RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STIMATE (Homo sapiens)

Ensembl gene IDs: ENSG00000213533

Ensembl transcript IDs: ENST00000355083.11, ENST00000464769.1, ENST00000467979.1, ENST00000477591.1, ENST00000482155.1, ENST00000485356.1

Found 394 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCACAGCCACGGTGAGGAGACCCACCCACGGTCTGTGTGCCTGTaGTTCCTTCCACCTTGCCACTCGGTGGTCGGACACGGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: AHSHGEETHPRSVCL*FLPPCHSVVGHGAG
Trigger: CCCTGCCCCGTGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCACAGGCACACAGACCGTGGGTGGGTCTCCTCACCGTGGCTGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp CAGGGAGGGAGGGCAGCTCGGGAGGAAGTCCTGACCACAGCCCTCTaGTCTGCTCTCATGGGATGGTGCACCACGGAAGAGCCCCCAGTG +
Preference number: 1 (lower is better)
Translates to: QGGRAAREEVLTTAL*SALMGWCTTEEPPV
Trigger: CACTGGGGGCTCTTCCGTGGTGCACCATCCCATGAGAGCAGATCAGAGGGCTGTGGTCAGGACTTCCTCCCGAGCTGCCCTCCCTCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp AGGGAGGGCAGCTCGGGAGGAAGTCCTGACCACAGCCCTCTGATCTaGTCTCATGGGATGGTGCACCACGGAAGAGCCCCCAGTGACTGC +
Preference number: 1 (lower is better)
Translates to: REGSSGGSPDHSPLI*SHGMVHHGRAPSDC
Trigger: GCAGTCACTGGGGGCTCTTCCGTGGTGCACCATCCCATGAGAGCAGATCAGAGGGCTGTGGTCAGGACTTCCTCCCGAGCTGCCCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp ACCCACGGTCTGTGTGCCTGTGCTTCCTTCCACCTTGCCACTCGGTaGTCGGACACGGGGCAGGGCCTCAGGTCCCTCACAACACTGTCT +
Preference number: 1 (lower is better)
Translates to: THGLCACASFHLATR*SDTGQGLRSLTTLS
Trigger: AGACAGTGTTGTGAGGGACCTGAGGCCCTGCCCCGTGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCACAGGCACACAGACCGTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp CCTTGCACTGCCTATCTTAGCCTGGCTGCGAAAAGGCCAGTGAACTaGAAGGGCAGAGTGAGCTGCCAGCTGGGCGCTGCTCCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: PCTAYLSLAAKRPVN*KGRVSCQLGAAPSR
Trigger: CCTGGAGGGAGCAGCGCCCAGCTGGCAGCTCACTCTGCCCTTGCAGTTCACTGGCCTTTTCGCAGCCAGGCTAAGATAGGCAGTGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp GCACCCTGGCTCTGCACTCCTGGTGGAAGATGGGCTGAGAAGGCCTaGCTGATGCTCGCCTTCAAGTCCAGGACAGGTAGGGCTCTGAGA +
Preference number: 1 (lower is better)
Translates to: APWLCTPGGRWAEKA*LMLAFKSRTGRALR
Trigger: TCTCAGAGCCCTACCTGTCCTGGACTTGAAGGCGAGCATCAGGCAGGCCTTCTCAGCCCATCTTCCACCAGGAGTGCAGAGCCAGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp GGAGGGCACAAGTTAAAGCTTGAGGAAGGAGGCCACCAGCACGGCTaGGGGGCCACAGACCCTCCTCTTGCATGTGTGCAAGCTGAGTGG +
Preference number: 1 (lower is better)
Translates to: GGHKLKLEEGGHQHG*GATDPPLACVQAEW
Trigger: CCACTCAGCTTGCACACATGCAAGAGGAGGGTCTGTGGCCCCTCAGCCGTGCTGGTGGCCTCCTTCCTCAAGCTTTAACTTGTGCCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp CTAGAGCTCATGGGCCCTGGGCAGAGCCTTTCCTGTTCCACACTCTaGAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGG +
Preference number: 1 (lower is better)
Translates to: LELMGPGQSLSCSTL*SSWICIQTSCSKLG
Trigger: CCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGGAACAGGAAAGGCTCTGCCCAGGGCCCATGAGCTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp AAGGCCAGTGAACTGCAAGGGCAGAGTGAGCTGCCAGCTGGGCGCTaGTCCCTCCAGGGTTCTGAGGCAGCCTTTGGACATAAACTTGGG +
Preference number: 1 (lower is better)
Translates to: KASELQGQSELPAGR*SLQGSEAAFGHKLG
Trigger: CCCAAGTTTATGTCCAAAGGCTGCCTCAGAACCCTGGAGGGAGCAGCGCCCAGCTGGCAGCTCACTCTGCCCTTGCAGTTCACTGGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp AGCTCCTTCCTTGCATATTTGGTCAGTGTTTGTAGTGCAACTGAATaGGGACCTCCAGCCGCCAGTGGCCCCCTCGGGCGCTGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: SSFLAYLVSVCSATE*GPPAASGPLGRWLL
Trigger: GAGGAGCCAGCGCCCGAGGGGGCCACTGGCGGCTGGAGGTCCCCATTCAGTTGCACTACAAACACTGACCAAATATGCAAGGAAGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp AGGCTGCAGCAGTGGGGGCTGGGAGGCCAAGACCACTTTAAACCGTaGTTGGAGGCTCTGCAGACAGGCAGACTGCACAGGAGTCTGGTA +
Preference number: 1 (lower is better)
Translates to: RLQQWGLGGQDHFKP*LEALQTGRLHRSLV
Trigger: TACCAGACTCCTGTGCAGTCTGCCTGTCTGCAGAGCCTCCAATCACGGTTTAAAGTGGTCTTGGCCTCCCAGCCCCCACTGCTGCAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp GCACGGCTGAGGGGCCACAGACCCTCCTCTTGCATGTGTGCAAGCTaGGTGGACCAAGAAGCCACCACCACCTGGATCTCACTAACATCC +
Preference number: 1 (lower is better)
Translates to: ARLRGHRPSSCMCAS*VDQEATTTWISLTS
Trigger: GGATGTTAGTGAGATCCAGGTGGTGGTGGCTTCTTGGTCCACTCAGCTTGCACACATGCAAGAGGAGGGTCTGTGGCCCCTCAGCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp TGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCCTACCTTaGTGTTTCCACAGCAGGGAAACGGCTGGGGTCAGCCCATTCCAC +
Preference number: 1 (lower is better)
Translates to: WLPLSLTNHQAVPLP*CFHSRETAGVSPFH
Trigger: GTGGAATGGGCTGACCCCAGCCGTTTCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp ATGGGCCCTGGGCAGAGCCTTTCCTGTTCCACACTCTGCAGCTCCTaGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTCTGACCTT +
Preference number: 1 (lower is better)
Translates to: MGPGQSLSCSTLCSS*ICIQTSCSKLGSDL
Trigger: AAGGTCAGACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGGAACAGGAAAGGCTCTGCCCAGGGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp CGTCCCACCATTTCTCAACACGGTGATGGATGCCATGTGGCCAGGTaGAGAGCTGCACCTCGTAAGGCACCTTGGAGCAGGTGGAGAGGA +
Preference number: 1 (lower is better)
Translates to: RPTISQHGDGCHVAR*RAAPRKAPWSRWRG
Trigger: TCCTCTCCACCTGCTCCAAGGTGCCTTACGAGGTGCAGCTCTTCACCTGGCCACATGGCATCCATCACCGTGTTGAGAAATGGTGGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp CCTGGGCAGAGCCTTTCCTGTTCCACACTCTGCAGCTCCTGGATCTaGATCCAGACCAGCTGCTCCAAGCTTGGGTCTGACCTTCACAGA +
Preference number: 1 (lower is better)
Translates to: PGQSLSCSTLCSSWI*IQTSCSKLGSDLHR
Trigger: TCTGTGAAGGTCAGACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGGAACAGGAAAGGCTCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp CCCCACATTCTACAAGGCAGCTGCTCTGGCCAGTGGGAAGCTCCTTaGACTGCCTATCTTAGCCTGGCTGCGAAAAGGCCAGTGAACTGC +
Preference number: 1 (lower is better)
Translates to: PHILQGSCSGQWEAP*TAYLSLAAKRPVNC
Trigger: GCAGTTCACTGGCCTTTTCGCAGCCAGGCTAAGATAGGCAGTGCAAGGAGCTTCCCACTGGCCAGAGCAGCTGCCTTGTAGAATGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp CCAGCCAACGTCCCACCATTTCTCAACACGGTGATGGATGCCATGTaGCCAGGTGAAGAGCTGCACCTCGTAAGGCACCTTGGAGCAGGT +
Preference number: 1 (lower is better)
Translates to: PANVPPFLNTVMDAM*PGEELHLVRHLGAG
Trigger: ACCTGCTCCAAGGTGCCTTACGAGGTGCAGCTCTTCACCTGGCCACATGGCATCCATCACCGTGTTGAGAAATGGTGGGACGTTGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp CCAAGCAGTGCCCCTACCTTGCTGTTTCCACAGCAGGGAAACGGCTaGGGTCAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCA +
Preference number: 1 (lower is better)
Translates to: PSSAPTLLFPQQGNG*GQPIPQSLSKLPKP
Trigger: TGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTGACCCCAGCCGTTTCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp ATGGTGCACCACGGAAGAGCCCCCAGTGACTGCAGGAGGCACTCCTaGGGATACAGATTTGTGTGTGTACATGTGTGTGCACGTGCACGT +
Preference number: 1 (lower is better)
Translates to: MVHHGRAPSDCRRHS*GYRFVCVHVCARAR
Trigger: ACGTGCACGTGCACACACATGTACACACACAAATCTGTATCCCCAGGAGTGCCTCCTGCAGTCACTGGGGGCTCTTCCGTGGTGCACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp ACATCTGTGGCGAGAGGCTTTCAAAAGGGAGAGTTTGGCCAGGGATaGGCAGCAAGACCCATGAAGCACCGTGACCCAGATGTCAGGGCT +
Preference number: 1 (lower is better)
Translates to: TSVARGFQKGEFGQG*AARPMKHRDPDVRA
Trigger: AGCCCTGACATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGCCACAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR TCA 90 bp TCTGATCTGCTCTCATGGGATGGTGCACCACGGAAGAGCCCCCAGTaGCTGCAGGAGGCACTCCTGGGGATACAGATTTGTGTGTGTACA +
Preference number: 1 (lower is better)
Translates to: SDLLSWDGAPRKSPQ*LQEALLGIQICVCT
Trigger: TGTACACACACAAATCTGTATCCCCAGGAGTGCCTCCTGCAGTCACTGGGGGCTCTTCCGTGGTGCACCATCCCATGAGAGCAGATCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp AGGAATGACACCAGCAAAGTTGCCTCCTACTGTAGTTACAGTCCCTaGTCCTCTCAGCACCCTGGCTCTGCACTCCTGGTGGAAGATGGG +
Preference number: 1 (lower is better)
Translates to: RNDTSKVASYCSYSP*SSQHPGSALLVEDG
Trigger: CCCATCTTCCACCAGGAGTGCAGAGCCAGGGTGCTGAGAGGAGCAGGGACTGTAACTACAGTAGGAGGCAACTTTGCTGGTGTCATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp GTGGTCGGACACGGGGCAGGGCCTCAGGTCCCTCACAACACTGTCTaGGACGACAACAAACAAACACAGCTCCTTCCTTGCATATTTGGT +
Preference number: 1 (lower is better)
Translates to: VVGHGAGPQVPHNTV*DDNKQTQLLPCIFG
Trigger: ACCAAATATGCAAGGAAGGAGCTGTGTTTGTTTGTTGTCGTCCCAGACAGTGTTGTGAGGGACCTGAGGCCCTGCCCCGTGTCCGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp GCTCATCACACCTTAGCAGTGTGGCTTCCTGTTCCTAACCATCCGTaGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCCTACCT +
Preference number: 1 (lower is better)
Translates to: AHHTLAVWLPVPNHP*LPLSLTNHQAVPLP
Trigger: AGGTAGGGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAACAGGAAGCCACACTGCTAAGGTGTGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp CACAAACACACAAGAAAGGGAAGGCCAAACACGAGAGGTGTCCTATaGTCAGACACCCTATTAGACCCCCGTCCCCTGGTCAGCCAGCCA +
Preference number: 1 (lower is better)
Translates to: HKHTRKGRPNTRGVL*SDTLLDPRPLVSQP
Trigger: TGGCTGGCTGACCAGGGGACGGGGGTCTAATAGGGTGTCTGACCATAGGACACCTCTCGTGTTTGGCCTTCCCTTTCTTGTGTGTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp GCGTGTGAAACTTCTAAAAGCCAGCCCCACATTCTACAAGGCAGCTaGTCTGGCCAGTGGGAAGCTCCTTGCACTGCCTATCTTAGCCTG +
Preference number: 1 (lower is better)
Translates to: ACETSKSQPHILQGS*SGQWEAPCTAYLSL
Trigger: CAGGCTAAGATAGGCAGTGCAAGGAGCTTCCCACTGGCCAGAGCAGCTGCCTTGTAGAATGTGGGGCTGGCTTTTAGAAGTTTCACACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp GCTCTGAGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTaGGTTCATGCGCCCAATTCGGACCCAATGTGCTTAAGTGAAACA +
Preference number: 1 (lower is better)
Translates to: ALRGRGQSQGTWFNS*VHAPNSDPMCLSET
Trigger: TGTTTCACTTAAGCACATTGGGTCCGAATTGGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp GAAGTCCAGGATGTCTCCCTTCTAGCTCATCACACCTTAGCAGTGTaGCTTCCTGTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACA +
Preference number: 1 (lower is better)
Translates to: EVQDVSLLAHHTLAV*LPVPNHPWLPLSLT
Trigger: TGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAACAGGAAGCCACACTGCTAAGGTGTGATGAGCTAGAAGGGAGACATCCTGGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp AGCTCTCTCACCCCTGCCTCCCTTAGCCACCTCAGCTTTGGAGGGTaGGAAAAACAGGATCACTTTGTGAGGCACATGTTCTCCAGAATG +
Preference number: 1 (lower is better)
Translates to: SSLTPASLSHLSFGG*EKQDHFVRHMFSRM
Trigger: CATTCTGGAGAACATGTGCCTCACAAAGTGATCCTGTTTTTCTCACCCTCCAAAGCTGAGGTGGCTAAGGGAGGCAGGGGTGAGAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp AAGGAAGGTCCTAAGTGGAGTGGCCTCCTCTGCACTTGTCTCACTTaGAGTCCAGGATGTCTCCCTTCTAGCTCATCACACCTTAGCAGT +
Preference number: 1 (lower is better)
Translates to: KEGPKWSGLLCTCLT*SPGCLPSSSSHLSS
Trigger: ACTGCTAAGGTGTGATGAGCTAGAAGGGAGACATCCTGGACTTCAAGTGAGACAAGTGCAGAGGAGGCCACTCCACTTAGGACCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp GAAAAACCACCACTCTTCAGCTACCTCTTTGTTCCCCAAACCCTCTaGTCACTGGGAAGTGGGCAAAGCCTTCAGATGAGACCATCTGAG +
Preference number: 1 (lower is better)
Translates to: EKPPLFSYLFVPQTL*SLGSGQSLQMRPSE
Trigger: CTCAGATGGTCTCATCTGAAGGCTTTGCCCACTTCCCAGTGAGCAGAGGGTTTGGGGAACAAAGAGGTAGCTGAAGAGTGGTGGTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp GCACTCCTGGGGATACAGATTTGTGTGTGTACATGTGTGTGCACGTaGACGTGCACACACACACACAAACACACAAGAAAGGGAAGGCCA +
Preference number: 1 (lower is better)
Translates to: ALLGIQICVCTCVCT*TCTHTHKHTRKGRP
Trigger: TGGCCTTCCCTTTCTTGTGTGTTTGTGTGTGTGTGTGCACGTGCACGTGCACACACATGTACACACACAAATCTGTATCCCCAGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp ACCTGGTTTAACAGCTGGGTTCATGCGCCCAATTCGGACCCAATGTaGTTAAGTGAAACACGTGCTCATGCAGGTCTAAAAGGAAGGTCC +
Preference number: 1 (lower is better)
Translates to: TWFNSWVHAPNSDPM*LSETRAHAGLKGRS
Trigger: GGACCTTCCTTTTAGACCTGCATGAGCACGTGTTTCACTTAAGCACATTGGGTCCGAATTGGGCGCATGAACCCAGCTGTTAAACCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp TGTCTGGGACGACAACAAACAAACACAGCTCCTTCCTTGCATATTTaGTCAGTGTTTGTAGTGCAACTGAATGGGGACCTCCAGCCGCCA +
Preference number: 1 (lower is better)
Translates to: CLGRQQTNTAPSLHI*SVFVVQLNGDLQPP
Trigger: TGGCGGCTGGAGGTCCCCATTCAGTTGCACTACAAACACTGACCAAATATGCAAGGAAGGAGCTGTGTTTGTTTGTTGTCGTCCCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp GACTTGCAAGGTTCCACCACAGGTGGCTTGGCTGAGGTCCAGATTTaGACAAATCAGATTCATAGCACACAATATCCAGCCAACGTCCCA +
Preference number: 1 (lower is better)
Translates to: DLQGSTTGGLAEVQI*TNQIHSTQYPANVP
Trigger: TGGGACGTTGGCTGGATATTGTGTGCTATGAATCTGATTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 90 bp TTAGCCACCTCAGCTTTGGAGGGTGAGAAAAACAGGATCACTTTGTaGGGCACATGTTCTCCAGAATGCTGTGCAAAACAAATAGGTGAC +
Preference number: 1 (lower is better)
Translates to: LATSALEGEKNRITL*GTCSPECCAKQIGD
Trigger: GTCACCTATTTGTTTTGCACAGCATTCTGGAGAACATGTGCCTCACAAAGTGATCCTGTTTTTCTCACCCTCCAAAGCTGAGGTGGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp GAGATCTATATAACCCAGGGTTTGTTTCACAGCTTTCATAGATTATaGCTCTCCTATCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAA +
Preference number: 1 (lower is better)
Translates to: EIYITQGLFHSFHRL*LSYPLPCLETLGAQ
Trigger: TTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGATAGGAGAGCCATAATCTATGAAAGCTGTGAAACAAACCCTGGGTTATATAGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 90 bp AATTTGTTCATGACCTTGACTTGCAAGGTTCCACCACAGGTGGCTTaGCTGAGGTCCAGATTTGGACAAATCAGATTCATAGCACACAAT +
Preference number: 1 (lower is better)
Translates to: NLFMTLTCKVPPQVA*LRSRFGQIRFIAHN
Trigger: ATTGTGTGCTATGAATCTGATTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp AGTTTATTTCCAATAGTTACAAGAAATTTGTTCATGACCTTGACTTaGAAGGTTCCACCACAGGTGGCTTGGCTGAGGTCCAGATTTGGA +
Preference number: 1 (lower is better)
Translates to: SLFPIVTRNLFMTLT*KVPPQVAWLRSRFG
