RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STK10 (Homo sapiens)

Ensembl gene IDs: ENSG00000072786

Ensembl transcript IDs: ENST00000176763.10, ENST00000517360.1, ENST00000517381.1, ENST00000517524.5, ENST00000517527.1, ENST00000517775.1, ENST00000518267.5, ENST00000519269.1, ENST00000519441.5, ENST00000519710.1, ENST00000520476.1, ENST00000521322.1, ENST00000522879.1, ENST00000522936.5, ENST00000523603.1, ENST00000523615.1

Found 568 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCTGCACACAGGAGCCTGTGCGGGGGCCAGCACGCATCGCAGCCTaGCAGTACAGCCTGTGCTTTTCCATGCCTCCGGTGCCAACACCC +
Preference number: 1 (lower is better)
Translates to: PCTQEPVRGPARIAA*QYSLCFSMPPVPTP
Trigger: GGGTGTTGGCACCGGAGGCATGGAAAAGCACAGGCTGTACTGCCAGGCTGCGATGCGTGCTGGCCCCCGCACAGGCTCCTGTGTGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp GCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGATaGGCATTGCACGGTGGCTCCACGGTGAGGCTAGGTGACCCCGCC +
Preference number: 1 (lower is better)
Translates to: ALTQGTRNTAWASQR*ALHGGSTVRLGDPA
Trigger: GGCGGGGTCACCTAGCCTCACCGTGGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 90 bp GCCAGAGTGCTATGGAGCAGACTGGGTTGTGGAAGCCTCGTGTGCTaGGGAATCAGTCCCTGCACACAGGAGCCTGTGCGGGGGCCAGCA +
Preference number: 1 (lower is better)
Translates to: ARVLWSRLGCGSLVC*GISPCTQEPVRGPA
Trigger: TGCTGGCCCCCGCACAGGCTCCTGTGTGCAGGGACTGATTCCTCAGCACACGAGGCTTCCACAACCCAGTCTGCTCCATAGCACTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 90 bp GCATCGCAGCCTGGCAGTACAGCCTGTGCTTTTCCATGCCTCCGGTaGCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATG +
Preference number: 1 (lower is better)
Translates to: ASQPGSTACAFPCLR*QHPARATPTAPPNM
Trigger: CATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACCGGAGGCATGGAAAAGCACAGGCTGTACTGCCAGGCTGCGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp TGCTCAGTGGCACAGGCTCAGGCAGCAAACGTGTTCCAACCCACCTaGGCAGAAGAGGCCAGGCCAGCAGACCAAGTCCTGTGTGTACGC +
Preference number: 1 (lower is better)
Translates to: CSVAQAQAANVFQPT*AEEARPADQVLCVR
Trigger: GCGTACACACAGGACTTGGTCTGCTGGCCTGGCCTCTTCTGCCCAGGTGGGTTGGAACACGTTTGCTGCCTGAGCCTGTGCCACTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp CCTGCAGACAGGGTGGGCCAGAGTGCTATGGAGCAGACTGGGTTGTaGAAGCCTCGTGTGCTGAGGAATCAGTCCCTGCACACAGGAGCC +
Preference number: 1 (lower is better)
Translates to: PADRVGQSAMEQTGL*KPRVLRNQSLHTGA
Trigger: GGCTCCTGTGTGCAGGGACTGATTCCTCAGCACACGAGGCTTCCACAACCCAGTCTGCTCCATAGCACTCTGGCCCACCCTGTCTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 90 bp CAGGAGAGGACTCGAGGCCACAGAACACCCATTCCTCTTGGACCCTaGCCCCACCAACAGCCCCATCCCTTCCAGCTTGAAGGGATCTGG +
Preference number: 1 (lower is better)
Translates to: QERTRGHRTPIPLGP*PHQQPHPFQLEGIW
Trigger: CCAGATCCCTTCAAGCTGGAAGGGATGGGGCTGTTGGTGGGGTCAGGGTCCAAGAGGAATGGGTGTTCTGTGGCCTCGAGTCCTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 90 bp GGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTaGTATGGAGCAGACTGGGTTGTGGAAGCCTCGTGTGCTGAGGAA +
Preference number: 1 (lower is better)
Translates to: GKQPSCFTCRQGGPE*YGADWVVEASCAEE
Trigger: TTCCTCAGCACACGAGGCTTCCACAACCCAGTCTGCTCCATAGCACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp TGTTTCACCTGCAGACAGGGTGGGCCAGAGTGCTATGGAGCAGACTaGGTTGTGGAAGCCTCGTGTGCTGAGGAATCAGTCCCTGCACAC +
Preference number: 1 (lower is better)
Translates to: CFTCRQGGPECYGAD*VVEASCAEESVPAH
Trigger: GTGTGCAGGGACTGATTCCTCAGCACACGAGGCTTCCACAACCCAGTCTGCTCCATAGCACTCTGGCCCACCCTGTCTGCAGGTGAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp AGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTaGCCTGGTAGAACTGGGTCTATGTTCTGCAGTTACACTGCCGCT +
Preference number: 1 (lower is better)
Translates to: SKAQSSPVWWFPTLA*PGRTGSMFCSYTAA
Trigger: AGCGGCAGTGTAACTGCAGAACATAGACCCAGTTCTACCAGGCCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp TCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTaGGCCTCTCAGAGATGGGCATTGCACGGTGGCTCCACGGTGAGG +
Preference number: 1 (lower is better)
Translates to: SLIQKALTQGTRNTA*ASQRWALHGGSTVR
Trigger: CCTCACCGTGGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 90 bp TGGTTCCCAACGCTGGCCTGGCCTGGTAGAACTGGGTCTATGTTCTaGAGTTACACTGCCGCTAGTTCATGTTTCCCCAGCACCAATGCA +
Preference number: 1 (lower is better)
Translates to: WFPTLAWPGRTGSMF*SYTAASSCFPSTNA
Trigger: TGCATTGGTGCTGGGGAAACATGAACTAGCGGCAGTGTAACTGCAGAACATAGACCCAGTTCTACCAGGCCAGGCCAGCGTTGGGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp ACACATGGAAATACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTaGTTCCCAACGCTGGCCTGGCCTGGTAGAACTGGGTCTATGTTC +
Preference number: 1 (lower is better)
Translates to: THGNTVSKAQSSPVW*FPTLAWPGRTGSMF
Trigger: GAACATAGACCCAGTTCTACCAGGCCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGTATTTCCATGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 90 bp GCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATGATTGAGTaGCTCTGCAGGGAATGGCTGAAAAACCAAGAATTCCAGCCCGGA +
Preference number: 1 (lower is better)
Translates to: APLGTEMAVRDLMIE*LCREWLKNQEFQPG
Trigger: TCCGGGCTGGAATTCTTGGTTTTTCAGCCATTCCCTGCAGAGTCACTCAATCATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 90 bp CCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATGATTaGGTGACTCTGCAGGGAATGGCTGAAAAACCAAGAATTCCAGCC +
Preference number: 1 (lower is better)
Translates to: PGSSGNRNGCEGLDD*VTLQGMAEKPRIPA
Trigger: GGCTGGAATTCTTGGTTTTTCAGCCATTCCCTGCAGAGTCACTCAATCATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 90 bp AAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATaGAAATACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTT +
Preference number: 1 (lower is better)
Translates to: KLAFHLILSHTPGYT*KYCKQSPKQPCLVV
Trigger: AACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGTATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 90 bp ATTGCTTTAGAAAGACAGAGTATACAGAACCTTAACCTAGCTGGGTaGAGTAGCATGTATCTGTCGTCCCAGCTACTCAAGGTTGAAGCG +
Preference number: 1 (lower is better)
Translates to: IALERQSIQNLNLAG*SSMYLSSQLLKVEA
Trigger: CGCTTCAACCTTGAGTAGCTGGGACGACAGATACATGCTACTGCACCCAGCTAGGTTAAGGTTCTGTATACTCTGTCTTTCTAAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 90 bp GTCTCAACCACTCTACCACCAGCGAAACACTACCCAGACTCAATATaGCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTTGTTGT +
Preference number: 1 (lower is better)
Translates to: VSTTLPPAKHYPDSI*PHDYSKSLPVLCCC
Trigger: ACAACAACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTAGTGTTTCGCTGGTGGTAGAGTGGTTGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 90 bp CACTCTACCACCAGCGAAACACTACCCAGACTCAATATGCCCGCATaGTTACTCCAAATCATTACCAGTTTTGTGTTGTTGTTCTTGTTT +
Preference number: 1 (lower is better)
Translates to: HSTTSETLPRLNMPA*LLQIITSFVLLFLF
Trigger: AAACAAGAACAACAACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTAGTGTTTCGCTGGTGGTAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CAA 90 bp ACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGATGGGCATaGCACGGTGGCTCCACGGTGAGGCTAGGTGACCCCGCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: TQGTRNTAWASQRWA*HGGSTVRLGDPASP
Trigger: GGGACTGGCGGGGTCACCTAGCCTCACCGTGGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGCAGAACCTGTGCTTCTaGCATGTTCCTGGGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKQNLCF*HVPGAG
Trigger: CCCTGCCCCAGGAACATGGCAGAAGCACAGGTTCTG...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTGCATTCACACCCATGTaGAGGAAGGGGGACGCGAGA +
Preference number: 2 (lower is better)
Translates to: GAEANSPPVSPADRVGQSAFTPM*RKGDAR
Trigger: TCTCGCGTCCCCCTTCCTGCACATGGGTGTGAATGC...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGCCCTCCTGTTTCACCTaGAGACAGGGTGGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWPSCFT*RQGGPE
Trigger: CTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGG...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGTCTATCAGGCACAGTTaGGGTGGCACAGGGCGAGGG +
Preference number: 2 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWSIRHS*GGTGRG
Trigger: CCCTCGCCCTGTGCCACCCCAACTGTGCCTGATAGA...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTAAGGGGGACGCGAGATaGCATGAAACACGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: GAEANSPPVSPADRVGQSKGDAR*HETREK
Trigger: CTTCTCCCGTGTTTCATGCCATCTCGCGTCCCCCTT...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGAATTCCAGCCCGGATaGGCCCACGGGGACTTCATC +
Preference number: 2 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEEFQPG*AHGDFI
Trigger: GATGAAGTCCCCGTGGGCTCATCCGGGCTGGAATTC...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGCCAACACCCCGCACGTaGCACACCAACTGCTCCACC +
Preference number: 2 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVPTPRT*HTNCST
Trigger: GGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGG...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGAGGGAAAAGGGGTCCTaGGTTACATGTTCACAGAGA +
Preference number: 2 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVREKGS*VTCSQR
Trigger: TCTCTGTGAACATGTAACTCAGGACCCCTTTTCCCT...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATTCTGCAGGGAATGGCTaGAAAACCAAGAATTCCAGC +
Preference number: 2 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDSAGNG*KTKNSS
Trigger: GCTGGAATTCTTGGTTTTTCAGCCATTCCCTGCAGA...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGGGACGCGAGATGGCATaGAACACGGGAGAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: LIQKALTQGTRNTAWASQGREMA*NTGEAE
Trigger: TTCTGCTTCTCCCGTGTTTCATGCCATCTCGCGTCC...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGCAGCAGGAGTCCATCTaGGGTACAGAACCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: LIQKALTQGTRNTAWASQQQESI*GTEPVL
Trigger: AAGCACAGGTTCTGTACCTCAGATGGACTCCTGCTG...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGAGGTACAGAACCTGTaGTTCTGCCATGTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEEVQNL*FCHVPG
Trigger: CCCAGGAACATGGCAGAAGCACAGGTTCTGTACCTC...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGAAGTGGAAAGCAAACTaGGAGAACAGGAGGAATGAG +
Preference number: 2 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQKWKAN*ENRRNE
Trigger: CTCATTCCTCCTGTTCTCCCAGTTTGCTTTCCACTT...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGAGAAGTCCAACAGACTaGCAGCCCAGGTCTGAAATG +
Preference number: 2 (lower is better)
Translates to: YTESTNTGHEEYRVGLSERSPTD*QPRSEM
Trigger: CATTTCAGACCTGGGCTGGCAGTCTGTTGGACTTCT...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGCACAGAGAGCAAAACTaGTATTTTCGCAAACAGGAG +
Preference number: 2 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQHREQN*YFRKQE
Trigger: CTCCTGTTTGCGAAAATACCAGTTTTGCTCTCTGTG...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGTACGCGTATGTGTGTaGATTCACACCCATGTGCAG +
Preference number: 2 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVVRVCV*IHTHVQ
Trigger: CTGCACATGGGTGTGAATGCACACACATACGCGTAC...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATATTTCCATGCCTCCGGTaGCAACACCCCGCACGTGCC +
Preference number: 2 (lower is better)
Translates to: ETGISPNTFSHARLHMEIFPCLR*QHPARA
Trigger: GGCACGTGCGGGGTGTTGGCACCGGAGGCATGGAAA...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGACATGTTCACAGAGAATaGAGGAGAAGGCCCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RYIHSAAVESESGGSQLRHVHRE*RRRPWG
Trigger: GCCCCAGGGCCTTCTCCTTCATTCTCTGTGAACATG...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGCTCAATATGCCCGCATaGTTACTCCAAATCATTACC +
Preference number: 2 (lower is better)
Translates to: LIQKALTQGTRNTAWASQLNMPA*LLQIIT
Trigger: GGTAATGATTTGGAGTAATCATGCGGGCATATTGAG...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGTACCCAGACTCAATATaGCCGCATGATTACTCCAAA +
Preference number: 2 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEYPDSI*PHDYSK
Trigger: TTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGAGACTTGATGATTGAGTaGCTCTGCAGGGAATGGCTG +
Preference number: 2 (lower is better)
Translates to: RYIHSAAVESESGGSQLRDLMIE*LCREWL
Trigger: CAGCCATTCCCTGCAGAGTCACTCAATCATCAAGTC...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR GCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATAACTGGGTCTATGTTCTaGAGTTACACTGCCGCTAGT +
Preference number: 2 (lower is better)
Translates to: ETGISPNTFSHARLHMEITGSMF*SYTAAS
Trigger: ACTAGCGGCAGTGTAACTGCAGAACATAGACCCAGT...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTCAGCTTGAAGGGATCTaGGGCTCAAGGAGAATATAC +
Preference number: 2 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCQLEGI*GSRRIY
Trigger: GTATATTCTCCTTGAGCCCCAGATCCCTTCAAGCTG...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTAACACCCATTCCTCTTaGACCCTGACCCCACCAACA +
Preference number: 2 (lower is better)
Translates to: RILVQTFAFIALYTFCSCNTHSS*TLTPPT
Trigger: TGTTGGTGGGGTCAGGGTCCAAGAGGAATGGGTGTT...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATAGATGCTTTTTCTTCCTaGAGAGAAGTCCAACAGACT +
Preference number: 2 (lower is better)
Translates to: ETGISPNTFSHARLHMEIDAFSS*REVQQT
Trigger: AGTCTGTTGGACTTCTCTTCAGGAAGAAAAAGCATC...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR TCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTTACATTAGGTTCAGGTaGCAAATAATTACACCTCAC +
Preference number: 2 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCYIRFR*QIITPH
Trigger: GTGAGGTGTAATTATTTGTCACCTGAACCTAATGTA...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 72 bp GGGCCAGCACGCATCGCAGCCTGGCAGTACAGCCTGTaGTTTTCCATGCCTCCGGTGCCAACACCCCGCACG +
Preference number: 3 (lower is better)
Translates to: GPARIAAWQYSL*FSMPPVPTPRT
Trigger: CGTGCGGGGTGTTGGCACCGGAGGCATGGAAAAGCACAGGCTGTACTGCCAGGCTGCGATGCGTGCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp CAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGATaGGCATTGCACGGTGGCTCCACGGTGAGGCTAGGT +
Preference number: 3 (lower is better)
Translates to: QGTRNTAWASQR*ALHGGSTVRLG
Trigger: ACCTAGCCTCACCGTGGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp GCACAGGCTCAGGCAGCAAACGTGTTCCAACCCACCTaGGCAGAAGAGGCCAGGCCAGCAGACCAAGTCCTG +
Preference number: 3 (lower is better)
Translates to: AQAQAANVFQPT*AEEARPADQVL
Trigger: CAGGACTTGGTCTGCTGGCCTGGCCTCTTCTGCCCAGGTGGGTTGGAACACGTTTGCTGCCTGAGCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp AGGGTGGGCCAGAGTGCTATGGAGCAGACTGGGTTGTaGAAGCCTCGTGTGCTGAGGAATCAGTCCCTGCAC +
Preference number: 3 (lower is better)
Translates to: RVGQSAMEQTGL*KPRVLRNQSLH
Trigger: GTGCAGGGACTGATTCCTCAGCACACGAGGCTTCCACAACCCAGTCTGCTCCATAGCACTCTGGCCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp CAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTaGGCCTCTCAGAGATGGGCATTGCACGGTGGCTCC +
Preference number: 3 (lower is better)
Translates to: QKALTQGTRNTA*ASQRWALHGGS
Trigger: GGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CAA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGCAGGGTTTTGCCATGTaGGCCAGGCTAGTCTCGAAC +
Preference number: 3 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWQGFAM*ARLVSN
Trigger: GTTCGAGACTAGCCTGGCCAACATGGCAAAACCCTG...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 72 bp CCAACTGAGACCCCGAAGGCCCAGCAGGAGTCCATCTaGGGTACAGAACCTGTGCTTCTGCCATGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: PTETPKAQQESI*GTEPVLLPCSW
Trigger: CCAGGAACATGGCAGAAGCACAGGTTCTGTACCTCAGATGGACTCCTGCTGGGCCTTCGGGGTCTCAGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 72 bp CCAGCAGACCAAGTCCTGTGTGTACGCGTATGTGTGTaGATTCACACCCATGTGCAGGAAGGGGGACGCGAG +
Preference number: 3 (lower is better)
Translates to: PADQVLCVRVCV*IHTHVQEGGRE
Trigger: CTCGCGTCCCCCTTCCTGCACATGGGTGTGAATGCACACACATACGCGTACACACAGGACTTGGTCTGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 72 bp AGCAGGAGTCCATCTGAGGTACAGAACCTGTGCTTCTaGCATGTTCCTGGGGCAGGGGCATTCCATTTCCCC +
Preference number: 3 (lower is better)
Translates to: SRSPSEVQNLCF*HVPGAGAFHFP
Trigger: GGGGAAATGGAATGCCCCTGCCCCAGGAACATGGCAGAAGCACAGGTTCTGTACCTCAGATGGACTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp CAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTaGCCTGGTAGAACTGGGTCTATGTTCTGCAGTTAC +
Preference number: 3 (lower is better)
Translates to: QSSPVWWFPTLA*PGRTGSMFCSY
Trigger: GTAACTGCAGAACATAGACCCAGTTCTACCAGGCCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp AATACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTaGTTCCCAACGCTGGCCTGGCCTGGTAGAACTGGG +
Preference number: 3 (lower is better)
Translates to: NTVSKAQSSPVW*FPTLAWPGRTG
Trigger: CCCAGTTCTACCAGGCCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 72 bp ACGCTGGCCTGGCCTGGTAGAACTGGGTCTATGTTCTaGAGTTACACTGCCGCTAGTTCATGTTTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: TLAWPGRTGSMF*SYTAASSCFPS
Trigger: GCTGGGGAAACATGAACTAGCGGCAGTGTAACTGCAGAACATAGACCCAGTTCTACCAGGCCAGGCCAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp GGAAATACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTaGTGGTTCCCAACGCTGGCCTGGCCTGGTAGAACT +
Preference number: 3 (lower is better)
Translates to: GNTVSKAQSSPV*WFPTLAWPGRT
Trigger: AGTTCTACCAGGCCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGTATTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR-3UTR CAA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGCCCATCCCTTCCAGCTaGAAGGGATCTGGGGCTCAA +
Preference number: 3 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVPIPSS*KGSGAQ
Trigger: TTGAGCCCCAGATCCCTTCAAGCTGGAAGGGATGGG...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 72 bp AGGGAATGGCTGAAAAACCAAGAATTCCAGCCCGGATaGGCCCACGGGGACTTCATCAGCAGTGCTTTGTCC +
Preference number: 3 (lower is better)
Translates to: REWLKNQEFQPG*AHGDFISSALS
Trigger: GGACAAAGCACTGCTGATGAAGTCCCCGTGGGCTCATCCGGGCTGGAATTCTTGGTTTTTCAGCCATTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp GCGTTATATACATTCTGCAGCTGTAGAATCAGAATCTaGGGGAAGCCAACTGAGACCCCGAAGGCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: ALYTFCSCRIRI*GKPTETPKAQQ
Trigger: CTGCTGGGCCTTCGGGGTCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 72 bp AAGGTTGAAGCGGGAGAATCAGTTGAGCCACGAGTTTaGGATCAGCTTGGGCAACATATTAGAGACCCTGTC +
Preference number: 3 (lower is better)
Translates to: KVEAGESVEPRV*DQLGQHIRDPV
Trigger: GACAGGGTCTCTAATATGTTGCCCAAGCTGATCTCAAACTCGTGGCTCAACTGATTCTCCCGCTTCAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 72 bp TCTGGGAACAGAAATGGCTGTGAGGGACTTGATGATTaGGTGACTCTGCAGGGAATGGCTGAAAAACCAAGA +
Preference number: 3 (lower is better)
Translates to: SGNRNGCEGLDD*VTLQGMAEKPR
Trigger: TCTTGGTTTTTCAGCCATTCCCTGCAGAGTCACTCAATCATCAAGTCCCTCACAGCCATTTCTGTTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 72 bp GAAAGACAGAGTATACAGAACCTTAACCTAGCTGGGTaGAGTAGCATGTATCTGTCGTCCCAGCTACTCAAG +
Preference number: 3 (lower is better)
Translates to: ERQSIQNLNLAG*SSMYLSSQLLK
