGACCCCGCCATGCATGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp GGGCTGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTGAGCTCCTCCTCAAGCTGGATGACATTTTaGTGCCGTAACCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: GLAANVGRPYAKALSSSSSWMTF*CRNLLS
Trigger: ACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCT...TGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp CTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGAGCATGGCGTTCCAACAGAAACGATaGTTCTACACGTCAGTCCCG +
Preference number: 5 (lower is better)
Translates to: LYDTAQPWAEHSQAGSMAFQQKR*FYTSVP
Trigger: CGGGACTGACGTGTAGAACAATCGTTTCTGTTGGAA...CGCCATGCTCCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp TGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGGTTCTTCTTGAGGATCTaGACGGCCCTCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: CKTLYDTAQPWAEHSQAGFFLRI*TALLHS
Trigger: GCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAA...CCCGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp CCCATGTTGGCCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGCGCAACTTCTTCTTCTaGAGGATCTTGACGGCCCTC +
Preference number: 5 (lower is better)
Translates to: PMLARMVWISCSRESPRPRNFFF*RILTAL
Trigger: GAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCG...CGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGGCCAACATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CAA 90 bp GCCACGGGCGGGGCCAGTAGTCTCCACATAAAGTGCATGGAGGCCGCCTCCCTCAGCTGGATGACATTTTaGTGCCGTAACCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: ATGGASSLHIKCMEAASLSWMTF*CRNLLS
Trigger: ACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCT...GAGGGAGGCGGCCTCCATGCACTTTATGTGGAGACTACTGGCCCCGCCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326873.12
ENST00000586243.5
CDS-3UTR CAA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGGACCAGATGTCCACCTaGAAGCCGGAGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPDQMST*KPEKVS
Trigger: GGACACCTTCTCCGGCTTCAAGGTGGACATCTGGTC...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS-3UTR CAA 90 bp CCAGGATGGTCTGGATCTCTTGCTCTCGTGAGTCACCGCGCCCGGCCGACAGGAAGCTGGATGACATTTTaGTGCCGTAACCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: PGWSGSLALVSHRARPTGSWMTF*CRNLLS
Trigger: ACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCT...TCCTGTCGGCCGGGCGCGGTGACTCACGAGAGCAAGAGATCCAGACCATCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS-3UTR CAA 90 bp ACTGCAAAACTCTTTATGACACGGCCCAGCCCTGGGCCGAACACAGCCAAGCCGAGCAGGTTCCCCGGCTaGATGTCCTTGTGCACAATG +
Preference number: 5 (lower is better)
Translates to: TAKLFMTRPSPGPNTAKPSRFPG*MSLCTM
Trigger: CATTGTGCACAAGGACATCAAGCCGGGGAACCTGCT...CGGCTTGGCTGTGTTCGGCCCAGGGCTGGGCCGTGTCATAAAGAGTTTTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652231.1
CDS CCA 90 bp CTGGGAAGACATTTAGGAGGACCTTGTGGTTTCCCGAGGTGGATGTaGCAGAGATCGAGCCCACGCCTCTTCCTAGCTCACTTGGTGACC +
Preference number: 5 (lower is better)
Translates to: LGRHLGGPCGFPRWM*QRSSPRLFLAHLVT
Trigger: GGTCACCAAGTGAGCTAGGAAGAGGCGTGGGCTCGATCTCTGCCACATCCACCTCGGGAAACCACAAGGTCCTCCTAAATGTCTTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585748.2
CDS-3UTR CAA 90 bp CCCGGCCGACAGGATCCCATTTCTATGCAATATCCAGGACAAGCCAATCCAGAGACGTTGGCCTCCCCGTaGGGGATCCTTCGCAACTTC +
Preference number: 5 (lower is better)
Translates to: PGRQDPISMQYPGQANPETLASP*GILRNF
Trigger: GAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGT...CTCTGGATTGGCTTGTCCTGGATATTGCATAGAAATGGGATCCTGTCGGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS GCA 90 bp TGGCACACTGGGAAACGCTTCTCCGGCACGCTGTCCAGCATTTCCTaGATGCCACACACGCAGTACTCCATCACCATATACATTTTCTGC +
