RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STIM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000109689

Ensembl transcript IDs: ENST00000463501.5, ENST00000465503.6, ENST00000467011.6, ENST00000467087.7, ENST00000473519.5, ENST00000477474.3, ENST00000478049.1, ENST00000478425.1, ENST00000494628.6, ENST00000504511.1

Found 614 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTaGACTGGTTTACTGTCGTTGCCAGCTGAGGAACATGATGTGTGG +
Preference number: 1 (lower is better)
Translates to: RSCGMLLILATLGAS*TGLLSLPAEEHDVW
Trigger: CCACACATCATGTTCCTCAGCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR GCA 90 bp GAGCAGCAGTGGGCCTTGCTAACAGCTCCTCCCATCTTCACTCCGTaGTCCAGCAACTTTTCCCTTCTCTATTCATCCAACTGCAAAGTT +
Preference number: 1 (lower is better)
Translates to: EQQWALLTAPPIFTP*SSNFSLLYSSNCKV
Trigger: AACTTTGCAGTTGGATGAATAGAGAAGGGAAAAGTTGCTGGAGCACGGAGTGAAGATGGGAGGAGCTGTTAGCAAGGCCCACTGCTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR CCA 90 bp CATGATGTGTGGCGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTG +
Preference number: 1 (lower is better)
Translates to: HDVWRGLGTGMPLES*FMLQDFSKMPLYTL
Trigger: CAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCGCCACACATCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR TCA 90 bp ATAAATGAGTGTCTGAAATTGAGCACAAACAATGCACATGCTCCCTaGCTGAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTC +
Preference number: 1 (lower is better)
Translates to: INECLKLSTNNAHAP*LKTAHSLFGQPPPL
Trigger: GAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTCAGTCAGGGAGCATGTGCATTGTTTGTGCTCAATTTCAGACACTCATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR CCA 90 bp TTTTCTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCTaGCAACACTTGGGGCTTCCTGAACTGGTTTACTGTCGTTGCCAG +
Preference number: 1 (lower is better)
Translates to: FSLHYDKGHVGCCLF*QHLGLPELVYCRCQ
Trigger: CTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR GCA 90 bp GAATTGATTATATATAGTCACTTAAATAAGCAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCC +
Preference number: 1 (lower is better)
Translates to: ELIIYSHLNKQTVDS*PSGCSTMASGLESP
Trigger: GGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGCTTATTTAAGTGACTATATATAATCAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR TCA 90 bp ACGCACCGAGCCCAAGGTGAATACTGTTCACTCCATGAAAGGAAATaGTTGAGAAATGAAAGGGAGAGTCAAGGTAAAAAGTGGCAAAAG +
Preference number: 1 (lower is better)
Translates to: THRAQGEYCSLHERK*LRNERESQGKKWQK
Trigger: CTTTTGCCACTTTTTACCTTGACTCTCCCTTTCATTTCTCAATCATTTCCTTTCATGGAGTGAACAGTATTCACCTTGGGCTCGGTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR CCA 90 bp TCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTCCAATG +
Preference number: 1 (lower is better)
Translates to: SRDTSSLDIFRGDNV*YISRLKGGDCFLPM
Trigger: CATTGGAAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR CCA 90 bp AGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCA +
Preference number: 1 (lower is better)
Translates to: SPCWLTSPLKLVSPS*LSTKCCIYITENKA
Trigger: TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR GCA 90 bp AAGATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATaGTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTT +
Preference number: 1 (lower is better)
Translates to: KIRRCSGKQEIFASP*WLTSPLKLVSPSWL
Trigger: AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR CCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTTCA +
Preference number: 1 (lower is better)
Translates to: IRRCSGKQEIFASPC*LTSPLKLVSPSWLS
Trigger: TGAAAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR GCA 90 bp TTTCTATGTACTTTACTCACATATGTCTATGAAGATCGTCTTTACTaGACTACAAGCTCTCGAAAGGTACAAAATCCCCTAAATAACGAC +
Preference number: 1 (lower is better)
Translates to: FLCTLLTYVYEDRLY*TTSSRKVQNPLNND
Trigger: GTCGTTATTTAGGGGATTTTGTACCTTTCGAGAGCTTGTAGTGCAGTAAAGACGATCTTCATAGACATATGTGAGTAAAGTACATAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR CAA 90 bp GTCCTGCTCCAGAGCTCCCTTCTCACCCAGGAGCAGCAGTGGGCCTaGCTAACAGCTCCTCCCATCTTCACTCCGTGCTCCAGCAACTTT +
Preference number: 2 (lower is better)
Translates to: VLLQSSLLTQEQQWA*LTAPPIFTPCSSNF
Trigger: AAAGTTGCTGGAGCACGGAGTGAAGATGGGAGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGTGAGAAGGGAGCTCTGGAGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR-3UTR CCA 90 bp GGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCCTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 2 (lower is better)
Translates to: GEPQDTSTVTGESPREESLWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...GGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CCA 90 bp GAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTCTAAGCAGCAGTGCCCTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 2 (lower is better)
Translates to: ENSPQSLWPASSTLSSSALWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...GGCACTGCTGCTTAGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR-3UTR CCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 2 (lower is better)
Translates to: CPSGCSTMASGLESPNGVVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR TCA 90 bp CTCCAGAGCTCCCTTCTCACCCAGGAGCAGCAGTGGGCCTTGCTAACAGCTCCTGAAAACAAAACAACATaGTCTTTACAGCGGGACTTG +
Preference number: 2 (lower is better)
Translates to: LQSSLLTQEQQWALLTAPENKTT*SLQRDL
Trigger: CAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTC...AGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGTGAGAAGGGAGCTCTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR-3UTR CCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCTGGATGTTCCACTATaGCATCCGGCCTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDLDVPL*HPAWKA
Trigger: GGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTGAGGAACATGATGTGTaGCGAGGTTTAGGCACCGGG +
Preference number: 2 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLEEHDV*RGLGTG
Trigger: CCCGGTGCCTAAACCTCGCCACACATCATGTTCCTC...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR CAA 90 bp ATAACCCAGCAGCTGGAACTAGGCCAGGTCCTTGTCTCACTTGTCTaGGCAGCTCATGTTATAGGCAAATGCACCTCTCATAGCAAGGAC +
Preference number: 2 (lower is better)
Translates to: ITQQLELGQVLVSLV*AAHVIGKCTSHSKD
Trigger: GTCCTTGCTATGAGAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACCTGGCCTAGTTCCAGCTGCTGGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR GCA 90 bp CTCCAGAGCTCCCTTCTCACCCAGGAGCAGCAGTGGGCCTTGCTAACAGCTCCTAACATCCATCTGCATTaGAGTAACCAAATCACTTAT +
Preference number: 2 (lower is better)
Translates to: LQSSLLTQEQQWALLTAPNIHLH*SNQITY
Trigger: ATAAGTGATTTGGTTACTGCAATGCAGATGGATGTT...AGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGTGAGAAGGGAGCTCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR CAA 90 bp CAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTaGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTA +
Preference number: 2 (lower is better)
Translates to: QANPLGRNPLGTPHL*ISFAEIMFGISRGL
Trigger: TAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR CAA 90 bp CATTATGACAAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTaGGGGCTTCCTGAACTGGTTTACTGTCGTTGCCAGCTGAGGAAC +
Preference number: 2 (lower is better)
Translates to: HYDKGHVGCCLFWQH*GLPELVYCRCQLRN
Trigger: GTTCCTCAGCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR GCA 90 bp ACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCACAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 2 (lower is better)
Translates to: TGMPLESWFMLQDFSKMPQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...TGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 2 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR TCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTGCAGTAAATCACAGTaGAAGCCCTGGGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDCSKSQ*KPWGKQ
Trigger: TTGTTTTCCCCAGGGCTTTCACTGTGATTTACTGCA...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR GCA 90 bp GCTTTCAACCCTGTGTTCCTCAACCCTACCTCTCAGGTTATCTTATCATTAGTGCAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 2 (lower is better)
Translates to: AFNPVFLNPTSQVILSLVQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...CACTAATGATAAGATAACCTGAGAGGTAGGGTTGAGGAACACAGGGTTGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR-3UTR CCA 90 bp TCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 2 (lower is better)
Translates to: SFAEIMFGISRGLKEETVVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...AACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTCCTGGAAAGCCCCAATaGAGTTACATTCCTAAAATT +
Preference number: 2 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLPGKPQ*SYIPKI
Trigger: AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGG...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGC +
Preference number: 2 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLLVSPS*LSTKCC
Trigger: GCAACATTTTGTTGAAAGCCACGATGGACTTACAAG...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTTTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAG +
Preference number: 2 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIFASPC*LTSPLK
Trigger: CTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAA...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGCACCGGGATGCCACTaGAAAGCTGGTTCATGCTAC +
Preference number: 2 (lower is better)
Translates to: SPSWLSTKCCIYITENKAAPGCH*KAGSCY
Trigger: GTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTGGGGCTTCCTGAACTaGTTTACTGTCGTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQWGFLN*FTVVAS
Trigger: GCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCA...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTTATTCTGGCAACACTTaGGGCTTCCTGAACTGGTTT +
Preference number: 2 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIYSGNT*GFLNWF
Trigger: AAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATA...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR TCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCTTTACAGCGGGACTTaGAACTTCACAATAGTAAAT +
Preference number: 2 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDLYSGT*NFTIVN
Trigger: ATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR GCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCATTTTTGCAAGCCCATaGTGGCTTACGAGTCCATTA +
Preference number: 2 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIIFASP*WLTSPL
Trigger: TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAAT...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAACTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 2 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKLWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR GCA 90 bp GAACAGAATATATCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTAAAGGTCATGTGGGATaGTGCTTATTCTGGCAACAC +
Preference number: 2 (lower is better)
Translates to: EQNISLFPEAVQLPKSEAKGHVG*CLFWQH
Trigger: GTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT...AGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGATATATTCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR CCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 2 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp TCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGTTATAATGACAAAGGTCATGTaGGATGCTGCTTATTCTGGC +
Preference number: 2 (lower is better)
Translates to: SLFPEAVQLPKSEADSVIMTKVM*DAAYSG
Trigger: GCCAGAATAAGCAGCATCCCACATGACCTTTGTCAT...TATAACTGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR CAA 90 bp AGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTaGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCT +
Preference number: 2 (lower is better)
Translates to: SWFMLQDFSKMPLYT*LAGLKIILLVSVRP
Trigger: AGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR CAA 90 bp CCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCT +
Preference number: 2 (lower is better)
Translates to: PLESWFMLQDFSKMP*YTLLAGLKIILLVS
Trigger: AGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 2 (lower is better)
Translates to: LVSPSWLSTKCCIYITENQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR TCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAACATTGCTATTGAAATaGGAACTGAACGTTCCATCA +
Preference number: 2 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSTLLLK*ELNVPS
Trigger: TGATGGAACGTTCAGTTCTCATTTCAATAGCAATGT...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR GCA 90 bp GCTTTTTGCTTTTCTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCATTTTTGCAAGCCCATaGTGGCTTACGAGTCCATTA +
Preference number: 2 (lower is better)
Translates to: AFCFSLHYDKGHVGCCLFIFASP*WLTSPL
Trigger: TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAAT...GAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAAGCAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCACTTCACAATAGTAAATaGAGTTCAAGAAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSLHNSK*SSRSFP
Trigger: TGGGAAGCTTCTTGAACTGCATTTACTATTGTGAAG...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR GCA 90 bp GAAGATCGTCTTTACTGCACTACAAGCTCTCGAAAGGTACAAAATCCCCTAAATAAGTGTGTAAACAATTaGCTGAATCCCCATATCCCC +
Preference number: 2 (lower is better)
Translates to: EDRLYCTTSSRKVQNPLNKCVNN*LNPHIP
Trigger: GGGGATATGGGGATTCAGGCAATTGTTTACACACTT...ATTTAGGGGATTTTGTACCTTTCGAGAGCTTGTAGTGCAGTAAAGACGATCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR GCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGGTCATGTGGGATGCTaGTTATTCTGGCAACACTTG +