Trigger: CTTGAGTAGCTGGGACGACAGATACATGCTACTGCACCCAGCTAGGTTAAGGTTCTGTATACTCTGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CCA 72 bp TTTCACCTAATACTTTCTCACACGCCAGGCTACACATaGAAATACTGTAAGCAAAGCCCAAAGCAGCCCTGT +
Preference number: 3 (lower is better)
Translates to: FHLILSHTPGYT*KYCKQSPKQPC
Trigger: ACAGGGCTGCTTTGGGCTTTGCTTACAGTATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR GCA 72 bp ACTCTACCACCAGCGAAACACTACCCAGACTCAATATaGCCGCATGATTACTCCAAATCATTACCAGTTTTG +
Preference number: 3 (lower is better)
Translates to: TLPPAKHYPDSI*PHDYSKSLPVL
Trigger: CAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTAGTGTTTCGCTGGTGGTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR TCA 72 bp ACCAGCGAAACACTACCCAGACTCAATATGCCCGCATaGTTACTCCAAATCATTACCAGTTTTGTGTTGTTG +
Preference number: 3 (lower is better)
Translates to: TSETLPRLNMPA*LLQIITSFVLL
Trigger: CAACAACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTAGTGTTTCGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGCCAGGGCGCTGCTGTTaGGCCGGCTCTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKPGRCC*AGSGWP
Trigger: AGGCCAGCCAGAGCCGGCCCAACAGCAGCGCCCTGG...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGTTTCCATGCCTCCGGTaGCAACACCCCGCACGTGCC +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKFPCLR*QHPARA
Trigger: GGCACGTGCGGGGTGTTGGCACCGGAGGCATGGAAA...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGAGCAGCCCTGTCTGGTaGTTCCCAACGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKSSPVW*FPTLAW
Trigger: CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCT...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGGGACCCGCATGGGGTTaGGCTCGTGGTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAGPAWG*ARGVAA
Trigger: AGCCGCCACACCACGAGCTCAACCCCATGCGGGTCC...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGGGCTCAGGCGGCACTaGGCGGGGACGCGGCAACTC +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRGLRRH*AGTRQL
Trigger: GAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCC...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTAGGTCTCCAGGGCGCTaGTGTTGGGCCGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GAEANSPPVSPADRVGQSRSPGR*CWAGSG
Trigger: GCCAGAGCCGGCCCAACAGCAGCGCCCTGGAGACCT...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGCAGAGGTGCAGAGGCTaGTGCAGTCCGAGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKQRCRG*CSPSPS
Trigger: AGAGGGACTCGGACTGCAGCAGCCTCTGCACCTCTG...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGGCTCCTTCTCATGCTTaGGCAGCAGCTCGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKAPSHA*AAARAA
Trigger: AGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGAGC...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGTGGGGTGGAGGGGTTTaGGCACTCCGCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEWGGGV*ALRLLA
Trigger: AGCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCA...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTTGTTGGCTGCTGGGCTaGGGTCCCCACCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GAEANSPPVSPADRVGQSCWLLG*GPHPAQ
Trigger: CTGAGCAGGGTGGGGACCTCAGCCCAGCAGCCAACA...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGACTCACGCTGCTCAGCTaGGCTGCCCCCGCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRLTLLS*AAPAVD
Trigger: ATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAG...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGCAGCTGCGCGGCACTaGGTCGGGTTTCTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEAAARH*VGFLGS
Trigger: AGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGC...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGTGTCCTGAGACTGGCTaGGTGCCAGCGGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGECPETG*VPAGWK
Trigger: CTTCCACCCCGCTGGCACCCAGCCAGTCTCAGGACA...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGTCCAGGGGCCACGACTaGGGGACTGGTGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGESRGHD*GTGGLE
Trigger: CTCCAAACCACCAGTCCCCCAGTCGTGGCCCCTGGA...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGACGGCCTTGCTTGGGGTaGAGGGGTTTGGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRRPCLG*RGLGTP
Trigger: CGGAGTGCCCAAACCCCTCCACCCCAAGCAAGGCCG...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
3UTR CAA 72 bp ACGAGGAATACCGCGTGGGCCTCTCAGAGATGGGCATaGCACGGTGGCTCCACGGTGAGGCTAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: TRNTAWASQRWA*HGGSTVRLGDP
Trigger: GGGGTCACCTAGCCTCACCGTGGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGGTATCTGGGGCTCCGTaGGGCCTCTGTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAVSGAP*GLCPAP
Trigger: TGGAGCTGGACAGAGGCCTCACGGAGCCCCAGATAC...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGCATGTTCACAGAGAATaGAGGAGAAGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKHVHRE*RRRPWG
Trigger: GCCCCAGGGCCTTCTCCTTCATTCTCTGTGAACATG...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGCTGGGGGAAGCCAACTaGGACCCCGAAGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVLGEAN*DPEGPA
Trigger: TGCTGGGCCTTCGGGGTCTCAGTTGGCTTCCCCCAG...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGTGCTTCACCAGCTGGTaGCTCTCCTGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGECFTSW*LSCSWC
Trigger: GCACCAGCTGCAGGAGAGGCACCAGCTGGTGAAGCA...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGTCCCGCTCCTTCTCATaGTTGCGCAGCAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGESRSFS*LRSSSC
Trigger: GCACGAGCTGCTGCGCAAGCATGAGAAGGAGCGGGA...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGCTCACGCTGCTCAGCTaGGCTGCCCCCGCCGTTGAT +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQLTLLS*AAPAVD
Trigger: ATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAG...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTCTCCCACACCTCGTTaGGGTCCAGGTCGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQSPTPR*GPGRGG
Trigger: TCCGCCGCGACCTGGACCCCAACGAGGTGTGGGAGA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTGGGTGCCAGCGGGGTaGAAGGTGACTCCTCGAGAG +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAWVPAG*KVTPRE
Trigger: CTCTCGAGGAGTCACCTTCCACCCCGCTGGCACCCA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGAGTCCGAGTCCCTCTTaGAAGGCCCTGGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGESPSPS*KALELP
Trigger: AGGCAGCTCCAGGGCCTTCCAAGAGGGACTCGGACT...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTCATGGTCTCACACATaGCCACCTCGGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRASWSHT*PPRGPS
Trigger: GGATGGCCCCCGAGGTGGTCATGTGTGAGACCATGA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGCAGCGGGGTGGAAGGTaGCTCCTCGAGAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQQRGGR*LLERLV
Trigger: GACAAGCCTCTCGAGGAGTCACCTTCCACCCCGCTG...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGCTGCCCCCGCCGTTaGTGTGGAGGCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGRCPRR*CGGSSC
Trigger: ACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCG...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCGAGGGGCTGGATTTaGGCTGGCACAGACGCAAGA +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRARGWI*AGTDAR
Trigger: TCTTGCGTCTGTGCCAGCTCAAATCCAGCCCCTCGC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGCTTGAAGGGCAAAAGTaGTGTGAAGGACGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKLEGQK*CEGRAT
Trigger: CGTGGCTCGTCCTTCACATCACTTTTGCCCTTCAAG...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGAGGTCGCGGCGGACGTaGTCATATTCGCGGGACTTT +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGERSRRT*SYSRDF
Trigger: AAAGTCCCGCGAATATGAGCACGTCCGCCGCGACCT...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGCCCCAGAGGGCTGGCTaGAGGGCTCATTCACACTGT +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAPQRAG*RAHSHC
Trigger: ACAGTGTGAATGAGCCCTGCAGCCAGCCCTCTGGGG...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGGCTCCTTCTCATGCTTaGGCAGCAGCTCGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAAPSHA*AAARAA
Trigger: AGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGAGC...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATCCCGCTCCTTCTCATaGTTGCGCAGCAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRSRSFS*LRSSSC
Trigger: GCACGAGCTGCTGCGCAAGCATGAGAAGGAGCGGGA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGAAGGAGGAGGAGTTaGAGGACGCCGCGTCTCTCG +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRARRRRS*RTPRLS
Trigger: CGAGAGACGCGGCGTCCTCCAACTCCTCCTCCTTCT...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATATGGTTCTCCAGGGTaGAGGCGGCATCCACGGCGT +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRYGSPG*RRHPRR
Trigger: ACGCCGTGGATGCCGCCTCCACCCTGGAGAACCATA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGCCTCTTGGAAGGCCCTaGAGCTGCCTGGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQPLGRP*SCLGRW
Trigger: CCACCTGCCCAGGCAGCTCCAGGGCCTTCCAAGAGG...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGTGGGGTGGAGGGGTTTaGGCACTCCGCCTCCTCGCT +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQWGGGV*ALRLLA
Trigger: AGCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCA...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGCGGCCTTGCTTGGGGTaGAGGGGTTTGGGCACTCCG +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRRPCLG*RGLGTP
Trigger: CGGAGTGCCCAAACCCCTCCACCCCAAGCAAGGCCG...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
3UTR CAA 72 bp GGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTaGAAGGGCAAAAGTGATGTGAAGGACGAGCCACGA +
Preference number: 4 (lower is better)
Translates to: GSGGTERGRGNS*KGKSDVKDEPR
Trigger: TCGTGGCTCGTCCTTCACATCACTTTTGCCCTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGCGCTGCCCCCGCCGTTaGTGTGGAGGCTCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRRCPRR*CGGSSC
Trigger: ACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCG...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCATGTTCACAGAGAATaGAGGAGAAGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEHVHRE*RRRPWG
Trigger: GCCCCAGGGCCTTCTCCTTCATTCTCTGTGAACATG...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGAATTCCAGCCCGGATaGGCCCACGGGGACTTCATC +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVEFQPG*AHGDFI
Trigger: GATGAAGTCCCCGTGGGCTCATCCGGGCTGGAATTC...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGAGAACAGGAGGAATaGGGCCATCTCCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRGEQEE*GHLLSS
Trigger: GCTGCTCAGGAGATGGCCTCATTCCTCCTGTTCTCC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAAGGGCAAAAGTGATGTaGAGGACGAGCCACGAGGGG +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRRAKVM*RTSHEG
Trigger: CCCCTCGTGGCTCGTCCTTCACATCACTTTTGCCCT...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTTGCGCAGCAGCTCGTaGCGCTGGAGGAAGTACTGG +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQLRSSS*RWRKYW
Trigger: CCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGTTGCGCAGCAGCTCGTaGCGCTGGAGGAAGTACTGG +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGLRSSS*RWRKYW
Trigger: CCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAA...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGTTGATCTTCTCACGCTaGTCAGCTGCGCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGLIFSR*SAALPP
Trigger: CGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGATCAA...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCAGCTCGCTCATGTTaGTCTCACACTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRAARSC*SHTAPA
Trigger: TGCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGAGAAGTCCAACAGACTaGCAGCCCAGGTCTGAAATG +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKRSPTD*QPRSEM
Trigger: CATTTCAGACCTGGGCTGGCAGTCTGTTGGACTTCT...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGGTTGAGCTCGTGGTGTaGCGGCTCGATCTGGGCCAT +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQVELVV*RLDLGH
Trigger: ATGGCCCAGATCGAGCCGCCACACCACGAGCTCAAC...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGCTCCAGGCTGCCATTaGCCAGCTTCTCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQAPGCH*PASPHP
Trigger: TGGGTGGGGAGAAGCTGGCCAATGGCAGCCTGGAGC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATTTGCCCTCACTCCTCTaGATCTTGGGCAGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDLPSLL*ILGSRA
Trigger: GGCGCGGCTGCCCAAGATCCAGAGGAGTGAGGGCAA...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGCTTGGCGGCCTTGCTTaGGGTGGAGGGGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQLGGLA*GGGVWA
Trigger: TGCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAG...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCACGCATCGCAGCCTaGCAGTACAGCCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRARIAA*QYSLCF
Trigger: AAAGCACAGGCTGTACTGCCAGGCTGCGATGCGTGC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCTCCTGCTTCTTCATaGGGCACTCGCGCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVAPASS*GTRAPC
Trigger: ACAAGGAGCGCGAGTGCCTCATGAAGAAGCAGGAGC...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCTGGGAGAACTGCTTaGTCTTCTCACGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRAGRTA*SSHAAQ
Trigger: CTGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAGC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGGGCTGGATTTaGGCTGGCACAGACGCAAGA +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRARGWI*AGTDAR
Trigger: TCTTGCGTCTGTGCCAGCTCAAATCCAGCCCCTCGC...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGGAAGCCTCGTGTGCTaGGGAATCAGTCCCTGCACA +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVGSLVC*GISPCT
Trigger: TGTGCAGGGACTGATTCCTCAGCACACGAGGCTTCC...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGCCATGCTCTCAGAGGTaGAGAGGCTGCTGCAGTCCG +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQPCSQR*RGCCSP
Trigger: CGGACTGCAGCAGCCTCTGCACCTCTGAGAGCATGG...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATCCAGGTCCTCCTTCTaGTTGGCTACAAAGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRSRSSF*LATKSR
Trigger: CCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGCATCTCCCACAGGGCTaGTTCCCGGTCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQHLPQG*FPVSKE
Trigger: CTCCTTCGAGACCGGGAAGCAGCCCTGTGGGAGATG...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGCATCTCCCACAGGGCTaGTTCCCGGTCTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRHLPQG*FPVSKE
Trigger: CTCCTTCGAGACCGGGAAGCAGCCCTGTGGGAGATG...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGTGCTTCACCAGCTGGTaGCTCTCCTGCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQCFTSW*LSCSWC
Trigger: GCACCAGCTGCAGGAGAGGCACCAGCTGGTGAAGCA...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGGCCTTTTCCTGTTGCTaGCGCACCTTCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAAFSCC*RTFSCS
Trigger: AGAGCAGCTGAAGGTGCGGCAGCAACAGGAAAAGGC...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCCTTTTCCTGTTGCTaGCGCACCTTCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRAFSCC*RTFSCS
Trigger: AGAGCAGCTGAAGGTGCGGCAGCAACAGGAAAAGGC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTGGCCATGCGCGTCTTaGCCTCACTCCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQWPCAS*PHSSGS
Trigger: AGATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATCTTGTACATGGCCATaGGCGTCTTGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRSCTWP*ASCPHS
Trigger: GGAGTGAGGGCAAGACGCGCATGGCCATGTACAAGA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTTGATCTTCTCACGCTaGTCAGCTGCGCTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRLIFSR*SAALPP
Trigger: CGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGATCAA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTTCGTGTTTCTGCTGTTaGTGCAGCCGCTCCGACTTC +
Preference number: 4 (lower is better)
Translates to: GAEANSPPVSPADRVGQSSCFCC*CSRSDF
Trigger: GAAGTCGGAGCGGCTGCAGCAACAGCAGAAACACGA...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTCGTGTTTCTGCTGTTaGTGCAGCCGCTCCGACTTC +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRASCFCC*CSRSDF
Trigger: GAAGTCGGAGCGGCTGCAGCAACAGCAGAAACACGA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTGGTTCTCGTGTTTCTaGTGTTGCTGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAWFSCF*CCCSRS
Trigger: GGAGCGGCTGCAGCAACAGCAGAAACACGAGAACCA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAATGTTGCTCTCACACTaGGCCAGCATGTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRMLLSH*ASMSRI
Trigger: GATGCGGGACATGCTGGCGCAGTGTGAGAGCAACAT...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATTCCTGTTGAAGGGCTaGCCCTCCCTTCCCAAGCAT +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRFLLKG*PSLPKH
Trigger: ATGCTTGGGAAGGGAGGGGCAGCCCTTCAACAGGAA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGTGTGGCGGCTCGATCTaGGCCATCTCAATCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVCGGSI*AISISV
Trigger: CACGCTGATTGAGATGGCCCAGATCGAGCCGCCACA...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGTGGGAGGGTCCGACTTaGCGATCTTTAGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVWEGPT*RSLAGP
Trigger: GGGTCCTGCTAAAGATCGCCAAGTCGGACCCTCCCA...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATCTGTCCCCAGAGGGCTaGCTGCAGGGCTCATTCACA +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDLSPEG*LQGSFT
Trigger: TGTGAATGAGCCCTGCAGCCAGCCCTCTGGGGACAG...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGACGATGCTCTTCTTTCTaGAGCAGCCGAAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRRCSSF*SSRSSR
Trigger: CCGAGAGCTTCGGCTGCTCCAGAAAGAAGAGCATCG...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTGCCTCTCCTGCAGCTaGTGCTCTTCCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQCLSCS*CSSISH
Trigger: GTGGGAGATGGAAGAGCACCAGCTGCAGGAGAGGCA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGCCCCCGCCGTTGATGTaGAGGCTCTTCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAPPPLM*RLFLYM
Trigger: CATGTACAAGAAGAGCCTCCACATCAACGGCGGGGG...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGTCTATCAGGCACAGTTaGGGTGGCACAGGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQSIRHS*GGTGRG
Trigger: CCCTCGCCCTGTGCCACCCCAACTGTGCCTGATAGA...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGACGAGGAATACCGCGTaGGCCTCTCAGAGATGGGCA +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVTRNTA*ASQRWA
Trigger: TGCCCATCTCTGAGAGGCCCACGCGGTATTCCTCGT...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGTGTCCAGCTCCAGCATaGTGGCGTCCACGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSECPAPA*WRPRLP
Trigger: GGGGAGCCGTGGACGCCATCATGCTGGAGCTGGACA...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGAGTTCCTGGCGCCTaGGAAATCTCATCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRGVPGA*EISSPH
Trigger: ATGAGGAGATGAGATTTCTCAGGCGCCAGGAACTCC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGGGAAGTACTGGTCTTTaGGCTGCTGCTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAGSTGL*AAASPA