Preference number: 5 (lower is better)
Translates to: WHTGKRFSGTLSSIS*MPHTQYSITIYIFC
Trigger: GCAGAAAATGTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGCGTTTCCCAGTGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000652231.1
CDS GCA 90 bp TTCCTAGCTCACTTGGTGACCTCAGGGCAGCTTCTGAACAGTTCGTaGCTCAGTTTCCTCCCTCGTGAAATGCAGGTAATACCAGTCGCT +
Preference number: 5 (lower is better)
Translates to: FLAHLVTSGQLLNSS*LSFLPREMQVIPVA
Trigger: AGCGACTGGTATTACCTGCATTTCACGAGGGAGGAAACTGAGGCACGAACTGTTCAGAAGCTGCCCTGAGGTCACCAAGTGAGCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585748.2
CDS GCA 90 bp ACACTGGGAAACGCTTCTCCGGCACGCTGTCCAGCATTTCCTGCATaGCACACACGCAGTACTCCATCACCATATACATTTTCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: TLGNASPARCPAFPA*HTRSTPSPYTFSAS
Trigger: AGAAGCAGAAAATGTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGCGTTTCCCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000652231.1
CDS-3UTR CAA 90 bp TACTCCATCACCATATACATTTTCTGCTTCTCTTCGTTGTATAACACATCCACCCAGGAGTTCTTCACGTaGGCCTCCCCGTTGGGGATC +
Preference number: 5 (lower is better)
Translates to: YSITIYIFCFSSLYNTSTQEFFT*ASPLGI
Trigger: GATCCCCAACGGGGAGGCCAACGTGAAGAACTCCTG...GGTGGATGTGTTATACAACGAAGAGAAGCAGAAAATGTATATGGTGATGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS TCA 90 bp ACATTTTCTGCTTCTCTTCGTTGTATAACACATCCACCAGCTGGATaGCATTTTTGTGCCGTAACCTCCTCAGTAGTTGAATTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TFSASLRCITHPPAG*HFCAVTSSVVEFPS
Trigger: AGAAGGAAATTCAACTACTGAGGAGGTTACGGCACAAAAATGTCATCCAGCTGGTGGATGTGTTATACAACGAAGAGAAGCAGAAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000652231.1
CDS GCA 72 bp CCGCCGCGAACGGGTGCAGTGCCTGTGGCGGTGCCGTaGAGCCCTCAGGGAGTGCCCGGGAGGGGGCGCCCC +
Preference number: 6 (lower is better)
Translates to: PPRTGAVPVAVP*SPQGVPGRGRP
Trigger: GGGGCGCCCCCTCCCGGGCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS GCA 72 bp GTCGTCCGCCGCGAACGGGTGCAGTGCCTGTGGCGGTaGCGTGCAGCCCTCAGGGAGTGCCCGGGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: VVRRERVQCLWR*RAALRECPGGG
Trigger: GCCCCCTCCCGGGCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS GCA 72 bp TCTACACGTCAGTCCCGGCTGCGAGTCCAAGCCCGGTaGAGGGTCTGCGGACCGGCGGGCACCGGGGGTCCG +
Preference number: 6 (lower is better)
Translates to: STRQSRLRVQAR*RVCGPAGTGGP
Trigger: CGGACCCCCGGTGCCCGCCGGTCCGCAGACCCTGCACCGGGCTTGGACTCGCAGCCGGGACTGACGTGTAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS GCA 72 bp GGTCCGGCAGGTGTCGTCCGCCGCGAACGGGTGCAGTaGCTGTGGCGGTGCCGTGCAGCCCTCAGGGAGTGC +
Preference number: 6 (lower is better)
Translates to: GPAGVVRRERVQ*LWRCRAALREC
Trigger: GCACTCCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS GCA 72 bp TGGCTGGTCCGGCAGGTGTCGTCCGCCGCGAACGGGTaGAGTGCCTGTGGCGGTGCCGTGCAGCCCTCAGGG +
Preference number: 6 (lower is better)
Translates to: WLVRQVSSAANG*SACGGAVQPSG
Trigger: CCCTGAGGGCTGCACGGCACCGCCACAGGCACTGCACCCGTTCGCGGCGGACGACACCTGCCGGACCAGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS CCA 72 bp GGGGGTCCGGGACGGCGGCTCAGACGCGAGTTCCAGTaGGACCCGGGCCTCAGAACTGGGAGACGGCCCGGT +
Preference number: 6 (lower is better)
Translates to: GGPGRRLRREFQ*DPGLRTGRRPG
Trigger: ACCGGGCCGTCTCCCAGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCTGAGCCGCCGTCCCGGACCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS CAA 72 bp CGCGCCCCACCTGCAGGCGGCCAGCCTCACTGCTGCTaGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCG +
Preference number: 6 (lower is better)
Translates to: RAPPAGGQPHCC*QADSRRILLLA
Trigger: CGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCCGCCTGCAGGTGGGGCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS TCA 72 bp GAAGCCGGCGAGGAGCCTGTCAGCTGGGCACAGGCCTaGGACCCCACCAACCGTCCCCGCCTGCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: EAGEEPVSWAQA*DPTNRPRLPSL
Trigger: GAGGCTGGGCAGGCGGGGACGGTTGGTGGGGTCTCAGGCCTGTGCCCAGCTGACAGGCTCCTCGCCGGCTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 72 bp GCTAGGTCCAGCAGGGAGCCACACCTGCGCCTGCAGTaGCCACCCTCGTCCGGCCGAGCCACGTCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: ARSSREPHLRLQ*PPSSGRATSGR
Trigger: CCTGCCAGACGTGGCTCGGCCGGACGAGGGTGGCCACTGCAGGCGCAGGTGTGGCTCCCTGCTGGACCTAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591133.2
CDS TCA 72 bp TGGCTGCCAATGTGGGCCGCCCCTACGCTAAGGCCCTaGGCTCCTCCTCAGGCACTACTGCGGCGCCGGCCG +
Preference number: 6 (lower is better)
Translates to: WLPMWAAPTLRP*APPQALLRRRP
Trigger: CGGCCGGCGCCGCAGTAGTGCCTGAGGAGGAGCTCAGGGCCTTAGCGTAGGGGCGGCCCACATTGGCAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS GCA 72 bp ACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTTGCTaGTGGCAGCAGGCCTTGCGGGCAGGGTTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: TAACRPTAGGSC*WQQALRAGLGA
Trigger: GGCCCCCAACCCTGCCCGCAAGGCCTGCTGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS TCA 72 bp CACACGGCCTTGGGGAGGCCCCGGCGCTGTCCATTGTaGCTGGCCTCCTCTTCTGGGACCTGTCCGGGCACC +
Preference number: 6 (lower is better)
Translates to: HTALGRPRRCPL*LASSSGTCPGT
Trigger: GGTGCCCGGACAGGTCCCAGAAGAGGAGGCCAGTCACAATGGACAGCGCCGGGGCCTCCCCAAGGCCGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
CDS TCA 72 bp TCCGCCTCCCGCGGGCCCCTGGGAGGATGGAGAAGCTaGGGTACAGTCATGGGGCTACCGGACTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SASRGPLGGWRS*GTVMGLPDSWG
Trigger: CCCCCAGGAGTCCGGTAGCCCCATGACTGTACCTCAGCTTCTCCATCCTCCCAGGGGCCCGCGGGAGGCGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 72 bp GGGGGCCCGGCCTCCGCCCTGGATTTGGTGCTCAGCTaGGCCGCCTCTGTGCCGTTCATACACACGGCCTTG +
Preference number: 6 (lower is better)
Translates to: GGPASALDLVLS*AASVPFIHTAL
Trigger: CAAGGCCGTGTGTATGAACGGCACAGAGGCGGCGCAGCTGAGCACCAAATCCAGGGCGGAGGCCGGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS CCA 72 bp TGGACGGCCAGGGCGGTTCCGTTCTCCCAAGGCCACTaGGCAGATGGACGGACGGCCAGTGCCACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: WTARAVPFSQGH*ADGRTASATCC
Trigger: GCAGCAGGTGGCACTGGCCGTCCGTCCATCTGCCCAGTGGCCTTGGGAGAACGGAACCGCCCTGGCCGTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 72 bp GGCCCCGAGACGGCACCCTCCACGGGGATCGCTACGTaGCCAAGCCACCCAAAGGCCACATGGCAACCACGC +
Preference number: 6 (lower is better)
Translates to: GPETAPSTGIAT*PSHPKATWQPR
Trigger: GCGTGGTTGCCATGTGGCCTTTGGGTGGCTTGGCCACGTAGCGATCCCCGTGGAGGGTGCCGTCTCGGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 72 bp CCTCACTGCTGCTTGCAGGCCGACAGCCGGCGGATCTaGCTGCTGGCAGCAGGCCTTGCGGGCAGGGTTGGG +
Preference number: 6 (lower is better)
Translates to: PHCCLQADSRRI*LLAAGLAGRVG
Trigger: CCCAACCCTGCCCGCAAGGCCTGCTGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS CAA 72 bp TGGACACGGGCTGCAGGCGGCCAGCCTCACTGCTGCTaGCAGGCCGACAGCCGGCGGATCTTGCTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: WTRAAGGQPHCC*QADSRRILLLA
Trigger: TGCCAGCAGCAAGATCCGCCGGCTGTCGGCCTGCAAGCAGCAGTGAGGCTGGCCGCCTGCAGCCCGTGTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586243.5