Preference number: 2 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRGHVGC*LFWQHL
Trigger: CAAGTGTTGCCAGAATAAGCAGCATCCCACATGACC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR GCA 90 bp TTACTACTTAGTCTCATTCACTTTTGCACGCACCGAGCCCAAGGTGAATACTGTGTTATGTGGCTTTGCTaGATTGTGTGTGAAATTCTA +
Preference number: 2 (lower is better)
Translates to: LLLSLIHFCTHRAQGEYCVMWLC*IVCEIL
Trigger: TAGAATTTCACACACAATGCAGCAAAGCCACATAAC...ACAGTATTCACCTTGGGCTCGGTGCGTGCAAAAGTGAATGAGACTAAGTAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR CCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGC +
Preference number: 2 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTLVSPS*LSTKCC
Trigger: GCAACATTTTGTTGAAAGCCACGATGGACTTACAAG...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CCA 90 bp ATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCCGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAA +
Preference number: 2 (lower is better)
Translates to: MPLYTLLAGLKIILLVSVRGDNV*YISRLK
Trigger: TTTAAGCCTCGAGATATACCAAACATTATCTCCGCG...GACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR-3UTR GCA 90 bp AGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCACTTAGAAAGTGTTGCTTCTTCTaGATAACTAATCTGACTTGG +
Preference number: 2 (lower is better)
Translates to: SLQMPLEHDSIKSASSLRKCCFF*ITNLTW
Trigger: CCAAGTCAGATTAGTTATGCAGAAGAAGCAACACTT...TCTAAGTGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR TCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCACTTTACAGCGGGACTTaGAACTTCACAATAGTAAAT +
Preference number: 2 (lower is better)
Translates to: SPSWLSTKCCIYITENKALYSGT*NFTIVN
Trigger: ATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAG...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR GCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGCTTCACAATAGTAAATaGAGTTCAAGAAGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: YIATKQQDSLHSSPENIVLHNSK*SSRSFP
Trigger: TGGGAAGCTTCTTGAACTGCATTTACTATTGTGAAG...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
3UTR-3UTR GCA 90 bp AACATCACTATTTCTTATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTTTTTATCATACAGCCTaGAATGCAGTAAATCACAGT +
Preference number: 2 (lower is better)
Translates to: NITISYIATKQQDSLHSSFYHTA*NAVNHS
Trigger: ACTGTGATTTACTGCATTGCAGGCTGTATGATAAAA...AGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATAAGAAATAGTGATGTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
3UTR CCA 72 bp GGTTTACTGTCGTTGCCAGCTGAGGAACATGATGTGTaGCGAGGTTTAGGCACCGGGATGCCACTGGAAAGC +
Preference number: 3 (lower is better)
Translates to: GLLSLPAEEHDV*RGLGTGMPLES
Trigger: GCTTTCCAGTGGCATCCCGGTGCCTAAACCTCGCCACACATCATGTTCCTCAGCTGGCAACGACAGTAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR TCA 72 bp GGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTaGACTGGTTTACTGTCGTTGCCAGCTGAGGAACAT +
Preference number: 3 (lower is better)
Translates to: GMLLILATLGAS*TGLLSLPAEEH
Trigger: ATGTTCCTCAGCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR CCA 72 bp TGGCGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTCTCCAAAATGCCATTG +
Preference number: 3 (lower is better)
Translates to: WRGLGTGMPLES*FMLQDFSKMPL
Trigger: CAATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR CCA 72 bp AAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTaGGGCTTCCTGAACTGGTTTACTGTCGTTGCCAGC +
Preference number: 3 (lower is better)
Translates to: KVMWDAAYSGNT*GFLNWFTVVAS
Trigger: GCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CAA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 3 (lower is better)
Translates to: SCPSGCSTMASGLESPNGVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR TCA 72 bp TGTCTGAAATTGAGCACAAACAATGCACATGCTCCCTaGCTGAAAACAGCCCACAGTCTCTTTGGCCAGCCT +
Preference number: 3 (lower is better)
Translates to: CLKLSTNNAHAP*LKTAHSLFGQP
Trigger: AGGCTGGCCAAAGAGACTGTGGGCTGTTTTCAGTCAGGGAGCATGTGCATTGTTTGTGCTCAATTTCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
3UTR-3UTR CAA 90 bp CCAGGTCCTTGTCTCACTTGTCTTGGCAGCTCATGTTATAGGCAAATGCACCTCTCTGCAAAGCCTTTTTaGGAATGGCTGTCCATTAAT +
Preference number: 3 (lower is better)
Translates to: PGPCLTCLGSSCYRQMHLSAKPF*EWLSIN
Trigger: ATTAATGGACAGCCATTCCAAAAAAGGCTTTGCAGA...GAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR GCA 72 bp TTTTCTCTCCATTATGACAAAGGTCATGTGGGATGCTaGTTATTCTGGCAACACTTGGGGCTTCCTGAACTG +
Preference number: 3 (lower is better)
Translates to: FSLHYDKGHVGC*LFWQHLGLPEL
Trigger: CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR GCA 72 bp TGCTTTTCTCTCCATTATGACAAAGGTCATGTGGGATaGTGCTTATTCTGGCAACACTTGGGGCTTCCTGAA +
Preference number: 3 (lower is better)
Translates to: CFSLHYDKGHVG*CLFWQHLGLPE
Trigger: TTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR CCA 72 bp CATTATGACAAAGGTCATGTGGGATGCTGCTTATTCTaGCAACACTTGGGGCTTCCTGAACTGGTTTACTGT +
Preference number: 3 (lower is better)
Translates to: HYDKGHVGCCLF*QHLGLPELVYC
Trigger: ACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR-3UTR CAA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGCAGACAGTAGACAGTaGCCCTTCTGGATGTTCCAC +
Preference number: 3 (lower is better)
Translates to: SPSWLSTKCCIYITENKAADSRQ*PFWMFH
Trigger: GTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CAA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAGGGACACCTCATCTCTaGATATCTTTCGCGGAGATA +
Preference number: 3 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPGTPHL*ISFAEI
Trigger: TATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCC...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR GCA 72 bp ATATATAGTCACTTAAATAAGCAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACTATGGCATCCGGCCTG +
Preference number: 3 (lower is better)
Translates to: IYSHLNKQTVDS*PSGCSTMASGL
Trigger: CAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGCTTATTTAAGTGACTATATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CAA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCGTAAACAAGAAATTTTaGCAAGCCCATGCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIVNKKF*QAHAGL
Trigger: TAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTAC...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR CCA 72 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCG +
Preference number: 3 (lower is better)
Translates to: CSGKQEIFASPC*LTSPLKLVSPS
Trigger: CGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR CCA 72 bp ACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTC +
Preference number: 3 (lower is better)
Translates to: TSSLDIFRGDNV*YISRLKGGDCF