Trigger: TCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAACAAATTTCTTGTAACTATTGGAAATAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 90 bp TGTTTGGAAGTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTGACATGTCTTGAAAACACACAC +
Preference number: 1 (lower is better)
Translates to: CLEVSKNHILHGRLS*FGSLKRLTCLENTH
Trigger: GTGTGTGTTTTCAAGACATGTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACACTTCCAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467979.1
3UTR CCA 90 bp CTTGGGTCCTCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTaGTCAAATTTAACTAAGATCTCTAATCTGCCAGCAGGAATGCTA +
Preference number: 1 (lower is better)
Translates to: LGSSGNKDLLAKLLS*SNLTKISNLPAGML
Trigger: TAGCATTCCTGCTGGCAGATTAGAGATCTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGAGGACCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTACCTCCAGCCGCCAGTaGCCCCCTCGGGCGCTGGCT +
Preference number: 2 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGTSSRQ*PPRALA
Trigger: AGCCAGCGCCCGAGGGGGCCACTGGCGGCTGGAGGT...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCCTGCGGGATGACCTCTaGACACCAGCGGCTGGCGGG +
Preference number: 2 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVALRDDL*TPAAGG
Trigger: CCCGCCAGCCGCTGGTGTGCAGAGGTCATCCCGCAG...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp AGGAAGGAGGCCACCAGCACGGCTGAGGGGCCACAGACCCTCCTCTaGCATGTGTGCAAGCTGAGTGGACCAAGAAGCCACCACCACCTG +
Preference number: 2 (lower is better)
Translates to: RKEATSTAEGPQTLL*HVCKLSGPRSHHHL
Trigger: CAGGTGGTGGTGGCTTCTTGGTCCACTCAGCTTGCACACATGCAAGAGGAGGGTCTGTGGCCCCTCAGCCGTGCTGGTGGCCTCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCTGCACACCAGCGGCTaGCGGGGCCCTCCCGTCACC +
Preference number: 2 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRLHTSG*RGPPVT
Trigger: GGTGACGGGAGGGCCCCGCCAGCCGCTGGTGTGCAG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCAACGATGCTGCGGGATaGCCTCTGCACACCAGCGGC +
Preference number: 2 (lower is better)
Translates to: LEAPCPACGLESELSHPCNDAAG*PLHTSG
Trigger: GCCGCTGGTGTGCAGAGGTCATCCCGCAGCATCGTT...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp TGGCACCTGATGCTGCGGCTCTGCCCAGGGACCTCCTTCCAGCCCCGCAGCCTCAAGTGGAGATGGACATaGCAAGAGCATGTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: WHLMLRLCPGTSFQPRSLKWRWT*QEHVWL
Trigger: AAGCCAAACATGCTCTTGCCATGTCCATCTCCACTT...GAGGCTGCGGGGCTGGAAGGAGGTCCCTGGGCAGAGCCGCAGCATCAGGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR CAA 90 bp GTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCCTACCTaGCTGTTTCCACAGCAGGGAAACGGCTGGGGTCAGCCCATTCCA +
Preference number: 2 (lower is better)
Translates to: VAASELDKPPSSAPT*LFPQQGNGWGQPIP
Trigger: TGGAATGGGCTGACCCCAGCCGTTTCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp AGCTGCCAGCTGGGCGCTGCTCCCTCCAGGGTTCTGAGGCAGCCTTaGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTA +
Preference number: 2 (lower is better)
Translates to: SCQLGAAPSRVLRQP*DINLGLHPTGLHCL
Trigger: TAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTGCCTCAGAACCCTGGAGGGAGCAGCGCCCAGCTGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCGAGGGTAAGGAACGATaGTGCGGGATGACCTCTGCA +
Preference number: 2 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPEGKER*CGMTSA
Trigger: TGCAGAGGTCATCCCGCAGCATCGTTCCTTACCCTC...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTTCCTTCCACCTTaGCACTCGGTGGTCGGACAC +
Preference number: 2 (lower is better)
Translates to: GLEAPCPACGLESELSHPCFLPP*HSVVGH
Trigger: GTGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCA...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCCACCCACGGTCTGTGTaGCTGTGCTTCCTTCCACCT +
Preference number: 2 (lower is better)
Translates to: GLEAPCPACGLESELSHPHPRSV*LCFLPP
Trigger: AGGTGGAAGGAAGCACAGGCACACAGACCGTGGGTG...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTGCAGCAGTGGGGGCTaGGAGGCCAAGACCACTTTA +
Preference number: 2 (lower is better)
Translates to: LEAPCPACGLESELSHPCCSSGG*EAKTTL
Trigger: TAAAGTGGTCTTGGCCTCCCAGCCCCCACTGCTGCA...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCAAGGAAGGTCCTAAGTaGAGTGGCCTCCTCTGCACT +
Preference number: 2 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPKEGPK*SGLLCT
Trigger: AGTGCAGAGGAGGCCACTCCACTTAGGACCTTCCTT...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp GCAGTGTGGCTTCCTGTTCCTAACCATCCGTGGCTGCCTCTGAGCTaGACAAACCACCAAGCAGTGCCCCTACCTTGCTGTTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: AVWLPVPNHPWLPLS*TNHQAVPLPCCFHS
Trigger: GCTGTGGAAACAGCAAGGTAGGGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAACAGGAAGCCACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTGCACTTGTCTCACTTaGAGTCCAGGATGTCTCCCT +
Preference number: 2 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPCTCLT*SPGCLP
Trigger: AGGGAGACATCCTGGACTTCAAGTGAGACAAGTGCA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp GGAGGGAACACATCTGTGGCGAGAGGCTTTCAAAAGGGAGAGTTTGGCCAGGGAACCCATGAAGCACCGTaGCCCAGATGTCAGGGCTTC +
Preference number: 2 (lower is better)
Translates to: GGNTSVARGFQKGEFGQGTHEAP*PRCQGF
Trigger: GAAGCCCTGACATCTGGGTCACGGTGCTTCATGGGT...TCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGCCACAGATGTGTTCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR-3UTR TCA 90 bp GAGGGAACACATCTGTGGCGAGAGGCTTTCAAAAGGGAGAGTTTGGCCAGGGATGGGCAGCAAGACCCATaGAGCACCGTGACCCAGATG +
Preference number: 2 (lower is better)
Translates to: EGTHLWREAFKRESLARDGQQDP*STVTQM
Trigger: CATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCC...ATCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGCCACAGATGTGTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR-3UTR GCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAACTGCCAGCTGGGCGCTaGTCCCTCCAGGGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKLPAGR*SLQGSE
Trigger: CTCAGAACCCTGGAGGGAGCAGCGCCCAGCTGGCAG...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTGTAGTGCAACTGAATaGGGACCTCCAGCCGCCAGT +
Preference number: 2 (lower is better)
Translates to: LEAPCPACGLESELSHPCCSATE*GPPAAS
Trigger: ACTGGCGGCTGGAGGTCCCCATTCAGTTGCACTACA...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CTCAGTAGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGCGATGCGTCACCTGGATCTaGTCTCAACCGCCGGGGCTG +
Preference number: 2 (lower is better)
Translates to: LSRSHSNRGQKEGTHLWRCVTWI*SQPPGL
Trigger: CAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCA...TCGCCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCTACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR-3UTR CCA 90 bp CATCTGTGGCGAGAGGCTTTCAAAAGGGAGAGTTTGGCCAGGGATGGGCAGCAAACACCATGCGTCACCTaGATCTGGTCTCAACCGCCG +
Preference number: 2 (lower is better)
Translates to: HLWREAFKRESLARDGQQTPCVT*IWSQPP
Trigger: CGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGT...TTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGCCACAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR CAA 90 bp TCCAGACCAGCTGCTCCAAGCTTGGGTCTGACCTTCACAGAACCATaGGGTTTGCTGATTCTAGAGAAGGGCCATCCTCCTTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: SRPAAPSLGLTFTEP*GLLILEKGHPPSLP
Trigger: GGGGAGGGAAGGAGGATGGCCCTTCTCTAGAATCAGCAAACCCAATGGTTCTGTGAAGGTCAGACCCAAGCTTGGAGCAGCTGGTCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp GAAGAGCCCCCAGTGACTGCAGGAGGCACTCCTGGGGATACAGATTaGTGTGTGTACATGTGTGTGCACGTGCACGTGCACACACACACA +
Preference number: 2 (lower is better)
Translates to: EEPPVTAGGTPGDTD*CVYMCVHVHVHTHT
Trigger: TGTGTGTGTGTGCACGTGCACGTGCACACACATGTACACACACAAATCTGTATCCCCAGGAGTGCCTCCTGCAGTCACTGGGGGCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTCCAGCCCACACCCCATaGAAGGCAAATAAACCCATT +
Preference number: 2 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGPAHTP*KANKPI
Trigger: AATGGGTTTATTTGCCTTTCATGGGGTGTGGGCTGG...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCGACCACTTTAAACCGTaGTTGGAGGCTCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: LEAPCPACGLESELSHPCDHFKP*LEALQT
Trigger: TGTCTGCAGAGCCTCCAATCACGGTTTAAAGTGGTC...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGACTCCTGGTGGAAGATaGGCTGAGAAGGCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRTPGGR*AEKACL
Trigger: CAGGCAGGCCTTCTCAGCCCATCTTCCACCAGGAGT...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp CACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTaGGGTCTGACCTTCACAGAACCATTGGGTTTGCTGATTCTAGAG +
Preference number: 2 (lower is better)
Translates to: HSAAPGSASRPAAPS*GLTFTEPLGLLILE
Trigger: CTCTAGAATCAGCAAACCCAATGGTTCTGTGAAGGTCAGACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCACACAGCTCCTTCCTTaGATATTTGGTCAGTGTTTG +
Preference number: 2 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPTQLLP*IFGQCL
Trigger: CAAACACTGACCAAATATGCAAGGAAGGAGCTGTGT...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGTTCCCCAAACCCTCTaGTCACTGGGAAGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRVPQTL*SLGSGQ
Trigger: TTGCCCACTTCCCAGTGAGCAGAGGGTTTGGGGAAC...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAAGAGCTCATGGGCCCTaGGCAGAGCCTTTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKRAHGP*AEPFLF
Trigger: GAACAGGAAAGGCTCTGCCCAGGGCCCATGAGCTCT...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCCACCACAGGTGGCTTaGCTGAGGTCCAGATTTGGA +
Preference number: 2 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRPPQVA*LRSRFG
Trigger: TCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp ATTCTCACTAGCGAAGAAGTGGAGATGGACATGGCAAGAGCATGTTaGGCTTTTCACTGGGCAGTTGCTGGCTCCCACTCCTGCCATGAG +
Preference number: 2 (lower is better)
Translates to: ILTSEEVEMDMARAC*AFHWAVAGSHSCHE
Trigger: CTCATGGCAGGAGTGGGAGCCAGCAACTGCCCAGTGAAAAGCCAAACATGCTCTTGCCATGTCCATCTCCACTTCTTCGCTAGTGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCAACAGGATCACTTTGTaGGGCACATGTTCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: LEAPCPACGLESELSHPCNRITL*GTCSPE
Trigger: TTCTGGAGAACATGTGCCTCACAAAGTGATCCTGTT...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCAAACCACCAAGCAGTaGCCCTACCTTGCTGTTTCC +
Preference number: 2 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRQTTKQ*PYLAVS
Trigger: GGAAACAGCAAGGTAGGGGCACTGCTTGGTGGTTTG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAACACTCTGCAGCTCCTaGATCTGCATCCAGACCAGC +
Preference number: 2 (lower is better)
Translates to: PLDINLGLHPTGLHCLRETLCSS*ICIQTS
Trigger: GCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGT...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGTGTGTGCAAGCTGAGTaGACCAAGAAGCCACCACCA +
Preference number: 2 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRCVQAE*TKKPPP
Trigger: TGGTGGTGGCTTCTTGGTCCACTCAGCTTGCACACA...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp CTGTCTGGGACGACAACAAACAAACACAGCTCCTTCCTTGCATATTaGGTCAGTGTTTGTAGTGCAACTGAATGGGGACCTCCAGCCGCC +
Preference number: 2 (lower is better)
Translates to: LSGTTTNKHSSFLAY*VSVCSATEWGPPAA
Trigger: GGCGGCTGGAGGTCCCCATTCAGTTGCACTACAAACACTGACCAAATATGCAAGGAAGGAGCTGTGTTTGTTTGTTGTCGTCCCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAGATGCCATGAGGGAATaGCCGTCCTGTCAGGAACAT +
Preference number: 2 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQDAMRE*PSCQEH
Trigger: ATGTTCCTGACAGGACGGTCATTCCCTCATGGCATC...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAACACAGGTGGCTTGGCTaGGGTCCAGATTTGGACAAA +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKHRWLG*GPDLDK
Trigger: TTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTG...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAGCACAAGTTAAAGCTTaGGGAAGGAGGCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKAQVKA*GRRPPA
Trigger: TGCTGGTGGCCTCCTTCCTCAAGCTTTAACTTGTGC...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAATCCTGTTCCACACTCTaGAGCTCCTGGATCTGCATC +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKSCSTL*SSWICI
Trigger: GATGCAGATCCAGGAGCTGCAGAGTGTGGAACAGGA...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp TCTGAGACAAGTGCTGACATGAGGAATGCCCAGGATGTGGCACATGGGCCAAGAATGTGGGCTACTCACTaGTTATACTCTACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: SETSADMRNAQDVAHGPRMWATH*LYSTSP
Trigger: TGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACAT...TCTTGGCCCATGTGCCACATCCTGGGCATTCCTCATGTCAGCACTTGTCTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR CCA 90 bp ACAAGGATGTGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGTCCTTGTTTGGCTTTTCACTaGGCAGTTGCTGGCTCCCAC +
Preference number: 2 (lower is better)
Translates to: TRMWATHCLYSTSPTRCPCLAFH*AVAGSH
Trigger: GTGGGAGCCAGCAACTGCCCAGTGAAAAGCCAAACA...AGGACATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACATCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR TCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGGGCCTGTGGCCATGCTaGGGAGTAGTGACCATTCCC +
Preference number: 2 (lower is better)
Translates to: TGCSNQNETGGEELELSQGLWPC*GVVTIP
Trigger: GGGAATGGTCACTACTCCTCAGCATGGCCACAGGCC...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp TTATACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATCTCCCACTCCTGCCATaGGGCTTCGTAAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: LYSTSPTRCPPQRRTCFNLPLLP*GFVRFL
Trigger: AAGGAACCTTACGAAGCCTCATGGCAGGAGTGGGAG...ATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR GCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATGGTAAGGAACGATGCTaGGGGATGACCTCTGCACAC +
Preference number: 2 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNGKERC*GMTSAH
Trigger: GTGTGCAGAGGTCATCCCGCAGCATCGTTCCTTACC...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATGCAGTGCCCCTACCTTaGTGTTTCCACAGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNAVPLP*CFHSRE
