Pregenerated sensors for STIP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000168439Ensembl transcript IDs: ENST00000355603.3, ENST00000358794.9, ENST00000540501.1, ENST00000540736.1, ENST00000540887.1, ENST00000544739.5
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGAGGGGTCCTGGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTaGTCCACTTCGCAGAACTTGCCAGTCCTACTCTTGAGCCCACGA | + |
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Preference number: 1 (lower is better) Translates to: REGSWRGPGRRAAEA*STSQNLPVLLLSPR Trigger: TCGTGGGCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCCAGGACCCCTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR CAA 90 bp | GGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTCGCAGAACTaGCCAGTCCTACTCTTGAGCCCACGACACAGCTTCCAGTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: GPGRRAAEACSTSQN*PVLLLSPRHSFQSR Trigger: TCTTGACTGGAAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGGTCCTGGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTATGGGCCTTTCCAAATaGCTGCTTAAGCTATCACGA | + |
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Preference number: 2 (lower is better) Translates to: GRGPGEARGAELQRPAPLMGLSK*LLKLSR Trigger: TCGTGATAGCTTAAGCAGTCATTTGGAAAGGCCCAT...AAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCCAGGACCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR CAA 90 bp | AGGAAGACGCAGTTACTTGAAATGAGACAACCTTTAAAGTCTTACTaGCTCTCAGAGCAAGCCCCAATTCAACCCCCTCTACAGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RKTQLLEMRQPLKSY*LSEQAPIQPPLQKA Trigger: GGCCTTCTGTAGAGGGGGTTGAATTGGGGCTTGCTCTGAGAGCAAGTAAGACTTTAAAGGTTGTCTCATTTCAAGTAACTGCGTCTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR GCA 72 bp | CAGGGAGGGGTCCTGGCGAGGCCCGGGGCGCCGAGCTaGAGAGGCCTGCTCCACTTCGCAGAACTTGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: QGGVLARPGAPS*RGLLHFAELAS Trigger: ACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCCAGGACCCCTCCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR GCA 72 bp | TCCTGGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTaGTCCACTTCGCAGAACTTGCCAGTCCTACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: SWRGPGRRAAEA*STSQNLPVLLL Trigger: CAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR TCA 72 bp | CCTGCTCCACTTCGCAGAACTTGCCAGTCCTACTCTTaGGCCCACGACACAGCTTCCAGTCAAGACCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PAPLRRTCQSYS*AHDTASSQDLS Trigger: AGAAAGGTCTTGACTGGAAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR TCA 90 bp | AGGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTCGCAGAACTTGCCAGTTGCCAGTCCTACTCTTaGGCCCACGACACAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RPGAPSCRGLLHFAELASCQSYS*AHDTAS Trigger: GGAAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCA...ACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR GCA 90 bp | AGGGGTCCTGGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTCGCGTGCACTCATCTGCCTaGTTTTGTTCTCCATTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RGPGEARGAELQRPAPLRVHSSA*FCSPFP Trigger: TGGAAATGGAGAACAAAAGCAGGCAGATGAGTGCAC...GCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCCAGGACCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR GCA 90 bp | GGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTCGCAGAACTTGCCCGCGTGCACTCATCTaGCTGCTTTTGTTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: GEARGAELQRPAPLRRTCPRALI*LLLFSI Trigger: AATGGAGAACAAAAGCAGGCAGATGAGTGCACGCGG...GCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR GCA 90 bp | CTGCTCCACTTCGCAGAACTTGCCAGTCCTACTCTTGAGCCCACGACACAGCTTCCCGGGGCGCCGAGCTaGAGAGGCCTGCTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LLHFAELASPTLEPTTQLPGAPS*RGLLHF Trigger: GAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGG...AAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR TCA 90 bp | GGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTCGCAGAACTTGCATGGGCCTTTCCAAATaGCTGCTTAAGCTATCACGA | + |
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Preference number: 4 (lower is better) Translates to: GEARGAELQRPAPLRRTCMGLSK*LLKLSR Trigger: TCGTGATAGCTTAAGCAGTCATTTGGAAAGGCCCAT...GCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR CAA 72 bp | CGCCGAGCTGCAGAGGCCTGCTCCACTTCGCAGAACTaGCCAGTCCTACTCTTGAGCCCACGACACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RRAAEACSTSQN*PVLLLSPRHSF Trigger: GAAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR TCA 90 bp | CTGCTCCACTTCGCAGAACTTGCCAGTCCTACTCTTGAGCCCACGACACAGCTTGCAAGGCCGCCTCTCTaGCTCTACGTACTCGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLHFAELASPTLEPTTQLARPPL*LYVLAE Trigger: CTCAGCGAGTACGTAGAGTCAGAGAGGCGGCCTTGC...AAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR CCA 90 bp | CCTTCCAGCTCGCCACCCACTGCCAATCTCCTTAAGTTTAGGAAGAATGACAGAAAGGTCGGCTCCAGCTaGATACATTCCTCACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSSPPTANLLKFRKNDRKVGSS*IHSSQS Trigger: GGACTGTGAGGAATGTATCCAGCTGGAGCCGACCTT...TCTGTCATTCTTCCTAAACTTAAGGAGATTGGCAGTGGGTGGCGAGCTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR GCA 90 bp | GCTATTACAGGATTCTTTAAGTGTCTACAGAGGAAGACGCAGTTACTTGAAATGGCGCTGGTAGCCGTCTaGCGCCTCCTTACAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AITGFFKCLQRKTQLLEMALVAV*RLLTAG Trigger: TCCAGCTGTAAGGAGGCGGCAGACGGCTACCAGCGC...CATTTCAAGTAACTGCGTCTTCCTCTGTAGACACTTAAAGAATCCTGTAATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR GCA 90 bp | AATGAGACAACCTTTAAAGTCTTACTTGCTCTCAGAGCAAGCCCCAATTCAACCCGAGCTGCAGAGGCCTaGTCCACTTCGCAGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: NETTFKVLLALRASPNSTRAAEA*STSQNL Trigger: CAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCG...GGTTGAATTGGGGCTTGCTCTGAGAGCAAGTAAGACTTTAAAGGTTGTCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR TCA 90 bp | TTTAAGTGTCTACAGAGGAAGACGCAGTTACTTGAAATGAGACAACCTTTAAAGACTCTACGTACTCGCTaGGTGCCTGGGGGTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FKCLQRKTQLLEMRQPLKTLRTR*VPGGPS Trigger: AGAAGGACCCCCAGGCACTCAGCGAGTACGTAGAGT...CTTTAAAGGTTGTCTCATTTCAAGTAACTGCGTCTTCCTCTGTAGACACTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS-3UTR TCA 90 bp | CAAAGCCCTTCCAGCTCGCCACCCACTGCCAATCTCCTTAAGTTTAGGAAGAATGAAGACGCAGTTACTTaGAATGAGACAACCTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: QSPSSSPPTANLLKFRKNEDAVT*NETTFK Trigger: TTTAAAGGTTGTCTCATTTCAAGTAACTGCGTCTTC...ATTCTTCCTAAACTTAAGGAGATTGGCAGTGGGTGGCGAGCTGGAAGGGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| 3UTR CAA 72 bp | CAGTTACTTGAAATGAGACAACCTTTAAAGTCTTACTaGCTCTCAGAGCAAGCCCCAATTCAACCCCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: QLLEMRQPLKSY*LSEQAPIQPPL Trigger: TAGAGGGGGTTGAATTGGGGCTTGCTCTGAGAGCAAGTAAGACTTTAAAGGTTGTCTCATTTCAAGTAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS CCA 90 bp | AAGCTGTGGCCTCCGCCGGGCCCTCCTCGCCCAACCAGGGGGCGATaGGCGCTCCCCGCGGCCGGCCTCGCTAAAGATCCCGCTCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: KLWPPPGPPRPTRGR*ALPAAGLAKDPAPA Trigger: GGCGGGAGCGGGATCTTTAGCGAGGCCGGCCGCGGGGAGCGCCCATCGCCCCCTGGTTGGGCGAGGAGGGCCCGGCGGAGGCCACAGCTT 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540501.1 |