Trigger: GAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR-3UTR CAA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 3 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CAA 90 bp GGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTGTAAACAAGAAATTTTaGCAAGCCCATGCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: GIIVYRCHLNMIPSSQPVVNKKF*QAHAGL
Trigger: TAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTAC...AACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR CCA 72 bp TGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGCATATACATCACTGAG +
Preference number: 3 (lower is better)
Translates to: WLTSPLKLVSPS*LSTKCCIYITE
Trigger: CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CAA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 3 (lower is better)
Translates to: LVSPSWLSTKCCIYITENVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR-3UTR CAA 90 bp GATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCAGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 3 (lower is better)
Translates to: DNSLQMPLEHDSIKSASSVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...TGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR GCA 72 bp ACTTTACTCACATATGTCTATGAAGATCGTCTTTACTaGACTACAAGCTCTCGAAAGGTACAAAATCCCCTA +
Preference number: 3 (lower is better)
Translates to: TLLTYVYEDRLY*TTSSRKVQNPL
Trigger: TAGGGGATTTTGTACCTTTCGAGAGCTTGTAGTGCAGTAAAGACGATCTTCATAGACATATGTGAGTAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR TCA 72 bp GGGAAAACAAAACAACATGATCTTTACAGCGGGACTTaGAACTTCACAATAGTAAATGCAGTTCAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GKTKQHDLYSGT*NFTIVNAVQEA
Trigger: AGCTTCTTGAACTGCATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR CCA 72 bp ATGTGTGAAAAGAATACTGATTTAAGTCAGGAGACTTaGGTTCCTAAGATGGTCCTACCATTAATCAGTTGT +
Preference number: 3 (lower is better)
Translates to: MCEKNTDLSQET*VPKMVLPLISC
Trigger: ACAACTGATTAATGGTAGGACCATCTTAGGAACCCAAGTCTCCTGACTTAAATCAGTATTCTTTTCACACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR-3UTR CAA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGATCTTTACAGCGGGACTaGAAACTTCACAATAGTAAA +
Preference number: 3 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRSLQRD*KLHNSK
Trigger: TTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGA...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CTCCAGAGCTCCCTTCTCACCCAGGAGCAGCAGTGGGCCTTGCTAACAGCTCCTCACCCGCGCTGCTGCTaGGGCGAGACCGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: LQSSLLTQEQQWALLTAPHPRCC*GETGIR
Trigger: GCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTG...AGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGTGAGAAGGGAGCTCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGCGCCGCCCGCGGAGGTaGCGGGGCACAAGCTCGCAT +
Preference number: 4 (lower is better)
Translates to: SRENPKTHPQLQANPLGRRRPRR*RGTSSH
Trigger: ATGCGAGCTTGTGCCCCGGCACCTCCGCGGGCGGCG...CCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR GCA 90 bp CAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGCACCCGCGCTGCTGCTaGGGCGAGACCGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: QLQANPLGRNPLGTPHLLHPRCC*GETGIR
Trigger: GCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTG...CAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR GCA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAAAGAGGAGGCGGCAGTTaGGGCAGAGCCAGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: SGEPQDTSTVTGESPREERGGGS*GRASRP
Trigger: CGGGCGACTGGCTCTGCCGCAACTGCCGCCTCCTCT...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR GCA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAAAAACCCGCTGCCTCCTaGCGGCTTCCCCCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: SGEPQDTSTVTGESPREEKPAAS*RLPPGA
Trigger: CGCACCTGGGGGAAGCCGGCAGGAGGCAGCGGGTTT...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp GACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGCGTCTTCAGGCGGTaGACGACACCCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DSCPSGCSTMASGLESPNGVFRR*TTPALL
Trigger: CAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGCC...ATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SRENPKTHPQLQANPLGRRTAQC*GVNGTG
Trigger: GCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCT...CCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
3UTR CAA 72 bp CAGAGCTCCCTTCTCACCCAGGAGCAGCAGTGGGCCTaGCTAACAGCTCCTCCCATCTTCACTCCGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QSSLLTQEQQWA*LTAPPIFTPCS
Trigger: GGAGCACGGAGTGAAGATGGGAGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGTGAGAAGGGAGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR TCA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTGTGTTGCGGGTGGTaGGGGTGCCGAGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SCPSGCSTMASGLESPNGVCCGW*GCRGCD
Trigger: GTCACACCCTCGGCACCCTCACCACCCGCAACACAC...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATGCACGACACCCGCGCTaGTGCTGCGGCGAGACCGGG +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDARHPR*CCGETG
Trigger: CCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGC...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTCGCCGCCCGCGGAGGTaGCGGGGCACAAGCTCGCAT +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLRRPRR*RGTSSH
Trigger: ATGCGAGCTTGTGCCCCGGCACCTCCGCGGGCGGCG...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: GEPQDTSTVTGESPREESRTAQC*GVNGTG
Trigger: GCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCT...GGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTCTAAGCAGCAGTGCCGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACA +
Preference number: 4 (lower is better)
Translates to: ENSPQSLWPASSTLSSSAARTAQ*CGVNGT
Trigger: TGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGC...GGCACTGCTGCTTAGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR CCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCAGCCAGCCCCACGCTaGGCCAGGAGTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDQPAPR*ARSRGG
Trigger: CCCGCCTCGACTCCTGGCCCAGCGTGGGGCTGGCTG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTCGACACCCGCGCTGCTaGTGCGGCGAGACCGGGATC +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLRHPRC*CGETGI
Trigger: GATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCG...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: SCPSGCSTMASGLESPNGRTAQC*GVNGTG
Trigger: GCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCT...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCCGAGGGTGTGACGGGTaGGGGGCGTGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ESPREESSRDTSSLDIFRRGCDG*GACGAS
Trigger: GCTTGCTCCACACGCCCCCCACCCGTCACACCCTCG...GCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp CTCCAGAGCTCCCTTCTCACCCAGGAGCAGCAGTGGGCCTTGCTAACAGCTCCTGCACCGGGATGCCACTaGAAAGCTGGTTCATGCTAC +