Trigger: TTCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGC...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR GCA 90 bp TATACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTTTTTCACTGGGCAGTTaGTGGCTCCCACTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: YTLPPQHDVLLRDGLALIFSLGS*WLPLLP
Trigger: TGGCAGGAGTGGGAGCCAGCAACTGCCCAGTGAAAA...AATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGTATA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR CCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGCACCTTGCCACTCGGTaGTCGGACACGGGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKHLATR*SDTGQG
Trigger: GCCCTGCCCCGTGTCCGACCACCGAGTGGCAAGGTG...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp AGGGACAAGGATGTGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGGCGAAGAAGTGGAGATaGACATGGCAAGAGCATGTT +
Preference number: 2 (lower is better)
Translates to: RDKDVGYSLLILYLPNTMAKKWR*TWQEHV
Trigger: AACATGCTCTTGCCATGTCCATCTCCACTTCTTCGC...CATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACATCCTTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR GCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAATTCATGACCTTGACTTaGAAGGTTCCACCACAGGTG +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKFMTLT*KVPPQV
Trigger: CACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAA...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCGCTAAGCTCCTTTCTTaGTCAAATTTAACTAAGATC +
Preference number: 2 (lower is better)
Translates to: GLEAPCPACGLESELSHPAKLLS*SNLTKI
Trigger: GATCTTAGTTAAATTTGACCAAGAAAGGAGCTTAGC...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAACGAGAGGTGTCCTATaGTCAGACACCCTATTAGAC +
Preference number: 2 (lower is better)
Translates to: PLDINLGLHPTGLHCLRETRGVL*SDTLLD
Trigger: GTCTAATAGGGTGTCTGACCATAGGACACCTCTCGT...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATCCCAATGTGCTTAAGTaGAACACGTGCTCATGCAGG +
Preference number: 2 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNPNVLK*NTCSCR
Trigger: CCTGCATGAGCACGTGTTTCACTTAAGCACATTGGG...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAGTCCTGTCAGGAACATaGGTCTTGGTCTTCCTAAAT +
Preference number: 2 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKVLSGT*VLVFLN
Trigger: ATTTAGGAAGACCAAGACTCATGTTCCTGACAGGAC...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAATCAGATGAGACCATCTaGGATCTATATAACCCAGGG +
Preference number: 2 (lower is better)
Translates to: PLDINLGLHPTGLHCLRESDETI*DLYNPG
Trigger: CCCTGGGTTATATAGATCTCAGATGGTCTCATCTGA...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATCCACTAGAGAGCTGCTaGGGAAATACTGGCTACCAT +
Preference number: 2 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNPLESC*GNTGYH
Trigger: ATGGTAGCCAGTATTTCCCCAGCAGCTCTCTAGTGG...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp TCACAACACTGTCTGGGACGACAACAAACAAACACAGCTCCTTCCTaGCATATTTGGTCAGTGTTTGTAGTGCAACTGAATGGGGACCTC +
Preference number: 2 (lower is better)
Translates to: SQHCLGRQQTNTAPS*HIWSVFVVQLNGDL
Trigger: GAGGTCCCCATTCAGTTGCACTACAAACACTGACCAAATATGCAAGGAAGGAGCTGTGTTTGTTTGTTGTCGTCCCAGACAGTGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR TCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGCTCCAAGCTTGGGTCTaGCCTTCACAGAACCATTGG +
Preference number: 2 (lower is better)
Translates to: TGCSNQNETGGEELELSQLQAWV*PSQNHW
Trigger: CCAATGGTTCTGTGAAGGTCAGACCCAAGCTTGGAG...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTACCATAGCTGTGGATaGGAGGGAGCACAAAGTCAA +
Preference number: 2 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNYHSCG*EGAQSQ
Trigger: TTGACTTTGTGCTCCCTCCCATCCACAGCTATGGTA...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp GTGTTTTGTTTGGGTTTAATTATTTCCTCAGTAGAAGTCACAGCAATAGGGGCCGAGTTTGGCCAGGGATaGGCAGCAAGACCCATGAAG +
Preference number: 2 (lower is better)
Translates to: VFCLGLIISSVEVTAIGAEFGQG*AARPMK
Trigger: CTTCATGGGTCTTGCTGCCCATCCCTGGCCAAACTC...GGCCCCTATTGCTGTGACTTCTACTGAGGAAATAATTAAACCCAAACAAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR-3UTR CCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAACCTTCCTTGCATATTTaGTCAGTGTTTGTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: PLDINLGLHPTGLHCLREPSLHI*SVFVVQ
Trigger: TTGCACTACAAACACTGACCAAATATGCAAGGAAGG...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATCCTCACAACACTGTCTaGGACGACAACAAACAAACA +
Preference number: 2 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNPHNTV*DDNKQT
Trigger: TGTTTGTTTGTTGTCGTCCCAGACAGTGTTGTGAGG...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 90 bp AAATTTGTTCATGACCTTGACTTGCAAGGTTCCACCACAGGTGGCTaGGCTGAGGTCCAGATTTGGACAAATCAGATTCATAGCACACAA +
Preference number: 2 (lower is better)
Translates to: KFVHDLDLQGSTTGG*AEVQIWTNQIHSTQ
Trigger: TTGTGTGCTATGAATCTGATTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAACAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CCA 90 bp GTGTTTTGTTTGGGTTTAATTATTTCCTCAGTAGAAGTCACAGCAATAGGGGCCCCACATGGGAAAGAGTaGCCTGGTAATCAGAGTGCA +
Preference number: 2 (lower is better)
Translates to: VFCLGLIISSVEVTAIGAPHGKE*PGNQSA
Trigger: TGCACTCTGATTACCAGGCCACTCTTTCCCATGTGG...GGCCCCTATTGCTGTGACTTCTACTGAGGAAATAATTAAACCCAAACAAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR-3UTR TCA 90 bp TTTGCAAAGTGGATGAACAGCATTCCTATGGCTTGTTTGGAAGTGTCTAAAAACGCGTTTGACATGTCTTaGAAACACACACGTACAGTA +
Preference number: 2 (lower is better)
Translates to: FAKWMNSIPMACLEVSKNAFDMS*KHTRTV
Trigger: TACTGTACGTGTGTGTTTTCAAGACATGTCAAACGC...GTTTTTAGACACTTCCAAACAAGCCATAGGAATGCTGTTCATCCACTTTGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
3UTR TCA 72 bp AAGGGCAGAGAGAGGGTAAGGAACGATGCTGCGGGATaGCCTCTGCACACCAGCGGCTGGCGGGGCCCTCCC +
Preference number: 3 (lower is better)
Translates to: KGRERVRNDAAG*PLHTSGWRGPP
Trigger: GGGAGGGCCCCGCCAGCCGCTGGTGTGCAGAGGTCATCCCGCAGCATCGTTCCTTACCCTCTCTCTGCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CACGGTGAGGAGACCCACCCACGGTCTGTGTGCCTGTaGTTCCTTCCACCTTGCCACTCGGTGGTCGGACAC +
Preference number: 3 (lower is better)
Translates to: HGEETHPRSVCL*FLPPCHSVVGH
Trigger: GTGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCACAGGCACACAGACCGTGGGTGGGTCTCCTCACCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CACAGCCACGGTGAGGAGACCCACCCACGGTCTGTGTaGCTGTGCTTCCTTCCACCTTGCCACTCGGTGGTC +
Preference number: 3 (lower is better)
Translates to: HSHGEETHPRSV*LCFLPPCHSVV
Trigger: GACCACCGAGTGGCAAGGTGGAAGGAAGCACAGGCACACAGACCGTGGGTGGGTCTCCTCACCGTGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp GCGAAAAGGCCAGTGAACTGCAAGGGCAGAGTGAGCTaGCAGCTGGGCGCTGCTCCCTCCAGGGTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: AKRPVNCKGRVS*QLGAAPSRVLR
Trigger: CCTCAGAACCCTGGAGGGAGCAGCGCCCAGCTGGCAGCTCACTCTGCCCTTGCAGTTCACTGGCCTTTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp AGCTCGGGAGGAAGTCCTGACCACAGCCCTCTGATCTaGTCTCATGGGATGGTGCACCACGGAAGAGCCCCC +
Preference number: 3 (lower is better)
Translates to: SSGGSPDHSPLI*SHGMVHHGRAP
Trigger: GGGGGCTCTTCCGTGGTGCACCATCCCATGAGAGCAGATCAGAGGGCTGTGGTCAGGACTTCCTCCCGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp GAACTGCAAGGGCAGAGTGAGCTGCCAGCTGGGCGCTaGTCCCTCCAGGGTTCTGAGGCAGCCTTTGGACAT +
Preference number: 3 (lower is better)
Translates to: ELQGQSELPAGR*SLQGSEAAFGH
Trigger: ATGTCCAAAGGCTGCCTCAGAACCCTGGAGGGAGCAGCGCCCAGCTGGCAGCTCACTCTGCCCTTGCAGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp GCACTCCTGGTGGAAGATGGGCTGAGAAGGCCTGCCTaGTGCTCGCCTTCAAGTCCAGGACAGGTAGGGCTC +
Preference number: 3 (lower is better)
Translates to: ALLVEDGLRRPA*CSPSSPGQVGL
Trigger: GAGCCCTACCTGTCCTGGACTTGAAGGCGAGCATCAGGCAGGCCTTCTCAGCCCATCTTCCACCAGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp AGCACCCTGGCTCTGCACTCCTGGTGGAAGATGGGCTaGGAAGGCCTGCCTGATGCTCGCCTTCAAGTCCAG +
Preference number: 3 (lower is better)
Translates to: STLALHSWWKMG*EGLPDARLQVQ
Trigger: CTGGACTTGAAGGCGAGCATCAGGCAGGCCTTCTCAGCCCATCTTCCACCAGGAGTGCAGAGCCAGGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp GCCTATCTTAGCCTGGCTGCGAAAAGGCCAGTGAACTaGAAGGGCAGAGTGAGCTGCCAGCTGGGCGCTGCT +
Preference number: 3 (lower is better)
Translates to: AYLSLAAKRPVN*KGRVSCQLGAA
Trigger: AGCAGCGCCCAGCTGGCAGCTCACTCTGCCCTTGCAGTTCACTGGCCTTTTCGCAGCCAGGCTAAGATAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp CTCTCAGCACCCTGGCTCTGCACTCCTGGTGGAAGATaGGCTGAGAAGGCCTGCCTGATGCTCGCCTTCAAG +
Preference number: 3 (lower is better)
Translates to: LSAPWLCTPGGR*AEKACLMLAFK
Trigger: CTTGAAGGCGAGCATCAGGCAGGCCTTCTCAGCCCATCTTCCACCAGGAGTGCAGAGCCAGGGTGCTGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp CAGTGGGGGCTGGGAGGCCAAGACCACTTTAAACCGTaGTTGGAGGCTCTGCAGACAGGCAGACTGCACAGG +
Preference number: 3 (lower is better)
Translates to: QWGLGGQDHFKP*LEALQTGRLHR
Trigger: CCTGTGCAGTCTGCCTGTCTGCAGAGCCTCCAATCACGGTTTAAAGTGGTCTTGGCCTCCCAGCCCCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp GGAAAGAGTGGCCTGGTAATCAGAGTGCAGACACCATaGGTCACCTGGATCTGGTCTCAACCGCCGGGGCTG +
Preference number: 3 (lower is better)
Translates to: GKSGLVIRVQTP*VTWIWSQPPGL
Trigger: CAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGTCTGCACTCTGATTACCAGGCCACTCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR CCA 72 bp CTTGCATATTTGGTCAGTGTTTGTAGTGCAACTGAATaGGGACCTCCAGCCGCCAGTGGCCCCCTCGGGCGC +
Preference number: 3 (lower is better)
Translates to: LAYLVSVCSATE*GPPAASGPLGR
Trigger: GCGCCCGAGGGGGCCACTGGCGGCTGGAGGTCCCCATTCAGTTGCACTACAAACACTGACCAAATATGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp AGGGGCCACAGACCCTCCTCTTGCATGTGTGCAAGCTaGGTGGACCAAGAAGCCACCACCACCTGGATCTCA +
Preference number: 3 (lower is better)
Translates to: RGHRPSSCMCAS*VDQEATTTWIS
Trigger: TGAGATCCAGGTGGTGGTGGCTTCTTGGTCCACTCAGCTTGCACACATGCAAGAGGAGGGTCTGTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CATGGGATGGTGCACCACGGAAGAGCCCCCAGTGACTaGAGGAGGCACTCCTGGGGATACAGATTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: HGMVHHGRAPSD*RRHSWGYRFVC
Trigger: ACACACAAATCTGTATCCCCAGGAGTGCCTCCTGCAGTCACTGGGGGCTCTTCCGTGGTGCACCATCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CTACAAGGCAGCTGCTCTGGCCAGTGGGAAGCTCCTTaGACTGCCTATCTTAGCCTGGCTGCGAAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: LQGSCSGQWEAP*TAYLSLAAKRP
Trigger: TGGCCTTTTCGCAGCCAGGCTAAGATAGGCAGTGCAAGGAGCTTCCCACTGGCCAGAGCAGCTGCCTTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp CACGGGGCAGGGCCTCAGGTCCCTCACAACACTGTCTaGGACGACAACAAACAAACACAGCTCCTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: HGAGPQVPHNTV*DDNKQTQLLPC
Trigger: GCAAGGAAGGAGCTGTGTTTGTTTGTTGTCGTCCCAGACAGTGTTGTGAGGGACCTGAGGCCCTGCCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp GCCCCTACCTTGCTGTTTCCACAGCAGGGAAACGGCTaGGGTCAGCCCATTCCACAGTCACTCAGCAAACTC +
Preference number: 3 (lower is better)
Translates to: APTLLFPQQGNG*GQPIPQSLSKL
Trigger: GAGTTTGCTGAGTGACTGTGGAATGGGCTGACCCCAGCCGTTTCCCTGCTGTGGAAACAGCAAGGTAGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp AAGTTAAAGCTTGAGGAAGGAGGCCACCAGCACGGCTaGGGGGCCACAGACCCTCCTCTTGCATGTGTGCAA +
Preference number: 3 (lower is better)
Translates to: KLKLEEGGHQHG*GATDPPLACVQ
Trigger: TTGCACACATGCAAGAGGAGGGTCTGTGGCCCCTCAGCCGTGCTGGTGGCCTCCTTCCTCAAGCTTTAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp AGCCTTTCCTGTTCCACACTCTGCAGCTCCTGGATCTaGATCCAGACCAGCTGCTCCAAGCTTGGGTCTGAC +
Preference number: 3 (lower is better)
Translates to: SLSCSTLCSSWI*IQTSCSKLGSD
Trigger: GTCAGACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGGAACAGGAAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp ACCAGCAAAGTTGCCTCCTACTGTAGTTACAGTCCCTaGTCCTCTCAGCACCCTGGCTCTGCACTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: TSKVASYCSYSP*SSQHPGSALLV
Trigger: CACCAGGAGTGCAGAGCCAGGGTGCTGAGAGGAGCAGGGACTGTAACTACAGTAGGAGGCAACTTTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CCCGCAGCCTCAGGGACAAGGATGTGGGCTACTCACTaGTTATACTCTACCTCCCCAACACGATGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: PAASGTRMWATH*LYSTSPTRCPP
Trigger: AGGAGGACATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACATCCTTGTCCCTGAGGCTGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR CCA 72 bp GGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTaGGTTCATGCGCCCAATTCGGACCCAATGTGCTTA +
Preference number: 3 (lower is better)
Translates to: GRGQSQGTWFNS*VHAPNSDPMCL
Trigger: TAAGCACATTGGGTCCGAATTGGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp GCGAGAGGCTTTCAAAAGGGAGAGTTTGGCCAGGGATaGGCAGCAAGACCCATGAAGCACCGTGACCCAGAT +
Preference number: 3 (lower is better)
Translates to: ARGFQKGEFGQG*AARPMKHRDPD
Trigger: ATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR CCA 72 bp CACATCTGTGGCGAGAGGCTTTCAAAAGGGAGAGTTTaGCCAGGGATGGGCAGCAAGACCCATGAAGCACCG +
Preference number: 3 (lower is better)
Translates to: HICGERLSKGRV*PGMGSKTHEAP
Trigger: CGGTGCTTCATGGGTCTTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGCCACAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR GCA 72 bp TGGCCTGGTTCTAGCCACTCTTCCCCACTAGAGAGCTaGTGGGGAAATACTGGCTACCATAGCTGTGGATGG +
Preference number: 3 (lower is better)
Translates to: WPGSSHSSPLES*WGNTGYHSCGW
Trigger: CCATCCACAGCTATGGTAGCCAGTATTTCCCCAGCAGCTCTCTAGTGGGGAAGAGTGGCTAGAACCAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp CCTGGTTCTAGCCACTCTTCCCCACTAGAGAGCTGCTaGGGAAATACTGGCTACCATAGCTGTGGATGGGAG +
Preference number: 3 (lower is better)
Translates to: PGSSHSSPLESC*GNTGYHSCGWE
Trigger: CTCCCATCCACAGCTATGGTAGCCAGTATTTCCCCAGCAGCTCTCTAGTGGGGAAGAGTGGCTAGAACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp ACAAGAAAGGGAAGGCCAAACACGAGAGGTGTCCTATaGTCAGACACCCTATTAGACCCCCGTCCCCTGGTC +
Preference number: 3 (lower is better)
Translates to: TRKGRPNTRGVL*SDTLLDPRPLV