Trigger: AGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCC...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGGATGCTCCAGCAGCTaGGCGGCACTGGGTCGGGTT +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEGCSSS*AALGRV
Trigger: AACCCGACCCAGTGCCGCGCAGCTGCTGGAGCATCC...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACCTGCTGACGAAGGGATaGTCCAGCAGCTGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHLLTKG*SSSCAA
Trigger: TGCCGCGCAGCTGCTGGAGCATCCCTTCGTCAGCAG...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGTGGCCATGCGCGTCTTaGCCTCACTCCTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQWPCAS*PHSSGS
Trigger: AGATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCA...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATCCTGCTGGGAGAACTaGTTGATCTTCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRSCWEN*LIFSRC
Trigger: GCAGCGTGAGAAGATCAAGCAGTTCTCCCAGCAGGA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTGCCTCTTCTCCTCCTaGTGGGAGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRACLFSS*WENCLI
Trigger: GATCAAGCAGTTCTCCCAGCAGGAGGAGAAGAGGCA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATCAGAACCTGTGCTTCTaGCATGTTCCTGGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDQNLCF*HVPGAG
Trigger: CCCTGCCCCAGGAACATGGCAGAAGCACAGGTTCTG...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTGAGGTACAGAACCTGTaGTTCTGCCATGTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GAEANSPPVSPADRVGQSEVQNL*FCHVPG
Trigger: CCCAGGAACATGGCAGAAGCACAGGTTCTGTACCTC...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGAGACTCCATCTTCTTaGGCGGCCGAAGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQETPSS*AAEACP
Trigger: GGGACAAGCTTCGGCCGCGCAAGAAGATGGAGTCTC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS-3UTR CCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGAGGGGTGGTCGCAGGTaGCCAGGATCTCAATCTCCA +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWRGGRR*PGSQSP
Trigger: TGGAGATTGAGATCCTGGCCACCTGCGACCACCCCT...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGTGCCTCTCCTGCAGCTaGTGCTCTTCCATCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQCLSCS*CSSISH
Trigger: GTGGGAGATGGAAGAGCACCAGCTGCAGGAGAGGCA...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGACGCTGGAGGAAGTACTaGTCTTTGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRRWRKY*SLSCCF
Trigger: GAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCG...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGCACTCCTCTGGATCTTaGGCAGCCGCGCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQHSSGS*AAAPFP
Trigger: AGGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTG...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGCACTCCTCTGGATCTTaGGCAGCCGCGCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQHSSGS*AAAPFP
Trigger: AGGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTG...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCTCTTCTCCTCCTGCTaGGAGAACTGCTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGELFSSC*ENCLIF
Trigger: GAAGATCAAGCAGTTCTCCCAGCAGGAGGAGAAGAG...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTGTAGGGGAAGAACTTaGCGGCCTTGCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRCRGRT*RPCLGW
Trigger: CCACCCCAAGCAAGGCCGCCAAGTTCTTCCCCTACA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGGAGCAGACTGGGTTGTaGAAGCCTCGTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWEQTGL*KPRVLR
Trigger: CCTCAGCACACGAGGCTTCCACAACCCAGTCTGCTC...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGTGCTGTGCAGGAAGTTaGGGGCTTCTAGCATCTGGC +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQCCAGS*GLLASG
Trigger: GCCAGATGCTAGAAGCCCTCAACTTCCTGCACAGCA...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGGGACGCGAGATGGCATaGAACACGGGAGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWGREMA*NTGEAE
Trigger: TTCTGCTTCTCCCGTGTTTCATGCCATCTCGCGTCC...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACCTGCCAGCCCAGGTCTaGAATGCAAGGTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHLPAQV*NARWDS
Trigger: GGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAG...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GGGAGCTCTGAGGGCTCAGGCGGCACTGAGCGGGGACGCGGCAACTCCTTGAAGGATGCTTTTTCTTCCTaGAGAGAAGTCCAACAGACT +
Preference number: 4 (lower is better)
Translates to: GSSEGSGGTERGRGNSLKDAFSS*REVQQT
Trigger: AGTCTGTTGGACTTCTCTTCAGGAAGAAAAAGCATC...CTTCAAGGAGTTGCCGCGTCCCCGCTCAGTGCCGCCTGAGCCCTCAGAGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGACCATCTTCTGCTTCATaGTTTCCTTCCGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRPSSAS*FPSAAV
Trigger: GACAGCAGCGGAAGGAAAGCATGAAGCAGAAGATGG...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGTCTCGAAGGAGCTCCTaGTTCTTCATGAGGCACTCG +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVSRRSS*FFMRHS
Trigger: CGAGTGCCTCATGAAGAAGCAGGAGCTCCTTCGAGA...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGTACTGGTCTTTGAGCTaGTGCTTCACCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGYWSLS*CFTSWC
Trigger: GCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTA...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTGCCGCACCTTCAGCTaGTCTATCATGCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRCRTFS*SIMRWL
Trigger: CAACCAGCGCATGATAGAGCAGCTGAAGGTGCGGCA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTCCTGCTGGGAGAACTaGTTGATCTTCTCACGCTGC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQSCWEN*LIFSRC
Trigger: GCAGCGTGAGAAGATCAAGCAGTTCTCCCAGCAGGA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTGTTTCTGCTGTTGCTaGAGCCGCTCCGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRCFCCC*SRSDFC
Trigger: GCAGAAGTCGGAGCGGCTGCAGCAACAGCAGAAACA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGAGTTTCTGGGTTTCGTaGTCTACCAGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQSFWVS*STRRWH
Trigger: GTGCCACCTCCTGGTAGAGCACGAAACCCAGAAACT...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGCCAACACCCCGCACGTaGCACACCAACTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMPTPRT*HTNCST
Trigger: GGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGG...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTCAGCATTGAGGCTTaGCGGACTCACCTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQVSIEA*RTHLRG
Trigger: TCCTCTGAGGTGAGTCCGCCAAGCCTCAATGCTGAC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACCGACTGGGGGACTGGTaGTTTGGAGGGATCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHRLGDW*FGGICP
Trigger: GGGACAGATCCCTCCAAACCACCAGTCCCCCAGTCG...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTTGCCCTCACTCCTCTaGATCTTGGGCAGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMLPSLL*ILGSRA
Trigger: GGCGCGGCTGCCCAAGATCCAGAGGAGTGAGGGCAA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGGGCTCTTCTTGTACATaGCCATGCGCGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWGSSCT*PCASCP
Trigger: AGGGCAAGACGCGCATGGCCATGTACAAGAAGAGCC...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGGCTCTTCTTGTACATaGCCATGCGCGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRGSSCT*PCASCP
Trigger: AGGGCAAGACGCGCATGGCCATGTACAAGAAGAGCC...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTCTCTTCTCCTCCTGCTaGGAGAACTGCTTGATCTTC +
Preference number: 4 (lower is better)
Translates to: GAEANSPPVSPADRVGQSLFSSC*ENCLIF
Trigger: GAAGATCAAGCAGTTCTCCCAGCAGGAGGAGAAGAG...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATGCTCTACCAGGAGGTaGCACTTTTCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRCSTRR*HFSFCS
Trigger: GCTGCAGAATGAAAAGTGCCACCTCCTGGTAGAGCA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATTCAGGTTCTGGTTATaGCTCTCATCCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRFRFWL*LSSRAF
Trigger: GAAGGCCCTGGATGAGAGCCATAACCAGAACCTGAA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGCTTGGCGGCCTTGCTTaGGGTGGAGGGGTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMLGGLA*GGGVWA
Trigger: TGCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAG...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGGCTGGATTTGAGCTaGCACAGACGCAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQGLDLS*HRRKRE
Trigger: TTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGCCC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGAAAAACACCCCCATCTaGGTCAAATTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEKNTPI*VKFCSR
Trigger: CCTGCTGCAGAATTTGACCCAGATGGGGGTGTTTTT...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACATGGGCATTGCACGGTaGCTCCACGGTGAGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHMGIAR*LHGEAR
Trigger: CCTAGCCTCACCGTGGAGCCACCGTGCAATGCCCAT...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATACCTCAGAGGAGTTCTaGGTATGGTTCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDTSEEF*VWFSRV
Trigger: CACCCTGGAGAACCATACTCAGAACTCCTCTGAGGT...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGGCCTGTTGTCGGTGGTaGGCCTCTTCATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LIQKALTQGTRNTAWASQACCRW*ASSWPA
Trigger: AGCTGGCCATGAAGAGGCTCACCACCGACAACAGGC...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGAAGTACTGGTCTTTaGGCTGCTGCTTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQGSTGL*AAASPA
Trigger: AGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGGAAAAGGGGTCCTaGGTTACATGTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAREKGS*VTCSQR
Trigger: TCTCTGTGAACATGTAACTCAGGACCCCTTTTCCCT...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR TCA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACCCATCCCTTCCAGCTTaGAGGGATCTGGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHPSLPA*RDLGLK
Trigger: CTTGAGCCCCAGATCCCTTCAAGCTGGAAGGGATGG...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTCACGGTGAGGCTAGGTaGCCCCGCCAGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESHGEAR*PRQSPS
Trigger: GGATGGGGACTGGCGGGGTCACCTAGCCTCACCGTG...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGTGCAGAGGCTGCTaGAGTCCGAGTCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LIQKALTQGTRNTAWASQRCRGC*SPSPSW
Trigger: CCAAGAGGGACTCGGACTGCAGCAGCCTCTGCACCT...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGTCCCGGTCAAGAAGCTaGTTTTTCTGCGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWSRSRS*FFCVCS
Trigger: GGAGCACACGCAGAAAAAGCAGCTTCTTGACCGGGA...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATTACTGGTCTTTGAGCTaGTGCTTCACCAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDYWSLS*CFTSWC
Trigger: GCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTA...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGTGGCACTTTTCATTCTaGAGCTGCTGCAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQWHFSF*SCCSSL
Trigger: GAGCGAGCTGCAGCAGCTGCAGAATGAAAAGTGCCA...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGAGTTTCTGGGTTTCGTaGTCTACCAGGAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQSFWVS*STRRWH
Trigger: GTGCCACCTCCTGGTAGAGCACGAAACCCAGAAACT...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTTGAAGAACATCTCCTaGTCCCGCTTCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRALKNIS*SRFFWF
Trigger: GAACCAGAAGAAGCGGGAGCAGGAGATGTTCTTCAA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGGGATGCGGCGGAAATTaGCAAAAGCCATGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMGCGGN*QKPWPG
Trigger: CCCCGGCCATGGCTTTTGCCAATTTCCGCCGCATCC...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGTCCACGGCTCCCCCTaGACAGAACTCAATCATGAT +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQVHGSP*TELNHD
Trigger: ATCATGATTGAGTTCTGTCCAGGGGGAGCCGTGGAC...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGGGCTACCTGAATTCTaGCATCCATTGACACGGGTC +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRGLPEF*HPLTRV
Trigger: GACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCC...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGAGCTCTCGGAGTTCCTaGCGCCTGAGAAATCTCATC +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWSSRSS*RLRNLI
Trigger: GATGAGATTTCTCAGGCGCCAGGAACTCCGAGAGCT...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTGCTCTACCAGGAGGTaGCACTTTTCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQCSTRR*HFSFCS
Trigger: GCTGCAGAATGAAAAGTGCCACCTCCTGGTAGAGCA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGACATTCCTTCAGGTTCTaGTTATGGCTCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRHSFRF*LWLSSR
Trigger: CCTGGATGAGAGCCATAACCAGAACCTGAAGGAATG...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGTGCTCCCGCTTCTTCTaGTTCAGATCCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGCSRFF*FRSSSR
Trigger: TCTGGAAGAGGATCTGAACCAGAAGAAGCGGGAGCA...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATAACACCCATTCCTCTTaGACCCTGACCCCACCAACA +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDNTHSS*TLTPPT
Trigger: TGTTGGTGGGGTCAGGGTCCAAGAGGAATGGGTGTT...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGCACCTGCAGACAGGGTaGGCCAGAGTGCTATGGAGC +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEHLQTG*ARVLWS
Trigger: GCTCCATAGCACTCTGGCCCACCCTGTCTGCAGGTG...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTCTGCAGGGAATGGCTaGAAAACCAAGAATTCCAGC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQSAGNG*KTKNSS
Trigger: GCTGGAATTCTTGGTTTTTCAGCCATTCCCTGCAGA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGAGGGACTTGATGATTaGGTGACTCTGCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQEGLDD*VTLQGM
Trigger: CATTCCCTGCAGAGTCACTCAATCATCAAGTCCCTC...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTAAATGCTCACTAACCTaGGAACCATTGCTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GAEANSPPVSPADRVGQSKCSLT*EPLLAP
Trigger: TGGAGCTAGCAATGGTTCTCAGGTTAGTGAGCATTT...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGCAGGGGCACAGGCACTaGCAGGCCGTTCTCATTTCC +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVQGHRH*QAVLIS
Trigger: GGAAATGAGAACGGCCTGGCAGTGCCTGTGCCCCTG...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGTGCTTTTTCTGCGTGTaGTCCTCCATCTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVCFFCV*SSIFCF
Trigger: GAAGCAGAAGATGGAGGAGCACACGCAGAAAAAGCA...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGAGAAGCTGCTTTTTCTaGGTGTGCTCCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGRSCFF*VCSSIF
Trigger: GAAGATGGAGGAGCACACGCAGAAAAAGCAGCTTCT...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGGCAGCTCGCTCATGTTaGTCTCACACTGCGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMAARSC*SHTAPA
Trigger: TGCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGC...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGTGGGCCGGCTCTGGCTaGCCTTTTGAGATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEWAGSG*PFEICW
Trigger: CCAACAGATCTCAAAAGGCCAGCCAGAGCCGGCCCA...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGTCAGCGACAGGTCAGTaGAGAGATTGGTACCATAGT +
Preference number: 4 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGSATGQ*RDWYHS
Trigger: ACTATGGTACCAATCTCTCCACTGACCTGTCGCTGA...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTTACTCAGCTGGGTCTaGTTCCGATGCTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQLLSWV*FRCSSF
Trigger: GAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTGCTTGTTACTCAGCTaGGTCTGGTTCCGATGCTCT +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRCLLLS*VWFRCS
Trigger: AGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGAGCATGTCCCGCATCTaGTTCTCGTGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRSMSRI*FSCFCC
Trigger: ACAGCAGAAACACGAGAACCAGATGCGGGACATGCT...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGAGCATGTCCCGCATCTaGTTCTCGTGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQSMSRI*FSCFCC
Trigger: ACAGCAGAAACACGAGAACCAGATGCGGGACATGCT...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTTCAGGTTCTGGTTATaGCTCTCATCCAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRFRFWL*LSSRAF
Trigger: GAAGGCCCTGGATGAGAGCCATAACCAGAACCTGAA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGCAGCTTGAAGGGATCTaGGGCTCAAGGAGAATATAC +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQQLEGI*GSRRIY
Trigger: GTATATTCTCCTTGAGCCCCAGATCCCTTCAAGCTG...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAACGCCAGGCTACACATaGAAATACTGTAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRTPGYT*KYCKQS
Trigger: GCTTTGCTTACAGTATTTCCATGTGTAGCCTGGCGT...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGTGGGCCTCTCAGAGATaGGCATTGCACGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVWASQR*ALHGGS
Trigger: GGAGCCACCGTGCAATGCCCATCTCTGAGAGGCCCA...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGACTTGCTGCTTTTGCTaGCGCTCCAGGTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQTCCFC*RSRFSN
Trigger: ATTAGAGAACCTGGAGCGTCAGCAAAAGCAGCAAGT...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGCTCAATATGCCCGCATaGTTACTCCAAATCATTACC +
Preference number: 4 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRALNMPA*LLQIIT
Trigger: GGTAATGATTTGGAGTAATCATGCGGGCATATTGAG...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTCCTCTTCCAGAGCCTaGGTTGAGATTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMSSSRA*VEIAPL
Trigger: CAGTGGCGCAATCTCAACTCAGGCTCTGGAAGAGGA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGATGATCCTCTTGCTGTaGAGGAAGTTGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQMILLL*RKLRAS
Trigger: AGAAGCCCTCAACTTCCTGCACAGCAAGAGGATCAT...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACGGGTCATCAGCACGTTaGCAGCTTTCAGATCTCGGT +
Preference number: 4 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHGSSAR*QLSDLG
Trigger: ACCGAGATCTGAAAGCTGGCAACGTGCTGATGACCC...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGCTGAGGTCCCCACCCTaGTCAGCAACTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVLRSPP*SATCFS
Trigger: GGAGAAGCAAGTTGCTGAGCAGGGTGGGGACCTCAG...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTGGTTCTCGTGTTTCTaGTGTTGCTGCAGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMWFSCF*CCCSRS
Trigger: GGAGCGGCTGCAGCAACAGCAGAAACACGAGAACCA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGTTTTCATTCTGCAGCTaGTGCAGCTCGCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQFSFCS*CSSLML
Trigger: CAACATGAGCGAGCTGCAGCAGCTGCAGAATGAAAA...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGCTGCTCCACCTAACATaGTCAGTGGCACAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSELLHLT*SVAQAQ
Trigger: CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAG...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGCCGTCTCCTTATTCTTaGCCTTGTAAACCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRPSPYS*PCKPCR