Preference number: 4 (lower is better)
Translates to: LQSSLLTQEQQWALLTAPAPGCH*KAGSCY
Trigger: GTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC...AGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGTGAGAAGGGAGCTCTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR TCA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTTGCAGGGATCTGTCATaGGCGCCGGGCTATCGCCGG +
Preference number: 4 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPCRDLS*APGYRR
Trigger: CCGGCGATAGCCCGGCGCTCATGACAGATCCCTGCA...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTCACCCGCGCTGCTGCTaGGGCGAGACCGGGATCCGC +
Preference number: 4 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIHPRCC*GETGIR
Trigger: GCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTG...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCGCACGACACCCGCGCTaGTGCTGCGGCGAGACCGGG +
Preference number: 4 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIARHPR*CCGETG
Trigger: CCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGC...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp CGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACA +
Preference number: 4 (lower is better)
Translates to: RGLGTGMPLESWFMLQDFARTAQ*CGVNGT
Trigger: TGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGC...GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGGAGACCGGGATCCGCTaGTCTGGCGCCGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: GTGMPLESWFMLQDFSKMETGIR*SGAAKH
Trigger: GTGTTTGGCGGCGCCAGAGCAGCGGATCCCGGTCTC...CATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR CCA 90 bp AGTCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGGCACCGGGATGCCACTaGAAAGCTGGTTCATGCTAC +
Preference number: 4 (lower is better)
Translates to: SRENPKTHPQLQANPLGRAPGCH*KAGSCY
Trigger: GTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC...CCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCCGACACCCGCGCTGCTaGTGCGGCGAGACCGGGATC +
Preference number: 4 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIRHPRC*CGETGI
Trigger: GATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCG...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCGCGAGTTCTCAAGCTaGTGGGTTCCGGGACGCCGC +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDREFSS*WVPGRR
Trigger: GCGGCGTCCCGGAACCCAGCAGCTTGAGAACTCGCG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAAGGAAGGCAAGGAGTGTaGTGTGTGTTGCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQGRQGV*CVLRVV
Trigger: CACCACCCGCAACACACACCACACTCCTTGCCTTCC...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAAACCCAGGAGCAGCAGTaGGCCTTGCTAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQTQEQQ*ALLTAP
Trigger: AGGAGCTGTTAGCAAGGCCCACTGCTGCTCCTGGGT...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR CCA 90 bp ACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCAGAGTTCTCAAGCTGCTaGGTTCCGGGACGCCGCGCG +
Preference number: 4 (lower is better)
Translates to: TGMPLESWFMLQDFSKMPEFSSC*VPGRRA
Trigger: CGCGCGGCGTCCCGGAACCCAGCAGCTTGAGAACTC...TGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR TCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGCGGCCTCCGGAGCTCTaGTCCCGGCTGCGTTCATTG +
Preference number: 4 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGRPPEL*SRLRSL
Trigger: CAATGAACGCAGCCGGGATCAGAGCTCCGGAGGCCG...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR TCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTACGAGGAGAAGCCGGGTaGAAGCGCAGCGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLRGEAG*KRSGAP
Trigger: CGGGGCGCCGCTGCGCTTTCACCCGGCTTCTCCTCG...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp ATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGCGAGGAGAAGCCGGGTaGAAGCGCAGCGGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: MLQDFSKMPLYTLLAGLKRGEAG*KRSGAP
Trigger: CGGGGCGCCGCTGCGCTTTCACCCGGCTTCTCCTCG...CTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR TCA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAACAGGCTGGGGAGTCCTaGGTTATGGGCTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: SGEPQDTSTVTGESPREEQAGES*VMGYLK
Trigger: TTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTG...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGGTGTGTTGCGGGTGGTaGGGGTGCCGAGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGVCCGW*GCRGCD
Trigger: GTCACACCCTCGGCACCCTCACCACCCGCAACACAC...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp GGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGGTGTGTTGCGGGTGGTaGGGGTGCCGAGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: GRNPLGTPHLLISFAEIMVCCGW*GCRGCD
Trigger: GTCACACCCTCGGCACCCTCACCACCCGCAACACAC...CATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCACGACACCCGCGCTGCTaGTGCGGCGAGACCGGGATC +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSRHPRC*CGETGI
Trigger: GATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCG...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTAGAGGAGGCGGCAGTTaGGGCAGAGCCAGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIRGGGS*GRASRP
Trigger: CGGGCGACTGGCTCTGCCGCAACTGCCGCCTCCTCT...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp CCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGAGCTGTGTGCAACGTaGAGAGTCCCAAAGACTGTG +
Preference number: 4 (lower is better)
Translates to: PQDTSTVTGESPREESSRELCAT*RVPKTV
Trigger: CACAGTCTTTGGGACTCTGCACGTTGCACACAGCTC...CCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACA +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLARTAQ*CGVNGT
Trigger: TGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGC...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTGGCTGTCTCCAACTaGACACTCCCTTGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRTPRHIHSYRRIPSGGILAVSN*TLPCVP
Trigger: TGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAG...GATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS-3UTR GCA 90 bp CCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATCCGGCTTCCCCCAGGTaGGCGAGTTCTCAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGCHWKAGSCYRISPKCHPASPR*ASSQAA
Trigger: AGCAGCTTGAGAACTCGCGCACCTGGGGGAAGCCGG...ATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp GTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTCAGCCAGCCCCACGCTaGGCCAGGAGTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: VHATGFLQNAIVHFACRTQPAPR*ARSRGG
Trigger: CCCGCCTCGACTCCTGGCCCAGCGTGGGGCTGGCTG...AGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR CCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTGCACCGGGATGCCACTaGAAAGCTGGTTCATGCTAC +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVAPGCH*KAGSCY