Trigger: GACCAGGGGACGGGGGTCTAATAGGGTGTCTGACCATAGGACACCTCTCGTGTTTGGCCTTCCCTTTCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp CACGGAAGAGCCCCCAGTGACTGCAGGAGGCACTCCTaGGGATACAGATTTGTGTGTGTACATGTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: HGRAPSDCRRHS*GYRFVCVHVCA
Trigger: TGCACACACATGTACACACACAAATCTGTATCCCCAGGAGTGCCTCCTGCAGTCACTGGGGGCTCTTCCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp GTCCCACCATTTCTCAACACGGTGATGGATGCCATGTaGCCAGGTGAAGAGCTGCACCTCGTAAGGCACCTT +
Preference number: 3 (lower is better)
Translates to: VPPFLNTVMDAM*PGEELHLVRHL
Trigger: AAGGTGCCTTACGAGGTGCAGCTCTTCACCTGGCCACATGGCATCCATCACCGTGTTGAGAAATGGTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp GAGATGGACATGGCAAGAGCATGTTTGGCTTTTCACTaGGCAGTTGCTGGCTCCCACTCCTGCCATGAGGCT +
Preference number: 3 (lower is better)
Translates to: EMDMARACLAFH*AVAGSHSCHEA
Trigger: AGCCTCATGGCAGGAGTGGGAGCCAGCAACTGCCCAGTGAAAAGCCAAACATGCTCTTGCCATGTCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR-3UTR CAA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAGTGCTTCCTTCCACCTaGCCACTCGGTGGTCGGACA +
Preference number: 3 (lower is better)
Translates to: PLDINLGLHPTGLHCLREVLPST*PLGGRT
Trigger: TGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCAC...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp ACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTaGTCCAAGCTTGGGTCTGACCTTCACAGAACCATT +
Preference number: 3 (lower is better)
Translates to: TLCSSWICIQTS*SKLGSDLHRTI
Trigger: AATGGTTCTGTGAAGGTCAGACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp ACCTTAGCAGTGTGGCTTCCTGTTCCTAACCATCCGTaGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: TLAVWLPVPNHP*LPLSLTNHQAV
Trigger: CACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAACAGGAAGCCACACTGCTAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCACCTTCACAGAACCATaGGGTTTGCTGATTCTAGAG +
Preference number: 3 (lower is better)
Translates to: GLEAPCPACGLESELSHPTFTEP*GLLILE
Trigger: CTCTAGAATCAGCAAACCCAATGGTTCTGTGAAGGT...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAACGGCCTAGAAGCACCTaGCCCTGCCTGTGGTTTAGA +
Preference number: 3 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQRPRST*PCLWFR
Trigger: TCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCCG...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGTGGCTGCCTCTGAGCTaGACAAACCACCAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRWLPLS*TNHQAV
Trigger: CACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCA...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp ACCCCTGCCTCCCTTAGCCACCTCAGCTTTGGAGGGTaGGAAAAACAGGATCACTTTGTGAGGCACATGTTC +
Preference number: 3 (lower is better)
Translates to: TPASLSHLSFGG*EKQDHFVRHMF
Trigger: GAACATGTGCCTCACAAAGTGATCCTGTTTTTCTCACCCTCCAAAGCTGAGGTGGCTAAGGGAGGCAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp CCTAAGTGGAGTGGCCTCCTCTGCACTTGTCTCACTTaGAGTCCAGGATGTCTCCCTTCTAGCTCATCACAC +
Preference number: 3 (lower is better)
Translates to: PKWSGLLCTCLT*SPGCLPSSSSH
Trigger: GTGTGATGAGCTAGAAGGGAGACATCCTGGACTTCAAGTGAGACAAGTGCAGAGGAGGCCACTCCACTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAATGGCCTCCTCTGCACTaGTCTCACTTGAAGTCCAGG +
Preference number: 3 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKWPPLH*SHLKSR
Trigger: CCTGGACTTCAAGTGAGACAAGTGCAGAGGAGGCCA...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp AGTAGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGCGAGAGTTCAAAAGGGAGAGTTaGGCCAGGGATGGGCAGCAA +
Preference number: 3 (lower is better)
Translates to: SRSHSNRGQKEGTHLWREFKRES*ARDGQQ
Trigger: TTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAA...CTCTCGCCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR-3UTR CAA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCGTTACAAAAGCCATTTaGAGTAAGAAAGCATTCCGG +
Preference number: 3 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVAVTKAI*SKKAFR
Trigger: CCGGAATGCTTTCTTACTCAAAATGGCTTTTGTAAC...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTTAAAAATCTCTGTTTaGCCCATTAGTCCCGTAAGT +
Preference number: 3 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPLKISV*PISPVS
Trigger: ACTTACGGGACTAATGGGCAAAACAGAGATTTTTAA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGTTAGCCACCTCAGCTTaGGAGGGTGAGAAAAACAGG +
Preference number: 3 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRLATSA*EGEKNR
Trigger: CCTGTTTTTCTCACCCTCCAAAGCTGAGGTGGCTAA...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAACTGCACTTGTCTCACTaGAAGTCCAGGATGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PLDINLGLHPTGLHCLRELHLSH*KSRMSP
Trigger: GGGAGACATCCTGGACTTCAAGTGAGACAAGTGCAG...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp TGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGTCCTCCTCAGAGAATGGCAAGAGCATGTTaGGCTTTTCACTGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: WATHCLYSTSPTRCPPQRMARAC*AFHWAV
Trigger: AACTGCCCAGTGAAAAGCCAAACATGCTCTTGCCAT...TCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR TCA 72 bp AGGAGGGGAGGAATTAGAACTGAGTCAGTGATGCCATaGGGGAATGACCGTCCTGTCAGGAACATGAGTCTT +
Preference number: 3 (lower is better)
Translates to: RRGGIRTESVMP*GNDRPVRNMSL
Trigger: AAGACTCATGTTCCTGACAGGACGGTCATTCCCTCATGGCATCACTGACTCAGTTCTAATTCCTCCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp GGTTCCACCACAGGTGGCTTGGCTGAGGTCCAGATTTaGACAAATCAGATTCATAGCACACAATATCCAGCC +
Preference number: 3 (lower is better)
Translates to: GSTTGGLAEVQI*TNQIHSTQYPA
Trigger: GGCTGGATATTGTGTGCTATGAATCTGATTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAACAGAACCATTGGGTTaGCTGATTCTAGAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQTEPLG*LILEKG
Trigger: GCCCTTCTCTAGAATCAGCAAACCCAATGGTTCTGT...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp AATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGTaGTGCCATGAGGGAATGACCGTCCTGTCAGGAACA +
Preference number: 3 (lower is better)
Translates to: NETGGEELELSQ*CHEGMTVLSGT
Trigger: TGTTCCTGACAGGACGGTCATTCCCTCATGGCATCACTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp AACAGCTGGGTTCATGCGCCCAATTCGGACCCAATGTaGTTAAGTGAAACACGTGCTCATGCAGGTCTAAAA +
Preference number: 3 (lower is better)
Translates to: NSWVHAPNSDPM*LSETRAHAGLK
Trigger: TTTTAGACCTGCATGAGCACGTGTTTCACTTAAGCACATTGGGTCCGAATTGGGCGCATGAACCCAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp GGGATACAGATTTGTGTGTGTACATGTGTGTGCACGTaGACGTGCACACACACACACAAACACACAAGAAAG +
Preference number: 3 (lower is better)
Translates to: GIQICVCTCVCT*TCTHTHKHTRK
Trigger: CTTTCTTGTGTGTTTGTGTGTGTGTGTGCACGTGCACGTGCACACACATGTACACACACAAATCTGTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CCAATAGTTACAAGAAATTTGTTCATGACCTTGACTTaGAAGGTTCCACCACAGGTGGCTTGGCTGAGGTCC +
Preference number: 3 (lower is better)
Translates to: PIVTRNLFMTLT*KVPPQVAWLRS
Trigger: GGACCTCAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAACAAATTTCTTGTAACTATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp CACTGGATGGCTGCTGAAGTGGGCCATGGTTTTCCTTaGATAGGTCTGACTTCTAACAAACTTCAGGAAAAG +
Preference number: 3 (lower is better)
Translates to: HWMAAEVGHGFP*IGLTSNKLQEK
Trigger: CTTTTCCTGAAGTTTGTTAGAAGTCAGACCTATGCAAGGAAAACCATGGCCCACTTCAGCAGCCATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CCA 72 bp ATGACCTTGACTTGCAAGGTTCCACCACAGGTGGCTTaGCTGAGGTCCAGATTTGGACAAATCAGATTCATA +
Preference number: 3 (lower is better)
Translates to: MTLTCKVPPQVA*LRSRFGQIRFI
Trigger: TATGAATCTGATTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTCAAGGTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR TCA 72 bp ACTGGGAAGTGGGCAAAGCCTTCAGATGAGACCATCTaGGATCTATATAACCCAGGGTTTGTTTCACAGCTT +
Preference number: 3 (lower is better)
Translates to: TGKWAKPSDETI*DLYNPGFVSQL
Trigger: AAGCTGTGAAACAAACCCTGGGTTATATAGATCTCAGATGGTCTCATCTGAAGGCTTTGCCCACTTCCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR-3UTR CAA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGCATTCCGGTTCCAACTaGGTCAACGAGTCACTTTTA +
Preference number: 3 (lower is better)
Translates to: TGCSNQNETGGEELELSQHSGSN*VNESLL
Trigger: TAAAAGTGACTCGTTGACCAAGTTGGAACCGGAATG...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR GCA 72 bp GTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTGACATGTCTTGAA +
Preference number: 3 (lower is better)
Translates to: VSKNHILHGRLS*FGSLKRLTCLE
Trigger: TTCAAGACATGTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
3UTR-3UTR CAA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGTCCTTCCTTGCATATTaGGTCAGTGTTTGTAGTGCA +
Preference number: 3 (lower is better)
Translates to: TGCSNQNETGGEELELSQSFLAY*VSVCSA
Trigger: TGCACTACAAACACTGACCAAATATGCAAGGAAGGA...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp ATGGCACCTGATGCTGCGGCTCTGCCCAGGGACCTCCTTCCAGCCCCGCAGCCTCCAGGATGTGGCACATaGGCCAAGAGGCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MAPDAAALPRDLLPAPQPPGCGT*AKRQLR
Trigger: CCTCAGCTGCCTCTTGGCCCATGTGCCACATCCTGG...AGGCTGCGGGGCTGGAAGGAGGTCCCTGGGCAGAGCCGCAGCATCAGGTGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR TCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTGGCCACCAGCACGGCTaGGGGGCCACAGACCCTCCT +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGGHQHG*GATDPP
Trigger: AGGAGGGTCTGTGGCCCCTCAGCCGTGCTGGTGGCC...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTTTCCCGGCGGGGCCCTaGATGACAGGCCTCGCGGGA +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGFPAGP*MTGLAG
Trigger: TCCCGCGAGGCCTGTCATGCAGGGCCCCGCCGGGAA...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCACCTCCAGCCGCCAGTaGCCCCCTCGGGCGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCTSSRQ*PPRALA
Trigger: AGCCAGCGCCCGAGGGGGCCACTGGCGGCTGGAGGT...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCCTGCGGGATGACCTCTaGACACCAGCGGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCLRDDL*TPAAGG
Trigger: CCCGCCAGCCGCTGGTGTGCAGAGGTCATCCCGCAG...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCCTGCCAGCTGGGCGCTaGTCCCTCCAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVALPAGR*SLQGSE
Trigger: CTCAGAACCCTGGAGGGAGCAGCGCCCAGCTGGCAG...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCCACCTTGCCACTCGGTaGTCGGACACGGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCHLATR*SDTGQG
Trigger: GCCCTGCCCCGTGTCCGACCACCGAGTGGCAAGGTG...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 72 bp GCCACCAGCACGGCTGAGGGGCCACAGACCCTCCTCTaGCATGTGTGCAAGCTGAGTGGACCAAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ATSTAEGPQTLL*HVCKLSGPRSH
Trigger: GTGGCTTCTTGGTCCACTCAGCTTGCACACATGCAAGAGGAGGGTCTGTGGCCCCTCAGCCGTGCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCGGCCTGTGGCCATGCTaGGGAGTAGTGACCATTCCC +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPGLWPC*GVVTIP
Trigger: GGGAATGGTCACTACTCCTCAGCATGGCCACAGGCC...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TGGCACCTGATGCTGCGGCTCTGCCCAGGGACCTCCTTCCAGCCCCGCAGCCTCTCAGGGACAAGGATGTaGGCTACTCACTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: WHLMLRLCPGTSFQPRSLSGTRM*ATHCLY
Trigger: GTATAAGCAGTGAGTAGCCCACATCCTTGTCCCTGA...GAGGCTGCGGGGCTGGAAGGAGGTCCCTGGGCAGAGCCGCAGCATCAGGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR TCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCAACGATGCTGCGGGATaGCCTCTGCACACCAGCGGC +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPNDAAG*PLHTSG
Trigger: GCCGCTGGTGTGCAGAGGTCATCCCGCAGCATCGTT...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TTTGGCCAGGGATGGGCAGCAAGACCCATGAAGCACCGTGACCCAGATGTCAGGGGGCAGCAAGACCCATaGAGCACCGTGACCCAGATG +
Preference number: 4 (lower is better)
Translates to: FGQGWAARPMKHRDPDVRGQQDP*STVTQM
Trigger: CATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCC...CCTGACATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCCATCCCTGGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR GCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCCGCAGGGACTCCCACTaGTGCCACTCTACCAGGACG +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCRRDSH*CHSTRT
Trigger: CGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCTGCG...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTCCGGTAGCGGACCTTaGTCCCATTCCTCGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPSGSGP*SHSSSP
Trigger: AGGACTCGAGGAATGGGAGCAAGGTCCGCTACCGGA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCAGCTGCTCTGGCCAGTaGGAAGCTCCTTGCACTGCC +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVASCSGQ*EAPCTA
Trigger: GGCAGTGCAAGGAGCTTCCCACTGGCCAGAGCAGCT...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CAGGGATGGGCAGCAAGACCCATGAAGCACCGTGACCCAGATGTCAGGGCTTCCACACCATGCGTCACCTaGATCTGGTCTCAACCGCCG +
Preference number: 4 (lower is better)
Translates to: QGWAARPMKHRDPDVRASTPCVT*IWSQPP
Trigger: CGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGT...GGAAGCCCTGACATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCCATCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCTGCCATGTGGCCAGGTaGAGAGCTGCACCTCGTAAG +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVACHVAR*RAAPRK
Trigger: CTTACGAGGTGCAGCTCTTCACCTGGCCACATGGCA...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCAAGATGCCGAAGCTGTaGATGAGCGCGCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCKMPKL*MSAPLS
Trigger: CGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTT...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGGGCTGAGAAGGCCTaGCTGATGCTCGCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GLEAPCPACGLESELSHPWAEKA*LMLAFK
Trigger: CTTGAAGGCGAGCATCAGGCAGGCCTTCTCAGCCCA...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCAGCACCCCCACTGGATaGCTGCTGAAGTGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPSTPTG*LLKWAM