Trigger: TCGGCAAGGTTTACAAGGCCAAGAATAAGGAGACGG...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGAGCAGCTCGTGCCGCTaGAGGAAGTACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMSSSCR*RKYWSL
Trigger: CAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCT...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGTGTAGGGGAAGAACTTaGCGGCCTTGCTTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVCRGRT*RPCLGW
Trigger: CCACCCCAAGCAAGGCCGCCAAGTTCTTCCCCTACA...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGAAGTGGAAAGCAAACTaGGAGAACAGGAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQKWKAN*ENRRNE
Trigger: CTCATTCCTCCTGTTCTCCCAGTTTGCTTTCCACTT...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAAGGGGGACGCGAGATaGCATGAAACACGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LIQKALTQGTRNTAWASQKGDAR*HETREK
Trigger: CTTCTCCCGTGTTTCATGCCATCTCGCGTCCCCCTT...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTGGGCCAGAGTGCTATaGAGCAGACTGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMWARVL*SRLGCG
Trigger: TCCACAACCCAGTCTGCTCCATAGCACTCTGGCCCA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGAATTCTGGCATCCATTaGCACGGGTCGGGACTTCCG +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVNSGIH*HGSGLP
Trigger: CGGAAGTCCCGACCCGTGTCAATGGATGCCAGAATT...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp ACTGTAAGCAAAGCCCAAAGCAGCCCTGTCTGGTGGTTCCCAACGCTGGCCTGGAAACGTTTATGCATTTaGTCCAGCTGCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: TVSKAQSSPVWWFPTLAWKRLCI*SSCSSC
Trigger: GCATGAGCTGCAGCTGGAGCAAATGCATAAACGTTT...CCAGGCCAGCGTTGGGAACCACCAGACAGGGCTGCTTTGGGCTTTGCTTACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTCAGCTGCTCTATCATaGGCTGGTTGTAGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMSAALS*AGCSAA
Trigger: TGCAGCGCTACAACCAGCGCATGATAGAGCAGCTGA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGTCTTGTACATGGCCATaGGCGTCTTGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVSCTWP*ASCPHS
Trigger: GGAGTGAGGGCAAGACGCGCATGGCCATGTACAAGA...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGTGTTTCTGCTGTTGCTaGAGCCGCTCCGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVCFCCC*SRSDFC
Trigger: GCAGAAGTCGGAGCGGCTGCAGCAACAGCAGAAACA...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTGGCACTTTTCATTCTaGAGCTGCTGCAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMWHFSF*SCCSSL
Trigger: GAGCGAGCTGCAGCAGCTGCAGAATGAAAAGTGCCA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGAGCCCAGGTCTGAAATaGAAGGTGGGACTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMSPGLK*KVGLLN
Trigger: GTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCT...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGCGTTATATACATTCTaGAGCTGTAGAATCAGAATC +
Preference number: 4 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEALYTF*SCRIRI
Trigger: GATTCTGATTCTACAGCTGCAGAATGTATATAACGC...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGCTGCTCTTGGAACCTaGTGTAGTCCCGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVAALGT*CSPDPA
Trigger: AGCAGGATCGGGACTACACCAGGTTCCAAGAGCAGC...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGAGGGCCTTCAGTTTCTaGGTTTCGTGCTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMRAFSF*VSCSTR
Trigger: CCTGGTAGAGCACGAAACCCAGAAACTGAAGGCCCT...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTGTGTTCCAACCCACCTaGGCAGAAGAGGCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESVFQPT*AEEARP
Trigger: TGGCCTGGCCTCTTCTGCCCAGGTGGGTTGGAACAC...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTTCTCCTGGGCTACCTaGATTCTGGCATCCATTGAC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMFSWAT*ILASID
Trigger: GTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGACTTGATGATTGAGTaGCTCTGCAGGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEDLMIE*LCREWL
Trigger: CAGCCATTCCCTGCAGAGTCACTCAATCATCAAGTC...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTTTCCCCAGCACCAATaGACCAAAGAGAATAAAAGG +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRFPQHQ*TKENKR
Trigger: CCTTTTATTCTCTTTGGTGCATTGGTGCTGGGGAAA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATACTTCTTCTTGGCGTTaGTTTCCTGTTCAAAACGTT +
Preference number: 4 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDTSSWR*FPVQNV
Trigger: AACGTTTTGAACAGGAAATCAACGCCAAGAAGAAGT...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTGCTGGGAGAACTGCTTaGTCTTCTCACGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESAGRTA*SSHAAQ
Trigger: CTGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAGC...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGGAAAAGGGGTCCTaGGTTACATGTTCACAGAGA +
Preference number: 4 (lower is better)
Translates to: LIQKALTQGTRNTAWASQREKGS*VTCSQR
Trigger: TCTCTGTGAACATGTAACTCAGGACCCCTTTTCCCT...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTGACCTCGGTCAAGTGTaGCCTGGGCAGCGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCDLGQV*PGQRRA
Trigger: GGCGCGGCGCTGCCCAGGGCACACTTGACCGAGGTC...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGTTTTCATTCTGCAGCTaGTGCAGCTCGCTCATGTTG +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEFSFCS*CSSLML
Trigger: CAACATGAGCGAGCTGCAGCAGCTGCAGAATGAAAA...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGCGGTCAAGTGTGCCCTaGGCAGCGCCGCGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLRSSVP*AAPRRE
Trigger: CTCCCGGCGCGGCGCTGCCCAGGGCACACTTGACCG...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATACGGCGGCGCACGGCATaGTCTTGCTCCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEIRRRTA*SCSIFS
Trigger: GGAGAAGATGGAGCAAGACCATGCCGTGCGCCGCCG...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTGTAGAATCAGAATCTaGGGGAAGCCAACTGAGACC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMCRIRI*GKPTET
Trigger: GGTCTCAGTTGGCTTCCCCCAGATTCTGATTCTACA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CAA 72 bp CGTCCCAGCTACTCAAGGTTGAAGCGGGAGAATCAGTaGAGCCACGAGTTTGAGATCAGCTTGGGCAACATA +
Preference number: 4 (lower is better)
Translates to: RPSYSRLKRENQ*SHEFEISLGNI
Trigger: TATGTTGCCCAAGCTGATCTCAAACTCGTGGCTCAACTGATTCTCCCGCTTCAACCTTGAGTAGCTGGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGACTCTGGCTGGCCTTTTaGGATCTGTTGGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRLWLAF*DLLAAG
Trigger: CCCAGCAGCCAACAGATCTCAAAAGGCCAGCCAGAG...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTACAGTTTCGGGTCCTTaGTGGACAGAGAGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESTVSGP*WTESPS
Trigger: AGATGGGCTCTCTGTCCATCAAGGACCCGAAACTGT...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTACATTAGGTTCAGGTaGCAAATAATTACACCTCAC +
Preference number: 4 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRYIRFR*QIITPH
Trigger: GTGAGGTGTAATTATTTGTCACCTGAACCTAATGTA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATATGGCCTTGTAAACCTTaGCGAAGGCGCCGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEIWPCKP*RRRRRP
Trigger: TGGGCGACGGCGCCTTCGGCAAGGTTTACAAGGCCA...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGTTGAAGAACATCTCCTaGTCCCGCTTCTTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVLKNIS*SRFFWF
Trigger: GAACCAGAAGAAGCGGGAGCAGGAGATGTTCTTCAA...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGATCTGGGTCAAATTCTaGAGCAGGCAAGCTAAATGC +
Preference number: 4 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMIWVKF*SRQAKC
Trigger: GCATTTAGCTTGCCTGCTGCAGAATTTGACCCAGAT...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATAATGGGGTTGAGCTCGTaGTGTGGCGGCTCGATCTGG +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEIMGLSS*CGGSIW
Trigger: CCAGATCGAGCCGCCACACCACGAGCTCAACCCCAT...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTCGCTGGAGGAAGTACTaGTCTTTGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESRWRKY*SLSCCF
Trigger: GAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCG...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTCACTCTTGGTTTCAATaGCTTTGGCCGCAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESHSWFQ*LWPQPK
Trigger: CTTTGGCTGCGGCCAAAGTCATTGAAACCAAGAGTG...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGTGTTCAAAACGTTTATaGATTTGCTCCAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YTESTNTGHEEYRVGLSECSKRL*ICSSCS
Trigger: GCTGCAGCTGGAGCAAATGCATAAACGTTTTGAACA...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGAATGTTGCTCTCACACTaGGCCAGCATGTCCCGCATC +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRMLLSH*ASMSRI
Trigger: GATGCGGGACATGCTGGCGCAGTGTGAGAGCAACAT...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTCTTCCAGAGCCTTCTTaGGCGGCCGAAGCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCLPEPS*AAEACP
Trigger: GGGACAAGCTTCGGCCGCGCAAGAAGGCTCTGGAAG...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGTACCCAGACTCAATATaGCCGCATGATTACTCCAAA +
Preference number: 4 (lower is better)
Translates to: LIQKALTQGTRNTAWASQYPDSI*PHDYSK
Trigger: TTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTAGATCTGTTGGCTGCTaGGCTGAGGTCCCCACCCTG +
Preference number: 4 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCRSVGC*AEVPTL
Trigger: CAGGGTGGGGACCTCAGCCCAGCAGCCAACAGATCT...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTAGTAAGGCGTGCCGATaGAGGAATCTCGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESSKACR*RNLVSV
Trigger: TACAGAAACGAGATTCCTTCATCGGCACGCCTTACT...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTTCATTCACACTGTCCTaGGACTGGCTGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCSFTLS*DWLGAS
Trigger: GCTGGCACCCAGCCAGTCTCAGGACAGTGTGAATGA...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTACTGGGTCTATGTTCTaGAGTTACACTGCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: SNSSPQVSHHARPKNKESTGSMF*SYTAAS
Trigger: ACTAGCGGCAGTGTAACTGCAGAACATAGACCCAGT...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGAATTGGCAAAAGCCATaGCCGGGGGCGCGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLNWQKP*PGARWR
Trigger: GCGCCACCGCGCCCCCGGCCATGGCTTTTGCCAATT...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATAGGGCTGGATTTGAGCTaGCACAGACGCAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEIGLDLS*HRRKRE
Trigger: TTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGCCC...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CTGTCTGTCCCTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGCACAGAGAGCAAAACTaGTATTTTCGCAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: LSVPYTESTNTGHEEYRVHREQN*YFRKQE
Trigger: CTCCTGTTTGCGAAAATACCAGTTTTGCTCTCTGTG...CACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAGGGACAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTTTCCCAACGCTGGCCTaGCCTGGTAGAACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCFPTLA*PGRTGS
Trigger: AGACCCAGTTCTACCAGGCCAGGCCAGCGTTGGGAA...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATATGGGTCTGGTTCCGATaGTCTTCTTTCTGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEIWVWFR*SSFWSS
Trigger: GCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCA...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGAGTACGCGTATGTGTGTaGATTCACACCCATGTGCAG +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRVRVCV*IHTHVQ
Trigger: CTGCACATGGGTGTGAATGCACACACATACGCGTAC...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTCCCTCCTGTTTCACCTaGAGACAGGGTGGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCPSCFT*RQGGPE
Trigger: CTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGG...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGAACTGGGTCGGGTTTCTaGGTTCTTATCCAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRTGSGF*VLIQGY
Trigger: ATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGT...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGATGCTCCCGCTTCTTCTaGTTCAGATCCTCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRCSRFF*FRSSSR
Trigger: TCTGGAAGAGGATCTGAACCAGAAGAAGCGGGAGCA...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATATGCTATGGAGCAGACTaGGTTGTGGAAGCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEICYGAD*VVEASC
Trigger: ACACGAGGCTTCCACAACCCAGTCTGCTCCATAGCA...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATACTTCTGCCATGTTCCTaGGGCAGGGGCATTCCATTT +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEILLPCS*GRGIPF
Trigger: AAATGGAATGCCCCTGCCCCAGGAACATGGCAGAAG...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATAGACAGAACTCAATCATaGTCCACAGCTTCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEIDRTQS*STASRR
Trigger: ACGACGGGAAGCTGTGGATCATGATTGAGTTCTGTC...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGACTTTCTTCATCAGTTTaGGCTGCTCTTGGAACCTGG +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRLSSSV*AALGTW
Trigger: CCAGGTTCCAAGAGCAGCTCAAACTGATGAAGAAAG...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTTCCAGCTGCAGCTCATaGTTGTTACTCAGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCSSCSS*LLLSWV
Trigger: GACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGA...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTGCATTCACACCCATGTaGAGGAAGGGGGACGCGAGA +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCAFTPM*RKGDAR
Trigger: TCTCGCGTCCCCCTTCCTGCACATGGGTGTGAATGC...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTCAGGGTGGGCCAGAGTaGTATGGAGCAGACTGGGTT +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCQGGPE*YGADWV
Trigger: AACCCAGTCTGCTCCATAGCACTCTGGCCCACCCTG...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTAGGGCCTTCAGTTTCTaGGTTTCGTGCTCTACCAGG +
Preference number: 4 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCRAFSF*VSCSTR
Trigger: CCTGGTAGAGCACGAAACCCAGAAACTGAAGGCCCT...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGACATTCCTTCAGGTTCTaGTTATGGCTCTCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRHSFRF*LWLSSR
Trigger: CCTGGATGAGAGCCATAACCAGAACCTGAAGGAATG...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
3UTR CAA 72 bp CGGGAGAATCAGTTGAGCCACGAGTTTGAGATCAGCTaGGGCAACATATTAGAGACCCTGTCTCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: RENQLSHEFEIS*GNILETLSQRI
Trigger: AATTCTTTGAGACAGGGTCTCTAATATGTTGCCCAAGCTGATCTCAAACTCGTGGCTCAACTGATTCTCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGGAGGCTTGTCAGCATTaGGGCTTGGCGGACTCACCT +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLEACQH*GLADSP
Trigger: AGGTGAGTCCGCCAAGCCTCAATGCTGACAAGCCTC...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGACATTCCATTTCCCCCTaGTGCTTTTTCTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRHSISP*CFFFLK
Trigger: CTTCAGGAAGAAAAAGCATCAGGGGGAAATGGAATG...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATATGCATTTGCTCCAGCTaGAGCTCATGCTTGTTACTC +
Preference number: 4 (lower is better)
Translates to: ETGISPNTFSHARLHMEICICSS*SSCLLL
Trigger: GAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCA...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGATGCTTTCCTTCCGCTaGTGTCGGGGGAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLMLSFR*CRGSFS
Trigger: GGAGAAGCTCCCCCGACAGCAGCGGAAGGAAAGCAT...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTCCCCCGCCGTTGATGTaGAGGCTCTTCTTGTACATG +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCPPPLM*RLFLYM
Trigger: CATGTACAAGAAGAGCCTCCACATCAACGGCGGGGG...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTCAGCAGGAGTCCATCTaGGGTACAGAACCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCQQESI*GTEPVL
Trigger: AAGCACAGGTTCTGTACCTCAGATGGACTCCTGCTG...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGTGCCGCACCTTCAGCTaGTCTATCATGCGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLCRTFS*SIMRWL
Trigger: CAACCAGCGCATGATAGAGCAGCTGAAGGTGCGGCA...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTGGTCCTCCTTCTGCTTaGCTACAAAGTCCCGGTCAA +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCGPPSA*LQSPGQ
Trigger: TTGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACC...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGTTATATACATTCTGCAGCTGTAGAATCAGAATCTGGGGGAAGCCAACTGAGAAGGCTTTGTCTTAAGTaGAAAGCAAACTGGGAGAAC +
Preference number: 4 (lower is better)
Translates to: RYIHSAAVESESGGSQLRRLCLK*KANWEN
Trigger: GTTCTCCCAGTTTGCTTTCCACTTAAGACAAAGCCT...TCTCAGTTGGCTTCCCCCAGATTCTGATTCTACAGCTGCAGAATGTATATAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGTGGTACCATAGTCCATaGTCTCAGAGGTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLWYHSP*SQRCRG
Trigger: GCCTCTGCACCTCTGAGAGCATGGACTATGGTACCA...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR GCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGTGCCTCTTCTCCTCCTaGTGGGAGAACTGCTTGATC +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLCLFSS*WENCLI
Trigger: GATCAAGCAGTTCTCCCAGCAGGAGGAGAAGAGGCA...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGAGGGCTTCTAGCATCTaGCGGCAAACCACCTGTATC +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLRASSI*RQTTCI
Trigger: GATACAGGTGGTTTGCCGCCAGATGCTAGAAGCCCT...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR TCA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGTCACAGACTTTCACCTaGACCATGAAACTGGCATTT +
Preference number: 4 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLSQTFT*TMKLAF
Trigger: AAATGCCAGTTTCATGGTTCAGGTGAAAGTCTGTGA...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CCA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTAGTAAACCCGCATACTaGTTCAAACATTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: RILVQTFAFIALYTFCSCSKPAY*FKHLLL
Trigger: TAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACT...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp GCAGGATGCGGCGGAAATTGGCAAAAGCCATGGCCGGGGGCGCGGTaGCGCCGGCTCGGGCTCGGGCTCGGGCTCGGGCTGTGGCTTCGG +
Preference number: 5 (lower is better)
Translates to: AGCGGNWQKPWPGAR*RRLGLGLGLGLWLR
Trigger: CCGAAGCCACAGCCCGAGCCCGAGCCCGAGCCCGAGCCGGCGCCACCGCGCCCCCGGCCATGGCTTTTGCCAATTTCCGCCGCATCCTGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp AAACGCCTCCACGCGGCTCCCCGCCACGTCCTGCTGCAGTTCCGATaGCTACCGCGAGATGGCAGCAGCAACCCGGAACACAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: KRLHAAPRHVLLQFR*LPRDGSSNPEHRVQ
Trigger: CTGGACTCTGTGTTCCGGGTTGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCCGCGTGGAGGCGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS GCA 90 bp GCTCTTCCACAGAAAAACGCCTCCACGCGGCTCCCCGCCACGTCCTaGTGCAGTTCCGATGCCTACCGCGAGATGGCAGCAGCAACCCGG +
Preference number: 5 (lower is better)
Translates to: ALPQKNASTRLPATS*CSSDAYREMAAATR
Trigger: CCGGGTTGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCCGCGTGGAGGCGTTTTTCTGTGGAAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS-3UTR CAA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGGCGCTGCCCCCGCCGTaGATGTGGAGGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEALPPP*MWRLFL