Trigger: GTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: GRTPRHIHSYRRIPSGGILWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...GATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp GCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCGCATGGTGGACTCAGTaGCATGCAGGGATCCGACTC +
Preference number: 4 (lower is better)
Translates to: APGCHWKAGSCYRISPKCAWWTQ*HAGIRL
Trigger: GAGTCGGATCCCTGCATGTCACTGAGTCCACCATGC...GCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR TCA 90 bp GCTTTCAACCCTGTGTTCCTCAACCCTACCTCTCAGGTTATCTTATCATTAGTGGGAGTCGAGGCGGGATaGAGGCGCCGAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AFNPVFLNPTSQVILSLVGVEAG*RRRGEA
Trigger: GGCTTCTCCTCGGCGCCTTCATCCCGCCTCGACTCC...CACTAATGATAAGATAACCTGAGAGGTAGGGTTGAGGAACACAGGGTTGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR TCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTCAGGCTGGGGAGTCCTaGGTTATGGGCTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVQAGES*VMGYLK
Trigger: TTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTG...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAAGAGCTGTGTGCAACGTaGAGAGTCCCAAAGACTGTG +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQELCAT*RVPKTV
Trigger: CACAGTCTTTGGGACTCTGCACGTTGCACACAGCTC...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGGAGCTGTGTGCAACGTaGAGAGTCCCAAAGACTGTG +
Preference number: 4 (lower is better)
Translates to: QLQANPLGRNPLGTPHLLELCAT*RVPKTV
Trigger: CACAGTCTTTGGGACTCTGCACGTTGCACACAGCTC...CAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCACGAGGGTGTGACGGGTaGGGGGCGTGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSRGCDG*GACGAS
Trigger: GCTTGCTCCACACGCCCCCCACCCGTCACACCCTCG...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGCGAGGGTGTGACGGGTaGGGGGCGTGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: ESSRDTSSLDIFRGDNVWRGCDG*GACGAS
Trigger: GCTTGCTCCACACGCCCCCCACCCGTCACACCCTCG...CCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp CCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: PQDTSTVTGESPREESSRVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...CCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp GAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTCTAAGCAGCAGTGCCGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: ENSPQSLWPASSTLSSSAVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...GGCACTGCTGCTTAGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR CCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAGTGCCGGCCCCCAGCTaGTCCTGCTCCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPVPAPS*SCSRAP
Trigger: GGGAGCTCTGGAGCAGGACCAGCTGGGGGCCGGCAC...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR TCA 90 bp AAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACAGCATGGTGGACTCAGTaGCATGCAGGGATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KTHPQLQANPLGRNPLGTAWWTQ*HAGICH
Trigger: ATGACAGATCCCTGCATGTCACTGAGTCCACCATGC...TGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR TCA 90 bp CGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCCAGGCTGGGGAGTCCTaGGTTATGGGCTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: RGLGTGMPLESWFMLQDFQAGES*VMGYLK
Trigger: TTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTG...GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp GAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTCTAAGCAGCAGTGCCGTTTTCCCTTCACTCTaGATGAACACTCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: ENSPQSLWPASSTLSSSAVFPSL*MNTPEP
Trigger: GGGTTCTGGAGTGTTCATTCAGAGTGAAGGGAAAAC...GGCACTGCTGCTTAGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR TCA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAAATGCACATGCTCCCTaGCTGAAAACAGCCCACAGT +
Preference number: 4 (lower is better)
Translates to: SCPSGCSTMASGLESPNGNAHAP*LKTAHS
Trigger: ACTGTGGGCTGTTTTCAGTCAGGGAGCATGTGCATT...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACGCACGACACCCGCGCTaGTGCTGCGGCGAGACCGGG +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENARHPR*CCGETG
Trigger: CCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGC...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGGGCGTCTTCAGGCGGTaGACGACACCCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RDTSSLDIFRGDNVWYISGVFRR*TTPALL
Trigger: CAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGCC...CGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCGCCGCCCGCGGAGGTaGCGGGGCACAAGCTCGCAT +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENRRPRR*RGTSSH
Trigger: ATGCGAGCTTGTGCCCCGGCACCTCCGCGGGCGGCG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGACCCATCTTCACTCCGTaGTCCAGCAACTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SCPSGCSTMASGLESPNGPIFTP*SSNFSL
Trigger: AAGGGAAAAGTTGCTGGAGCACGGAGTGAAGATGGG...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCCACTCTAAGCAGCAGTaGCGGCCCCCAGCTGGTCCT +
Preference number: 4 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIHSKQQ*RPPAGP
Trigger: AGGACCAGCTGGGGGCCGGCACTGCTGCTTAGAGTG...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR CCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCAGCCAGCCCCACGCTaGGCCAGGAGTCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENQPAPR*ARSRGG
Trigger: CCCGCCTCGACTCCTGGCCCAGCGTGGGGCTGGCTG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR CCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATGGGAAGAGGTCAGGCTaGGGAGTCCTGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDGKRSG*GVLSYG
Trigger: CCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCC...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGGTGGAATGGAGACTCTaGGCATCACCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GTGMPLESWFMLQDFSKMVEWRL*ASPPSC
Trigger: ACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCAC...CATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTTTGGATAGGGTGGAATaGAGACTCTGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVLDRVE*RLWASP
Trigger: TGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAA...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCACGAGGGTGTGACGGGTaGGGGGCGTGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPRGCDG*GACGAS
Trigger: GCTTGCTCCACACGCCCCCCACCCGTCACACCCTCG...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp ACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCAGGAAGGCAAGGAGTGTaGTGTGTGTTGCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TGMPLESWFMLQDFSKMPGRQGV*CVLRVV
Trigger: CACCACCCGCAACACACACCACACTCCTTGCCTTCC...TGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp CCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGAACTCTATCAACCACTaGAGAGTGTCTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PQDTSTVTGESPREESSRNSINH*RVSSRV