CDS CAA 72 bp AGGGCAGCGTCCGGCACGACTCAGCCTCAGCCATACTaGGCAGCTGGCTCAGAGCCTGCGGCACCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: RAASGTTQPQPY*AAGSEPAAPRQ
Trigger: CTGCCGGGGTGCCGCAGGCTCTGAGCCAGCTGCCAAGTATGGCTGAGGCTGAGTCGTGCCGGACGCTGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 90 bp GCCGCGAACGGGTGCAGTGCCTCGGCCACGCCCAGGTCGGAGATTTaGAGGGTGCCACCGGTGGTGAGCAGCAGGTTCCCCGGCTTGATG +
Preference number: 6 (lower is better)
Translates to: AANGCSASATPRSEI*RVPPVVSSRFPGLM
Trigger: CATCAAGCCGGGGAACCTGCTGCTCACCACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGGCCGAGGCACTGCACCCGTTCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000652231.1
CDS CAA 90 bp GGGAGAGACAGGGCAGCGTCCGGCACGACTCAGCCTCAGCCATACTaGGCAGCTGGCTCAGAGCCTGCGGCACCCCGGCAGAGCCATGGA +
Preference number: 6 (lower is better)
Translates to: GRDRAASGTTQPQPY*AAGSEPAAPRQSHG
Trigger: TCCATGGCTCTGCCGGGGTGCCGCAGGCTCTGAGCCAGCTGCCAAGTATGGCTGAGGCTGAGTCGTGCCGGACGCTGCCCTGTCTCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS TCA 72 bp GTCATCCTCCGGGGACCTCAGGCCCACGGACAAGTATaGACACGGCCGAGCGCAGTCTTCTCCGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: VILRGPQAHGQV*TRPSAVFSGPP
Trigger: GGGCGGCCCGGAGAAGACTGCGCTCGGCCGTGTTCATACTTGTCCGTGGGCCTGAGGTCCCCGGAGGATGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS GCA 72 bp CTCGCTCTTCTGCAAGCCGCGCTCCGCTCTAAGCCCTaGCTCAGACGCCTCCTCGCCACCGGGCACCGTGAA +
Preference number: 6 (lower is better)
Translates to: LALLQAALRSKP*LRRLLATGHRE
Trigger: TTCACGGTGCCCGGTGGCGAGGAGGCGTCTGAGGCAGGGCTTAGAGCGGAGCGCGGCTTGCAGAAGAGCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS CAA 72 bp GGGTGCAGTGCCTCGGCCACGCCCAGGTCGGAGATTTaGAGGGTGCCACCGGTGGTGAGCAGCAGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: GCSASATPRSEI*RVPPVVSSRFP
Trigger: GGGGAACCTGCTGCTCACCACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGGCCGAGGCACTGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000652231.1
CDS TCA 72 bp GGCAACCACGCGCAGCCACGTGACGGTCACCATGACTaGCTAGCGCGGGCTATGCTCACGGCTGGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: GNHAQPRDGHHD*LARAMLTAGCG
Trigger: GCCACAGCCAGCCGTGAGCATAGCCCGCGCTAGTCAGTCATGGTGACCGTCACGTGGCTGCGCGTGGTTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 72 bp ACCGACATCAGCTCGCCCTCCGTGAACATGCCCAGCTaGTGCGGGTCCACCACCTCCATGCTGGACCCAGGG +
Preference number: 6 (lower is better)
Translates to: TDISSPSVNMPS*CGSTTSMLDPG
Trigger: CCCTGGGTCCAGCATGGAGGTGGTGGACCCGCAGCAGCTGGGCATGTTCACGGAGGGCGAGCTGATGTCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS GCA 72 bp CGCCGTGCAGGTCCTCCAAGTACGGCACCACAGTCATaGTGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTG +
Preference number: 6 (lower is better)
Translates to: RRAGPPSTAPQS*CATGPWCLGSV
Trigger: CACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCACGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp CAGACGCGAGTTCCAGTGGGACCCGGGCCTCAGAACTaGGAGACGGCCCGGTCAGGGTCAACTTCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: QTRVPVGPGPQN*ETARSGSTSSS
Trigger: CGAGGACGAAGTTGACCCTGACCGGGCCGTCTCCCAGTTCTGAGGCCCGGGTCCCACTGGAACTCGCGTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1
CDS CCA 72 bp CACCACAGTCATGCTGCGCCACCGGTCCTTGGTGTCTaGGCTCGGTGGGATGGGCACTGGTGCTTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: HHSHAAPPVLGV*ARWDGHWCFSR
Trigger: CCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp CAGGGCGGTTCCGTTCTCCCAAGGCCACTGGGCAGATaGACGGACGGCCAGTGCCACCTGCTGCCATGCGTA +
Preference number: 6 (lower is better)
Translates to: QGGSVLPRPLGR*TDGQCHLLPCV