Trigger: CATGGCCCACTTCAGCAGCCATCCAGTGGGGGTGCT...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CATCTGTGGCGAGAGGCTTTCAAAAGGGAGAGTTTGGCCAGGGATGGGCAGCAATGCGTCACCTGGATCTaGTCTCAACCGCCGGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLWREAFKRESLARDGQQCVTWI*SQPPGL
Trigger: CAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCA...TTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAAAGCCTCTCGCCACAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAATGCCGAAGCTGTGCATaGGCGCGCCGCTCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKCRSCA*ARRSRS
Trigger: GCTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCA...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGCGAGAGGCTGCACCCCCACGTAGATaGGCAGCATGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: RSHSNRGQKEGTHLWREAAPPRR*AACPQW
Trigger: CCACTGTGGGCATGCTGCTCATCTACGTGGGGGTGC...AGCCTCTCGCCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCCCACTGGATGGCTGCTaGAGTGGGCCATGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCPLDGC*SGPWFS
Trigger: GGAAAACCATGGCCCACTTCAGCAGCCATCCAGTGG...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTCGTGATTGGAGGCTCTaGAGACAGGCAGACTGCACA +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGRDWRL*RQADCT
Trigger: TGTGCAGTCTGCCTGTCTGCAGAGCCTCCAATCACG...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCCCCAGGAGCTCAAGGTaGTTGTGGCAAGTCAGACCA +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVAPRSSR*LWQVRP
Trigger: TGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGG...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTTGTAGTGCAACTGAATaGGGACCTCCAGCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGCSATE*GPPAAS
Trigger: ACTGGCGGCTGGAGGTCCCCATTCAGTTGCACTACA...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCACTCCTGGTGGAAGATaGGCTGAGAAGGCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESTPGGR*AEKACL
Trigger: CAGGCAGGCCTTCTCAGCCCATCTTCCACCAGGAGT...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTCTGCTCTCATGGGATaGTGCACCACGGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCSALMG*CTTEEP
Trigger: GGGCTCTTCCGTGGTGCACCATCCCATGAGAGCAGA...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTGCACCTTGGAGCAGGTaGAGAGGAAACTCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGAPWSR*RGNSSQ
Trigger: CTGGGATGAGTTTCCTCTCCACCTGCTCCAAGGTGC...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGTCCTCCTCAGAGAGGGTGCCCCTGCAGATaGCACCTGATGCTGCGGCTC +
Preference number: 4 (lower is better)
Translates to: WATHCLYSTSPTRCPPQRGCPCR*HLMLRL
Trigger: GAGCCGCAGCATCAGGTGCCATCTGCAGGGGCACCC...TCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR TCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCCTGTGGTTTAGAGAGTaGGCTCTCTCACCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESLWFRE*ALSPLP
Trigger: AGGCAGGGGTGAGAGAGCTCACTCTCTAAACCACAG...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCGATGCCATGAGGGAATaGCCGTCCTGTCAGGAACAT +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVADAMRE*PSCQEH
Trigger: ATGTTCCTGACAGGACGGTCATTCCCTCATGGCATC...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCTGCATGTGTGCAAGCTaGGTGGACCAAGAAGCCACC +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPCMCAS*VDQEAT
Trigger: GGTGGCTTCTTGGTCCACTCAGCTTGCACACATGCA...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCTGAAGCGTTTGACTTCCCGGCGGGGCCCTaGATGACAGGCCTCGCGGGA +
Preference number: 4 (lower is better)
Translates to: KPYPPRTSFMLWFSEAFDFPAGP*MTGLAG
Trigger: TCCCGCGAGGCCTGTCATGCAGGGCCCCGCCGGGAA...GTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR GCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCGAGGGTAAGGAACGATaGTGCGGGATGACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCEGKER*CGMTSA
Trigger: TGCAGAGGTCATCCCGCAGCATCGTTCCTTACCCTC...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCCACAGCCCTCTGATCTaGTCTCATGGGATGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESHSPLI*SHGMVH
Trigger: GTGCACCATCCCATGAGAGCAGATCAGAGGGCTGTG...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCCCGTCACCCCCAGCATaGGAATGTGTCATACGGGTA +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPPSPPA*ECVIRV
Trigger: TACCCGTATGACACATTCCCATGCTGGGGGTGACGG...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCCCACTAGAGAGCTGCTaGGGAAATACTGGCTACCAT +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPPLESC*GNTGYH
Trigger: ATGGTAGCCAGTATTTCCCCAGCAGCTCTCTAGTGG...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTGCAGGAGGCACTCCTaGGGATACAGATTTGTGTGT +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPCRRHS*GYRFVC
Trigger: ACACACAAATCTGTATCCCCAGGAGTGCCTCCTGCA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTTGTGTGCAAGCTGAGTaGACCAAGAAGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGCVQAE*TKKPPP
Trigger: TGGTGGTGGCTTCTTGGTCCACTCAGCTTGCACACA...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AGGGACAAGGATGTGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGGCAGGCCAGGCCTTGTaGGGGCCTTCCACTAGTTCC +
Preference number: 4 (lower is better)
Translates to: RDKDVGYSLLILYLPNTMAGQAL*GPSTSS
Trigger: GGAACTAGTGGAAGGCCCCCACAAGGCCTGGCCTGC...CATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACATCCTTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
3UTR CAA 72 bp TCTGAGCTTGACAAACCACCAAGCAGTGCCCCTACCTaGCTGTTTCCACAGCAGGGAAACGGCTGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SELDKPPSSAPT*LFPQQGNGWGQ
Trigger: CTGACCCCAGCCGTTTCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGCTTGGTGGTTTGTCAAGCTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAGCACCCCCACGTAGATaGGCAGCATGCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: PLDINLGLHPTGLHCLREAPPRR*AACPQW
Trigger: CCACTGTGGGCATGCTGCTCATCTACGTGGGGGTGC...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCTCGGGAGGAAGTCCTaGCCACAGCCCTCTGATCTG +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRLGRKS*PQPSDL
Trigger: CAGATCAGAGGGCTGTGGTCAGGACTTCCTCCCGAG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCGCACAAGTTAAAGCTTaGGGAAGGAGGCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPAQVKA*GRRPPA
Trigger: TGCTGGTGGCCTCCTTCCTCAAGCTTTAACTTGTGC...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: PLDINLGLHPTGLHCLRETPSSP*RKMPKL
Trigger: CAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGT...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTGGTAGCCCAAAGCGGTaGTTCTTTTTCTTCACAGGC +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGGSPKR*FFFFTG
Trigger: GCCTGTGAAGAAAAAGAAGCACCGCTTTGGGCTACC...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AGGGACAAGGATGTGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGTTCCAGGGGTGCCCCTaGAGATGGCACCTGATGCTG +
Preference number: 4 (lower is better)
Translates to: RDKDVGYSLLILYLPNTMFQGCP*RWHLML
Trigger: CAGCATCAGGTGCCATCTGCAGGGGCACCCCTGGAA...CATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACATCCTTGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCAGTCTGGGTTTTCAATaGGATTCAACAGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPSLGFQ*DSTGPP
Trigger: AGGTGGCCCTGTTGAATCCCATTGAAAACCCAGACT...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGCTGCACACCAGCGGCTaGCGGGGCCCTCCCGTCACC +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQLHTSG*RGPPVT
Trigger: GGTGACGGGAGGGCCCCGCCAGCCGCTGGTGTGCAG...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTCTGATCTGCTCTCATaGGATGGTGCACCACGGAAG +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCSDLLS*DGAPRK
Trigger: CTTCCGTGGTGCACCATCCCATGAGAGCAGATCAGA...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GGGCTTCCACATGGGAAAGAGTGGCCTGGTAATCAGAGTGCAGACACCATGCGTGAGTTTGGCCAGGGATaGGCAGCAAGACCCATGAAG +
Preference number: 4 (lower is better)
Translates to: GLPHGKEWPGNQSADTMREFGQG*AARPMK
Trigger: CTTCATGGGTCTTGCTGCCCATCCCTGGCCAAACTC...ACGCATGGTGTCTGCACTCTGATTACCAGGCCACTCTTTCCCATGTGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
3UTR CAA 72 bp CTTCCTGTTCCTAACCATCCGTGGCTGCCTCTGAGCTaGACAAACCACCAAGCAGTGCCCCTACCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPVPNHPWLPLS*TNHQAVPLPCC
Trigger: ACAGCAAGGTAGGGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 72 bp CCCTCCAGGGTTCTGAGGCAGCCTTTGGACATAAACTaGGGGCTGCACCCTACAGGCTTACACTGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: PSRVLRQPLDIN*GLHPTGLHCLR
Trigger: CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTGCCTCAGAACCCTGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCAAGGGTCCTCTTCAGTaGGATCTGCTAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPKGPLQ*DLLGIH
Trigger: ATGTATACCTAGCAGATCTCACTGAAGAGGACCCTT...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CAGGGATGGGCAGCAAGACCCATGAAGCACCGTGACCCAGATGTCAGGGCTTCCAAGGGTCCTCTTCAGTaGGATCTGCTAGGTATACAT +
Preference number: 4 (lower is better)
Translates to: QGWAARPMKHRDPDVRASKGPLQ*DLLGIH
Trigger: ATGTATACCTAGCAGATCTCACTGAAGAGGACCCTT...GGAAGCCCTGACATCTGGGTCACGGTGCTTCATGGGTCTTGCTGCCCATCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCATGAAGCTCCAATTGTaGGCTCCAGGAAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCMKLQL*APGRWK
Trigger: CTTCCACCTTCCTGGAGCTCACAATTGGAGCTTCAT...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTCACGGACGTCTTTCATaGTTTGGTTCTCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGHGRLS*FGSLKR
Trigger: ACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTG...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAAGGGACTCCCACTGCTaGCACTCTACCAGGACGCTG +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKRDSHC*HSTRTL
Trigger: CAGCGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCT...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TTCCTCAGTAGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGAGGGACTCCCACTGCTaGCACTCTACCAGGACGCTG +
Preference number: 4 (lower is better)
Translates to: FLSRSHSNRGQKEGTHLWRDSHC*HSTRTL
Trigger: CAGCGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCT...CCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCTACTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR GCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCACCCACGGTCTGTGTaGCTGTGCTTCCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRHPRSV*LCFLPP
Trigger: AGGTGGAAGGAAGCACAGGCACACAGACCGTGGGTG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCCTCCTCTTGCATGTGTaGAAGCTGAGTGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESLLLHV*KLSGPR
Trigger: TCTTGGTCCACTCAGCTTGCACACATGCAAGAGGAG...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGAGAGCTCATGGGCCCTaGGCAGAGCCTTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRRAHGP*AEPFLF
Trigger: GAACAGGAAAGGCTCTGCCCAGGGCCCATGAGCTCT...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGACAAGGCAGCTGCTCTaGCCAGTGGGAAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRTRQLL*PVGSSL
Trigger: CAAGGAGCTTCCCACTGGCCAGAGCAGCTGCCTTGT...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CTTGTTTGGAAGTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGTGCCGAAGCTGTGCATaGGCGCGCCGCTCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LVWKCLKTISSTDVFHALCRSCA*ARRSRS
Trigger: GCTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCA...CAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACACTTCCAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR TCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCGTATTAGGAGGACGATaGAGACGACAGACTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPVLGGR*RRQTFQ
Trigger: TTGAAAAGTCTGTCGTCTTCATCGTCCTCCTAATAC...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCGCCACCTTTTTCCACTaGAGTATTAGGAGGACGATG +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCATFFH*SIRRTM
Trigger: CATCGTCCTCCTAATACTTCAGTGGAAAAAGGTGGC...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTTAGAACTGAGTCAGTaGTGCCATGAGGGAATGACC +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCLELSQ*CHEGMT
Trigger: GGTCATTCCCTCATGGCATCACTGACTCAGTTCTAA...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATAGAGCCCCCAGTGACTaGAGGAGGCACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNRAPSD*RRHSWG
Trigger: TCCCCAGGAGTGCCTCCTGCAGTCACTGGGGGCTCT...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCGGCCATGGTTTTCCTTaGATAGGTCTGACTTCTAAC +
Preference number: 4 (lower is better)
Translates to: GLEAPCPACGLESELSHPGHGFP*IGLTSN
Trigger: GTTAGAAGTCAGACCTATGCAAGGAAAACCATGGCC...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TTATACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATCTGATGCTGCGGCTCTaGCCAGGGACCTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LYSTSPTRCPPQRRTCFNLMLRL*PGTSFQ
Trigger: CTGGAAGGAGGTCCCTGGGCAGAGCCGCAGCATCAG...ATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCCCTCACAACACTGTCTaGGACGACAACAAACAAACA +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVAPHNTV*DDNKQT
Trigger: TGTTTGTTTGTTGTCGTCCCAGACAGTGTTGTGAGG...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCCACACCTTAGCAGTGTaGCTTCCTGTTCCTAACCAT +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPHTLAV*LPVPNH
Trigger: ATGGTTAGGAACAGGAAGCCACACTGCTAAGGTGTG...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCTACCATAGCTGTGGATaGGAGGGAGCACAAAGTCAA +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESYHSCG*EGAQSQ
Trigger: TTGACTTTGTGCTCCCTCCCATCCACAGCTATGGTA...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCAGCTTTCATAGATTATaGCTCTCCTATCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCSFHRL*LSYPLP
Trigger: GGGCAGGGGATAGGAGAGCCATAATCTATGAAAGCT...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCACGAGAGGTGTCCTATaGTCAGACACCCTATTAGAC +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESTRGVL*SDTLLD