Trigger: GACCCTTGAAGACACTCTTCAGTGGTTGATAGAGTT...CCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp CCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGCTGGGAGATCATAAATaGAGGTTCGTGCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: PQDTSTVTGESPREESSRLGDHK*RFVHCY
Trigger: ATAGCAGTGCACGAACCTTCATTTATGATCTCCCAG...CCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGGGAGTCGAGGCGGGATaGAGGCGCCGAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQGVEAG*RRRGEA
Trigger: GGCTTCTCCTCGGCGCCTTCATCCCGCCTCGACTCC...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp GCTTTTTGCTTTTCTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCGGAGTCGAGGCGGGATaGAGGCGCCGAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AFCFSLHYDKGHVGCCLFGVEAG*RRRGEA
Trigger: GGCTTCTCCTCGGCGCCTTCATCCCGCCTCGACTCC...GAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAAGCAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR TCA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTGCATGGTGGACTCAGTaGCATGCAGGGATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPAWWTQ*HAGICH
Trigger: ATGACAGATCCCTGCATGTCACTGAGTCCACCATGC...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTGAACTGGGTCCCGGGAAATTGTaGCACTATTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KGHVGCCLFWQHLGLPELGPGKL*HYWGCV
Trigger: GACACACCCCCAATAGTGTCACAATTTCCCGGGACC...CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp TTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGCACAATGCTGCGGCGTaGACGGCACAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLAGLKIILLVSVRPTQSHNAAA*TAQAAA
Trigger: AGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTG...CGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTGTGAACGGCACAGGCTaGTGCTTCTGGCTAATGATC +
Preference number: 4 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPVNGTG*CFWLMI
Trigger: GATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCAC...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTCTGGTTTACTGTCGTTaGCAGCTGAGGAACATGATG +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVLVYCR*QLRNMM
Trigger: CATCATGTTCCTCAGCTGGCAACGACAGTAAACCAG...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCCGCTTCCAGAATTTTGTaGTCTACCTCATCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GEPQDTSTVTGESPREESASRIL*STSSRE
Trigger: CTCCCTAGATGAGGTAGACCACAAAATTCTGGAAGC...GGATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp CGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATTGGGAAGAGGTCAGGCTaGGGAGTCCTGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: RDATGKLVHATGFLQNAIGKRSG*GVLSYG
Trigger: CCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCC...AATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTGAACTGGTGGAATGGAGACTCTaGGCATCACCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KGHVGCCLFWQHLGLPELVEWRL*ASPPSC
Trigger: ACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCAC...CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp GGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCGAGGGTGTGACGGGTaGGGGGCGTGTGGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GIIVYRCHLNMIPSSQPVRGCDG*GACGAS
Trigger: GCTTGCTCCACACGCCCCCCACCCGTCACACCCTCG...AACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp CCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATCTGGATGTTCCACTATaGCATCCGGCCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PGCHWKAGSCYRISPKCHLDVPL*HPAWKA
Trigger: GGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAG...ATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCCGGGATCCGCTGCTCTaGCGCCGCCAAACACCAACC +
Preference number: 4 (lower is better)
Translates to: NFCKPMLAYESIKACKSIRDPLL*RRQTPT
Trigger: GGTTGGTGTTTGGCGGCGCCAGAGCAGCGGATCCCG...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR TCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAACTGGGAGATCATAAATaGAGGTTCGTGCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQLGDHK*RFVHCY
Trigger: ATAGCAGTGCACGAACCTTCATTTATGATCTCCCAG...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGCGGCCTCCGGAGCTCTaGTCCCGGCTGCGTTCATTG +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTRPPEL*SRLRSL
Trigger: CAATGAACGCAGCCGGGATCAGAGCTCCGGAGGCCG...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp CGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATTCCTGTTCTGCATACTaGCGTCTACTCAATTCACAT +
Preference number: 4 (lower is better)
Translates to: RENPKTHPQLQANPLGRNSCSAY*RLLNSH
Trigger: ATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGA...ATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp GACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGAGTTATGGGCTATCTaGAAGCCACAGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DSCPSGCSTMASGLESPNELWAI*KPQIFS
Trigger: TGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTC...ATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTCACAATGCTGCGGCGTaGACGGCACAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: VHATGFLQNAIVHFACRTHNAAA*TAQAAA
Trigger: AGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTG...AGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp TTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGCACAATGCTGCGGCGTaGACGGCACAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FMLQDFSKMPLYTLLAGLHNAAA*TAQAAA
Trigger: AGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTG...CAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp AGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCACTTAGAGTGTGTTGCGGGTGGTaGGGGTGCCGAGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SLQMPLEHDSIKSASSLRVCCGW*GCRGCD
Trigger: GTCACACCCTCGGCACCCTCACCACCCGCAACACAC...TCTAAGTGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGGTGTGTTGCGGGTGGTaGGGGTGCCGAGGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTVCCGW*GCRGCD
Trigger: GTCACACCCTCGGCACCCTCACCACCCGCAACACAC...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGATGCAGTAAATCACAGTaGAAGCCCTGGGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: SCPSGCSTMASGLESPNGCSKSQ*KPWGKQ
Trigger: TTGTTTTCCCCAGGGCTTTCACTGTGATTTACTGCA...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATTGCAGTAAATCACAGTaGAAGCCCTGGGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: DSCPSGCSTMASGLESPNCSKSQ*KPWGKQ
Trigger: TTGTTTTCCCCAGGGCTTTCACTGTGATTTACTGCA...ATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTCTAAGCAGCAGTGCCATAAATGAAGGTTCGTaGACTGCTATCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ENSPQSLWPASSTLSSSAINEGS*TAILGS
Trigger: ACTTCCCAGGATAGCAGTGCACGAACCTTCATTTAT...GGCACTGCTGCTTAGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAAGGCGTCTTCAGGCGGTaGACGACACCCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKGVFRR*TTPALL