Trigger: TACGCATGGCAGCAGGTGGCACTGGCCGTCCGTCCATCTGCCCAGTGGCCTTGGGAGAACGGAACCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 72 bp CACGTGCCTACCTCGGCCACGCCCAGGTCGGAGATTTaGAGGGTGCCACCGGTGGTGAGCAGCAGGTTCCCC +
Preference number: 6 (lower is better)
Translates to: HVPTSATPRSEI*RVPPVVSSRFP
Trigger: GGGGAACCTGCTGCTCACCACCGGTGGCACCCTCAAAATCTCCGACCTGGGCGTGGCCGAGGTAGGCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586358.5
ENST00000591133.2
CDS GCA 72 bp CGTGCAGGTCCTCCAAGTACGGCACCACAGTCATGCTaGGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGA +
Preference number: 6 (lower is better)
Translates to: RAGPPSTAPQSC*ATGPWCLGSVG
Trigger: TCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS GCA 72 bp GGTACTCCAGGCCGTCAATCAGCTGACAGAAGTACCTaGGGGCAGCACACACCCGTCCTGGGGCCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: GTPGRQSADRST*GQHTPVLGPRP
Trigger: AGGCCTCGGCCCCAGGACGGGTGTGTGCTGCCCGCAGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591133.2
CDS CAA 72 bp ATGTCCACCTTGAAGCCGGAGAAGGTGTCCAGGCCGTaGGCAATCTCGGGCGGCTGGAAAGCCGGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: MSTLKPEKVSRP*AISGGWKAGEP
Trigger: GGGCTCCCCGGCTTTCCAGCCGCCCGAGATTGCCAACGGCCTGGACACCTTCTCCGGCTTCAAGGTGGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CAA 90 bp AGGTCCTCCAAGTACGGCACCACAGTCATGCTGCGCCACCGGTCCTaGGTGTCTGGGCTCGGTGGGATGGGCACTGGTGCTTCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: RSSKYGTTVMLRHRS*VSGLGGMGTGASAG
Trigger: TCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTTGGAGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CAA 90 bp GGAAGGCCACCCTTGAGTCACTCCCGGGGTACATTGTGTGGCCTTTaGCAGTGGGGCCTGGCGGGCTCTGACGCTGGTGGATGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: GRPPLSHSRGTLCGL*QWGLAGSDAGGWAV
Trigger: CACAGCCCATCCACCAGCGTCAGAGCCCGCCAGGCCCCACTGCAAAAGGCCACACAATGTACCCCGGGAGTGACTCAAGGGTGGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS TCA 72 bp CACCCACCACCCACTGGTGCTCAAAAGCCTCTGGGCTaGGCCCAGCATAAGCCTTTCCTGGAAGCGGCGCGG +
Preference number: 6 (lower is better)
Translates to: HPPPTGAQKPLG*AQHKPFLEAAR
Trigger: CCGCGCCGCTTCCAGGAAAGGCTTATGCTGGGCTCAGCCCAGAGGCTTTTGAGCACCAGTGGGTGGTGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS TCA 72 bp ATTGTGTGGCCTTTTGCAGTGGGGCCTGGCGGGCTCTaGCGCTGGTGGATGGGCTGTGGGCACCCATTTGGG +
Preference number: 6 (lower is better)
Translates to: IVWPFAVGPGGL*RWWMGCGHPFG
Trigger: CCCAAATGGGTGCCCACAGCCCATCCACCAGCGTCAGAGCCCGCCAGGCCCCACTGCAAAAGGCCACACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 72 bp GGACGGCCAGTGCCACCTGCTGCCATGCGTAGGAAGTaGAGCAGGACAACCCTGACAGACCCTGCAAGCCAG +
Preference number: 6 (lower is better)
Translates to: GRPVPPAAMRRK*SRTTLTDPASQ
Trigger: CTGGCTTGCAGGGTCTGTCAGGGTTGTCCTGCTGCACTTCCTACGCATGGCAGCAGGTGGCACTGGCCGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 72 bp TGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTGGGATaGGCACTGGTGCTTCAGCCGGAGGATGTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: CATGPWCLGSVG*ALVLQPEDVSS
Trigger: GGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp CATGCTGCGCCACCGGTCCTTGGTGTCTGGGCTCGGTaGGATGGGCACTGGTGCTTCAGCCGGAGGATGTTT +
Preference number: 6 (lower is better)
Translates to: HAAPPVLGVWAR*DGHWCFSRRMF
Trigger: AAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp AGTACGGCACCACAGTCATGCTGCGCCACCGGTCCTTaGTGTCTGGGCTCGGTGGGATGGGCACTGGTGCTT +
Preference number: 6 (lower is better)
Translates to: STAPQSCCATGP*CLGSVGWALVL