Trigger: GTCTAATAGGGTGTCTGACCATAGGACACCTCTCGT...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GGGCTTCCACATGGGAAAGAGTGGCCTGGTAATCAGAGTGCAGACACCATGCGTGAGGGAACACATCTGTaGCGAGAGGCTTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GLPHGKEWPGNQSADTMREGTHL*REAFKR
Trigger: CCTTTTGAAAGCCTCTCGCCACAGATGTGTTCCCTC...ACGCATGGTGTCTGCACTCTGATTACCAGGCCACTCTTTCCCATGTGGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCCTCAGCTTTGGAGGGTaGGAAAAACAGGATCACTTT +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCLSFGG*EKQDHF
Trigger: AAAGTGATCCTGTTTTTCTCACCCTCCAAAGCTGAG...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCGTCCTGTCAGGAACATaGGTCTTGGTCTTCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCVLSGT*VLVFLN
Trigger: ATTTAGGAAGACCAAGACTCATGTTCCTGACAGGAC...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAGAGTCAGTGATGCCATaGGGGAATGACCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQESVMP*GNDRPV
Trigger: GACAGGACGGTCATTCCCTCATGGCATCACTGACTC...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCTCAGATGAGACCATCTaGGATCTATATAACCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPSDETI*DLYNPG
Trigger: CCCTGGGTTATATAGATCTCAGATGGTCTCATCTGA...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCGGCAAAGCCTTCAGATaGGACCATCTGAGATCTATA +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESGKAFR*DHLRSI
Trigger: TATAGATCTCAGATGGTCTCATCTGAAGGCTTTGCC...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGACTGCAAGGGCAGAGTaGGCTGCCAGCTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQTARAE*AASWAL
Trigger: CAGCGCCCAGCTGGCAGCTCACTCTGCCCTTGCAGT...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp ACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTCTCCTCCCACTCCTGCCATaGGGCTTCGTAAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: TLPPQHDVLLRDGLALILLPLLP*GFVRFL
Trigger: AAGGAACCTTACGAAGCCTCATGGCAGGAGTGGGAG...GAGAATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR TCA 90 bp CGAAGAAGTGGAGATGGACATGGCAAGAGCATGTTTGGCTTTTCACTGGGCAGTGAGGACTGCCAGGCTTaGTCTGAGACAAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRSGDGHGKSMFGFSLGSEDCQA*SETSAD
Trigger: GTCAGCACTTGTCTCAGATCAAGCCTGGCAGTCCTC...ACTGCCCAGTGAAAAGCCAAACATGCTCTTGCCATGTCCATCTCCACTTCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR GCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAGGTAAGGAACGATGCTaGGGGATGACCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: PLDINLGLHPTGLHCLREGKERC*GMTSAH
Trigger: GTGTGCAGAGGTCATCCCGCAGCATCGTTCCTTACC...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCACACAGCTCCTTCCTTaGATATTTGGTCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVATQLLP*IFGQCL
Trigger: CAAACACTGACCAAATATGCAAGGAAGGAGCTGTGT...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGTCCTGTTCCACACTCTaGAGCTCCTGGATCTGCATC +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRSCSTL*SSWICI
Trigger: GATGCAGATCCAGGAGCTGCAGAGTGTGGAACAGGA...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAGGCCTAGAAGCACCTTaGCCTGCCTGTGGTTTAGAG +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQGLEAP*PACGLE
Trigger: CTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAGCAGTGCCCCTACCTTaGTGTTTCCACAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKAVPLP*CFHSRE
Trigger: TTCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGC...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAATGTAGTTACAGTCCCTaGTCCTCTCAGCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQCSYSP*SSQHPG
Trigger: GCCAGGGTGCTGAGAGGAGCAGGGACTGTAACTACA...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAACCCATGACTCCCTGTTaGCAGGGAGGGCACAAGTTA +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQPMTPC*QGGHKL
Trigger: TAACTTGTGCCCTCCCTGGCAACAGGGAGTCATGGG...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGAAGGGCAGAGTGAGCTaGCAGCTGGGCGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQKGRVS*QLGAAP
Trigger: GGGAGCAGCGCCCAGCTGGCAGCTCACTCTGCCCTT...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp ACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTCTCTTTTCACTGGGCAGTTaGTGGCTCCCACTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TLPPQHDVLLRDGLALILFSLGS*WLPLLP
Trigger: TGGCAGGAGTGGGAGCCAGCAACTGCCCAGTGAAAA...GAGAATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCGGCCAGCTTCAAGTCTaGGTTTTCAATGGGATTCAA +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCGQLQV*VFNGIQ
Trigger: TTGAATCCCATTGAAAACCCAGACTTGAAGCTGGCC...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATCAGCAGGGAAACGGCTaGGGTCAGCCCATTCCACAG +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNQQGNG*GQPIPQ
Trigger: CTGTGGAATGGGCTGACCCCAGCCGTTTCCCTGCTG...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATCTCCTCTCAGCACCCTaGCTCTGCACTCCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNLLSAP*LCTPGG
Trigger: TCCACCAGGAGTGCAGAGCCAGGGTGCTGAGAGGAG...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGAAACCCTCTGCTCACTaGGAAGTGGGCAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRKPSAH*EVGKAF
Trigger: GAAGGCTTTGCCCACTTCCCAGTGAGCAGAGGGTTT...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAGTGATGGATGCCATGTaGCCAGGTGAAGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQVMDAM*PGEELH
Trigger: GTGCAGCTCTTCACCTGGCCACATGGCATCCATCAC...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GAGACAAGTGCTGACATGAGGAATGCCCAGGATGTGGCACATGGGCCAAGAGGCAAGTGGAGATGGACATaGCAAGAGCATGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ETSADMRNAQDVAHGPRGKWRWT*QEHVWL
Trigger: AAGCCAAACATGCTCTTGCCATGTCCATCTCCACTT...GCCTCTTGGCCCATGTGCCACATCCTGGGCATTCCTCATGTCAGCACTTGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CCA 90 bp AGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGCGAGAGGCTCCACATGGGAAAGAGTaGCCTGGTAATCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: RSHSNRGQKEGTHLWREAPHGKE*PGNQSA
Trigger: TGCACTCTGATTACCAGGCCACTCTTTCCCATGTGG...AGCCTCTCGCCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGTGCACTTGTCTCACTTaGAGTCCAGGATGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRCTCLT*SPGCLP
Trigger: AGGGAGACATCCTGGACTTCAAGTGAGACAAGTGCA...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCCCAATGTGCTTAAGTaGAACACGTGCTCATGCAGG +
Preference number: 4 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRPNVLK*NTCSCR
Trigger: CCTGCATGAGCACGTGTTTCACTTAAGCACATTGGG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATCTGAGAAGGCCTGCCTaGTGCTCGCCTTCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNLRRPA*CSPSSP
Trigger: TGGACTTGAAGGCGAGCATCAGGCAGGCCTTCTCAG...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAACATTTCTCAACACGGTaGTGGATGCCATGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQHFSTR*WMPCGQ
Trigger: CTGGCCACATGGCATCCATCACCGTGTTGAGAAATG...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTCTTCCATTTGGATATaGCAGTTCTACCTCATTAGT +
Preference number: 4 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPSSIWI*QFYLIS
Trigger: ACTAATGAGGTAGAACTGTCATATCCAAATGGAAGA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCTTGTCAACAACCCTCTaGCAGCAAAAGGAAGTAACA +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESLSTTL*QQKEVT
Trigger: TGTTACTTCCTTTTGCTGTCAGAGGGTTGTTGACAA...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CTCAGTAGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGCGATGTGGCTTATTTCCCTaGGTCCCGCATTCTCATCAG +
Preference number: 4 (lower is better)
Translates to: LSRSHSNRGQKEGTHLWRCGLFP*VPHSHQ
Trigger: CTGATGAGAATGCGGGACTCAGGGAAATAAGCCACA...TCGCCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCTACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR GCA 90 bp TGGAAGTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCAAGATGCCGAAGCTGTaGATGAGCGCGCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: WKCLKTISSTDVFHALVLKMPKL*MSAPLS
Trigger: CGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTT...GAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACACTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAACAAACCACCAAGCAGTaGCCCTACCTTGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQQTTKQ*PYLAVS
Trigger: GGAAACAGCAAGGTAGGGGCACTGCTTGGTGGTTTG...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAAAAAAGGCCAGTGAACTaGAAGGGCAGAGTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLDINLGLHPTGLHCLREKRPVN*KGRVSC
Trigger: GCAGCTCACTCTGCCCTTGCAGTTCACTGGCCTTTT...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAACAGTGGGAAGCTCCTTaGACTGCCTATCTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQQWEAP*TAYLSL
Trigger: CAGGCTAAGATAGGCAGTGCAAGGAGCTTCCCACTG...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAATTCTACAAGGCAGCTaGTCTGGCCAGTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQILQGS*SGQWEA
Trigger: AGCTTCCCACTGGCCAGAGCAGCTGCCTTGTAGAAT...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAGTTCCTAACCATCCGTaGCTGCCTCTGAGCTTGACA +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQVPNHP*LPLSLT
Trigger: TGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCGCTGAGGTCCAGATTTaGACAAATCAGATTCATAGC +
Preference number: 4 (lower is better)
Translates to: LEAPCPACGLESELSHPCAEVQI*TNQIHS
Trigger: GCTATGAATCTGATTTGTCCAAATCTGGACCTCAGC...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAACATCTCATCATCCGCTaGGATCAGGATCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQHLIIR*DQDLRL
Trigger: GAGTCTGAGATCCTGATCTCAGCGGATGATGAGATG...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTTTACAAAAGCCATTTTaGGTAAGAAAGCATTCCGGT +
Preference number: 4 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGLQKPF*VRKHSG
Trigger: ACCGGAATGCTTTCTTACTCAAAATGGCTTTTGTAA...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAACCAGCCCACACCCCATaGAAGGCAAATAAACCCATT +
Preference number: 4 (lower is better)
Translates to: PLDINLGLHPTGLHCLREPAHTP*KANKPI
Trigger: AATGGGTTTATTTGCCTTTCATGGGGTGTGGGCTGG...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATACCCAGGCTCCACACTaGAGAGGGTCTCCATATTCG +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNTQAPH*RGSPYS
Trigger: CGAATATGGAGACCCTCTGCAGTGTGGAGCCTGGGT...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCCCTTCCTTGCATATTTaGTCAGTGTTTGTAGTGCAA +
Preference number: 4 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESPSLHI*SVFVVQ
Trigger: TTGCACTACAAACACTGACCAAATATGCAAGGAAGG...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATACACTCTGCAGCTCCTaGATCTGCATCCAGACCAGC +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNTLCSS*ICIQTS
Trigger: GCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGT...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAACCTGGTTTAACAGCTaGGTTCATGCGCCCAATTCG +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKTWFNS*VHAPNS
Trigger: CGAATTGGGCGCATGAACCCAGCTGTTAAACCAGGT...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATATTAAGCACCCCCACTaGATGGCTGCTGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNIKHPH*MAAEVG
Trigger: GCCCACTTCAGCAGCCATCCAGTGGGGGTGCTTAAT...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAGTTGATGAGGTACAGTaGACAAGGGTCCTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQVDEVQ*TRVLFS
Trigger: ACTGAAGAGGACCCTTGTTCACTGTACCTCATCAAC...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAACTTCCTAAATTCGACTaGGAATGGCCTGGTTCTAGC +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKLPKFD*EWPGSS
Trigger: GCTAGAACCAGGCCATTCTCAGTCGAATTTAGGAAG...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCTGAAGTTAGCATTAACGTGCTaGAGGCCACGACGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: VSKNHILHGRLSCFGSLKLALTC*RPRRRA
Trigger: TGCTCGGCGTCGTGGCCTTCAGCACGTTAATGCTAA...CTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR GCA 90 bp GTTTTGTTTGGGTTTAATTATTTCCTCAGTAGAAGTCACAGCAATAGGGGCCAACGCAGGGACTCCCACTaGTGCCACTCTACCAGGACG +
Preference number: 4 (lower is better)
Translates to: VLFGFNYFLSRSHSNRGQRRDSH*CHSTRT
Trigger: CGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCTGCG...TTGGCCCCTATTGCTGTGACTTCTACTGAGGAAATAATTAAACCCAAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR GCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGAGACTCCTCGTGGGATaGGGCCCTCCGGTAGCGGAC +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKRLLVG*GPPVAD
Trigger: GTCCGCTACCGGAGGGCCGCATCCCACGAGGAGTCT...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTCTCACTAGCGAAGAAGTGGGTAGCCCAAAGCGGTaGTTCTTTTTCTTCACAGGC +
Preference number: 4 (lower is better)
Translates to: HDVLLRDGLALILTSEEVGSPKR*FFFFTG
Trigger: GCCTGTGAAGAAAAAGAAGCACCGCTTTGGGCTACC...CACTTCTTCGCTAGTGAGAATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR GCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGTGCTTCCTTCCACCTTaGCACTCGGTGGTCGGACAC +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQCFLPP*HSVVGH
Trigger: GTGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCA...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGTCAGCACCCTGGCTCTaGACTCCTGGTGGAAGATGG +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQSAPWL*TPGGRW
Trigger: CCATCTTCCACCAGGAGTGCAGAGCCAGGGTGCTGA...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAATTCATGACCTTGACTTaGAAGGTTCCACCACAGGTG +
Preference number: 4 (lower is better)
Translates to: PLDINLGLHPTGLHCLREFMTLT*KVPPQV
Trigger: CACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAA...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp GTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCTGAAGCACACGTACAGTACATaGGCCCAAGTCAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: VSKNHILHGRLSCFGSLKHTYST*AQVSSG