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| CDS GCA 90 bp | GCCCTTCGCCCGCGCATCGGGATGGGGGTCCTAGCCGGTGGGAGCTaGCTGTCCCTCGAGCGCCAGCTACCCGCGTTGTCCAGCGCTCCG | + |
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Preference number: 5 (lower is better) Translates to: ALRPRIGMGVLAGGS*LSLERQLPALSSAP Trigger: CGGAGCGCTGGACAACGCGGGTAGCTGGCGCTCGAGGGACAGGCAGCTCCCACCGGCTAGGACCCCCATCCCGATGCGCGGGCGAAGGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 90 bp | GGCCCCAGCCCTTCGCCCGCGCATCGGGATGGGGGTCCTAGCCGGTaGGAGCTGCCTGTCCCTCGAGCGCCAGCTACCCGCGTTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GPSPSPAHRDGGPSR*ELPVPRAPATRVVQ Trigger: CTGGACAACGCGGGTAGCTGGCGCTCGAGGGACAGGCAGCTCCCACCGGCTAGGACCCCCATCCCGATGCGCGGGCGAAGGGCTGGGGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 90 bp | TGGACAGGCCGGGGATCTCACCGCGGCGGGCCCGGCTGTCCCGCTTaGGCGTCCTCAGTGGAACCGCACACCCTTTCTCAGCGCGCCGGT | + |
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Preference number: 5 (lower is better) Translates to: WTGRGSHRGGPGCPA*ASSVEPHTLSQRAG Trigger: ACCGGCGCGCTGAGAAAGGGTGTGCGGTTCCACTGAGGACGCCCAAGCGGGACAGCCGGGCCCGCCGCGGTGAGATCCCCGGCCTGTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 90 bp | TCGGGGTCTGTAGCTGTGTCGCCGGCGGCTGCGGGGCCTCTGGGTTaGTTTCCCTCTCGCTCCCGAGTGCCGCGAGTTCCAGGCGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SGSVAVSPAAAGPLG*FPSRSRVPRVPGGP Trigger: GGGACCGCCTGGAACTCGCGGCACTCGGGAGCGAGAGGGAAAGCAACCCAGAGGCCCCGCAGCCGCCGGCGACACAGCTACAGACCCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 90 bp | GGAGTACCGGCTGCAGTCGGGGTCTGTAGCTGTGTCGCCGGCGGCTaGGGGGCCTCTGGGTTGCTTTCCCTCTCGCTCCCGAGTGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: GVPAAVGVCSCVAGG*GASGLLSLSLPSAA Trigger: CGCGGCACTCGGGAGCGAGAGGGAAAGCAACCCAGAGGCCCCGCAGCCGCCGGCGACACAGCTACAGACCCCGACTGCAGCCGGTACTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 90 bp | CTGAATGTTCCGGAAATGCCACGTGACCGCGAGGGCGCTTGGGCTTaGGCTGGACAGGCCGGGGATCTCACCGCGGCGGGCCCGGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LNVPEMPRDREGAWA*AGQAGDLTAAGPAV Trigger: GACAGCCGGGCCCGCCGCGGTGAGATCCCCGGCCTGTCCAGCCCAAGCCCAAGCGCCCTCGCGGTCACGTGGCATTTCCGGAACATTCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 90 bp | GATCTCACCGCGGCGGGCCCGGCTGTCCCGCTTGGGCGTCCTCAGTaGAACCGCACACCCTTTCTCAGCGCGCCGGTCGTTTGGTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: DLTAAGPAVPLGRPQ*NRTPFLSAPVVWSC Trigger: ACAGGACCAAACGACCGGCGCGCTGAGAAAGGGTGTGCGGTTCCACTGAGGACGCCCAAGCGGGACAGCCGGGCCCGCCGCGGTGAGATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 90 bp | GCTCCGGCCTCGGCCCGGCCCTCCTGCCTCCTGGCTGTTAGGTTCTaGATGTTCCGGAAATGCCACGTGACCGCGAGGGCGCTTGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: APASARPSCLLAVRF*MFRKCHVTARALGL Trigger: AAGCCCAAGCGCCCTCGCGGTCACGTGGCATTTCCGGAACATTCAGAACCTAACAGCCAGGAGGCAGGAGGGCCGGGCCGAGGCCGGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS-3UTR CAA 