Trigger: CAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGC...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATTGGGGTGGAGGGGTTaGGGCACTCCGCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRLGWRG*GTPPPR
Trigger: GCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCAA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGACTTGGCGGCCTTGCTaGGGGTGGAGGGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGETWRPC*GWRGLG
Trigger: GCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAGT...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 90 bp CTGGGGGACTGGTGGTTTGGAGGGATCTGTCCCCAGAGGGCTGGCTaGAGGGCTCATTCACACTGTCCTGAGACTGGCTGGGTGCCAGCG +
Preference number: 5 (lower is better)
Translates to: LGDWWFGGICPQRAG*RAHSHCPETGWVPA
Trigger: CGCTGGCACCCAGCCAGTCTCAGGACAGTGTGAATGAGCCCTGCAGCCAGCCCTCTGGGGACAGATCCCTCCAAACCACCAGTCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp GGCTGCCATTGGCCAGCTTCTCCCCACCCAAGGTCTCCAGGGCGCTaGTGTTGGGCCGGCTCTGGCTGGCCTTTTGAGATCTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: GCHWPASPHPRSPGR*CWAGSGWPFEICWL
Trigger: CAGCCAACAGATCTCAAAAGGCCAGCCAGAGCCGGCCCAACAGCAGCGCCCTGGAGACCTTGGGTGGGGAGAAGCTGGCCAATGGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp GGCAGCAGATCCGAGCCCCGTGCCACCGGCAGCCTCACCTTCTCATaGTTGCGCAGCAGCTCGTGCCGCTGGAGGAAGTACTGGTCTTTG +
Preference number: 5 (lower is better)
Translates to: GSRSEPRATGSLTFS*LRSSSCRWRKYWSL
Trigger: CAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGTGGCACGGGGCTCGGATCTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS GCA 90 bp CTTCCACAGAAAAACGCCTCCACGCGGCTCCCCGCCACGTCCTGCTaGAGTTCCGATGCCTACCGCGAGATGGCAGCAGCAACCCGGAAC +
Preference number: 5 (lower is better)
Translates to: LPQKNASTRLPATSC*SSDAYREMAAATRN
Trigger: GTTCCGGGTTGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCCGCGTGGAGGCGTTTTTCTGTGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS CCA 90 bp CATTGGCCAGCTTCTCCCCACCCAAGGTCTCCAGGGCGCTGCTGTTaGGCCGGCTCTGGCTGGCCTTTTGAGATCTGTTGGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HWPASPHPRSPGRCC*AGSGWPFEICWLLG
Trigger: GCCCAGCAGCCAACAGATCTCAAAAGGCCAGCCAGAGCCGGCCCAACAGCAGCGCCCTGGAGACCTTGGGTGGGGAGAAGCTGGCCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp GGCTCCCCGCCACGTCCTGCTGCAGTTCCGATGCCTACCGCGAGATaGCAGCAGCAACCCGGAACACAGAGTCCAGTAAGGCGTGCCGAT +
Preference number: 5 (lower is better)
Translates to: GSPPRPAAVPMPTAR*QQQPGTQSPVRRAD
Trigger: ATCGGCACGCCTTACTGGACTCTGTGTTCCGGGTTGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS CCA 90 bp ATCCAAAGTGTGCACCCAAGAGGTGCCCCATCACATACAGCCTCATaGCTCTCCCAGGTCGGCCCGGCAGCAGATCCGAGCCCCGTGCCA +
Preference number: 5 (lower is better)
Translates to: IQSVHPRGAPSHTAS*LSQVGPAADPSPVP
Trigger: TGGCACGGGGCTCGGATCTGCTGCCGGGCCGACCTGGGAGAGCCATGAGGCTGTATGTGATGGGGCACCTCTTGGGTGCACACTTTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS-3UTR CAA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGAGGACCCGCATGGGGTaGAGCTCGTGGTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQRTRMG*SSWCGG
Trigger: GCCGCCACACCACGAGCTCAACCCCATGCGGGTCCT...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGCGCTCCTTCTCATGCTaGCGCAGCAGCTCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVRSFSC*RSSSCR
Trigger: GCGGCACGAGCTGCTGCGCAAGCATGAGAAGGAGCG...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGATTGCGCGGCCGAAGCTaGTCCCGCCATTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRLRGRS*SRHSFR
Trigger: CCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAA...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCACAGCCCCGGGCGGTaGTTAAGAAGCATCCGCAGA +
Preference number: 5 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEHSPGR*LRSIRR
Trigger: TCTGCGGATGCTTCTTAACAACCGCCCGGGGCTGTG...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS TCA 90 bp TGGGAGGGTCCGACTTGGCGATCTTTAGCAGGACCCGCATGGGGTTaGGCTCGTGGTGTGGCGGCTCGATCTGGGCCATCTCAATCAGCG +
Preference number: 5 (lower is better)
Translates to: WEGPTWRSLAGPAWG*ARGVAARSGPSQSA
Trigger: CGCTGATTGAGATGGCCCAGATCGAGCCGCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGGACCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS TCA 90 bp CCCACAGGGCTGCTTCCCGGTCTCGAAGGAGCTCCTGCTTCTTCATaGGGCACTCGCGCTCCTTGTCACAGATCTCCCGCCTGTTGTCGG +
Preference number: 5 (lower is better)
Translates to: PTGLLPGLEGAPASS*GTRAPCHRSPACCR
Trigger: CCGACAACAGGCGGGAGATCTGTGACAAGGAGCGCGAGTGCCTCATGAAGAAGCAGGAGCTCCTTCGAGACCGGGAAGCAGCCCTGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000523615.1
CDS GCA 90 bp CCCACGATCTCCCACACCTCGTTGGGGTCCAGGTCGCGGCGGACGTaGTCATATTCGCGGGACTTTCTCTTCTCGAAGGTAGACAGGCGC +
Preference number: 5 (lower is better)
Translates to: PTISHTSLGSRSRRT*SYSRDFLFSKVDRR
Trigger: GCGCCTGTCTACCTTCGAGAAGAGAAAGTCCCGCGAATATGAGCACGTCCGCCGCGACCTGGACCCCAACGAGGTGTGGGAGATCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp CGTGCCACCGGCAGCCTCACCTTCTCATGCTTGCGCAGCAGCTCGTaGCGCTGGAGGAAGTACTGGTCTTTGAGCTGCTGCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: RATGSLTFSCLRSSS*RWRKYWSLSCCFTS
Trigger: GCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGTGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS GCA 90 bp GCTCCTCTTGGGGGCACTTGTCATCCAAAGTGTGCACCCAAGAGGTaGCCCATCACATACAGCCTCATGGCTCTCCCAGGTCGGCCCGGC +
Preference number: 5 (lower is better)
Translates to: APLGGTCHPKCAPKR*PITYSLMALPGRPG
Trigger: GCCGGGCCGACCTGGGAGAGCCATGAGGCTGTATGTGATGGGGCACCTCTTGGGTGCACACTTTGGATGACAAGTGCCCCCAAGAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGCGCTCCTTCTCATGCTaGCGCAGCAGCTCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQRSFSC*RSSSCR
Trigger: GCGGCACGAGCTGCTGCGCAAGCATGAGAAGGAGCG...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGTTGCGCGGCCGAAGCTaGTCCCGCCATTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGLRGRS*SRHSFR
Trigger: CCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAA...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGACTTGGCGGCCTTGCTaGGGGTGGAGGGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQTWRPC*GWRGLG
Trigger: GCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAGT...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGCACAGCCCCGGGCGGTaGTTAAGAAGCATCCGCAGA +
Preference number: 5 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRAHSPGR*LRSIRR
Trigger: TCTGCGGATGCTTCTTAACAACCGCCCGGGGCTGTG...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS TCA 90 bp CTCAGCAACTTGCTTCTCCTGGGCTACCTGAATTCTGGCATCCATTaGCACGGGTCGGGACTTCCGCAGGGGCACAGGCACTGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LSNLLLLGYLNSGIH*HGSGLPQGHRHCQA
Trigger: GGCCTGGCAGTGCCTGTGCCCCTGCGGAAGTCCCGACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAAGCAAGTTGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 90 bp GGCACTCGCGCTCCTTGTCACAGATCTCCCGCCTGTTGTCGGTGGTaGGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTCTGCTTGGCTA +
Preference number: 5 (lower is better)
Translates to: GTRAPCHRSPACCRW*ASSWPAPGPPSAWL
Trigger: TAGCCAAGCAGAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCACCACCGACAACAGGCGGGAGATCTGTGACAAGGAGCGCGAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000523603.1
ENST00000523615.1
CDS GCA 90 bp GCAGCCAGCCCTGGCTCCTCTTGGGGGCACTTGTCATCCAAAGTGTaGACCCAAGAGGTGCCCCATCACATACAGCCTCATGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: AASPGSSWGHLSSKV*TQEVPHHIQPHGSP
Trigger: GGGAGAGCCATGAGGCTGTATGTGATGGGGCACCTCTTGGGTGCACACTTTGGATGACAAGTGCCCCCAAGAGGAGCCAGGGCTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CCA 90 bp TCCGACTTGGCGATCTTTAGCAGGACCCGCATGGGGTTGAGCTCGTaGTGTGGCGGCTCGATCTGGGCCATCTCAATCAGCGTGATGCCC +
Preference number: 5 (lower is better)
Translates to: SDLAIFSRTRMGLSS*CGGSIWAISISVMP
Trigger: GGGCATCACGCTGATTGAGATGGCCCAGATCGAGCCGCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS CCA 90 bp ACCGGCAGCCTCACCTTCTCATGCTTGCGCAGCAGCTCGTGCCGCTaGAGGAAGTACTGGTCTTTGAGCTGCTGCTTCACCAGCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TGSLTFSCLRSSSCR*RKYWSLSCCFTSWC
Trigger: GCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CCA 90 bp CAGCTCCAGGTCCTCCTTCTGCTTGGCTACAAAGTCCCGGTCCTGTaGGGAGAGAGGAGGACAGGCCTTTATCCAGAGCCGGCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: QLQVLLLLGYKVPVL*GERRTGLYPEPAWA
Trigger: TGCCCAAGCCGGCTCTGGATAAAGGCCTGTCCTCCTCTCTCCCCACAGGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS-3UTR CAA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGAGGGTCATCAGCACGTaGCCAGCTTTCAGATCTCGG +
Preference number: 5 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGERVIST*PAFRSR
Trigger: CCGAGATCTGAAAGCTGGCAACGTGCTGATGACCCT...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGACTCCTCGAGAGGCTaGTCAGCATTGAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: SQERWGRSIRHSWGGTGRDSSRG*SALRLG
Trigger: GCCAAGCCTCAATGCTGACAAGCCTCTCGAGGAGTC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGTGGGGGACTGGTGGTTaGGAGGGATCTGTCCCCAGA +
Preference number: 5 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVWGTGG*EGSVPR
Trigger: TCTGGGGACAGATCCCTCCAAACCACCAGTCCCCCA...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGATGGCCATGCGCGTCTaGCCCTCACTCCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGMAMRV*PSLLWI
Trigger: GATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCAT...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGCTCGTGTTTCTGCTGTaGCTGCAGCCGCTCCGACTT +
Preference number: 5 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRALVFLL*LQPLRL
Trigger: AAGTCGGAGCGGCTGCAGCAACAGCAGAAACACGAG...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp GTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGCAGGGTTTTGCCATGTaGGCCAGGCTAGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: VRNAGAGLSGTVGVAQGEQGFAM*ARLVSN
Trigger: GTTCGAGACTAGCCTGGCCAACATGGCAAAACCCTG...CTCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGTCTCAGAGATGGGCATaGCACGGTGGCTCCACGGTG +
Preference number: 5 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVSQRWA*HGGSTV
Trigger: CACCGTGGAGCCACCGTGCAATGCCCATCTCTGAGA...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 90 bp ATTCACACTGTCCTGAGACTGGCTGGGTGCCAGCGGGGTGGAAGGTaGCTCCTCGAGAGGCTTGTCAGCATTGAGGCTTGGCGGACTCAC +
Preference number: 5 (lower is better)
Translates to: IHTVLRLAGCQRGGR*LLERLVSIEAWRTH
Trigger: GTGAGTCCGCCAAGCCTCAATGCTGACAAGCCTCTCGAGGAGTCACCTTCCACCCCGCTGGCACCCAGCCAGTCTCAGGACAGTGTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp TGGAGAGATTGGTACCATAGTCCATGCTCTCAGAGGTGCAGAGGCTaGTGCAGTCCGAGTCCCTCTTGGAAGGCCCTGGAGCTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: WRDWYHSPCSQRCRG*CSPSPSWKALELPG
Trigger: CCCAGGCAGCTCCAGGGCCTTCCAAGAGGGACTCGGACTGCAGCAGCCTCTGCACCTCTGAGAGCATGGACTATGGTACCAATCTCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517775.1
CDS GCA 90 bp CGCTGGAGGAAGTACTGGTCTTTGAGCTGCTGCTTCACCAGCTGGTaGCTCTCCTGCAGCTGGTGCTCTTCCATCTCCCACAGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: RWRKYWSLSCCFTSW*LSCSWCSSISHRAA
Trigger: AGCAGCCCTGTGGGAGATGGAAGAGCACCAGCTGCAGGAGAGGCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000519269.1
ENST00000520476.1
ENST00000523615.1
CDS GCA 90 bp GCCGCGCCTTTTCCTGTTGCTGCCGCACCTTCAGCTGCTCTATCATaGGCTGGTTGTAGCGCTGCATCTGCTCCCGCTCCTTCTCATGCT +
Preference number: 5 (lower is better)
Translates to: AAPFPVAAAPSAALS*AGCSAASAPAPSHA
Trigger: AGCATGAGAAGGAGCGGGAGCAGATGCAGCGCTACAACCAGCGCATGATAGAGCAGCTGAAGGTGCGGCAGCAACAGGAAAAGGCGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 90 bp CTCCTCCTGCTGGGAGAACTGCTTGATCTTCTCACGCTGCTCAGCTaGGCTGCCCCCGCCGTTGATGTGGAGGCTCTTCTTGTACATGGC +
Preference number: 5 (lower is better)
Translates to: LLLLGELLDLLTLLS*AAPAVDVEALLVHG
Trigger: GCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAGCAGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 90 bp CCGGTCCTAAGGAAGACGCTGCTCACAGGTAACAGCTGCTGTGCATaGTTGTCCCGGTGGCCTGTTGGAACTGTGCTTCCCTTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PVLRKTLLTGNSCCA*LSRWPVGTVLPFPA
Trigger: GGCAGGGAAGGGAAGCACAGTTCCAACAGGCCACCGGGACAAGCATGCACAGCAGCTGTTACCTGTGAGCAGCGTCTTCCTTAGGACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS GCA 90 bp TTGTCGGTGGTGAGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTCTaGTTGGCTACAAAGTCCCGGTCCTGTGGGGAGAGAGGAGGACAG +
Preference number: 5 (lower is better)
Translates to: LSVVSLFMASSRSSF*LATKSRSCGERGGQ
Trigger: CTGTCCTCCTCTCTCCCCACAGGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCACCACCGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS CCA 90 bp AGGAAGTTGAGGGCTTCTAGCATCTGGCGGCAAACCACCTGTATCTaGGGCTCCGTGAGGCCTCTGTCCAGCTCCAGCATGATGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RKLRASSIWRQTTCI*GSVRPLSSSSMMAS
Trigger: GGACGCCATCATGCTGGAGCTGGACAGAGGCCTCACGGAGCCCCAGATACAGGTGGTTTGCCGCCAGATGCTAGAAGCCCTCAACTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000519710.1
CDS CCA 90 bp TCCTTCTCATGCTTGCGCAGCAGCTCGTGCCGCTGGAGGAAGTACTaGTCTTTGAGCTGCTGCTTCACCAGCTGGTGCCTCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SFSCLRSSSCRWRKY*SLSCCFTSWCLSCS
Trigger: GCTGCAGGAGAGGCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000520476.1
ENST00000523615.1
CDS CCA 90 bp TTGATCTTCTCACGCTGCTCAGCTGCGCTGCCCCCGCCGTTGATGTaGAGGCTCTTCTTGTACATGGCCATGCGCGTCTTGCCCTCACTC +
Preference number: 5 (lower is better)
Translates to: LIFSRCSAALPPPLM*RLFLYMAMRVLPSL
Trigger: GAGTGAGGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGATCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CCA 90 bp AGAAGCATCCGCAGAACTGTAGGGGAAGAACTTGGCGGCCTTGCTTaGGGTGGAGGGGTTTGGGCACTCCGCCTCCTCGCTCAGCTTGAA +
Preference number: 5 (lower is better)
Translates to: RSIRRTVGEELGGLA*GGGVWALRLLAQLE
Trigger: TTCAAGCTGAGCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAGTTCTTCCCCTACAGTTCTGCGGATGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CCA 90 bp ACCTTCTCATGCTTGCGCAGCAGCTCGTGCCGCTGGAGGAAGTACTaGTCTTTGAGCTGCTGCTTCACCAGCTGGTGCCTCTCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: TFSCLRSSSCRWRKY*SLSCCFTSWCLSCS
Trigger: GCTGCAGGAGAGGCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CCA 90 bp CCTCTTCCAGAGCCTGAGTTGAGATTGCGCCACTGCACTCCAACTTaGGCGACGGTGCGAGACTCCATCTTCTTGCGCGGCCGAAGCTTG +
Preference number: 5 (lower is better)
Translates to: PLPEPELRLRHCTPT*ATVRDSIFLRGRSL
Trigger: CAAGCTTCGGCCGCGCAAGAAGATGGAGTCTCGCACCGTCGCCCAAGTTGGAGTGCAGTGGCGCAATCTCAACTCAGGCTCTGGAAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS-3UTR CAA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTCGGTGGATGATCCTCTaGCTGTGCAGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GAEANSPPVSPADRVGQSRWMIL*LCRKLR
Trigger: CCTCAACTTCCTGCACAGCAAGAGGATCATCCACCG...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTGGGAGGGTCCGACTaGGCGATCTTTAGCAGGACC +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQVGGSD*AIFSRT
Trigger: GGTCCTGCTAAAGATCGCCAAGTCGGACCCTCCCAC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGAGCTCCCGCAGAGCCTaGTTACTGGTGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQSSRRA*LLVMLL
Trigger: CAGCAGCATCACCAGTAACAAGGCTCTGCGGGAGCT...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGATGGCCATGCGCGTCTaGCCCTCACTCCTCTGGATC +
Preference number: 5 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRMAMRV*PSLLWI
Trigger: GATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCAT...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGTGCAGCTCGCTCATGTaGCTCTCACACTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQCSSLM*LSHCAS
Trigger: GCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGCA...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTGCAGCTCGCTCATGTaGCTCTCACACTGCGCCAGC +
Preference number: 5 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRCSSLM*LSHCAS
Trigger: GCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGCA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGTCTTCCAGAGCCTTCTaGCGCGGCCGAAGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRSSRAF*RGRSLS
Trigger: GGACAAGCTTCGGCCGCGCAAGAAGGCTCTGGAAGA...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCCTCCTCGCTCAGCTaGAAGAACATCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVASSLS*KNISCS
Trigger: GGAGCAGGAGATGTTCTTCAAGCTGAGCGAGGAGGC...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGAGAGCCTGAGTTGAGATaGCGCCACTGCACTCCAACT +
Preference number: 5 (lower is better)
Translates to: SQERWGRSIRHSWGGTGREPELR*RHCTPT
Trigger: AGTTGGAGTGCAGTGGCGCAATCTCAACTCAGGCTC...TCGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS GCA 90 bp TGCATGCTTGTCCCGGTGGCCTGTTGGAACTGTGCTTCCCTTCCCTaGCTAAAGCTGATTGGCCGTTGCGGCTCCTGTCACTCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: CMLVPVACWNCASLP*LKLIGRCGSCHSPL
Trigger: CAAAGGGGAGTGACAGGAGCCGCAACGGCCAATCAGCTTTAGGCAGGGAAGGGAAGCACAGTTCCAACAGGCCACCGGGACAAGCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS GCA 90 bp GTAACAGCTGCTGTGCATGCTTGTCCCGGTGGCCTGTTGGAACTGTaGTTCCCTTCCCTGCCTAAAGCTGATTGGCCGTTGCGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VTAAVHACPGGLLEL*FPSLPKADWPLRLL
Trigger: CAGGAGCCGCAACGGCCAATCAGCTTTAGGCAGGGAAGGGAAGCACAGTTCCAACAGGCCACCGGGACAAGCATGCACAGCAGCTGTTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CCA 90 bp AGCTCGCTCATGTTGCTCTCACACTGCGCCAGCATGTCCCGCATCTaGTTCTCGTGTTTCTGCTGTTGCTGCAGCCGCTCCGACTTCTGC +
Preference number: 5 (lower is better)
Translates to: SSLMLLSHCASMSRI*FSCFCCCCSRSDFC
Trigger: GCAGAAGTCGGAGCGGCTGCAGCAACAGCAGAAACACGAGAACCAGATGCGGGACATGCTGGCGCAGTGTGAGAGCAACATGAGCGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CCA 90 bp CAGAGTGGGAGGGGAATCCACTCACCTCCAGCAGCTGCGCGGCACTaGGTCGGGTTTCTGGGTTCTTATCCAGGGCTATCTTCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: QSGRGIHSPPAAARH*VGFLGSYPGLSSGS
Trigger: ACTTCCTGAAGATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGCTGGAGGTGAGTGGATTCCCCTCCCACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517527.1
CDS-3UTR CAA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGAGAGGCTTGTCAGCATaGAGGCTTGGCGGACTCACC +
Preference number: 5 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQRGLSA*RLGGLT
Trigger: GGTGAGTCCGCCAAGCCTCAATGCTGACAAGCCTCT...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GGGGCAGAGGCAAACAGCCCTCCTGTTTCACCTGCAGACAGGGTGGGCCAGAGTCTCCATCTTCTCCACTaGCTGCTTTTGCTGACGCTC +
Preference number: 5 (lower is better)
Translates to: GAEANSPPVSPADRVGQSLHLLH*LLLLTL
Trigger: GAGCGTCAGCAAAAGCAGCAAGTGGAGAAGATGGAG...ACTCTGGCCCACCCTGTCTGCAGGTGAAACAGGAGGGCTGTTTGCCTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGGCGCTGCCCCCGCCGTaGATGTGGAGGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LIQKALTQGTRNTAWASQALPPP*MWRLFL