Trigger: AAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp TTGCAGTGGGGCCTGGCGGGCTCTGACGCTGGTGGATaGGCTGTGGGCACCCATTTGGGGGACAGACATGTA +
Preference number: 6 (lower is better)
Translates to: LQWGLAGSDAGG*AVGTHLGDRHV
Trigger: TACATGTCTGTCCCCCAAATGGGTGCCCACAGCCCATCCACCAGCGTCAGAGCCCGCCAGGCCCCACTGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 72 bp AGTCACTCCCGGGGTACATTGTGTGGCCTTTTGCAGTaGGGCCTGGCGGGCTCTGACGCTGGTGGATGGGCT +
Preference number: 6 (lower is better)
Translates to: SHSRGTLCGLLQ*GLAGSDAGGWA
Trigger: AGCCCATCCACCAGCGTCAGAGCCCGCCAGGCCCCACTGCAAAAGGCCACACAATGTACCCCGGGAGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 72 bp AAGTACGGCACCACAGTCATGCTGCGCCACCGGTCCTaGGTGTCTGGGCTCGGTGGGATGGGCACTGGTGCT +
Preference number: 6 (lower is better)
Translates to: KYGTTVMLRHRS*VSGLGGMGTGA
Trigger: AGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGGTGGCGCAGCATGACTGTGGTGCCGTACTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CAA 72 bp CCCTTGAGTCACTCCCGGGGTACATTGTGTGGCCTTTaGCAGTGGGGCCTGGCGGGCTCTGACGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: PLSHSRGTLCGL*QWGLAGSDAGG
Trigger: TCCACCAGCGTCAGAGCCCGCCAGGCCCCACTGCAAAAGGCCACACAATGTACCCCGGGAGTGACTCAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 90 bp TTCCGGAACCAGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGCATCCCTGAGGAGAAGCCGGCGAGG +
Preference number: 6 (lower is better)
Translates to: FRNQLCCRICRMENL*AGSYSSIPEEKPAR
Trigger: CCTCGCCGGCTTCTCCTCAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS GCA 72 bp TGCACAGCGTCTCCGAGTCCAGCACCTCCTTCACCTTaGCGTAAGAGCCTTCCCCCAGCAGGTCCCCCATCA +
Preference number: 6 (lower is better)
Translates to: CTASPSPAPPSP*RKSLPPAGPPS
Trigger: TGATGGGGGACCTGCTGGGGGAAGGCTCTTACGGCAAGGTGAAGGAGGTGCTGGACTCGGAGACGCTGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS GCA 72 bp TCGATGTCGAAGAGGTCCTCGTCCTCGTCCGCGCCGTaGAGGTCCTCCAAGTACGGCACCACAGTCATGCTG +
Preference number: 6 (lower is better)
Translates to: SMSKRSSSSSAP*RSSKYGTTVML
Trigger: CAGCATGACTGTGGTGCCGTACTTGGAGGACCTGCACGGCGCGGACGAGGACGAGGACCTCTTCGACATCGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000652231.1
CDS GCA 72 bp GCTTCCTCTCCTGAAAGGTCTGAGCCCTCGCTCTTCTaGAAGCCGCGCTCCGCTCTAAGCCCTGCCTCAGAC +
Preference number: 6 (lower is better)
Translates to: ASSPERSEPSLF*KPRSALSPASD
Trigger: GTCTGAGGCAGGGCTTAGAGCGGAGCGCGGCTTGCAGAAGAGCGAGGGCTCAGACCTTTCAGGAGAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585465.2
ENST00000652231.1
CDS CCA 72 bp CCGGTCCTTGGTGTCTGGGCTCGGTGGGATGGGCACTaGTGCTTCAGCCGGAGGATGTTTCTTCCGGAACCA +
Preference number: 6 (lower is better)
Translates to: PVLGVWARWDGH*CFSRRMFLPEP
Trigger: TGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp CCAACCCTACATTTCTGCACAAAAGCCCCGCCTCCCTaGGGCTGCGGGCAGAGGGATGAGGCTCCCACCTTT +
Preference number: 6 (lower is better)
Translates to: PTLHFCTKAPPP*GCGQRDEAPTF
Trigger: AAAGGTGGGAGCCTCATCCCTCTGCCCGCAGCCCCAGGGAGGCGGGGCTTTTGTGCAGAAATGTAGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CCA 72 bp CCCACCACCCACCACCCACTGGTGCTCAAAAGCCTCTaGGCTGAGCCCAGCATAAGCCTTTCCTGGAAGCGG +
Preference number: 6 (lower is better)
Translates to: PTTHHPLVLKSL*AEPSISLSWKR
Trigger: CCGCTTCCAGGAAAGGCTTATGCTGGGCTCAGCCCAGAGGCTTTTGAGCACCAGTGGGTGGTGGGTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS TCA 72 bp CCCTGGCTATGCAGGTACTCCAGGCCGTCAATCAGCTaGCAGAAGTACCTGCGGGCAGCACACACCCGTCCT +
Preference number: 6 (lower is better)
Translates to: PWLCRYSRPSIS*QKYLRAAHTRP
Trigger: AGGACGGGTGTGTGCTGCCCGCAGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591133.2