90 bp | AGGGGTCCTGGCGAGGCCCGGGGCGCCGAGCTGCAGAGGCCTGCTCCACTTCGCCCTTTAAAGTCTTACTaGCTCTCAGAGCAAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RGPGEARGAELQRPAPLRPLKSY*LSEQAP Trigger: TGGGGCTTGCTCTGAGAGCAAGTAAGACTTTAAAGG...GCGAAGTGGAGCAGGCCTCTGCAGCTCGGCGCCCCGGGCCTCGCCAGGACCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS TCA 90 bp | CCTGCCTCCTGGCTGTTAGGTTCTGAATGTTCCGGAAATGCCACGTaGCCGCGAGGGCGCTTGGGCTTGGGCTGGACAGGCCGGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: PASWLLGSECSGNAT*PRGRLGLGWTGRGS Trigger: AGATCCCCGGCCTGTCCAGCCCAAGCCCAAGCGCCCTCGCGGTCACGTGGCATTTCCGGAACATTCAGAACCTAACAGCCAGGAGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 90 bp | CAGGCTCCACGAATGGAGGGAGGAGCGAACTTCTGCGACACGGATTaGTCTTTTGCACTGCCAATCGTAGCCGCGCTGGCCGCGCCCATT | + |
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Preference number: 5 (lower is better) Translates to: QAPRMEGGANFCDTD*SFALPIVAALAAPI Trigger: AATGGGCGCGGCCAGCGCGGCTACGATTGGCAGTGCAAAAGACCAATCCGTGTCGCAGAAGTTCGCTCCTCCCTCCATTCGTGGAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 90 bp | TCTCCCATTGGGCTGCCGGACTCCATGTCGGAACCGCCTTCAGAATaGGAGCGATTCCAATTGGGCGGAGGGTTGCCAACTCTTTGCGCT | + |
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Preference number: 5 (lower is better) Translates to: SPIGLPDSMSEPPSE*ERFQLGGGLPTLCA Trigger: AGCGCAAAGAGTTGGCAACCCTCCGCCCAATTGGAATCGCTCTCATTCTGAAGGCGGTTCCGACATGGAGTCCGGCAGCCCAATGGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 90 bp | TTTTGCACTGCCAATCGTAGCCGCGCTGGCCGCGCCCATTGGTTCTaGTCGTTCTGGAAATTTCCACCTCTCCCATTGGGCTGCCGGACT | + |
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Preference number: 5 (lower is better) Translates to: FCTANRSRAGRAHWF*SFWKFPPLPLGCRT Trigger: AGTCCGGCAGCCCAATGGGAGAGGTGGAAATTTCCAGAACGATCAGAACCAATGGGCGCGGCCAGCGCGGCTACGATTGGCAGTGCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 90 bp | GAGCGATTCCAATTGGGCGGAGGGTTGCCAACTCTTTGCGCTGATTaGTTTAAATCGCTGCCCTTCAAAAGGCCGGGTTTCGCCCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: ERFQLGGGLPTLCAD*FKSLPFKRPGFAPP Trigger: GGGCGGGGCGAAACCCGGCCTTTTGAAGGGCAGCGATTTAAACCAATCAGCGCAAAGAGTTGGCAACCCTCCGCCCAATTGGAATCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS-3UTR CAA 90 bp | CCGAGCTGCAGAGGCCTGCTCCACTTCGCAGAACTTGCCAGTCCTACTCTTGAGTTGCCAGTCCTACTCTaGAGCCCACGACACAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: PSCRGLLHFAELASPTLELPVLL*SPRHSF Trigger: GAAGCTGTGTCGTGGGCTCAAGAGTAGGACTGGCAA...CTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGAGCAGGCCTCTGCAGCTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS CCA 90 bp | GCGCCCATTGGTTCTGATCGTTCTGGAAATTTCCACCTCTCCCATTaGGCTGCCGGACTCCATGTCGGAACCGCCTTCAGAATGAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: APIGSDRSGNFHLSH*AAGLHVGTAFRMRA Trigger: CGCTCTCATTCTGAAGGCGGTTCCGACATGGAGTCCGGCAGCCCAATGGGAGAGGTGGAAATTTCCAGAACGATCAGAACCAATGGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 90 bp | GAAGCAACCGGTGAGGACAGCAGAGTTTTGGACCAGGCTTTATTCTaGGGCTGCAGCAGATCTGGTGTCAGTCTTGTGGTTGCCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: EATGEDSRVLDQALF*GCSRSGVSLVVASG Trigger: CCCTGAGGCAACCACAAGACTGACACCAGATCTGCTGCAGCCTCAGAATAAAGCCTGGTCCAAAACTCTGCTGTCCTCACCGGTTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544739.5 |