Trigger: TCCGCTGCTGACTTGGGCGCATGTACTGTACGTGTG...CTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR GCA 90 bp ACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTCTCATGTGGGCTACTCACTaGTTATACTCTACCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLPPQHDVLLRDGLALILMWATH*LYSTSP
Trigger: TGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACAT...GAGAATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAACTTTAAACCGTGATTaGAGGCTCTGCAGACAGGCA +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKTLNRD*RLCRQA
Trigger: TGCCTGTCTGCAGAGCCTCCAATCACGGTTTAAAGT...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp ACTCTACCTCCCCAACACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTCTCGCGAAGAAGTGGAGATaGACATGGCAAGAGCATGTT +
Preference number: 4 (lower is better)
Translates to: TLPPQHDVLLRDGLALILAKKWR*TWQEHV
Trigger: AACATGCTCTTGCCATGTCCATCTCCACTTCTTCGC...GAGAATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTGTTGGGGAGGTAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CCA 90 bp GTGTTTTGTTTGGGTTTAATTATTTCCTCAGTAGAAGTCACAGCAATAGGGGCCACCGCCGGGGCTGTGTaGCTTATTTCCCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: VFCLGLIISSVEVTAIGATAGAV*LISLSP
Trigger: GGGACTCAGGGAAATAAGCCACACAGCCCCGGCGGT...GGCCCCTATTGCTGTGACTTCTACTGAGGAAATAATTAAACCCAAACAAAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR TCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGAGGGGACGATCAGCATaGCGATGGCCAGCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQRGRSA*RWPASS
Trigger: ACTTGAAGCTGGCCATCGTCATGCTGATCGTCCCCT...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATGACCACTTTAAACCGTaGTTGGAGGCTCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNDHFKP*LEALQT
Trigger: TGTCTGCAGAGCCTCCAATCACGGTTTAAAGTGGTC...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAAACAGGATCACTTTGTaGGGCACATGTTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQNRITL*GTCSPE
Trigger: TTCTGGAGAACATGTGCCTCACAAAGTGATCCTGTT...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAACTCTGCACTCTTAGCTaGAAGCGTGTGAAACTTCTA +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKLCTLS*KRVKLL
Trigger: TAGAAGTTTCACACGCTTGCAGCTAAGAGTGCAGAG...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp CACGATGTCCTCCTCAGAGACGGACTTGCTTTAATTCTCACTAGCGAAGAAGTGTCACTAGCGAAGAAGTaGAGATGGACATGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HDVLLRDGLALILTSEEVSLAKK*RWTWQE
Trigger: CTCTTGCCATGTCCATCTCCACTTCTTCGCTAGTGA...CACTTCTTCGCTAGTGAGAATTAAAGCAAGTCCGTCTCTGAGGAGGACATCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR TCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGCACAGGTGGCTTGGCTaGGGTCCAGATTTGGACAAA +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQHRWLG*GPDLDK
Trigger: TTTGTCCAAATCTGGACCTCAGCCAAGCCACCTGTG...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp AAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCTGAAGCGTTTGACCACGGACGTCTTTCATaGTTTGGTTCTCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: KPYPPRTSFMLWFSEAFDHGRLS*FGSLKR
Trigger: ACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTG...GTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR GCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAAATTCGGACCCAATGTaGTTAAGTGAAACACGTGCT +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQNSDPM*LSETRA
Trigger: AGCACGTGTTTCACTTAAGCACATTGGGTCCGAATT...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGGCTCTCATGGGATGGTaGACCACGGAAGAGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKALMGW*TTEEPP
Trigger: TGGGGGCTCTTCCGTGGTGCACCATCCCATGAGAGC...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAACGTCTTTCATGCTTTaGTTCTCTGAAGCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQTSFML*FSEAFE
Trigger: CTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGT...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGTGCAGCTCCTGGATCTaGATCCAGACCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKCSSWI*IQTSCS
Trigger: GGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCA...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGTGCAGCAGTGGGGGCTaGGAGGCCAAGACCACTTTA +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKCSSGG*EAKTTL
Trigger: TAAAGTGGTCTTGGCCTCCCAGCCCCCACTGCTGCA...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGCAGTCCCAGGGTACCTaGTTTAACAGCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TGCSNQNETGGEELELSQQSQGT*FNSWVH
Trigger: ATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTG...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATAAAACATCAAAGCGTTaGCAAAGAAGGGGACGATCA +
Preference number: 4 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNKTSKR*QRRGRS
Trigger: TGATCGTCCCCTTCTTTGTCAACGCTTTGATGTTTT...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGGGTGACATTAACCCATaGCTCCCTGTTGCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKGDINP*LPVARE
Trigger: CTCCCTGGCAACAGGGAGTCATGGGTTAATGTCACC...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR GCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGGTTCCCCAAACCCTCTaGTCACTGGGAAGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKVPQTL*SLGSGQ
Trigger: TTGCCCACTTCCCAGTGAGCAGAGGGTTTGGGGAAC...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR TCA 90 bp GTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCTGAAGGCGTTTGACATGTCTTaGAAACACACACGTACAGTA +
Preference number: 4 (lower is better)
Translates to: VSKNHILHGRLSCFGSLKAFDMS*KHTRTV
Trigger: TACTGTACGTGTGTGTTTTCAAGACATGTCAAACGC...CTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR GCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGTCCCCACTAGAGAGCTaGTGGGGAAATACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKSPLES*WGNTGY
Trigger: GTAGCCAGTATTTCCCCAGCAGCTCTCTAGTGGGGA...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAATTCCTATGGCTTGTTTaGAAGTGTCTAAAAACCATA +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKFLWLV*KCLKTI
Trigger: TATGGTTTTTAGACACTTCCAAACAAGCCATAGGAA...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGTCCTCGAGTCCTGGTTaGCTCCCCTTTCTTCTAGCT +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKSSSPG*LPFLLA
Trigger: AGCTAGAAGAAAGGGGAGCCAACCAGGACTCGAGGA...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGCCATTCCTCGAGTCCTaGTTGGCTCCCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKPFLES*LAPLSS
Trigger: AGAAGAAAGGGGAGCCAACCAGGACTCGAGGAATGG...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAGCTAAGCTCCTTTCTTaGTCAAATTTAACTAAGATC +
Preference number: 4 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKAKLLS*SNLTKI
Trigger: GATCTTAGTTAAATTTGACCAAGAAAGGAGCTTAGC...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGAAGGAAGGTCCTAAGTaGAGTGGCCTCCTCTGCACT +
Preference number: 4 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKKEGPK*SGLLCT
Trigger: AGTGCAGAGGAGGCCACTCCACTTAGGACCTTCCTT...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
3UTR CAA 72 bp TTATTTCCAATAGTTACAAGAAATTTGTTCATGACCTaGACTTGCAAGGTTCCACCACAGGTGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LFPIVTRNLFMT*TCKVPPQVAWL
Trigger: CAGCCAAGCCACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAACAAATTTCTTGTAACTATTGGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CCA 90 bp TTGGAAGTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTGTCAGCAGCGGATTTTaGCTAAGTTGTCACAAATTA +
Preference number: 4 (lower is better)
Translates to: LEVSKNHILHGRLSCFGSVSSGF*LSCHKL
Trigger: TAATTTGTGACAACTTAGCCAAAATCCGCTGCTGAC...AGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACACTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR CCA 90 bp CTTTCATGCTTTGGTTCTCTGAAGCGTTTGACATGTCTTGAAAACACACACGTAACGTCTTTCATGCTTTaGTTCTCTGAAGCGTTTGAC +
Preference number: 4 (lower is better)
Translates to: LSCFGSLKRLTCLENTHVTSFML*FSEAFD
Trigger: GTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGT...TACGTGTGTGTTTTCAAGACATGTCAAACGCTTCAGAGAACCAAAGCATGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR CCA 90 bp GAAGTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATGCTTTGGTTCTCTGTTCCTATGGCTTGTTTaGAAGTGTCTAAAAACCATA +
Preference number: 4 (lower is better)
Translates to: EVSKNHILHGRLSCFGSLFLWLV*KCLKTI
Trigger: TATGGTTTTTAGACACTTCCAAACAAGCCATAGGAA...CAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS TCA 90 bp CCACGACGCCGAGCAGCCCCTGCAGGAAGATGCCGAAGCTGTGCATaGGCGCGCCGCTCTCGCAGCGGCCCGCCCCGGACGCGACTGTGG +
Preference number: 5 (lower is better)
Translates to: PRRRAAPAGRCRSCA*ARRSRSGPPRTRLW
Trigger: CCACAGTCGCGTCCGGGGCGGGCCGCTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000467979.1
CDS GCA 90 bp AAGGCCACGACGCCGAGCAGCCCCTGCAGGAAGATGCCGAAGCTGTaGATGAGCGCGCCGCTCTCGCAGCGGCCCGCCCCGGACGCGACT +
Preference number: 5 (lower is better)
Translates to: KATTPSSPCRKMPKL*MSAPLSQRPAPDAT
Trigger: AGTCGCGTCCGGGGCGGGCCGCTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000467979.1
CDS GCA 90 bp CGTTTGAGCATTAACGTGCTGAAGGCCACGACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAGCTGTGCATGAGCGCGCCGCTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: RLSINVLKATTPSSP*RKMPKLCMSAPLSQ
Trigger: CTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTTCAGCACGTTAATGCTCAAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS GCA 90 bp CAGACTCAGACTCCTCGTGGGATGCGGCCCTCCGGTAGCGGACCTTaGTCCCATTCCTCGAGTCCTGGTTGGCTCCCCTTTCTTCTAGCT +
Preference number: 5 (lower is better)
Translates to: QTQTPRGMRPSGSGP*SHSSSPGWLPFLLA
Trigger: AGCTAGAAGAAAGGGGAGCCAACCAGGACTCGAGGAATGGGAGCAAGGTCCGCTACCGGAGGGCCGCATCCCACGAGGAGTCTGAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000464769.1
CDS GCA 90 bp ATTATTAGCATTAACGTGCTGAAGGCCACGACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAGCTGTGCATGAGCGCGCCGCTCTCGCAG +
Preference number: 5 (lower is better)
Translates to: IISINVLKATTPSSP*RKMPKLCMSAPLSQ
Trigger: CTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTTCAGCACGTTAATGCTAATAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS-3UTR CAA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCCGGCCTAGAAGCACCTaGCCCTGCCTGTGGTTTAGA +
Preference number: 5 (lower is better)
Translates to: GLEAPCPACGLESELSHPRPRST*PCLWFR
Trigger: TCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCCG...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCAGCAGTGCCCCTACCTaGCTGTTTCCACAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: GLEAPCPACGLESELSHPSSAPT*LFPQQG
Trigger: TCCCTGCTGTGGAAACAGCAAGGTAGGGGCACTGCT...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTGGCTGCCTCTGAGCTaGACAAACCACCAAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPWLPLS*TNHQAV
Trigger: CACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp AGAGGCAGAGGGCAGTCCCAGGGTACCTGGTTTAACAGCTGGGTTCATGCGCCCTGGCCTCCTCTGCACTaGTCTCACTTGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: RGRGQSQGTWFNSWVHAPWPPLH*SHLKSR
Trigger: CCTGGACTTCAAGTGAGACAAGTGCAGAGGAGGCCA...GGGCGCATGAACCCAGCTGTTAAACCAGGTACCCTGGGACTGCCCTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS GCA 90 bp TTCCACATGGGAAAGAGTGGCCTGGTAATCAGAGTGCAGACACCATaGGTCACCTGGATCTGGTCTCAACCGCCGGGGCTGTGTGGCTTA +
Preference number: 5 (lower is better)
Translates to: FHMGKSGLVIRVQTP*VTWIWSQPPGLCGL
Trigger: TAAGCCACACAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGTCTGCACTCTGATTACCAGGCCACTCTTTCCCATGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS CCA 90 bp CTGAGATCAGGATCGCCTGTACGAGCACATCCCAATGCCTCAGCCTaGATCACAGGGCATTGCCGATCTAGCTCAGCCTGTGCCTCACTT +
Preference number: 5 (lower is better)
Translates to: LRSGSPVRAHPNASA*ITGHCRSSSACASL
Trigger: AAGTGAGGCACAGGCTGAGCTAGATCGGCAATGCCCTGTGATCCAGGCTGAGGCATTGGGATGTGCTCGTACAGGCGATCCTGATCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477591.1
CDS CCA 90 bp GACACCATGCGTCACCTGGATCTGGTCTCAACCGCCGGGGCTGTGTaGCTTATTTCCCTGAGTCCCGCATTCTCATCAGCAAACTCTTGG +
Preference number: 5 (lower is better)
Translates to: DTMRHLDLVSTAGAV*LISLSPAFSSANSW
Trigger: CCAAGAGTTTGCTGATGAGAATGCGGGACTCAGGGAAATAAGCCACACAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR CAA 90 bp GTTCCTAACCATCCGTGGCTGCCTCTGAGCTTGACAAACCACCAAGCAGTGCCCCCAGCTGCTCCAAGCTaGGGTCTGACCTTCACAGAA +
Preference number: 5 (lower is better)
Translates to: VPNHPWLPLSLTNHQAVPPAAPS*GLTFTE
Trigger: TTCTGTGAAGGTCAGACCCAAGCTTGGAGCAGCTGG...GGGCACTGCTTGGTGGTTTGTCAAGCTCAGAGGCAGCCACGGATGGTTAGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCCCACAGACCCTCCTCTaGCATGTGTGCAAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LEAPCPACGLESELSHPCPQTLL*HVCKLS
Trigger: ACTCAGCTTGCACACATGCAAGAGGAGGGTCTGTGG...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS TCA 90 bp ATGTTTGGCTTTTCACTGGGCAGTTGCTGGCTCCCACTCCTGCCATaGGGCTTCGTAAGGTTCCTTCTCACTCTGGTCCGGGTAGCCCAA +
Preference number: 5 (lower is better)
Translates to: MFGFSLGSCWLPLLP*GFVRFLLTLVRVAQ
Trigger: TTGGGCTACCCGGACCAGAGTGAGAAGGAACCTTACGAAGCCTCATGGCAGGAGTGGGAGCCAGCAACTGCCCAGTGAAAAGCCAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CAA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTGCGTCCAGGAGGAAGTaGATGAGGTACAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGASRRK*MRYSEQ
Trigger: TTGTTCACTGTACCTCATCAACTTCCTCCTGGACGC...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCTTAGCCACCTCAGCTTaGGAGGGTGAGAAAAACAGG +
Preference number: 5 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVALATSA*EGEKNR
Trigger: CCTGTTTTTCTCACCCTCCAAAGCTGAGGTGGCTAA...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp GGCCTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCGTTCATGACCTTGACTaGCAAGGTTCCACCACAGGT +
Preference number: 5 (lower is better)
Translates to: GLEAPCPACGLESELSHPVHDLD*QGSTTG