CDS GCA 72 bp GTCCTTGGTGTCTGGGCTCGGTGGGATGGGCACTGGTaGTTCAGCCGGAGGATGTTTCTTCCGGAACCAGCT +
Preference number: 6 (lower is better)
Translates to: VLGVWARWDGHW*FSRRMFLPEPA
Trigger: AGCTGGTTCCGGAAGAAACATCCTCCGGCTGAAGCACCAGTGCCCATCCCACCGAGCCCAGACACCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CAA 90 bp GCCTCCCCGTTGGGGATCCTTCGCAACTTCTTCTTCTTGAGGATCTaGACGGCCCTCCTGCACAGCGTCTCCGAGTCCAGCACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ASPLGILRNFFFLRI*TALLHSVSESSTSF
Trigger: GAAGGAGGTGCTGGACTCGGAGACGCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS TCA 72 bp CCCTGGCTATGCAGGTACTCCAGGCCGTCAATCAGCTaGCAGAAGTACCCGTGGGCCTGGCACACTGGGAAA +
Preference number: 6 (lower is better)
Translates to: PWLCRYSRPSIS*QKYPWAWHTGK
Trigger: TTTCCCAGTGTGCCAGGCCCACGGGTACTTCTGTCAGCTGATTGACGGCCTGGAGTACCTGCATAGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000652231.1
CDS CCA 72 bp TCTTCCGGAACCAGCTGTGCTGCCGGATCTGCCGGATaGAGAACCTCTTGGCCGGTTCGTACTCAAGCATCC +
Preference number: 6 (lower is better)
Translates to: SSGTSCAAGSAG*RTSWPVRTQAS
Trigger: GGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp AGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCATCCCTGAGGAGAAGC +
Preference number: 6 (lower is better)
Translates to: SCAAGSAGWRTS*PVRTQASLRRS
Trigger: GCTTCTCCTCAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 72 bp GCCTCCCCGTTGGGGATCCTTCGCAACTTCTTCTTCTaGAGGATCTTGACGGCCCTCCTGCACAGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: ASPLGILRNFFF*RILTALLHSVS
Trigger: GGAGACGCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS CAA 72 bp CAGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGCATCCCTTTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: QLCCRICRMENL*AGSYSSIPFSR
Trigger: CCTGCTGAAAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000591133.2
ENST00000652231.1
CDS CAA 72 bp CAGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGCATCCCTGAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: QLCCRICRMENL*AGSYSSIPEEK
Trigger: CTTCTCCTCAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589152.5
CDS CAA 90 bp TTCACGTTGGCCTCCCCGTTGGGGATCCTTCGCAACTTCTTCTTCTaGAGGATCTTGACGGCCCTCCTGCACAGCGTCTCCGAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: FTLASPLGILRNFFF*RILTALLHSVSESS
Trigger: GCTGGACTCGGAGACGCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS CAA 90 bp TTCCGGAACCAGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTaGGCCGGTTCGTACTCAAGCATCCCTTTCAGCAGGTCAGAGAGC +
Preference number: 6 (lower is better)
Translates to: FRNQLCCRICRMENL*AGSYSSIPFSRSES
Trigger: GCTCTCTGACCTGCTGAAAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000591133.2
ENST00000652231.1
CDS GCA 72 bp GGATGTTTCTTCCGGAACCAGCTGTGCTGCCGGATCTaGCGGATGGAGAACCTCTTGGCCGGTTCGTACTCA +
Preference number: 6 (lower is better)
Translates to: GCFFRNQLCCRI*RMENLLAGSYS
Trigger: TGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCTGGTTCCGGAAGAAACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000589152.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp AGCTGTGCTGCCGGATCTGCCGGATGGAGAACCTCTTaGCCGGTTCGTACTCAAGCATCCCTTTCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SCAAGSAGWRTS*PVRTQASLSAG
Trigger: ACCTGCTGAAAGGGATGCTTGAGTACGAACCGGCCAAGAGGTTCTCCATCCGGCAGATCCGGCAGCACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000591133.2
ENST00000652231.1
CDS CCA 72 bp CATTTAGGAGGACCTTGTGGTTTCCCGAGGTGGATGTaGCAGAGATCGAGCCCACGCCTCTTCCTAGCTCAC +
Preference number: 6 (lower is better)