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| CDS CCA 90 bp | AGGCTCATTCCCTTGGACAAGCTCAGTACAGGCAACTCAAGCATGTaGACTTCCAACTCTAATGCCTCACCCAGCACCAAACAGAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: RLIPLDKLSTGNSSM*TSNSNASPSTKQRG Trigger: TCCCCTCTGTTTGGTGCTGGGTGAGGCATTAGAGTTGGAAGTCCACATGCTTGAGTTGCCTGTACTGAGCTTGTCCAAGGGAATGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS CCA 90 bp | GGAAATCCCTTCGACTTGAAGCAACCGGTGAGGACAGCAGAGTTTTaGACCAGGCTTTATTCTGAGGCTGCAGCAGATCTGGTGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GNPFDLKQPVRTAEF*TRLYSEAAADLVSV Trigger: GACTGACACCAGATCTGCTGCAGCCTCAGAATAAAGCCTGGTCCAAAACTCTGCTGTCCTCACCGGTTGCTTCAAGTCGAAGGGATTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000544739.5 |
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| CDS TCA 90 bp | CCCACACAAGACAAACTGCCTGGACTCTGCAAGAGGCTGATGTTATaGAAAACACATAGCGGGGGACAATTCCAGTTTGAGAAACTGAAG | + |
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Preference number: 5 (lower is better) Translates to: PTQDKLPGLCKRLML*KTHSGGQFQFEKLK Trigger: CTTCAGTTTCTCAAACTGGAATTGTCCCCCGCTATGTGTTTTTCATAACATCAGCCTCTTGCAGAGTCCAGGCAGTTTGTCTTGTGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS TCA 90 bp | TGGATCATCCCACACAAGACAAACTGCCTGGACTCTGCAAGAGGCTaGTGTTATGAAAAACACATAGCGGGGGACAATTCCAGTTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: WIIPHKTNCLDSARG*CYEKHIAGDNSSLR Trigger: TCTCAAACTGGAATTGTCCCCCGCTATGTGTTTTTCATAACATCAGCCTCTTGCAGAGTCCAGGCAGTTTGTCTTGTGTGGGATGATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS-3UTR CAA 90 bp | AATGAGACAACCTTTAAAGTCTTACTTGCTCTCAGAGCAAGCCCCAATTCAACCTCCACTTCGCAGAACTaGCCAGTCCTACTCTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NETTFKVLLALRASPNSTSTSQN*PVLLLS Trigger: GCTCAAGAGTAGGACTGGCAAGTTCTGCGAAGTGGA...GGTTGAATTGGGGCTTGCTCTGAGAGCAAGTAAGACTTTAAAGGTTGTCTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS CCA 90 bp | TTGATGAAAAATGCCATTTCTGAGGAGGATACTCAAACAGGGAGGTaGGTAGGTAACTATCAGTGTATCAGGACAGGTAAACCTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LMKNAISEEDTQTGR*VGNYQCIRTGKPQA Trigger: GGCCTGAGGTTTACCTGTCCTGATACACTGATAGTTACCTACCCACCTCCCTGTTTGAGTATCCTCCTCAGAAATGGCATTTTTCATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000540736.1 |
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| CDS-3UTR CAA 90 bp | AATGAGACAACCTTTAAAGTCTTACTTGCTCTCAGAGCAAGCCCCAATTCAACCCTCATCTGCCTGCTTTaGTTCTCCATTTCCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: NETTFKVLLALRASPNSTLICLL*FSISSK Trigger: CTTGCTGGAAATGGAGAACAAAAGCAGGCAGATGAG...GGTTGAATTGGGGCTTGCTCTGAGAGCAAGTAAGACTTTAAAGGTTGTCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS CCA 72 bp | CCTCCGCCGGGCCCTCCTCGCCCAACCAGGGGGCGATaGGCGCTCCCCGCGGCCGGCCTCGCTAAAGATCCC | + |
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Preference number: 6 (lower is better) Translates to: PPPGPPRPTRGR*ALPAAGLAKDP Trigger: GGGATCTTTAGCGAGGCCGGCCGCGGGGAGCGCCCATCGCCCCCTGGTTGGGCGAGGAGGGCCCGGCGGAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540501.1 |