Trigger: CAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGC...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGCGTGCTGGGAGAACTGCTaGATCTTCTCACGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KSGTLGQVYQAQLGWHRACWENC*IFSRCS
Trigger: TGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAGCA...CGCCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGCCTCCTCGCTCAGCTaGAAGAACATCTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQASSLS*KNISCS
Trigger: GGAGCAGGAGATGTTCTTCAAGCTGAGCGAGGAGGC...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp GCCAGCTGCAGGCCTGGCTCCTCTGGGAACAGAAATGGCTGTGAGGGACTTGATAAGAACTTGGCGGCCTaGCTTGGGGTGGAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: ASCRPGSSGNRNGCEGLDKNLAA*LGVEGF
Trigger: AAACCCCTCCACCCCAAGCAAGGCCGCCAAGTTCTT...ATCAAGTCCCTCACAGCCATTTCTGTTCCCAGAGGAGCCAGGCCTGCAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGAAGAACTTGGCGGCCTaGCTTGGGGTGGAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: KKSGTLGQVYQAQLGWHRKNLAA*LGVEGF
Trigger: AAACCCCTCCACCCCAAGCAAGGCCGCCAAGTTCTT...CCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS TCA 90 bp GTGCCAGCGGGGTGGAAGGTGACTCCTCGAGAGGCTTGTCAGCATTaGGGCTTGGCGGACTCACCTCAGAGGAGTTCTGAGTATGGTTCT +
Preference number: 5 (lower is better)
Translates to: VPAGWKVTPREACQH*GLADSPQRSSEYGS
Trigger: AGAACCATACTCAGAACTCCTCTGAGGTGAGTCCGCCAAGCCTCAATGCTGACAAGCCTCTCGAGGAGTCACCTTCCACCCCGCTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 90 bp CCAGGCAGAACAGGTGAGAAATCAGAAGACGCAGGCCCTGAAGACTaGGACACACCTCACGCTGTGGCTACGAGGGCACCAGCATCGTTC +
Preference number: 5 (lower is better)
Translates to: PGRTGEKSEDAGPED*DTPHAVATRAPASF
Trigger: GAACGATGCTGGTGCCCTCGTAGCCACAGCGTGAGGTGTGTCTCAGTCTTCAGGGCCTGCGTCTTCTGATTTCTCACCTGTTCTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517360.1
CDS GCA 90 bp ACAGGTCAGTGGAGAGATTGGTACCATAGTCCATGCTCTCAGAGGTaGAGAGGCTGCTGCAGTCCGAGTCCCTCTTGGAAGGCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: TGQWRDWYHSPCSQR*RGCCSPSPSWKALE
Trigger: CTCCAGGGCCTTCCAAGAGGGACTCGGACTGCAGCAGCCTCTGCACCTCTGAGAGCATGGACTATGGTACCAATCTCTCCACTGACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517775.1
CDS GCA 90 bp TCCAGCTGCAGCTCATGCTTGTTACTCAGCTGGGTCTGGTTCCGATaGTCTTCTTTCTGGAGCAGCCGAAGCTCTCGGAGTTCCTGGCGC +
Preference number: 5 (lower is better)
Translates to: SSCSSCLLLSWVWFR*SSFWSSRSSRSSWR
Trigger: GCGCCAGGAACTCCGAGAGCTTCGGCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp GAGGCCTCTGTCCAGCTCCAGCATGATGGCGTCCACGGCTCCCCCTaGACAGAACTCAATCATGATCCACAGCTTCCCGTCGTGATAGTA +
Preference number: 5 (lower is better)
Translates to: EASVQLQHDGVHGSP*TELNHDPQLPVVIV
Trigger: TACTATCACGACGGGAAGCTGTGGATCATGATTGAGTTCTGTCCAGGGGGAGCCGTGGACGCCATCATGCTGGAGCTGGACAGAGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000519710.1
CDS CCA 90 bp TGGATGATCCTCTTGCTGTGCAGGAAGTTGAGGGCTTCTAGCATCTaGCGGCAAACCACCTGTATCTGGGGCTCCGTGAGGCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: WMILLLCRKLRASSI*RQTTCIWGSVRPLS
Trigger: GGACAGAGGCCTCACGGAGCCCCAGATACAGGTGGTTTGCCGCCAGATGCTAGAAGCCCTCAACTTCCTGCACAGCAAGAGGATCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000519710.1
CDS CCA 90 bp GACGAAGGGATGCTCCAGCAGCTGCGCGGCACTGGGTCGGGTTTCTaGGTTCTTATCCAGGGCTATCTTCAGGAAGTCACGGAACTCTAC +
Preference number: 5 (lower is better)
Translates to: DEGMLQQLRGTGSGF*VLIQGYLQEVTELY
Trigger: GTAGAGTTCCGTGACTTCCTGAAGATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGCTGGAGCATCCCTTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517524.5
CDS CCA 90 bp GCCTTCTTGCGCGGCCGAAGCTTGTCCCGCCATTCCTTCAGGTTCTaGTTATGGCTCTCATCCAGGGCCTTCAGTTTCTGGGTTTCGTGC +
Preference number: 5 (lower is better)
Translates to: AFLRGRSLSRHSFRF*LWLSSRAFSFWVSC
Trigger: GCACGAAACCCAGAAACTGAAGGCCCTGGATGAGAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517360.1
CDS CCA 90 bp CTTGGACATTCAGGGTCAAGGGCCACCACGAGCCACTGTCGGGGTTaGCAGCACTCCCGAATCATGATCTGCGTGACTTTGCATCCCACT +
Preference number: 5 (lower is better)
Translates to: LGHSGSRATTSHCRG*QHSRIMICVTLHPT
Trigger: AGTGGGATGCAAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACCCCGACAGTGGCTCGTGGTGGCCCTTGACCCTGAATGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS-3UTR CAA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGAATTCTGGCATCCATaGACACGGGTCGGGACTTCC +
Preference number: 5 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQEFWHP*TRVGTS
Trigger: GGAAGTCCCGACCCGTGTCAATGGATGCCAGAATTC...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGGCTCAGTACAGTTTCGGGTCCTaGATGGACAGAGAGCCCATC +
Preference number: 5 (lower is better)
Translates to: PHVPHQLLHLTCSVAQAQYSFGS*MDREPI
Trigger: GATGGGCTCTCTGTCCATCAAGGACCCGAAACTGTA...CTGAGCCTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GGTGCCAACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGCCATCCACCACAAATTaGCGTGTCCGCTTGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GANTPHVPHQLLHLTCSVPSTTN*RVRLRV
Trigger: AACCCTCAAGCGGACACGCAAATTTGTGGTGGATGG...CACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACCAGATCTCCCGCCTGTaGTCGGTGGTGAGCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHQISRL*SVVSLF
Trigger: GAAGAGGCTCACCACCGACAACAGGCGGGAGATCTG...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGAGGAAGTACTGGTCTTaGAGCTGCTGCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGRKYWS*SCCFTS
Trigger: GCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCT...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGATGTGGAGGCTCTTCTaGTACATGGCCATGCGCGTC +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQMWRLF*YMAMRV
Trigger: GACGCGCATGGCCATGTACAAGAAGAGCCTCCACAT...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGCTTCCAGAGCCTGAGTaGAGATTGCGCCACTGCACT +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQLPEPE*RLRHCT
Trigger: AGTGCAGTGGCGCAATCTCAACTCAGGCTCTGGAAG...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS GCA 90 bp TCCCGGTCAAGAAGCTGCTTTTTCTGCGTGTGCTCCTCCATCTTCTaGTTCATGCTTTCCTTCCGCTGCTGTCGGGGGAGCTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SRSRSCFFCVCSSIF*FMLSFRCCRGSFST
Trigger: GGTGGAGAAGCTCCCCCGACAGCAGCGGAAGGAAAGCATGAAGCAGAAGATGGAGGAGCACACGCAGAAAAAGCAGCTTCTTGACCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp GGGTTTGGGCACTCCGCCTCCTCGCTCAGCTTGAAGAACATCTCCTaGTCCCGCTTCTTCTGGTTCAGATCCTCTTCCAGAGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GFGHSASSLSLKNIS*SRFFWFRSSSRAFL
Trigger: CAAGAAGGCTCTGGAAGAGGATCTGAACCAGAAGAAGCGGGAGCAGGAGATGTTCTTCAAGCTGAGCGAGGAGGCGGAGTGCCCAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517360.1
CDS GCA 90 bp ACCACGAGCCACTGTCGGGGTTGGCAGCACTCCCGAATCATGATCTaGGTGACTTTGCATCCCACTGTCTTCCTTAGGACGCTCTTCCAC +
Preference number: 5 (lower is better)
Translates to: TTSHCRGWQHSRIMI*VTLHPTVFLRTLFH
Trigger: GTGGAAGAGCGTCCTAAGGAAGACAGTGGGATGCAAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACCCCGACAGTGGCTCGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS GCA 90 bp TCTGGTTCAGATCCTCTTCCAGAGCCTGAGTTGAGATTGCGCCACTaGACTCCAACTTGGGCGACGGTGCGAGACTCCATCTTCTTGCGC +
Preference number: 5 (lower is better)
Translates to: SGSDPLPEPELRLRH*TPTWATVRDSIFLR
Trigger: GCGCAAGAAGATGGAGTCTCGCACCGTCGCCCAAGTTGGAGTGCAGTGGCGCAATCTCAACTCAGGCTCTGGAAGAGGATCTGAACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS CCA 90 bp GATAGTAGGCTCCCAGGAGCTTCACAATGTAGGGGTGGTCGCAGGTaGCCAGGATCTCAATCTCCACGATGTAGTCCTCCAGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: DSRLPGASQCRGGRR*PGSQSPRCSPPAPP
Trigger: AGGAGGAGCTGGAGGACTACATCGTGGAGATTGAGATCCTGGCCACCTGCGACCACCCCTACATTGTGAAGCTCCTGGGAGCCTACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp TTGCGCGGCCGAAGCTTGTCCCGCCATTCCTTCAGGTTCTGGTTATaGCTCTCATCCAGGGCCTTCAGTTTCTGGGTTTCGTGCTCTACC +
Preference number: 5 (lower is better)
Translates to: LRGRSLSRHSFRFWL*LSSRAFSFWVSCST
Trigger: GGTAGAGCACGAAACCCAGAAACTGAAGGCCCTGGATGAGAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CCA 90 bp GAATCCACTCACCTCCAGCAGCTGCGCGGCACTGGGTCGGGTTTCTaGGTTCTTATCCAGGGCTATCTTCAGGAAGTCACGGAACTCTAC +
Preference number: 5 (lower is better)
Translates to: ESTHLQQLRGTGSGF*VLIQGYLQEVTELY
Trigger: GTAGAGTTCCGTGACTTCCTGAAGATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGCTGGAGGTGAGTGGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517527.1
CDS-3UTR CAA 90 bp AACACCCCGCACGTGCCACACCAACTGCTCCACCTAACATGCTCAGTGGCACAGAGGAAGTACTGGTCTTaGAGCTGCTGCTTCACCAGC +
Preference number: 5 (lower is better)
Translates to: NTPHVPHQLLHLTCSVAQRKYWS*SCCFTS
Trigger: GCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCT...CTGTGCCACTGAGCATGTTAGGTGGAGCAGTTGGTGTGGCACGTGCGGGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGTCACTCCTCTGGATCTaGGGCAGCCGCGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMSLLWI*GSRAFS
Trigger: GGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTGA...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS-3UTR CAA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTTTGGGGTGGAGGGGTTaGGGCACTCCGCCTCCTCGC +
Preference number: 5 (lower is better)
Translates to: SNSSPQVSHHARPKNKESLGWRG*GTPPPR
Trigger: GCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCAA...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGCGAGACTCCATCTTCTaGCGCGGCCGAAGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMRDSIF*RGRSLS
Trigger: GGACAAGCTTCGGCCGCGCAAGAAGATGGAGTCTCG...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS GCA 90 bp TTGTCGGTGGTGAGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTCTaGTTGGCTACAAAGTCCCGGTCAAGAAGCTGCTTTTTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: LSVVSLFMASSRSSF*LATKSRSRSCFFCV
Trigger: CACGCAGAAAAAGCAGCTTCTTGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCACCACCGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp GGACTCACAAGAAGCTGCTTTTTCTGCGTGTGCTCCTCCATCTTCTaGTTCATGCTTTCCTTCCGCTGCTGTCGGGGGAGCTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: GLTRSCFFCVCSSIF*FMLSFRCCRGSFST
Trigger: GGTGGAGAAGCTCCCCCGACAGCAGCGGAAGGAAAGCATGAAGCAGAAGATGGAGGAGCACACGCAGAAAAAGCAGCTTCTTGTGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000522879.1
CDS CCA 90 bp ATCTTCTTGCGCGGCCGAAGCTTGTCCCGCCATTCCTTCAGGTTCTaGTTATGGCTCTCATCCAGGGCCTTCAGTTTCTGGGTTTCGTGC +
Preference number: 5 (lower is better)
Translates to: IFLRGRSLSRHSFRF*LWLSSRAFSFWVSC
Trigger: GCACGAAACCCAGAAACTGAAGGCCCTGGATGAGAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS-3UTR CAA 90 bp AGTCCAACAGACTGCCAGCCCAGGTCTGAAATGCAAGGTGGGACTCCTGAACACAGCTGCAGCTCATGCTaGTTACTCAGCTGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SPTDCQPRSEMQGGTPEHSCSSC*LLSWVW
Trigger: CCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCT...GTGTTCAGGAGTCCCACCTTGCATTTCAGACCTGGGCTGGCAGTCTGTTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGCTCGTGTTTCTGCTGTaGCTGCAGCCGCTCCGACTT +
Preference number: 5 (lower is better)
Translates to: LIQKALTQGTRNTAWASQLVFLL*LQPLRL
Trigger: AAGTCGGAGCGGCTGCAGCAACAGCAGAAACACGAG...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGAACACCCATTCCTCTaGGACCCTGACCCCACCAAC +
Preference number: 5 (lower is better)
Translates to: YTESTNTGHEEYRVGLSEEHPFL*DPDPTN
Trigger: GTTGGTGGGGTCAGGGTCCAAGAGGAATGGGTGTTC...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp TTCTGCGTGTGCTCCTCCATCTTCTGCTTCATGCTTTCCTTCCGCTaGTGTCGGGGGAGCTTCTCCACCTCGTTCTTCACCTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: FCVCSSIFCFMLSFR*CRGSFSTSFFTSFF
Trigger: GAAGAAAGAGGTGAAGAACGAGGTGGAGAAGCTCCCCCGACAGCAGCGGAAGGAAAGCATGAAGCAGAAGATGGAGGAGCACACGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000522879.1
CDS GCA 90 bp TTTTCATTCTGCAGCTGCTGCAGCTCGCTCATGTTGCTCTCACACTaGGCCAGCATGTCCCGCATCTGGTTCTCGTGTTTCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: FSFCSCCSSLMLLSH*ASMSRIWFSCFCCC
Trigger: GCAACAGCAGAAACACGAGAACCAGATGCGGGACATGCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGCAGCAGCTGCAGAATGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CCA 90 bp TCATGCTTGTTACTCAGCTGGGTCTGGTTCCGATGCTCTTCTTTCTaGAGCAGCCGAAGCTCTCGGAGTTCCTGGCGCCTGAGAAATCTC +
Preference number: 5 (lower is better)
Translates to: SCLLLSWVWFRCSSF*SSRSSRSSWRLRNL
Trigger: GAGATTTCTCAGGCGCCAGGAACTCCGAGAGCTTCGGCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp TGCATTTGCTCCAGCTGCAGCTCATGCTTGTTACTCAGCTGGGTCTaGTTCCGATGCTCTTCTTTCTGGAGCAGCCGAAGCTCTCGGAGT +
Preference number: 5 (lower is better)
Translates to: CICSSCSSCLLLSWV*FRCSSFWSSRSSRS
Trigger: ACTCCGAGAGCTTCGGCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp AAGGGACAACATAGGGCTAAGAATCTGGCCTTTACAGGTGCTTCTTaGACATTCAGGGTCAAGGGCCACCACGAGCCACTGTCGGGGTTG +
Preference number: 5 (lower is better)
Translates to: KGQHRAKNLAFTGAS*TFRVKGHHEPLSGL
Trigger: CAACCCCGACAGTGGCTCGTGGTGGCCCTTGACCCTGAATGTCCAAGAAGCACCTGTAAAGGCCAGATTCTTAGCCCTATGTTGTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS CCA 90 bp GGGGCCATCCTGAACCAACCAAGGGACAACATAGGGCTAAGAATCTaGCCTTTACAGGTGCTTCTTGGACATTCAGGGTCAAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: GAILNQPRDNIGLRI*PLQVLLGHSGSRAT
Trigger: GGTGGCCCTTGACCCTGAATGTCCAAGAAGCACCTGTAAAGGCCAGATTCTTAGCCCTATGTTGTCCCTTGGTTGGTTCAGGATGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518267.5
ENST00000521322.1
CDS-3UTR CAA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGGTCCTCCTTCTGCTaGGCTACAAAGTCCCGGTCA +
Preference number: 5 (lower is better)
Translates to: LIQKALTQGTRNTAWASQRSSFC*ATKSRS
Trigger: TGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCT...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CTTATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGATGTGGAGGCTCTTCTaGTACATGGCCATGCGCGTC +
Preference number: 5 (lower is better)
Translates to: LIQKALTQGTRNTAWASQMWRLF*YMAMRV
Trigger: GACGCGCATGGCCATGTACAAGAAGAGCCTCCACAT...CTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 90 bp TCTCCACGATGTAGTCCTCCAGCTCCTCCTCACTCTTGGTTTCAATaGCTTTGGCCGCAGCCAAAGCACCCGTCTCCTTATTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: SPRCSPPAPPHSWFQ*LWPQPKHPSPYSWP
Trigger: AGGCCAAGAATAAGGAGACGGGTGCTTTGGCTGCGGCCAAAGTCATTGAAACCAAGAGTGAGGAGGAGCTGGAGGACTACATCGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp TGCTTGGCTACAAAGTCCCGGTCAAGAAGCTGCTTTTTCTGCGTGTaGTCCTCCATCTTCTGCTTCATGCTTTCCTTCCGCTGCTGTCGG +
Preference number: 5 (lower is better)
Translates to: CLATKSRSRSCFFCV*SSIFCFMLSFRCCR
Trigger: CCGACAGCAGCGGAAGGAAAGCATGAAGCAGAAGATGGAGGAGCACACGCAGAAAAAGCAGCTTCTTGACCGGGACTTTGTAGCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp GATCCTGGATCAAAGAACAGTCTCGGTCTGTCACCAGAGCTGGAGTaGAGTGGCATGATCTCGGCTCACTGCAACCTCTGTGATAACTCC +
Preference number: 5 (lower is better)
Translates to: DPGSKNSLGLSPELE*SGMISAHCNLCDNS
Trigger: GGAGTTATCACAGAGGTTGCAGTGAGCCGAGATCATGCCACTGCACTCCAGCTCTGGTGACAGACCGAGACTGTTCTTTGATCCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523603.1
CDS-3UTR CAA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTAGGATGCGGCGGAAATaGGCAAAAGCCATGGCCGGG +
Preference number: 5 (lower is better)
Translates to: SNSSPQVSHHARPKNKESRMRRK*AKAMAG
Trigger: CCCGGCCATGGCTTTTGCCAATTTCCGCCGCATCCT...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATAATCTCCCACACCTCGTaGGGGTCCAGGTCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: ETGISPNTFSHARLHMEIISHTS*GSRSRR
Trigger: CCGCCGCGACCTGGACCCCAACGAGGTGTGGGAGAT...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CAAGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGAAAACGTTTATGCATTaGCTCCAGCTGCAGCTCATG +
Preference number: 5 (lower is better)
Translates to: QEVRNAGAGLSGTVGVAQKTFMH*LQLQLM
Trigger: CATGAGCTGCAGCTGGAGCAAATGCATAAACGTTTT...CTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp TGTTGGAACTGTGCTTCCCTTCCCTGCCTAAAGCTGATTGGCCGTTaGGGCTCCTGTCACTCCCCTTTGCTTAGCAAATATGTTCGAGTC +
Preference number: 5 (lower is better)
Translates to: CWNCASLPCLKLIGR*GSCHSPLLSKYVRV
Trigger: GACTCGAACATATTTGCTAAGCAAAGGGGAGTGACAGGAGCCGCAACGGCCAATCAGCTTTAGGCAGGGAAGGGAAGCACAGTTCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CCA 90 bp CGTTTATGCATTTGCTCCAGCTGCAGCTCATGCTTGTTACTCAGCTaGGTCTGGTTCCGATGCTCTTCTTTCTGGAGCAGCCGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: RLCICSSCSSCLLLS*VWFRCSSFWSSRSS
Trigger: AGAGCTTCGGCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCATAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp AGAAAGAGACATACACAGCAAGTAACAGTCAGTGAGGGAGCCACTTaGGCCATTGGCTTCCCTGCATCGTTTCCCCTATTCCTAGCCCCT +
Preference number: 5 (lower is better)
Translates to: RKRHTQQVTVSEGAT*AIGFPASFPLFLAP
Trigger: AGGGGCTAGGAATAGGGGAAACGATGCAGGGAAGCCAATGGCCCAAGTGGCTCCCTCACTGACTGTTACTTGCTGTGTATGTCTCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS-3UTR CAA 90 bp TATACAGAAAGCACTAACACAGGGCACGAGGAATACCGCGTGGGCCTCTCAGAGAGCTCCTCCTCACTCTaGGTTTCAATGACTTTGGCC +
Preference number: 5 (lower is better)
Translates to: YTESTNTGHEEYRVGLSESSSSL*VSMTLA
Trigger: GGCCAAAGTCATTGAAACCAAGAGTGAGGAGGAGCT...CTCTGAGAGGCCCACGCGGTATTCCTCGTGCCCTGTGTTAGTGCTTTCTGTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTACCCTGCTCAGCAACTaGCTTCTCCTGGGCTACCTG +
Preference number: 5 (lower is better)
Translates to: SNSSPQVSHHARPKNKESTLLSN*LLLGYL
Trigger: CAGGTAGCCCAGGAGAAGCAAGTTGCTGAGCAGGGT...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AGAAGTCAGGAACGCTGGGGCAGGTCTATCAGGCACAGTTGGGGTGGCACAGGGAACTTCTTCTTGGCGTaGATTTCCTGTTCAAAACGT +
Preference number: 5 (lower is better)
Translates to: RSQERWGRSIRHSWGGTGNFFLA*ISCSKR
Trigger: ACGTTTTGAACAGGAAATCAACGCCAAGAAGAAGTT...CCCTGTGCCACCCCAACTGTGCCTGATAGACCTGCCCCAGCGTTCCTGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp TCGAACTCCTCACCTCAGGTGAGTCACCATGCCCGGCCTAAAAATAAAGAATCTCCCATCCCTTCCAGCTaGAAGGGATCTGGGGCTCAA +
Preference number: 5 (lower is better)
Translates to: SNSSPQVSHHARPKNKESPIPSS*KGSGAQ
Trigger: TTGAGCCCCAGATCCCTTCAAGCTGGAAGGGATGGG...AGATTCTTTATTTTTAGGCCGGGCATGGTGACTCACCTGAGGTGAGGAGTTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTCAGTCCGAGTCCCTCTaGGAAGGCCCTGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCQSESL*EGPGAA
Trigger: GGCAGCTCCAGGGCCTTCCAAGAGGGACTCGGACTG...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 90 bp CGCACGGCATGGTCTTGCTCCATCTTCTCCACTTGCTGCTTTTGCTaGCGCTCCAGGTTCTCTAATTCCGTGTCAAAGAACTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RTAWSCSIFSTCCFC*RSRFSNSVSKNFFL
Trigger: CAAGAAGAAGTTCTTTGACACGGAATTAGAGAACCTGGAGCGTCAGCAAAAGCAGCAAGTGGAGAAGATGGAGCAAGACCATGCCGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 90 bp AGAGACGCATCAACCAATTTCAACATGTGGGCTTCATCTGGATCCTaGATCAAAGAACAGTCTCGGTCTGTCACCAGAGCTGGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: RDASTNFNMWASSGS*IKEQSRSVTRAGVQ