Trigger: ACCTGTGGTGGAACCTTGCAAGTCAAGGTCATGAAC...GGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCGTTCTGAGGCAGCCTTaGGACATAAACTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESVLRQP*DINLGL
Trigger: CAGCCCCAAGTTTATGTCCAAAGGCTGCCTCAGAAC...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CTAGAAGCACCTTGCCCTGCCTGTGGTTTAGAGAGTGAGCTCTCTCACCCCTGCTCTTCAGCTACCTCTTaGTTCCCCAAACCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LEAPCPACGLESELSHPCSSATS*FPKPSA
Trigger: AGCAGAGGGTTTGGGGAACAAAGAGGTAGCTGAAGA...GCAGGGGTGAGAGAGCTCACTCTCTAAACCACAGGCAGGGCAAGGTGCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGACCCATGACTCCCTGTaGCCAGGGAGGGCACAAGTT +
Preference number: 5 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRTHDSL*PGRAQV
Trigger: AACTTGTGCCCTCCCTGGCAACAGGGAGTCATGGGT...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CAGCCCATTCCACAGTCACTCAGCAAACTCCCAAAACCACAGGGGCCTGTGGCCACCTTCACAGAACCATaGGGTTTGCTGATTCTAGAG +
Preference number: 5 (lower is better)
Translates to: QPIPQSLSKLPKPQGPVATFTEP*GLLILE
Trigger: CTCTAGAATCAGCAAACCCAATGGTTCTGTGAAGGT...GGCCACAGGCCCCTGTGGTTTTGGGAGTTTGCTGAGTGACTGTGGAATGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCCTTTGGACATAAACTaGGGGCTGCACCCTACAGGC +
Preference number: 5 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRPLDIN*GLHPTG
Trigger: GCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CTTCCACATGGGAAAGAGTGGCCTGGTAATCAGAGTGCAGACACCATGCGTCACTTCAAAAGGGAGAGTTaGGCCAGGGATGGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LPHGKEWPGNQSADTMRHFKRES*ARDGQQ
Trigger: TTGCTGCCCATCCCTGGCCAAACTCTCCCTTTTGAA...GTGACGCATGGTGTCTGCACTCTGATTACCAGGCCACTCTTTCCCATGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR CAA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGCTGCACTTGTCTCACTaGAAGTCCAGGATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRLHLSH*KSRMSP
Trigger: GGGAGACATCCTGGACTTCAAGTGAGACAAGTGCAG...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CCACACTCTGCAGCTCCTGGATCTGCATCCAGACCAGCTGCTCCAAGCTTGGGTAACCACCTCTTCCATTaGGATATGACAGTTCTACCT +
Preference number: 5 (lower is better)
Translates to: PHSAAPGSASRPAAPSLGNHLFH*DMTVLP
Trigger: AGGTAGAACTGTCATATCCAAATGGAAGAGGTGGTT...ACCCAAGCTTGGAGCAGCTGGTCTGGATGCAGATCCAGGAGCTGCAGAGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CCTGGTAATCAGAGTGCAGACACCATGCGTCACCTGGATCTGGTCTCAACCGCCCTCATCAGCAAACTCTaGGCCTTCTCTTCATATTCG +
Preference number: 5 (lower is better)
Translates to: PGNQSADTMRHLDLVSTALISKL*AFSSYS
Trigger: CGAATATGAAGAGAAGGCCAAGAGTTTGCTGATGAG...GGCGGTTGAGACCAGATCCAGGTGACGCATGGTGTCTGCACTCTGATTACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR CAA 90 bp AGTAGAAGTCACAGCAATAGGGGCCAAAAGGAGGGAACACATCTGTGGCGAGAGGCGTCCAGGAGGAAGTaGATGAGGTACAGTGAACAA +
Preference number: 5 (lower is better)
Translates to: SRSHSNRGQKEGTHLWREASRRK*MRYSEQ
Trigger: TTGTTCACTGTACCTCATCAACTTCCTCCTGGACGC...CTCTCGCCACAGATGTGTTCCCTCCTTTTGGCCCCTATTGCTGTGACTTCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS-3UTR CAA 90 bp GCTGGCTCCTCTTCCCTCTTTTTAAGTCACAGTAGTCTGGGGGCAGGCGAGAGCGTTACAAAAGCCATTTaGAGTAAGAAAGCATTCCGG +
Preference number: 5 (lower is better)
Translates to: AGSSSLFLSHSSLGAGESVTKAI*SKKAFR
Trigger: CCGGAATGCTTTCTTACTCAAAATGGCTTTTGTAAC...GCTCTCGCCTGCCCCCAGACTACTGTGACTTAAAAAGAGGGAAGAGGAGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp AGGGACAAGGATGTGGGCTACTCACTGCTTATACTCTACCTCCCCAACACGATGATGGCAAGAGCATGTTaGGCTTTTCACTGGGCAGTT +
Preference number: 5 (lower is better)
Translates to: RDKDVGYSLLILYLPNTMMARAC*AFHWAV
Trigger: AACTGCCCAGTGAAAAGCCAAACATGCTCTTGCCAT...CATCGTGTTGGGGAGGTAGAGTATAAGCAGTGAGTAGCCCACATCCTTGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482155.1
CDS-3UTR CAA 90 bp AACCCAGGAGCTCAAGGTGCTTGTGGCAAGTCAGACCATAAGTCCCTTACCAAAACAGAACCATTGGGTTaGCTGATTCTAGAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: NPGAQGACGKSDHKSLTKTEPLG*LILEKG
Trigger: GCCCTTCTCTAGAATCAGCAAACCCAATGGTTCTGT...TTTGGTAAGGGACTTATGGTCTGACTTGCCACAAGCACCTTGAGCTCCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAACAAAACATCAAAGCGTaGACAAAGAAGGGGACGATC +
Preference number: 5 (lower is better)
Translates to: PLDINLGLHPTGLHCLREQNIKA*TKKGTI
Trigger: GATCGTCCCCTTCTTTGTCAACGCTTTGATGTTTTG...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGTTCCTCGAGTCCTGGTaGGCTCCCCTTTCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: TGCSNQNETGGEELELSQFLESW*APLSSS
Trigger: GCTAGAAGAAAGGGGAGCCAACCAGGACTCGAGGAA...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAACATTCCGGTTCCAACTaGGTCAACGAGTCACTTTTA +
Preference number: 5 (lower is better)
Translates to: PLDINLGLHPTGLHCLREHSGSN*VNESLL
Trigger: TAAAAGTGACTCGTTGACCAAGTTGGAACCGGAATG...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGGAATCCTTCCTTGCATATTaGGTCAGTGTTTGTAGTGCA +
Preference number: 5 (lower is better)
Translates to: PLDINLGLHPTGLHCLRESFLAY*VSVCSA
Trigger: TGCACTACAAACACTGACCAAATATGCAAGGAAGGA...TTCCCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp TCTGGAAACAAAGACCTCTTAGCTAAGCTCCTTTCTTGGTCAAATTTAACTAAGGTGCTTCCTTCCACCTaGCCACTCGGTGGTCGGACA +
Preference number: 5 (lower is better)
Translates to: SGNKDLLAKLLSWSNLTKVLPST*PLGGRT
Trigger: TGTCCGACCACCGAGTGGCAAGGTGGAAGGAAGCAC...CTTAGTTAAATTTGACCAAGAAAGGAGCTTAGCTAAGAGGTCTTTGTTTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp TCCCCTGCCCTGTCTGGAAACATTAGGAGCTCAAGACTGAACATGAAGCTCCAAAATTTGTTCATGACCTaGACTTGCAAGGTTCCACCA +
Preference number: 5 (lower is better)
Translates to: SPALSGNIRSSRLNMKLQNLFMT*TCKVPP
Trigger: TGGTGGAACCTTGCAAGTCAAGGTCATGAACAAATT...TTGGAGCTTCATGTTCAGTCTTGAGCTCCTAATGTTTCCAGACAGGGCAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS GCA 90 bp TGTTTGGAAGTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTGAGCATTAACGTGCTGAAGGCC +
Preference number: 5 (lower is better)
Translates to: CLEVSKNHILHGRLS*FGSLKRLSINVLKA
Trigger: GGCCTTCAGCACGTTAATGCTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACACTTCCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp CAGCCTTTGGACATAAACTTGGGGCTGCACCCTACAGGCTTACACTGTCTAAGGTATATAACCCAGGGTTaGTTTCACAGCTTTCATAGA +
Preference number: 5 (lower is better)
Translates to: QPLDINLGLHPTGLHCLRYITQG*FHSFHR
Trigger: TCTATGAAAGCTGTGAAACAAACCCTGGGTTATATA...CCTTAGACAGTGTAAGCCTGTAGGGTGCAGCCCCAAGTTTATGTCCAAAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp ACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTAGAACTGAGTCAGATGACACCAGCAAAGTaGCCTCCTACTGTAGTTACA +
Preference number: 5 (lower is better)
Translates to: TGCSNQNETGGEELELSQMTPAK*PPTVVT
Trigger: TGTAACTACAGTAGGAGGCAACTTTGCTGGTGTCAT...CTGACTCAGTTCTAATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS CCA 90 bp CAAGGGTCCTCTTCAGTGAGATCTGCTAGGTATACATTTGCAAAGTaGATGAACAGCATTCCTATGGCTTGTTTGGAAGTGTCTAAAAAC +
Preference number: 5 (lower is better)
Translates to: QGSSSVRSARYTFAK*MNSIPMACLEVSKN
Trigger: GTTTTTAGACACTTCCAAACAAGCCATAGGAATGCTGTTCATCCACTTTGCAAATGTATACCTAGCAGATCTCACTGAAGAGGACCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000485356.1
CDS-3UTR CAA 90 bp AAACAGCTGCAGGCACAGGTTGTTCAAACCAAAATGAAACAGGAGGGGAGGAATTTAAAAATCTCTGTTTaGCCCATTAGTCCCGTAAGT +
Preference number: 5 (lower is better)
Translates to: KQLQAQVVQTKMKQEGRNLKISV*PISPVS
Trigger: ACTTACGGGACTAATGGGCAAAACAGAGATTTTTAA...ATTCCTCCCCTCCTGTTTCATTTTGGTTTGAACAACCTGTGCCTGCAGCTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS-3UTR CAA 90 bp GGACGTCTTTCATGCTTTGGTTCTCTGAAGCGTTTGACATGTCTTGAAAACACAAGTCAGCAGCGGATTTaGGCTAAGTTGTCACAAATT +
Preference number: 5 (lower is better)
Translates to: GRLSCFGSLKRLTCLENTSQQRI*AKLSQI
Trigger: AATTTGTGACAACTTAGCCAAAATCCGCTGCTGACT...TGTGTTTTCAAGACATGTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467979.1
CDS TCA 72 bp CGAGCAGCCCCTGCAGGAAGATGCCGAAGCTGTGCATaGGCGCGCCGCTCTCGCAGCGGCCCGCCCCGGACG +
Preference number: 6 (lower is better)
Translates to: RAAPAGRCRSCA*ARRSRSGPPRT
Trigger: CGTCCGGGGCGGGCCGCTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000467979.1
CDS GCA 72 bp ACGCCGAGCAGCCCCTGCAGGAAGATGCCGAAGCTGTaGATGAGCGCGCCGCTCTCGCAGCGGCCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: TPSSPCRKMPKL*MSAPLSQRPAP
Trigger: CGGGGCGGGCCGCTGCGAGAGCGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000467979.1
CDS CCA 72 bp CCAGCGGCTGGCGGGGCCCTCCCGTCACCCCCAGCATaGGAATGTGTCATACGGGTAGCCCAAAGCGGTGCT +
Preference number: 6 (lower is better)
Translates to: PAAGGALPSPPA*ECVIRVAQSGA
Trigger: AGCACCGCTTTGGGCTACCCGTATGACACATTCCCATGCTGGGGGTGACGGGAGGGCCCCGCCAGCCGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355083.11
ENST00000464769.1
ENST00000477591.1
CDS GCA 72 bp TCTCCATATTCGCCGAAGCGCAGGGACTCCCACTGCTaGCACTCTACCAGGACGCTGACGGCGCGCACCCCC +
Preference number: 6 (lower is better)
Translates to: SPYSPKRRDSHC*HSTRTLTARTP
Trigger: GGGGGTGCGCGCCGTCAGCGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCTGCGCTTCGGCGAATATGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS GCA 72 bp GGGTCTCCATATTCGCCGAAGCGCAGGGACTCCCACTaGTGCCACTCTACCAGGACGCTGACGGCGCGCACC +
Preference number: 6 (lower is better)
Translates to: GSPYSPKRRDSH*CHSTRTLTART
Trigger: GGTGCGCGCCGTCAGCGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCTGCGCTTCGGCGAATATGGAGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS GCA 72 bp TCTTCATATTCGCCGAAGCGCAGGGACTCCCACTGCTaGCACTCTACCAGGACGCTGACGGCGCGCACCCCC +
Preference number: 6 (lower is better)
Translates to: SSYSPKRRDSHC*HSTRTLTARTP
Trigger: GGGGGTGCGCGCCGTCAGCGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCTGCGCTTCGGCGAATATGAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS GCA 72 bp ATTAACGTGCTGAAGGCCACGACGCCGAGCAGCCCCTaGAGGAAGATGCCGAAGCTGTGCATGAGCGCGCCG +
Preference number: 6 (lower is better)
Translates to: INVLKATTPSSP*RKMPKLCMSAP
Trigger: CGGCGCGCTCATGCACAGCTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGTGGCCTTCAGCACGTTAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000467979.1
CDS GCA 72 bp ACTCCTCGTGGGATGCGGCCCTCCGGTAGCGGACCTTaGTCCCATTCCTCGAGTCCTGGTTGGCTCCCCTTT +
Preference number: 6 (lower is better)
Translates to: TPRGMRPSGSGP*SHSSSPGWLPF
Trigger: AAAGGGGAGCCAACCAGGACTCGAGGAATGGGAGCAAGGTCCGCTACCGGAGGGCCGCATCCCACGAGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000464769.1
CDS GCA 72 bp TTCTCTTCATATTCGCCGAAGCGCAGGGACTCCCACTaGTGCCACTCTACCAGGACGCTGACGGCGCGCACC +
Preference number: 6 (lower is better)
Translates to: FSSYSPKRRDSH*CHSTRTLTART
Trigger: GGTGCGCGCCGTCAGCGTCCTGGTAGAGTGGCAGCAGTGGGAGTCCCTGCGCTTCGGCGAATATGAAGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS CCA 72 bp GGCCTGGTAATCAGAGTGCAGACACCATGCGTCACCTaGATCTGGTCTCAACCGCCGGGGCTGTGTGGCTTA +
Preference number: 6 (lower is better)
Translates to: GLVIRVQTPCVT*IWSQPPGLCGL
Trigger: TAAGCCACACAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGTCTGCACTCTGATTACCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS CCA 72 bp GGATCGCCTGTACGAGCACATCCCAATGCCTCAGCCTaGATCACAGGGCATTGCCGATCTAGCTCAGCCTGT +
Preference number: 6 (lower is better)
Translates to: GSPVRAHPNASA*ITGHCRSSSAC
Trigger: ACAGGCTGAGCTAGATCGGCAATGCCCTGTGATCCAGGCTGAGGCATTGGGATGTGCTCGTACAGGCGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477591.1
CDS CCA 72 bp CGTCACCTGGATCTGGTCTCAACCGCCGGGGCTGTGTaGCTTATTTCCCTGAGTCCCGCATTCTCATCAGCA +
Preference number: 6 (lower is better)
Translates to: RHLDLVSTAGAV*LISLSPAFSSA
Trigger: TGCTGATGAGAATGCGGGACTCAGGGAAATAAGCCACACAGCCCCGGCGGTTGAGACCAGATCCAGGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS TCA 72 bp CTCCTCCACGTCGGACTCCTCCATCTCATCATCCGCTaGGATCAGGATCTCAGACTCAGACTCCTCGTGGGA +
Preference number: 6 (lower is better)
Translates to: LLHVGLLHLIIR*DQDLRLRLLVG
Trigger: TCCCACGAGGAGTCTGAGTCTGAGATCCTGATCTCAGCGGATGATGAGATGGAGGAGTCCGACGTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355083.11
ENST00000464769.1
CDS TCA 72 bp CTCCTCCACGTCGGACTCCTCCATCTCATCATCCGCTaGGATCAGGATCGCCTGTACGAGCACATCCCAATG +
Preference number: 6 (lower is better)
Translates to: LLHVGLLHLIIR*DQDRLYEHIPM
Trigger: CATTGGGATGTGCTCGTACAGGCGATCCTGATCTCAGCGGATGATGAGATGGAGGAGTCCGACGTGGAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477591.1
CDS GCA 72 bp GCACATCCCAATGCCTCAGCCTGGATCACAGGGCATTaGCGATCTAGCTCAGCCTGTGCCTCACTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: AHPNASAWITGH*RSSSACASLLV
Trigger: GACAAGAAGTGAGGCACAGGCTGAGCTAGATCGGCAATGCCCTGTGATCCAGGCTGAGGCATTGGGATGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477591.1
CDS CCA 72 bp GTAATCAGAGTGCAGACACCATGCGTCACCTGGATCTaGTCTCAACCGCCGGGGCTGTGTGGCTTATTTCCC +
Preference number: 6 (lower is better)
Translates to: VIRVQTPCVTWI*SQPPGLCGLFP
Trigger: GGGAAATAAGCCACACAGCCCCGGCGGTTGAGACCAGATCCAGGTGACGCATGGTGTCTGCACTCTGATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS CCA 72 bp GGGGACGATCAGCATGACGATGGCCAGCTTCAAGTCTaGGTTTTCAATGGGATTCAACAGGGCCACCTTTTT +
Preference number: 6 (lower is better)
Translates to: GDDQHDDGQLQV*VFNGIQQGHLF
Trigger: AAAAAGGTGGCCCTGTTGAATCCCATTGAAAACCCAGACTTGAAGCTGGCCATCGTCATGCTGATCGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355083.11
CDS CAA 72 bp TATTTCCCTGAGTCCCGCATTCTCATCAGCAAACTCTaGGCCTTCTCTTCATATTCGCCGAAGCGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: YFPESRILISKL*AFSSYSPKRRD
Trigger: GTCCCTGCGCTTCGGCGAATATGAAGAGAAGGCCAAGAGTTTGCTGATGAGAATGCGGGACTCAGGGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485356.1
CDS GCA 72 bp GTGTCTAAAAACCATATCCTCCACGGACGTCTTTCATaGTTTGGTTCTCTGAAGCGTTTGAGCATTAACGTG +
Preference number: 6 (lower is better)
Translates to: VSKNHILHGRLS*FGSLKRLSINV
Trigger: CACGTTAATGCTCAAACGCTTCAGAGAACCAAAGCATGAAAGACGTCCGTGGAGGATATGGTTTTTAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355083.11