Translates to: HLGGPCGFPRWM*QRSSPRLFLAH
Trigger: GTGAGCTAGGAAGAGGCGTGGGCTCGATCTCTGCCACATCCACCTCGGGAAACCACAAGGTCCTCCTAAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585748.2
CDS CAA 72 bp TTGGGGATCCTTCGCAACTTCTTCTTCTTGAGGATCTaGACGGCCCTCCTGCACAGCGTCTCCGAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LGILRNFFFLRI*TALLHSVSESS
Trigger: GCTGGACTCGGAGACGCTGTGCAGGAGGGCCGTCAAGATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000326873.12
ENST00000585851.1
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000593219.5
ENST00000652231.1
CDS GCA 72 bp GGGAAACGCTTCTCCGGCACGCTGTCCAGCATTTCCTaGATGCCACACACGCAGTACTCCATCACCATATAC +
Preference number: 6 (lower is better)
Translates to: GKRFSGTLSSIS*MPHTQYSITIY
Trigger: GTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGCGTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000652231.1
CDS CCA 72 bp GGAAGTGGATTCAGAGTGGCCAGGAGTTCTTCACGTTaGCCTCCCCGTTGGGGATCCTTCGCAACTTCTTCT +
Preference number: 6 (lower is better)
Translates to: GSGFRVARSSSR*PPRWGSFATSS
Trigger: AGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGTGAAGAACTCCTGGCCACTCTGAATCCACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS CCA 72 bp GGAAGACATTTAGGAGGACCTTGTGGTTTCCCGAGGTaGATGTGGCAGAGATCGAGCCCACGCCTCTTCCTA +
Preference number: 6 (lower is better)
Translates to: GRHLGGPCGFPR*MWQRSSPRLFL
Trigger: TAGGAAGAGGCGTGGGCTCGATCTCTGCCACATCCACCTCGGGAAACCACAAGGTCCTCCTAAATGTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585748.2
CDS CAA 72 bp CCGCCAGCCCTGAGTCCGCGGGTGAGCGGTCCTTCCTaGTGTTCCGACTTCCCTTCTCCAAAATTTTACAAA +
Preference number: 6 (lower is better)
Translates to: PPALSPRVSGPS*CSDFPSPKFYK
Trigger: TTTGTAAAATTTTGGAGAAGGGAAGTCGGAACACAAGGAAGGACCGCTCACCCGCGGACTCAGGGCTGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000593219.5
ENST00000652231.1
CDS CAA 72 bp CAGAGTGGCCAGGAGTTCTTCACGTTGGCCTCCCCGTaGGGGATCCTTCGCAACTTCTTCTTCTTGAGGATC +
Preference number: 6 (lower is better)
Translates to: QSGQEFFTLASP*GILRNFFFLRI
Trigger: GATCCTCAAGAAGAAGAAGTTGCGAAGGATCCCCAACGGGGAGGCCAACGTGAAGAACTCCTGGCCACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593219.5
CDS TCA 72 bp TCCACCACCACTTTACCGACGAGACCCCAGCGGCTCTaGGATGTCCCTGAATCCTTGCCTACAGTTGAATTT +
Preference number: 6 (lower is better)
Translates to: STTTLPTRPQRL*DVPESLPTVEF
Trigger: AAATTCAACTGTAGGCAAGGATTCAGGGACATCTCAGAGCCGCTGGGGTCTCGTCGGTAAAGTGGTGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585748.2
CDS GCA 72 bp AACGCTTCTCCGGCACGCTGTCCAGCATTTCCTGCATaGCACACACGCAGTACTCCATCACCATATACATTT +
Preference number: 6 (lower is better)
Translates to: NASPARCPAFPA*HTRSTPSPYTF
Trigger: AAATGTATATGGTGATGGAGTACTGCGTGTGTGGCATGCAGGAAATGCTGGACAGCGTGCCGGAGAAGCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000586358.5
ENST00000589152.5
ENST00000652231.1
CDS GCA 72 bp CACTTGGTGACCTCAGGGCAGCTTCTGAACAGTTCGTaGCTCAGTTTCCTCCCTCGTGAAATGCAGGTAATA +
Preference number: 6 (lower is better)
Translates to: HLVTSGQLLNSS*LSFLPREMQVI
Trigger: TATTACCTGCATTTCACGAGGGAGGAAACTGAGGCACGAACTGTTCAGAAGCTGCCCTGAGGTCACCAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585748.2
CDS CAA 72 bp AAAGGAAGGGAAAAACCCTTCTTCCAACAGAAACGATaGTTCTACACGTCAGTCCCGGCTGCGAGTCCAAGC +
Preference number: 6 (lower is better)
Translates to: KGREKPFFQQKR*FYTSVPAASPS
Trigger: GCTTGGACTCGCAGCCGGGACTGACGTGTAGAACAATCGTTTCTGTTGGAAGAAGGGTTTTTCCCTTCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326873.12
ENST00000586243.5
ENST00000652231.1