Trigger: CTGCACTCCAGCTCTGGTGACAGACCGAGACTGTTCTTTGATCCAGGATCCAGATGAAGCCCACATGTTGAAATTGGTTGATGCGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS CCA 90 bp CTTTATCCAGAGCCGGCTTGGGCACCTCCATGTCTCTTCCTATTATaGGAGAAAAGCCCGCGTGATCAGAGAAGAAAATGCAGGAACAGA +
Preference number: 5 (lower is better)
Translates to: LYPEPAWAPPCLFLL*EKSPRDQRRKCRNR
Trigger: TCTGTTCCTGCATTTTCTTCTCTGATCACGCGGGCTTTTCTCCCATAATAGGAAGAGACATGGAGGTGCCCAAGCCGGCTCTGGATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS-3UTR CAA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTAGGCACTCGCGCTCCTaGTCACAGATCTCCCGCCTG +
Preference number: 5 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCRHSRS*SQISRL
Trigger: CAGGCGGGAGATCTGTGACAAGGAGCGCGAGTGCCT...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GCTGGATTTGAGCTGGCACAGACGCAAGAGGGAAAAGGGGTCCTGAGTTACATGGAGTTTGAGATCAGCTaGGGCAACATATTAGAGACC +
Preference number: 5 (lower is better)
Translates to: AGFELAQTQEGKGVLSYMEFEIS*GNILET
Trigger: GGTCTCTAATATGTTGCCCAAGCTGATCTCAAACTC...CATGTAACTCAGGACCCCTTTTCCCTCTTGCGTCTGTGCCAGCTCAAATCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp TTGGCGTTGATTTCCTGTTCAAAACGTTTATGCATTTGCTCCAGCTaGAGCTCATGCTTGTTACTCAGCTGGGTCTGGTTCCGATGCTCT +
Preference number: 5 (lower is better)
Translates to: LALISCSKRLCICSS*SSCLLLSWVWFRCS
Trigger: AGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCATAAACGTTTTGAACAGGAAATCAACGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATACAGTTTGAGCTGCTCTaGGAACCTGGTGTAGTCCCG +
Preference number: 5 (lower is better)
Translates to: ETGISPNTFSHARLHMEIQFELL*EPGVVP
Trigger: CGGGACTACACCAGGTTCCAAGAGCAGCTCAAACTG...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp GAAACTGGCATTTCACCTAATACTTTCTCACACGCCAGGCTACACATGGAAATATTGCTGTGCAGGAAGTaGAGGGCTTCTAGCATCTGG +
Preference number: 5 (lower is better)
Translates to: ETGISPNTFSHARLHMEILLCRK*RASSIW
Trigger: CCAGATGCTAGAAGCCCTCAACTTCCTGCACAGCAA...TATTTCCATGTGTAGCCTGGCGTGTGAGAAAGTATTAGGTGAAATGCCAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGTCACTCCTCTGGATCTaGGGCAGCCGCGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLSLLWI*GSRAFS
Trigger: GGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTGA...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp TACCCAGACTCAATATGCCCGCATGATTACTCCAAATCATTACCAGTTTTGTGTTGCTGGGAGAACTGCTaGATCTTCTCACGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YPDSICPHDYSKSLPVLCCWENC*IFSRCS
Trigger: TGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAGCA...ACACAAAACTGGTAATGATTTGGAGTAATCATGCGGGCATATTGAGTCTGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 90 bp TCAAAGAACTTCTTCTTGGCGTTGATTTCCTGTTCAAAACGTTTATaGATTTGCTCCAGCTGCAGCTCATGCTTGTTACTCAGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: SKNFFLALISCSKRL*ICSSCSSCLLLSWV
Trigger: GACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCATAAACGTTTTGAACAGGAAATCAACGCCAAGAAGAAGTTCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTGGACGCGGCAACTCCTaGAAGGGCAAAAGTGATGTG +
Preference number: 5 (lower is better)
Translates to: RILVQTFAFIALYTFCSCGRGNS*KGKSDV
Trigger: CACATCACTTTTGCCCTTCAAGGAGTTGCCGCGTCC...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp CGCATACTGGTTCAAACATTTGCTTTTATTGCGTTATATACATTCTGCAGCTGTAGAGAGCCCATCTCTTaGTTCAGCGACAGGTCAGTG +
Preference number: 5 (lower is better)
Translates to: RILVQTFAFIALYTFCSCREPIS*FSDRSV
Trigger: CACTGACCTGTCGCTGAACAAAGAGATGGGCTCTCT...ACAGCTGCAGAATGTATATAACGCAATAAAAGCAAATGTTTGAACCAGTATGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS-3UTR CAA 90 bp AAAGGTTTCCTTGTAAGTAAACCCGCATACTGGTTCAAACATTTGCTTTTATTGTTGGTTTCAATGACTTaGGCCGCAGCCAAAGCACCC +
Preference number: 5 (lower is better)
Translates to: KGFLVSKPAYWFKHLLLLLVSMT*AAAKAP
Trigger: GGGTGCTTTGGCTGCGGCCAAAGTCATTGAAACCAA...CAATAAAAGCAAATGTTTGAACCAGTATGCGGGTTTACTTACAAGGAAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp CACGCGGCTCCCCGCCACGTCCTGCTGCAGTTCCGATaGCTACCGCGAGATGGCAGCAGCAACCCGGAACAC +
Preference number: 6 (lower is better)
Translates to: HAAPRHVLLQFR*LPRDGSSNPEH
Trigger: GTGTTCCGGGTTGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCCGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS CCA 72 bp CGTCGCCCAGCTCGCCCACGATCTCCCACACCTCGTTaGGGTCCAGGTCGCGGCGGACGTGCTCATATTCGC +
Preference number: 6 (lower is better)
Translates to: RRPARPRSPTPR*GPGRGGRAHIR
Trigger: GCGAATATGAGCACGTCCGCCGCGACCTGGACCCCAACGAGGTGTGGGAGATCGTGGGCGAGCTGGGCGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp TCCGAGCCCCGTGCCACCGGCAGCCTCACCTTCTCATaGTTGCGCAGCAGCTCGTGCCGCTGGAGGAAGTAC +
Preference number: 6 (lower is better)
Translates to: SEPRATGSLTFS*LRSSSCRWRKY
Trigger: GTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGTGGCACGGGGCTCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CAA 72 bp TTCTCGAAGGTAGACAGGCGCAGGATGCGGCGGAAATaGGCAAAAGCCATGGCCGGGGGCGCGGTGGCGCCG +
Preference number: 6 (lower is better)
Translates to: FSKVDRRRMRRK*AKAMAGGAVAP
Trigger: CGGCGCCACCGCGCCCCCGGCCATGGCTTTTGCCAATTTCCGCCGCATCCTGCGCCTGTCTACCTTCGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CAA 72 bp GAGCCCCGTGCCACCGGCAGCCTCACCTTCTCATGCTaGCGCAGCAGCTCGTGCCGCTGGAGGAAGTACTGG +
Preference number: 6 (lower is better)
Translates to: EPRATGSLTFSC*RSSSCRWRKYW
Trigger: CCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGTGGCACGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS GCA 72 bp TGGCCAGCTTCTCCCCACCCAAGGTCTCCAGGGCGCTaGTGTTGGGCCGGCTCTGGCTGGCCTTTTGAGATC +
Preference number: 6 (lower is better)
Translates to: WPASPHPRSPGR*CWAGSGWPFEI
Trigger: GATCTCAAAAGGCCAGCCAGAGCCGGCCCAACAGCAGCGCCCTGGAGACCTTGGGTGGGGAGAAGCTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp AGCCCCGTGCCACCGGCAGCCTCACCTTCTCATGCTTaGGCAGCAGCTCGTGCCGCTGGAGGAAGTACTGGT +
Preference number: 6 (lower is better)
Translates to: SPVPPAASPSHA*AAARAAGGSTG
Trigger: ACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGTGGCACGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS GCA 72 bp AAAAACGCCTCCACGCGGCTCCCCGCCACGTCCTGCTaGAGTTCCGATGCCTACCGCGAGATGGCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: KNASTRLPATSC*SSDAYREMAAA
Trigger: TGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCCGCGTGGAGGCGTTTTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS GCA 72 bp CAGAAAAACGCCTCCACGCGGCTCCCCGCCACGTCCTaGTGCAGTTCCGATGCCTACCGCGAGATGGCAGCA +
Preference number: 6 (lower is better)
Translates to: QKNASTRLPATS*CSSDAYREMAA
Trigger: TGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGGCGGGGAGCCGCGTGGAGGCGTTTTTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS CCA 72 bp CGGATCCGCCTGGCCTCCTCCCGGCGGCGCACGGCATaGTCTTGCTCCATCTTCTCCACTTGCTGCTTTTGC +
Preference number: 6 (lower is better)
Translates to: RIRLASSRRRTA*SCSIFSTCCFC
Trigger: GCAAAAGCAGCAAGTGGAGAAGATGGAGCAAGACCATGCCGTGCGCCGCCGGGAGGAGGCCAGGCGGATCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 72 bp GTGCACCCAAGAGGTGCCCCATCACATACAGCCTCATaGCTCTCCCAGGTCGGCCCGGCAGCAGATCCGAGC +
Preference number: 6 (lower is better)
Translates to: VHPRGAPSHTAS*LSQVGPAADPS
Trigger: GCTCGGATCTGCTGCCGGGCCGACCTGGGAGAGCCATGAGGCTGTATGTGATGGGGCACCTCTTGGGTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CAA 72 bp CCGCCTGGCCTCCTCCCGGCGGCGCACGGCATGGTCTaGCTCCATCTTCTCCACTTGCTGCTTTTGCTGACG +
Preference number: 6 (lower is better)
Translates to: PPGLLPAAHGMV*LHLLHLLLLLT
Trigger: CGTCAGCAAAAGCAGCAAGTGGAGAAGATGGAGCAAGACCATGCCGTGCGCCGCCGGGAGGAGGCCAGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CAA 90 bp CAGGCGGATCCGCCTGGCCTCCTCCCGGCGGCGCACGGCATGGTCTaGCTCCATCTTCTCCACTTGCTGCTTTTGCTGACGCTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: QADPPGLLPAAHGMV*LHLLHLLLLLTLQV
Trigger: AACCTGGAGCGTCAGCAAAAGCAGCAAGTGGAGAAGATGGAGCAAGACCATGCCGTGCGCCGCCGGGAGGAGGCCAGGCGGATCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 72 bp CCCGGCCGTCTTCGATCTCTTCCATCACCTCGGCCTTaGCCTCAGCCACCAGCTCCCGCAGAGCCTTGTTAC +
Preference number: 6 (lower is better)
Translates to: PGRLRSLPSPRP*PQPPAPAEPCY
Trigger: GTAACAAGGCTCTGCGGGAGCTGGTGGCTGAGGCCAAGGCCGAGGTGATGGAAGAGATCGAAGACGGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517524.5
CDS CCA 72 bp GCTTCTCCCCACCCAAGGTCTCCAGGGCGCTGCTGTTaGGCCGGCTCTGGCTGGCCTTTTGAGATCTGTTGG +
Preference number: 6 (lower is better)
Translates to: ASPHPRSPGRCC*AGSGWPFEICW
Trigger: CCAACAGATCTCAAAAGGCCAGCCAGAGCCGGCCCAACAGCAGCGCCCTGGAGACCTTGGGTGGGGAGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 72 bp CGCAGAACTGTAGGGGAAGAACTTGGCGGCCTTGCTTaGGGTGGAGGGGTTTGGGCACTCCGCCTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: RRTVGEELGGLA*GGGVWALRLLA
Trigger: AGCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAGTTCTTCCCCTACAGTTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CAA 72 bp ATGGCCATGCGCGTCTTGCCCTCACTCCTCTGGATCTaGGGCAGCCGCGCCTTTTCCTGTTGCTGCCGCACC +
Preference number: 6 (lower is better)
Translates to: MAMRVLPSLLWI*GSRAFSCCCRT
Trigger: GGTGCGGCAGCAACAGGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CAA 72 bp GCTGCGCTGCCCCCGCCGTTGATGTGGAGGCTCTTCTaGTACATGGCCATGCGCGTCTTGCCCTCACTCCTC +
Preference number: 6 (lower is better)
Translates to: AALPPPLMWRLF*YMAMRVLPSLL
Trigger: GAGGAGTGAGGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CAA 90 bp AGCAGATCCGAGCCCCGTGCCACCGGCAGCCTCACCTTCTCATGCTaGCGCAGCAGCTCGTGCCGCTGGAGGAAGTACTGGTCTTTGAGC +
Preference number: 6 (lower is better)
Translates to: SRSEPRATGSLTFSC*RSSSCRWRKYWSLS
Trigger: GCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAGGCTGCCGGTGGCACGGGGCTCGGATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CAA 90 bp GTGGGAGGGTCCGACTTGGCGATCTTTAGCAGGACCCGCATGGGGTaGAGCTCGTGGTGTGGCGGCTCGATCTGGGCCATCTCAATCAGC +
Preference number: 6 (lower is better)
Translates to: VGGSDLAIFSRTRMG*SSWCGGSIWAISIS
Trigger: GCTGATTGAGATGGCCCAGATCGAGCCGCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGGACCCTCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS CAA 90 bp CGCTGCTCAGCTGCGCTGCCCCCGCCGTTGATGTGGAGGCTCTTCTaGTACATGGCCATGCGCGTCTTGCCCTCACTCCTCTGGATCTTG +
Preference number: 6 (lower is better)
Translates to: RCSAALPPPLMWRLF*YMAMRVLPSLLWIL
Trigger: CAAGATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS TCA 72 bp CCGACTTGGCGATCTTTAGCAGGACCCGCATGGGGTTaGGCTCGTGGTGTGGCGGCTCGATCTGGGCCATCT +
Preference number: 6 (lower is better)
Translates to: PTWRSLAGPAWG*ARGVAARSGPS
Trigger: AGATGGCCCAGATCGAGCCGCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS TCA 72 bp GTCCTGAGACTGGCTGGGTGCCAGCGGGGTGGAAGGTaGCTCCTCGAGAGGCTTGTCAGCATTGAGGCTTGG +
Preference number: 6 (lower is better)
Translates to: VLRLAGCQRGGR*LLERLVSIEAW
Trigger: CCAAGCCTCAATGCTGACAAGCCTCTCGAGGAGTCACCTTCCACCCCGCTGGCACCCAGCCAGTCTCAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 72 bp TCTTCTCACGCTGCTCAGCTGCGCTGCCCCCGCCGTTaGTGTGGAGGCTCTTCTTGTACATGGCCATGCGCG +
Preference number: 6 (lower is better)
Translates to: SSHAAQLRCPRR*CGGSSCTWPCA
Trigger: CGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CCA 72 bp TCACGCTGCTCAGCTGCGCTGCCCCCGCCGTTGATGTaGAGGCTCTTCTTGTACATGGCCATGCGCGTCTTG +
Preference number: 6 (lower is better)
Translates to: SRCSAALPPPLM*RLFLYMAMRVL
Trigger: CAAGACGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CAA 72 bp TCCGACTTGGCGATCTTTAGCAGGACCCGCATGGGGTaGAGCTCGTGGTGTGGCGGCTCGATCTGGGCCATC +
Preference number: 6 (lower is better)
Translates to: SDLAIFSRTRMG*SSWCGGSIWAI
Trigger: GATGGCCCAGATCGAGCCGCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS CAA 72 bp CACTTAGAGGGCGTGAGCAGCGTGGGAGGGTCCGACTaGGCGATCTTTAGCAGGACCCGCATGGGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: HLEGVSSVGGSD*AIFSRTRMGLS
Trigger: GCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGGACCCTCCCACGCTGCTCACGCCCTCTAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS CAA 72 bp GGTGCCAGCGGGGTGGAAGGTGACTCCTCGAGAGGCTaGTCAGCATTGAGGCTTGGCGGACTCACCTCAGAG +
Preference number: 6 (lower is better)
Translates to: GASGVEGDSSRG*SALRLGGLTSE
Trigger: CTCTGAGGTGAGTCCGCCAAGCCTCAATGCTGACAAGCCTCTCGAGGAGTCACCTTCCACCCCGCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CAA 72 bp AGGCACTCGCGCTCCTTGTCACAGATCTCCCGCCTGTaGTCGGTGGTGAGCCTCTTCATGGCCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RHSRSLSQISRL*SVVSLFMASSR
Trigger: CCTGGAGCTGGCCATGAAGAGGCTCACCACCGACAACAGGCGGGAGATCTGTGACAAGGAGCGCGAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000523603.1
ENST00000523615.1
CDS CAA 90 bp GCTCAGCAACTTGCTTCTCCTGGGCTACCTGAATTCTGGCATCCATaGACACGGGTCGGGACTTCCGCAGGGGCACAGGCACTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: AQQLASPGLPEFWHP*TRVGTSAGAQALPG
Trigger: GCCTGGCAGTGCCTGTGCCCCTGCGGAAGTCCCGACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAAGCAAGTTGCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 72 bp CTGCTTCCCGGTCTCGAAGGAGCTCCTGCTTCTTCATaGGGCACTCGCGCTCCTTGTCACAGATCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: LLPGLEGAPASS*GTRAPCHRSPA
Trigger: GGCGGGAGATCTGTGACAAGGAGCGCGAGTGCCTCATGAAGAAGCAGGAGCTCCTTCGAGACCGGGAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000523615.1
CDS GCA 72 bp TGGTGGTTTGGAGGGATCTGTCCCCAGAGGGCTGGCTaGAGGGCTCATTCACACTGTCCTGAGACTGGCTGG +
Preference number: 6 (lower is better)
Translates to: WWFGGICPQRAG*RAHSHCPETGW
Trigger: CCAGCCAGTCTCAGGACAGTGTGAATGAGCCCTGCAGCCAGCCCTCTGGGGACAGATCCCTCCAAACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp CTCCAACTTGGGCGACGGTGCGAGACTCCATCTTCTTaGGCGGCCGAAGCTTGTCCCGCCATTCCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: LQLGRRCETPSS*AAEACPAIPSG
Trigger: ACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGATGGAGTCTCGCACCGTCGCCCAAGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS CCA 72 bp GCGATCTTTAGCAGGACCCGCATGGGGTTGAGCTCGTaGTGTGGCGGCTCGATCTGGGCCATCTCAATCAGC +
Preference number: 6 (lower is better)
Translates to: AIFSRTRMGLSS*CGGSIWAISIS
Trigger: GCTGATTGAGATGGCCCAGATCGAGCCGCCACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS CCA 72 bp CCACGTCCTGCTGCAGTTCCGATGCCTACCGCGAGATaGCAGCAGCAACCCGGAACACAGAGTCCAGTAAGG +
Preference number: 6 (lower is better)
Translates to: PRPAAVPMPTAR*QQQPGTQSPVR
Trigger: CCTTACTGGACTCTGTGTTCCGGGTTGCTGCTGCCATCTCGCGGTAGGCATCGGAACTGCAGCAGGACGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS CAA 72 bp ATCTTCTCACGCTGCTCAGCTGCGCTGCCCCCGCCGTaGATGTGGAGGCTCTTCTTGTACATGGCCATGCGC +
Preference number: 6 (lower is better)
Translates to: IFSRCSAALPPP*MWRLFLYMAMR
Trigger: GCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CAA 72 bp ACTCCAACTTGGGCGACGGTGCGAGACTCCATCTTCTaGCGCGGCCGAAGCTTGTCCCGCCATTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: TPTWATVRDSIF*RGRSLSRHSFR
Trigger: CCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGATGGAGTCTCGCACCGTCGCCCAAGTTGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS CAA 90 bp TCTACAGACCACTTAGAGGGCGTGAGCAGCGTGGGAGGGTCCGACTaGGCGATCTTTAGCAGGACCCGCATGGGGTTGAGCTCGTGGTGT +
Preference number: 6 (lower is better)
Translates to: STDHLEGVSSVGGSD*AIFSRTRMGLSSWC
Trigger: ACACCACGAGCTCAACCCCATGCGGGTCCTGCTAAAGATCGCCAAGTCGGACCCTCCCACGCTGCTCACGCCCTCTAAGTGGTCTGTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000517524.5
ENST00000517527.1
ENST00000522936.5
CDS CAA 90 bp CTTGCCCTCACTCCTCTGGATCTTGGGCAGCCGCGCCTTTTCCTGTaGCTGCCGCACCTTCAGCTGCTCTATCATGCGCTGGTTGTAGCG +
Preference number: 6 (lower is better)
Translates to: LALTPLDLGQPRLFL*LPHLQLLYHALVVA
Trigger: CGCTACAACCAGCGCATGATAGAGCAGCTGAAGGTGCGGCAGCAACAGGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTGAGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CAA 90 bp TTCTTGTACATGGCCATGCGCGTCTTGCCCTCACTCCTCTGGATCTaGGGCAGCCGCGCCTTTTCCTGTTGCTGCCGCACCTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: FLYMAMRVLPSLLWI*GSRAFSCCCRTFSC
Trigger: GCAGCTGAAGGTGCGGCAGCAACAGGAAAAGGCGCGGCTGCCCAAGATCCAGAGGAGTGAGGGCAAGACGCGCATGGCCATGTACAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS CAA 90 bp AACTGCTTGATCTTCTCACGCTGCTCAGCTGCGCTGCCCCCGCCGTaGATGTGGAGGCTCTTCTTGTACATGGCCATGCGCGTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: NCLIFSRCSAALPPP*MWRLFLYMAMRVLP
Trigger: GGGCAAGACGCGCATGGCCATGTACAAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGATCAAGCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS TCA 72 bp TTGCTTCTCCTGGGCTACCTGAATTCTGGCATCCATTaGCACGGGTCGGGACTTCCGCAGGGGCACAGGCAC +
Preference number: 6 (lower is better)
Translates to: LLLLGYLNSGIH*HGSGLPQGHRH
Trigger: GTGCCTGTGCCCCTGCGGAAGTCCCGACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 72 bp GCTCCTTGTCACAGATCTCCCGCCTGTTGTCGGTGGTaGGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: APCHRSPACCRW*ASSWPAPGPPS
Trigger: AGAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCACCACCGACAACAGGCGGGAGATCTGTGACAAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000523603.1
ENST00000523615.1
CDS GCA 72 bp TCCCACACCTCGTTGGGGTCCAGGTCGCGGCGGACGTaGTCATATTCGCGGGACTTTCTCTTCTCGAAGGTA +
Preference number: 6 (lower is better)
Translates to: SHTSLGSRSRRT*SYSRDFLFSKV
Trigger: TACCTTCGAGAAGAGAAAGTCCCGCGAATATGAGCACGTCCGCCGCGACCTGGACCCCAACGAGGTGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp TGGTACCATAGTCCATGCTCTCAGAGGTGCAGAGGCTaGTGCAGTCCGAGTCCCTCTTGGAAGGCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: WYHSPCSQRCRG*CSPSPSWKALE
Trigger: CTCCAGGGCCTTCCAAGAGGGACTCGGACTGCAGCAGCCTCTGCACCTCTGAGAGCATGGACTATGGTACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517775.1
CDS GCA 72 bp CTCTGGATCTTGGGCAGCCGCGCCTTTTCCTGTTGCTaGCGCACCTTCAGCTGCTCTATCATGCGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: LWILGSRAFSCC*RTFSCSIMRWL
Trigger: CAACCAGCGCATGATAGAGCAGCTGAAGGTGCGGCAGCAACAGGAAAAGGCGCGGCTGCCCAAGATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 72 bp CTGGGAGAACTGCTTGATCTTCTCACGCTGCTCAGCTaGGCTGCCCCCGCCGTTGATGTGGAGGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LGELLDLLTLLS*AAPAVDVEALL
Trigger: AAGAAGAGCCTCCACATCAACGGCGGGGGCAGCGCAGCTGAGCAGCGTGAGAAGATCAAGCAGTTCTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 72 bp GTGAGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTCTaGTTGGCTACAAAGTCCCGGTCCTGTGGGGAGAGA +
Preference number: 6 (lower is better)
Translates to: VSLFMASSRSSF*LATKSRSCGER
Trigger: TCTCTCCCCACAGGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS CCA 72 bp GTCCAGCTCCAGCATGATGGCGTCCACGGCTCCCCCTaGACAGAACTCAATCATGATCCACAGCTTCCCGTC +
Preference number: 6 (lower is better)
Translates to: VQLQHDGVHGSP*TELNHDPQLPV