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| CDS CCA 72 bp | CCGGAAATGCCACGTGACCGCGAGGGCGCTTGGGCTTaGGCTGGACAGGCCGGGGATCTCACCGCGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: PEMPRDREGAWA*AGQAGDLTAAG Trigger: GCCCGCCGCGGTGAGATCCCCGGCCTGTCCAGCCCAAGCCCAAGCGCCCTCGCGGTCACGTGGCATTTCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | CCTTCGCCCGCGCATCGGGATGGGGGTCCTAGCCGGTaGGAGCTGCCTGTCCCTCGAGCGCCAGCTACCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSPAHRDGGPSR*ELPVPRAPATR Trigger: GCGGGTAGCTGGCGCTCGAGGGACAGGCAGCTCCCACCGGCTAGGACCCCCATCCCGATGCGCGGGCGAAGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CAA 90 bp | CTGGACAGGCCGGGGATCTCACCGCGGCGGGCCCGGCTGTCCCGCTaGGGCGTCCTCAGTGGAACCGCACACCCTTTCTCAGCGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LDRPGISPRRARLSR*GVLSGTAHPFSARR Trigger: CCGGCGCGCTGAGAAAGGGTGTGCGGTTCCACTGAGGACGCCCAAGCGGGACAGCCGGGCCCGCCGCGGTGAGATCCCCGGCCTGTCCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 72 bp | CCGCGCATCGGGATGGGGGTCCTAGCCGGTGGGAGCTaGCTGTCCCTCGAGCGCCAGCTACCCGCGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRIGMGVLAGGS*LSLERQLPALS Trigger: GGACAACGCGGGTAGCTGGCGCTCGAGGGACAGGCAGCTCCCACCGGCTAGGACCCCCATCCCGATGCGCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | GCGGCGGGCCCGGCTGTCCCGCTTGGGCGTCCTCAGTaGAACCGCACACCCTTTCTCAGCGCGCCGGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: AAGPAVPLGRPQ*NRTPFLSAPVV Trigger: AACGACCGGCGCGCTGAGAAAGGGTGTGCGGTTCCACTGAGGACGCCCAAGCGGGACAGCCGGGCCCGCCGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CAA 90 bp | GTCGGGGTCTGTAGCTGTGTCGCCGGCGGCTGCGGGGCCTCTGGGTaGCTTTCCCTCTCGCTCCCGAGTGCCGCGAGTTCCAGGCGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VGVCSCVAGGCGASG*LSLSLPSAASSRRS Trigger: GGACCGCCTGGAACTCGCGGCACTCGGGAGCGAGAGGGAAAGCAACCCAGAGGCCCCGCAGCCGCCGGCGACACAGCTACAGACCCCGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 72 bp | GCTGCAGTCGGGGTCTGTAGCTGTGTCGCCGGCGGCTaGGGGGCCTCTGGGTTGCTTTCCCTCTCGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: AAVGVCSCVAGG*GASGLLSLSLP Trigger: CGGGAGCGAGAGGGAAAGCAACCCAGAGGCCCCGCAGCCGCCGGCGACACAGCTACAGACCCCGACTGCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | CGGGGATCTCACCGCGGCGGGCCCGGCTGTCCCGCTTaGGCGTCCTCAGTGGAACCGCACACCCTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RGSHRGGPGCPA*ASSVEPHTLSQ Trigger: CTGAGAAAGGGTGTGCGGTTCCACTGAGGACGCCCAAGCGGGACAGCCGGGCCCGCCGCGGTGAGATCCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CAA 72 bp | CCGGGGATCTCACCGCGGCGGGCCCGGCTGTCCCGCTaGGGCGTCCTCAGTGGAACCGCACACCCTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGISPRRARLSR*GVLSGTAHPFS Trigger: TGAGAAAGGGTGTGCGGTTCCACTGAGGACGCCCAAGCGGGACAGCCGGGCCCGCCGCGGTGAGATCCCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 72 bp | GTAGCTGTGTCGCCGGCGGCTGCGGGGCCTCTGGGTTaGTTTCCCTCTCGCTCCCGAGTGCCGCGAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: VAVSPAAAGPLG*FPSRSRVPRVP Trigger: TGGAACTCGCGGCACTCGGGAGCGAGAGGGAAAGCAACCCAGAGGCCCCGCAGCCGCCGGCGACACAGCTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CAA 72 bp | TGTAGCTGTGTCGCCGGCGGCTGCGGGGCCTCTGGGTaGCTTTCCCTCTCGCTCCCGAGTGCCGCGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CSCVAGGCGASG*LSLSLPSAASS Trigger: GGAACTCGCGGCACTCGGGAGCGAGAGGGAAAGCAACCCAGAGGCCCCGCAGCCGCCGGCGACACAGCTACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 72 bp | TCGGCCCGGCCCTCCTGCCTCCTGGCTGTTAGGTTCTaGATGTTCCGGAAATGCCACGTGACCGCGAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: SARPSCLLAVRF*MFRKCHVTARA Trigger: CGCCCTCGCGGTCACGTGGCATTTCCGGAACATTCAGAACCTAACAGCCAGGAGGCAGGAGGGCCGGGCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 72 bp | GGGAGGAGCGAACTTCTGCGACACGGATTGGTCTTTTaGACTGCCAATCGTAGCCGCGCTGGCCGCGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: GRSELLRHGLVF*TANRSRAGRAH Trigger: ATGGGCGCGGCCAGCGCGGCTACGATTGGCAGTGCAAAAGACCAATCCGTGTCGCAGAAGTTCGCTCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CAA 90 bp | TCAGGCTCCACGAATGGAGGGAGGAGCGAACTTCTGCGACACGGATaGGTCTTTTGCACTGCCAATCGTAGCCGCGCTGGCCGCGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: SGSTNGGRSELLRHG*VFCTANRSRAGRAH Trigger: ATGGGCGCGGCCAGCGCGGCTACGATTGGCAGTGCAAAAGACCAATCCGTGTCGCAGAAGTTCGCTCCTCCCTCCATTCGTGGAGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 72 bp | TGGCTGTTAGGTTCTGAATGTTCCGGAAATGCCACGTaGCCGCGAGGGCGCTTGGGCTTGGGCTGGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: WLLGSECSGNAT*PRGRLGLGWTG Trigger: GCCTGTCCAGCCCAAGCCCAAGCGCCCTCGCGGTCACGTGGCATTTCCGGAACATTCAGAACCTAACAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 72 bp | GGGCTGCCGGACTCCATGTCGGAACCGCCTTCAGAATaGGAGCGATTCCAATTGGGCGGAGGGTTGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: GLPDSMSEPPSE*ERFQLGGGLPT Trigger: AGTTGGCAACCCTCCGCCCAATTGGAATCGCTCTCATTCTGAAGGCGGTTCCGACATGGAGTCCGGCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 72 bp | GCCAATCGTAGCCGCGCTGGCCGCGCCCATTGGTTCTaGTCGTTCTGGAAATTTCCACCTCTCCCATTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ANRSRAGRAHWF*SFWKFPPLPLG Trigger: GCCCAATGGGAGAGGTGGAAATTTCCAGAACGATCAGAACCAATGGGCGCGGCCAGCGCGGCTACGATTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | CGAATGGAGGGAGGAGCGAACTTCTGCGACACGGATTaGTCTTTTGCACTGCCAATCGTAGCCGCGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RMEGGANFCDTD*SFALPIVAALA Trigger: GGCCAGCGCGGCTACGATTGGCAGTGCAAAAGACCAATCCGTGTCGCAGAAGTTCGCTCCTCCCTCCATTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CAA 72 bp | ACGAATGGAGGGAGGAGCGAACTTCTGCGACACGGATaGGTCTTTTGCACTGCCAATCGTAGCCGCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: TNGGRSELLRHG*VFCTANRSRAG Trigger: GCCAGCGCGGCTACGATTGGCAGTGCAAAAGACCAATCCGTGTCGCAGAAGTTCGCTCCTCCCTCCATTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 72 bp | TGCTTTTGTTCTCCATTTCCAGCAAGGCCGCCTCTCTaGCTCTACGTACTCGCTGAGTGCCTGGGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: CFCSPFPARPPL*LYVLAECLGVL Trigger: AAGGACCCCCAGGCACTCAGCGAGTACGTAGAGTCAGAGAGGCGGCCTTGCTGGAAATGGAGAACAAAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000540887.1 |
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| CDS CCA 72 bp | GGTTCTGATCGTTCTGGAAATTTCCACCTCTCCCATTaGGCTGCCGGACTCCATGTCGGAACCGCCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GSDRSGNFHLSH*AAGLHVGTAFR Trigger: TCTGAAGGCGGTTCCGACATGGAGTCCGGCAGCCCAATGGGAGAGGTGGAAATTTCCAGAACGATCAGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | TCCTTCAGCTCATTGACCCATCTCAGGCTCCACGAATaGAGGGAGGAGCGAACTTCTGCGACACGGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: SFSSLTHLRLHE*REERTSATRIG Trigger: ACCAATCCGTGTCGCAGAAGTTCGCTCCTCCCTCCATTCGTGGAGCCTGAGATGGGTCAATGAGCTGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | CAATTGGGCGGAGGGTTGCCAACTCTTTGCGCTGATTaGTTTAAATCGCTGCCCTTCAAAAGGCCGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QLGGGLPTLCAD*FKSLPFKRPGF Trigger: GAAACCCGGCCTTTTGAAGGGCAGCGATTTAAACCAATCAGCGCAAAGAGTTGGCAACCCTCCGCCCAATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS GCA 72 bp | GAGCGATTCCAATTGGGCGGAGGGTTGCCAACTCTTTaGGCTGATTGGTTTAAATCGCTGCCCTTCAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: ERFQLGGGLPTL*ADWFKSLPFKR Trigger: CCTTTTGAAGGGCAGCGATTTAAACCAATCAGCGCAAAGAGTTGGCAACCCTCCGCCCAATTGGAATCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS CCA 72 bp | CCCTTGGACAAGCTCAGTACAGGCAACTCAAGCATGTaGACTTCCAACTCTAATGCCTCACCCAGCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: PLDKLSTGNSSM*TSNSNASPSTK Trigger: TTTGGTGCTGGGTGAGGCATTAGAGTTGGAAGTCCACATGCTTGAGTTGCCTGTACTGAGCTTGTCCAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS GCA 72 bp | CTTCAGAATGAGAGCGATTCCAATTGGGCGGAGGGTTaGCAACTCTTTGCGCTGATTGGTTTAAATCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQNESDSNWAEG*QLFALIGLNRC Trigger: GCAGCGATTTAAACCAATCAGCGCAAAGAGTTGGCAACCCTCCGCCCAATTGGAATCGCTCTCATTCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000358794.9 |
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| CDS TCA 72 bp | CCACACAAGACAAACTGCCTGGACTCTGCAAGAGGCTaGTGTTATGAAAAACACATAGCGGGGGACAATTCC | + |
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Preference number: 6 (lower is better) Translates to: PHKTNCLDSARG*CYEKHIAGDNS Trigger: GGAATTGTCCCCCGCTATGTGTTTTTCATAACATCAGCCTCTTGCAGAGTCCAGGCAGTTTGTCTTGTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS TCA 72 bp | AACAGAGGGGACAACATCAGGAAAGACAACTCCAGATaGTGGATCATCCCACACAAGACAAACTGCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: NRGDNIRKDNSR*WIIPHKTNCLD Trigger: GTCCAGGCAGTTTGTCTTGTGTGGGATGATCCATCATCTGGAGTTGTCTTTCCTGATGTTGTCCCCTCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS TCA 72 bp | GACAAACTGCCTGGACTCTGCAAGAGGCTGATGTTATaGAAAACACATAGCGGGGGACAATTCCAGTTTGAG | + |
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Preference number: 6 (lower is better) Translates to: DKLPGLCKRLML*KTHSGGQFQFE Trigger: CTCAAACTGGAATTGTCCCCCGCTATGTGTTTTTCATAACATCAGCCTCTTGCAGAGTCCAGGCAGTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS CCA 72 bp | GAAACTGAAGAGTACATGACAACTAGACAAAATGCGTaGGCCTTGGTCCTGAGAGCTTTGGAATCCAAAACC | + |
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Preference number: 6 (lower is better) Translates to: ETEEYMTTRQNA*ALVLRALESKT Trigger: GGTTTTGGATTCCAAAGCTCTCAGGACCAAGGCCCACGCATTTTGTCTAGTTGTCATGTACTCTTCAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS CCA 72 bp | CCAGATGATGGATCATCCCACACAAGACAAACTGCCTaGACTCTGCAAGAGGCTGATGTTATGAAAAACACA | + |
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Preference number: 6 (lower is better) Translates to: PDDGSSHTRQTA*TLQEADVMKNT Trigger: TGTGTTTTTCATAACATCAGCCTCTTGCAGAGTCCAGGCAGTTTGTCTTGTGTGGGATGATCCATCATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS CAA 72 bp | GAAGAGTACATGACAACTAGACAAAATGCGTGGGCCTaGGTCCTGAGAGCTTTGGAATCCAAAACCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: EEYMTTRQNAWA*VLRALESKTIA Trigger: AGCAATGGTTTTGGATTCCAAAGCTCTCAGGACCAAGGCCCACGCATTTTGTCTAGTTGTCATGTACTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000355603.3 |
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| CDS CCA 72 bp | AATGCCATTTCTGAGGAGGATACTCAAACAGGGAGGTaGGTAGGTAACTATCAGTGTATCAGGACAGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: NAISEEDTQTGR*VGNYQCIRTGK Trigger: TTTACCTGTCCTGATACACTGATAGTTACCTACCCACCTCCCTGTTTGAGTATCCTCCTCAGAAATGGCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540736.1 |
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