Trigger: GACGGGAAGCTGTGGATCATGATTGAGTTCTGTCCAGGGGGAGCCGTGGACGCCATCATGCTGGAGCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000519710.1
CDS CCA 72 bp CGCTCCTTCTCATGCTTGCGCAGCAGCTCGTGCCGCTaGAGGAAGTACTGGTCTTTGAGCTGCTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: RSFSCLRSSSCR*RKYWSLSCCFT
Trigger: GGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000520476.1
ENST00000523615.1
CDS CCA 72 bp GAAGAACTTGGCGGCCTTGCTTGGGGTGGAGGGGTTTaGGCACTCCGCCTCCTCGCTCAGCTTGAAGAACAT +
Preference number: 6 (lower is better)
Translates to: EELGGLAWGGGV*ALRLLAQLEEH
Trigger: ATGTTCTTCAAGCTGAGCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCAAGCAAGGCCGCCAAGTTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CCA 72 bp CACCTCCAGCAGCTGCGCGGCACTGGGTCGGGTTTCTaGGTTCTTATCCAGGGCTATCTTCAGGAAGTCACG +
Preference number: 6 (lower is better)
Translates to: HLQQLRGTGSGF*VLIQGYLQEVT
Trigger: CGTGACTTCCTGAAGATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGCTGGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517527.1
CDS CCA 72 bp AGGGGAATCCACTCACCTCCAGCAGCTGCGCGGCACTaGGTCGGGTTTCTGGGTTCTTATCCAGGGCTATCT +
Preference number: 6 (lower is better)
Translates to: RGIHSPPAAARH*VGFLGSYPGLS
Trigger: AGATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGCTGGAGGTGAGTGGATTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517527.1
CDS CAA 72 bp CTTGCTTCTCCTGGGCTACCTGAATTCTGGCATCCATaGACACGGGTCGGGACTTCCGCAGGGGCACAGGCA +
Preference number: 6 (lower is better)
Translates to: LASPGLPEFWHP*TRVGTSAGAQA
Trigger: TGCCTGTGCCCCTGCGGAAGTCCCGACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CAA 72 bp GTGGAGGGGTTTGGGCACTCCGCCTCCTCGCTCAGCTaGAAGAACATCTCCTGCTCCCGCTTCTTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: VEGFGHSASSLS*KNISCSRFFWF
Trigger: GAACCAGAAGAAGCGGGAGCAGGAGATGTTCTTCAAGCTGAGCGAGGAGGCGGAGTGCCCAAACCCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CAA 90 bp TTCTTCATGAGGCACTCGCGCTCCTTGTCACAGATCTCCCGCCTGTaGTCGGTGGTGAGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FFMRHSRSLSQISRL*SVVSLFMASSRSSF
Trigger: GAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCACCACCGACAACAGGCGGGAGATCTGTGACAAGGAGCGCGAGTGCCTCATGAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000523603.1
ENST00000523615.1
CDS CAA 90 bp ACTTGGGCGACGGTGCGAGACTCCATCTTCTTGCGCGGCCGAAGCTaGTCCCGCCATTCCTTCAGGTTCTGGTTATGGCTCTCATCCAGG +
Preference number: 6 (lower is better)
Translates to: TWATVRDSIFLRGRS*SRHSFRFWLWLSSR
Trigger: CCTGGATGAGAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGATGGAGTCTCGCACCGTCGCCCAAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS CAA 90 bp TTGCTTGGGGTGGAGGGGTTTGGGCACTCCGCCTCCTCGCTCAGCTaGAAGAACATCTCCTGCTCCCGCTTCTTCTGGTTCAGATCCTCT +
Preference number: 6 (lower is better)
Translates to: LLGVEGFGHSASSLS*KNISCSRFFWFRSS
Trigger: AGAGGATCTGAACCAGAAGAAGCGGGAGCAGGAGATGTTCTTCAAGCTGAGCGAGGAGGCGGAGTGCCCAAACCCCTCCACCCCAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CAA 90 bp TCTTGGACATTCAGGGTCAAGGGCCACCACGAGCCACTGTCGGGGTaGGCAGCACTCCCGAATCATGATCTGCGTGACTTTGCATCCCAC +
Preference number: 6 (lower is better)
Translates to: SWTFRVKGHHEPLSG*AALPNHDLRDFASH
Trigger: GTGGGATGCAAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACCCCGACAGTGGCTCGTGGTGGCCCTTGACCCTGAATGTCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS TCA 72 bp GGGTGGAAGGTGACTCCTCGAGAGGCTTGTCAGCATTaGGGCTTGGCGGACTCACCTCAGAGGAGTTCTGAG +
Preference number: 6 (lower is better)
Translates to: GWKVTPREACQH*GLADSPQRSSE
Trigger: CTCAGAACTCCTCTGAGGTGAGTCCGCCAAGCCTCAATGCTGACAAGCCTCTCGAGGAGTCACCTTCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 72 bp TGTAGTCGTAGGGCGTGTCTTTCATGGTCTCACACATaGCCACCTCGGGGGCCATCCCAGCCTGATGTCTCC +
Preference number: 6 (lower is better)
Translates to: CSRRACLSWSHT*PPRGPSQPDVS
Trigger: GGAGACATCAGGCTGGGATGGCCCCCGAGGTGGTCATGTGTGAGACCATGAAAGACACGCCCTACGACTACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519710.1
CDS GCA 72 bp TTTCCTGTTGCTGCCGCACCTTCAGCTGCTCTATCATaGGCTGGTTGTAGCGCTGCATCTGCTCCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: FPVAAAPSAALS*AGCSAASAPAP
Trigger: AGGAGCGGGAGCAGATGCAGCGCTACAACCAGCGCATGATAGAGCAGCTGAAGGTGCGGCAGCAACAGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 72 bp TGCAGCTGCTGCAGCTCGCTCATGTTGCTCTCACACTaGGCCAGCATGTCCCGCATCTGGTTCTCGTGTTTC +
Preference number: 6 (lower is better)
Translates to: CSCCSSLMLLSH*ASMSRIWFSCF
Trigger: GAAACACGAGAACCAGATGCGGGACATGCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGCAGCAGCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 72 bp GGGGGCACTTGTCATCCAAAGTGTGCACCCAAGAGGTaGCCCATCACATACAGCCTCATGGCTCTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: GGTCHPKCAPKR*PITYSLMALPG
Trigger: ACCTGGGAGAGCCATGAGGCTGTATGTGATGGGGCACCTCTTGGGTGCACACTTTGGATGACAAGTGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS GCA 72 bp AGGAAGACGCTGCTCACAGGTAACAGCTGCTGTGCATaGTTGTCCCGGTGGCCTGTTGGAACTGTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RKTLLTGNSCCA*LSRWPVGTVLP
Trigger: GGGAAGCACAGTTCCAACAGGCCACCGGGACAAGCATGCACAGCAGCTGTTACCTGTGAGCAGCGTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CCA 72 bp ATGCTCCAGCAGCTGCGCGGCACTGGGTCGGGTTTCTaGGTTCTTATCCAGGGCTATCTTCAGGAAGTCACG +
Preference number: 6 (lower is better)
Translates to: MLQQLRGTGSGF*VLIQGYLQEVT
Trigger: CGTGACTTCCTGAAGATAGCCCTGGATAAGAACCCAGAAACCCGACCCAGTGCCGCGCAGCTGCTGGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517524.5
CDS CCA 72 bp GCTCAGCAACTTGCTTCTCCTGGGCTACCTGAATTCTaGCATCCATTGACACGGGTCGGGACTTCCGCAGGG +
Preference number: 6 (lower is better)
Translates to: AQQLASPGLPEF*HPLTRVGTSAG
Trigger: CCCTGCGGAAGTCCCGACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAAGCAAGTTGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 72 bp TTACTCAGCTGGGTCTGGTTCCGATGCTCTTCTTTCTaGAGCAGCCGAAGCTCTCGGAGTTCCTGGCGCCTG +
Preference number: 6 (lower is better)
Translates to: LLSWVWFRCSSF*SSRSSRSSWRL
Trigger: CAGGCGCCAGGAACTCCGAGAGCTTCGGCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 72 bp CGCGGCCGAAGCTTGTCCCGCCATTCCTTCAGGTTCTaGTTATGGCTCTCATCCAGGGCCTTCAGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RGRSLSRHSFRF*LWLSSRAFSFW
Trigger: CCAGAAACTGAAGGCCCTGGATGAGAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS CCA 72 bp CTCACCTTCTCATGCTTGCGCAGCAGCTCGTGCCGCTaGAGGAAGTACTGGTCTTTGAGCTGCTGCTTCACC +
Preference number: 6 (lower is better)
Translates to: LTFSCLRSSSCR*RKYWSLSCCFT
Trigger: GGTGAAGCAGCAGCTCAAAGACCAGTACTTCCTCCAGCGGCACGAGCTGCTGCGCAAGCATGAGAAGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CCA 72 bp AGGAGGCCATGGCTCCCACTGGGAAGGTTTAGAGTTTaGAGCCTGGGGTCTGTCCATCTTCCCACTCCTACC +
Preference number: 6 (lower is better)
Translates to: RRPWLPLGRFRV*SLGSVHLPTPT
Trigger: GGTAGGAGTGGGAAGATGGACAGACCCCAGGCTCCAAACTCTAAACCTTCCCAGTGGGAGCCATGGCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CAA 72 bp TTCAGGGTCAAGGGCCACCACGAGCCACTGTCGGGGTaGGCAGCACTCCCGAATCATGATCTGCGTGACTTT +
Preference number: 6 (lower is better)
Translates to: FRVKGHHEPLSG*AALPNHDLRDF
Trigger: AAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACCCCGACAGTGGCTCGTGGTGGCCCTTGACCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS CAA 72 bp ACGGTGCGAGACTCCATCTTCTTGCGCGGCCGAAGCTaGTCCCGCCATTCCTTCAGGTTCTGGTTATGGCTC +
Preference number: 6 (lower is better)
Translates to: TVRDSIFLRGRS*SRHSFRFWLWL
Trigger: GAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGATGGAGTCTCGCACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520476.1
CDS TCA 72 bp CCACCCTGCTCAGCAACTTGCTTCTCCTGGGCTACCTaGATTCTGGCATCCATTGACACGGGTCGGGACTTC +
Preference number: 6 (lower is better)
Translates to: PPCSATCFSWAT*ILASIDTGRDF
Trigger: GAAGTCCCGACCCGTGTCAATGGATGCCAGAATTCAGGTAGCCCAGGAGAAGCAAGTTGCTGAGCAGGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS TCA 72 bp ACAGGTGAGAAATCAGAAGACGCAGGCCCTGAAGACTaGGACACACCTCACGCTGTGGCTACGAGGGCACCA +
Preference number: 6 (lower is better)
Translates to: TGEKSEDAGPED*DTPHAVATRAP
Trigger: TGGTGCCCTCGTAGCCACAGCGTGAGGTGTGTCTCAGTCTTCAGGGCCTGCGTCTTCTGATTTCTCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517360.1
CDS GCA 72 bp CCTGGCTCCTCTTGGGGGCACTTGTCATCCAAAGTGTaGACCCAAGAGGTGCCCCATCACATACAGCCTCAT +
Preference number: 6 (lower is better)
Translates to: PGSSWGHLSSKV*TQEVPHHIQPH
Trigger: ATGAGGCTGTATGTGATGGGGCACCTCTTGGGTGCACACTTTGGATGACAAGTGCCCCCAAGAGGAGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CCA 72 bp CTCCCAGGAGCTTCACAATGTAGGGGTGGTCGCAGGTaGCCAGGATCTCAATCTCCACGATGTAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: LPGASQCRGGRR*PGSQSPRCSPP
Trigger: TGGAGGACTACATCGTGGAGATTGAGATCCTGGCCACCTGCGACCACCCCTACATTGTGAAGCTCCTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000519710.1
CDS CCA 72 bp AGGAAGTACTGGTCTTTGAGCTGCTGCTTCACCAGCTaGTGCCTCTCCTGCAGCTGGTGCTCTTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: RKYWSLSCCFTS*CLSCSWCSSIS
Trigger: GGAGATGGAAGAGCACCAGCTGCAGGAGAGGCACCAGCTGGTGAAGCAGCAGCTCAAAGACCAGTACTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000176763.10
ENST00000519269.1
ENST00000520476.1
ENST00000523615.1
CDS CAA 72 bp GCCAGCCTGATGTCTCCCTCGAGGGTCATCAGCACGTaGCCAGCTTTCAGATCTCGGTGGATGATCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ASLMSPSRVIST*PAFRSRWMILL
Trigger: CAAGAGGATCATCCACCGAGATCTGAAAGCTGGCAACGTGCTGATGACCCTCGAGGGAGACATCAGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CAA 72 bp AGATCCTCTTCCAGAGCCTTCTTGCGCGGCCGAAGCTaGTCCCGCCATTCCTTCAGGTTCTGGTTATGGCTC +
Preference number: 6 (lower is better)
Translates to: RSSSRAFLRGRS*SRHSFRFWLWL
Trigger: GAGCCATAACCAGAACCTGAAGGAATGGCGGGACAAGCTTCGGCCGCGCAAGAAGGCTCTGGAAGAGGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517360.1
CDS CAA 72 bp AAGACGCTGCTCACAGGTAACAGCTGCTGTGCATGCTaGTCCCGGTGGCCTGTTGGAACTGTGCTTCCCTTC +
Preference number: 6 (lower is better)
Translates to: KTLLTGNSCCAC*SRWPVGTVLPF
Trigger: GAAGGGAAGCACAGTTCCAACAGGCCACCGGGACAAGCATGCACAGCAGCTGTTACCTGTGAGCAGCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CAA 72 bp CCCAGCCTGATGTCTCCCTCGAGGGTCATCAGCACGTaGCCAGCTTTCAGATCTCGGTGGATGATCCTCTTG +
Preference number: 6 (lower is better)
Translates to: PSLMSPSRVIST*PAFRSRWMILL
Trigger: CAAGAGGATCATCCACCGAGATCTGAAAGCTGGCAACGTGCTGATGACCCTCGAGGGAGACATCAGGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519710.1
CDS GCA 72 bp GTGAGCCTCTTCATGGCCAGCTCCAGGTCCTCCTTCTaGTTGGCTACAAAGTCCCGGTCAAGAAGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: VSLFMASSRSSF*LATKSRSRSCF
Trigger: AAAGCAGCTTCTTGACCGGGACTTTGTAGCCAAGCAGAAGGAGGACCTGGAGCTGGCCATGAAGAGGCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp ACTTTTCATTCTGCAGCTGCTGCAGCTCGCTCATGTTaGTCTCACACTGCGCCAGCATGTCCCGCATCTGGT +
Preference number: 6 (lower is better)
Translates to: TFHSAAAAARSC*SHTAPACPASG
Trigger: ACCAGATGCGGGACATGCTGGCGCAGTGTGAGAGCAACATGAGCGAGCTGCAGCAGCTGCAGAATGAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000520476.1
CDS GCA 72 bp CACTCCGCCTCCTCGCTCAGCTTGAAGAACATCTCCTaGTCCCGCTTCTTCTGGTTCAGATCCTCTTCCAGA +
Preference number: 6 (lower is better)
Translates to: HSASSLSLKNIS*SRFFWFRSSSR
Trigger: TCTGGAAGAGGATCTGAACCAGAAGAAGCGGGAGCAGGAGATGTTCTTCAAGCTGAGCGAGGAGGCGGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000176763.10
ENST00000517360.1
ENST00000520476.1
CDS GCA 72 bp CACTGTCGGGGTTGGCAGCACTCCCGAATCATGATCTaGGTGACTTTGCATCCCACTGTCTTCCTTAGGACG +
Preference number: 6 (lower is better)
Translates to: HCRGWQHSRIMI*VTLHPTVFLRT
Trigger: CGTCCTAAGGAAGACAGTGGGATGCAAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACCCCGACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS CCA 72 bp TCCAGCTGCAGCTCATGCTTGTTACTCAGCTGGGTCTaGTTCCGATGCTCTTCTTTCTGGAGCAGCCGAAGC +
Preference number: 6 (lower is better)
Translates to: SSCSSCLLLSWV*FRCSSFWSSRS
Trigger: GCTTCGGCTGCTCCAGAAAGAAGAGCATCGGAACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CAA 72 bp GGTTGGCAGCACTCCCGAATCATGATCTGCGTGACTTaGCATCCCACTGTCTTCCTTAGGACGCTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: GWQHSRIMICVT*HPTVFLRTLFH
Trigger: GTGGAAGAGCGTCCTAAGGAAGACAGTGGGATGCAAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS CAA 90 bp CACTGTCGGGGTTGGCAGCACTCCCGAATCATGATCTGCGTGACTTaGCATCCCACTGTCTTCCTTAGGACGCTCTTCCACAGAAAAACG +
Preference number: 6 (lower is better)
Translates to: HCRGWQHSRIMICVT*HPTVFLRTLFHRKT
Trigger: CGTTTTTCTGTGGAAGAGCGTCCTAAGGAAGACAGTGGGATGCAAAGTCACGCAGATCATGATTCGGGAGTGCTGCCAACCCCGACAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
ENST00000521322.1
CDS GCA 72 bp AAAGGATGTGTACATCTTCAAAGCTCTCCATGCAACTaGCTCCTCCAGGCCAATCTGCTGTCCCTCTGCGTG +
Preference number: 6 (lower is better)
Translates to: KGCVHLQSSPCN*LLQANLLSLCV
Trigger: CACGCAGAGGGACAGCAGATTGGCCTGGAGGAGGCAGTTGCATGGAGAGCTTTGAAGATGTACACATCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523603.1
CDS CCA 72 bp CATACACAGCAAGTAACAGTCAGTGAGGGAGCCACTTaGGCCATTGGCTTCCCTGCATCGTTTCCCCTATTC +
Preference number: 6 (lower is better)
Translates to: HTQQVTVSEGAT*AIGFPASFPLF
Trigger: GAATAGGGGAAACGATGCAGGGAAGCCAATGGCCCAAGTGGCTCCCTCACTGACTGTTACTTGCTGTGTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS CCA 72 bp ACGCAGGCCCTGAAGACTGAGACACACCTCACGCTGTaGCTACGAGGGCACCAGCATCGTTCATTTATTATT +
Preference number: 6 (lower is better)
Translates to: TQALKTETHLTL*LRGHQHRSFII
Trigger: AATAATAAATGAACGATGCTGGTGCCCTCGTAGCCACAGCGTGAGGTGTGTCTCAGTCTTCAGGGCCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517360.1
CDS CCA 72 bp GAGCCGGCTTGGGCACCTCCATGTCTCTTCCTATTATaGGAGAAAAGCCCGCGTGATCAGAGAAGAAAATGC +
Preference number: 6 (lower is better)
Translates to: EPAWAPPCLFLL*EKSPRDQRRKC
Trigger: GCATTTTCTTCTCTGATCACGCGGGCTTTTCTCCCATAATAGGAAGAGACATGGAGGTGCCCAAGCCGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS CAA 90 bp CCCTGCCTAAAGCTGATTGGCCGTTGCGGCTCCTGTCACTCCCCTTaGCTTAGCAAATATGTTCGAGTCTCTACTGCGTGTTTTTCACCA +
Preference number: 6 (lower is better)
Translates to: PCLKLIGRCGSCHSP*LSKYVRVSTACFSP
Trigger: TGGTGAAAAACACGCAGTAGAGACTCGAACATATTTGCTAAGCAAAGGGGAGTGACAGGAGCCGCAACGGCCAATCAGCTTTAGGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CCA 72 bp ACAGAGAGCCCATCTCTTTGTTCAGCGACAGGTCAGTaGAGAGATTGGTACCATAGTCCATGCTCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: TESPSLCSATGQ*RDWYHSPCSQR
Trigger: CCTCTGAGAGCATGGACTATGGTACCAATCTCTCCACTGACCTGTCGCTGAACAAAGAGATGGGCTCTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000176763.10
ENST00000517775.1
CDS CAA 72 bp AAGCTGATTGGCCGTTGCGGCTCCTGTCACTCCCCTTaGCTTAGCAAATATGTTCGAGTCTCTACTGCGTGT +
Preference number: 6 (lower is better)
Translates to: KLIGRCGSCHSP*LSKYVRVSTAC
Trigger: ACACGCAGTAGAGACTCGAACATATTTGCTAAGCAAAGGGGAGTGACAGGAGCCGCAACGGCCAATCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CAA 90 bp AAGGTAGGAGGTGCTAAGGGTTTGGGAGGTGGTCAATGTAAAGTGTaGGGGTATCCAGAGATGGAAGAGCTTACTTCCAGATGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: KVGGAKGLGGGQCKV*GYPEMEELTSRWRQ
Trigger: CTGCCTCCATCTGGAAGTAAGCTCTTCCATCTCTGGATACCCCAACACTTTACATTGACCACCTCCCAAACCCTTAGCACCTCCTACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522879.1
CDS TCA 72 bp GAAAAGAAAGAGACATACACAGCAAGTAACAGTCAGTaGGGGAGCCACTTGGGCCATTGGCTTCCCTGCATC +
Preference number: 6 (lower is better)
Translates to: EKKETYTASNSQ*GSHLGHWLPCI
Trigger: GATGCAGGGAAGCCAATGGCCCAAGTGGCTCCCTCACTGACTGTTACTTGCTGTGTATGTCTCTTTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519269.1
CDS TCA 72 bp GCAACCCGGAACACAGAGTCCAGTAAGGCGTGCCGATaGAGGAATCTCGTTTCTGTAGAGTCTTCAGATTCT +
Preference number: 6 (lower is better)
Translates to: ATRNTESSKACR*RNLVSVESSDS
Trigger: AGAATCTGAAGACTCTACAGAAACGAGATTCCTTCATCGGCACGCCTTACTGGACTCTGTGTTCCGGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517381.1
ENST00000518267.5
ENST00000519441.5
CDS TCA 72 bp TCCTGCTGCAGTTCCGATGCCAGTAAGGCGTGCCGATaGAGGAATCTCGTTTCTGTAGAGTCTTCAGATTCT +
Preference number: 6 (lower is better)
Translates to: SCCSSDASKACR*RNLVSVESSDS
Trigger: AGAATCTGAAGACTCTACAGAAACGAGATTCCTTCATCGGCACGCCTTACTGGCATCGGAACTGCAGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521322.1
CDS CCA 72 bp CTGAACCAACCAAGGGACAACATAGGGCTAAGAATCTaGCCTTTACAGGTGCTTCTTGGACATTCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: LNQPRDNIGLRI*PLQVLLGHSGS
Trigger: TGACCCTGAATGTCCAAGAAGCACCTGTAAAGGCCAGATTCTTAGCCCTATGTTGTCCCTTGGTTGGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518267.5
ENST00000521322.1
CDS CAA 72 bp CATCTGCTTATCTTGATGGACAGAGAGCCCATCTCTTaGTTCAGCGACAGGTCAGTGGAGAGATTGGTACCA +
Preference number: 6 (lower is better)
Translates to: HLLILMDREPIS*FSDRSVERLVP
Trigger: TGGTACCAATCTCTCCACTGACCTGTCGCTGAACAAAGAGATGGGCTCTCTGTCCATCAAGATAAGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517775.1
CDS CAA 72 bp GGTGCTAAGGGTTTGGGAGGTGGTCAATGTAAAGTGTaGGGGTATCCAGAGATGGAAGAGCTTACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: GAKGLGGGQCKV*GYPEMEELTSR
Trigger: TCTGGAAGTAAGCTCTTCCATCTCTGGATACCCCAACACTTTACATTGACCACCTCCCAAACCCTTAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522879.1
CDS CCA 72 bp AGACGCATCAACCAATTTCAACATGTGGGCTTCATCTaGATCCTGGATCAAAGAACAGTCTCGGTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: RRINQFQHVGFI*ILDQRTVSVCH
Trigger: GTGACAGACCGAGACTGTTCTTTGATCCAGGATCCAGATGAAGCCCACATGTTGAAATTGGTTGATGCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000523603.1
ENST00000523615.1
CDS CCA 72 bp GTGCTAAGGGTTTGGGAGGTGGTCAATGTAAAGTGTTaGGGTATCCAGAGATGGAAGAGCTTACTTCCAGAT +
Preference number: 6 (lower is better)
Translates to: VLRVWEVVNVKC*GIQRWKSLLPD
Trigger: ATCTGGAAGTAAGCTCTTCCATCTCTGGATACCCCAACACTTTACATTGACCACCTCCCAAACCCTTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522879.1
CDS CAA 90 bp GAACTTCTTCTTGGCGTTGATTTCCTGTTCAAAACGTTTATGCATTaGCTCCAGCTGCAGCTCATGCTTGTTACTCAGCTGGGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: ELLLGVDFLFKTFMH*LQLQLMLVTQLGLV
Trigger: AACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCATAAACGTTTTGAACAGGAAATCAACGCCAAGAAGAAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS GCA 72 bp ATTTCCTGTTCAAAACGTTTATGCATTTGCTCCAGCTaGAGCTCATGCTTGTTACTCAGCTGGGTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ISCSKRLCICSS*SSCLLLSWVWF
Trigger: GAACCAGACCCAGCTGAGTAACAAGCATGAGCTGCAGCTGGAGCAAATGCATAAACGTTTTGAACAGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000176763.10
CDS CCA 72 bp ATGAACACTTTCCTCTCTACTAACGAGAGCCTGCACTaGCAGCAGCCTTCAGGAAAGCAATTTGGCAATAAA +
Preference number: 6 (lower is better)
Translates to: MNTFLSTNESLH*QQPSGKQFGNK
Trigger: TTTATTGCCAAATTGCTTTCCTGAAGGCTGCTGCCAGTGCAGGCTCTCGTTAGTAGAGAGGAAAGTGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517524.5