Trigger: CAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGCC...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGAGAGGAGGCGGCAGTTaGGGCAGAGCCAGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: YIATKQQDSLHSSPENIVRGGGS*GRASRP
Trigger: CGGGCGACTGGCTCTGCCGCAACTGCCGCCTCCTCT...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPRTAQC*GVNGTG
Trigger: GCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCT...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTAAAGGTCATGTGGGATaGTGCTTATTCTGGCAACAC +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVKGHVG*CLFWQH
Trigger: GTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGATCAGGCAAACCCGCTaGCTCCTGCCGGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTIRQTR*LLPASP
Trigger: GGGGGAAGCCGGCAGGAGGCAGCGGGTTTGCCTGAT...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATTTCTGAAGTGCATCTaGAACAGACCAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGEPQDTSTVTGESPREEFLKCI*NRPTAS
Trigger: AGAAGCAGTTGGTCTGTTCCAGATGCACTTCAGAAA...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp GGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGGTGGAATGGAGACTCTaGGCATCACCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GRNPLGTPHLLISFAEIMVEWRL*ASPPSC
Trigger: ACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCAC...CATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAAATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQMPLES*FMLQDF
Trigger: GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCAT...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGCGGCCTCCGGAGCTCTaGTCCCGGCTGCGTTCATTG +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITERPPEL*SRLRSL
Trigger: CAATGAACGCAGCCGGGATCAGAGCTCCGGAGGCCG...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACTGCAGGGATCTGTCATaGGCGCCGGGCTATCGCCGG +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENCRDLS*APGYRR
Trigger: CCGGCGATAGCCCGGCGCTCATGACAGATCCCTGCA...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp TCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGATGCAGGGATCTGTCATaGGCGCCGGGCTATCGCCGG +
Preference number: 4 (lower is better)
Translates to: SLDIFRGDNVWYISRLKGCRDLS*APGYRR
Trigger: CCGGCGATAGCCCGGCGCTCATGACAGATCCCTGCA...TCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR TCA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGATCCTGTTCTGCATACTaGCGTCTACTCAATTCACAT +
Preference number: 4 (lower is better)
Translates to: SCPSGCSTMASGLESPNGSCSAY*RLLNSH
Trigger: ATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGA...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAGAACCCCAAGACGGTCCCGGGAAATTGTaGCACTATTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: KIILLVSVRPTQSGEPQDGPGKL*HYWGCV
Trigger: GACACACCCCCAATAGTGTCACAATTTCCCGGGACC...GTCTTGGGGTTCTCCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp CAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGGAAGCAGTTCAGATATaGGGAAATGATCAGACTCAG +
Preference number: 4 (lower is better)
Translates to: QLQANPLGRNPLGTPHLLEAVQI*GNDQTQ
Trigger: CTGAGTCTGATCATTTCCTCATATCTGAACTGCTTC...CAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAAATAAATGAAGGTTCGTaGACTGCTATCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQINEGS*TAILGS
Trigger: ACTTCCCAGGATAGCAGTGCACGAACCTTCATTTAT...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GGTCCTTGTCTCACTTGTCTTGGCAGCTCATGTTATAGGCAAATGCACCTCTCAAACGGCACAGGCTGCTaGTTCTGGCTAATGATCCAG +
Preference number: 4 (lower is better)
Translates to: GPCLTCLGSSCYRQMHLSNGTGC*FWLMIQ
Trigger: CTGGATCATTAGCCAGAAGCAGCAGCCTGTGCCGTT...TGAGAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp GGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGGTGAACGGCACAGGCTaGTGCTTCTGGCTAATGATC +
Preference number: 4 (lower is better)
Translates to: GRNPLGTPHLLISFAEIMVNGTG*CFWLMI
Trigger: GATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCAC...CATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp AATATATCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACA +
Preference number: 4 (lower is better)
Translates to: NISLFPEAVQLPKSEADSARTAQ*CGVNGT
Trigger: TGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGC...TGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGATATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp GCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCGGTCATGTGGGATGCTaGTTATTCTGGCAACACTTG +
Preference number: 4 (lower is better)
Translates to: APGCHWKAGSCYRISPKCGHVGC*LFWQHL
Trigger: CAAGTGTTGCCAGAATAAGCAGCATCCCACATGACC...GCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTTTTCTGAAGTGCATCTaGAACAGACCAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVFLKCI*NRPTAS
Trigger: AGAAGCAGTTGGTCTGTTCCAGATGCACTTCAGAAA...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGTTTCTGAAGTGCATCTaGAACAGACCAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QLQANPLGRNPLGTPHLLFLKCI*NRPTAS
Trigger: AGAAGCAGTTGGTCTGTTCCAGATGCACTTCAGAAA...CAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp TTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAAGGCAAGGAGTGTaGTGTGTGTTGCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLAGLKIILLVSVRPTQSGRQGV*CVLRVV
Trigger: CACCACCCGCAACACACACCACACTCCTTGCCTTCC...CGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp GTGGCGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGACGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: VARFRHRDATGKLVHATGRGDNV*YISRLK
Trigger: TTTAAGCCTCGAGATATACCAAACATTATCTCCGCG...TCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCGAGGAACATGATGTGTaGCGAGGTTTAGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIEEHDV*RGLGTG
Trigger: CCCGGTGCCTAAACCTCGCCACACATCATGTTCCTC...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTGAGGAACATGATGTGTaGCGAGGTTTAGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIEEHDV*RGLGTG
Trigger: CCCGGTGCCTAAACCTCGCCACACATCATGTTCCTC...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GGTCCTTGTCTCACTTGTCTTGGCAGCTCATGTTATAGGCAAATGCACCTCTCATGGGGCTTCCTGAACTaGTTTACTGTCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPCLTCLGSSCYRQMHLSWGFLN*FTVVAS
Trigger: GCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCA...TGAGAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR CAA 72 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTaGGGGCTTCCTGAACTGGTTTACTGTCGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KGHVGCCLFWQH*GLPELVYCRCQ
Trigger: CTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR CAA 72 bp CAGCTGGAACTAGGCCAGGTCCTTGTCTCACTTGTCTaGGCAGCTCATGTTATAGGCAAATGCACCTCTCAT +
Preference number: 4 (lower is better)
Translates to: QLELGQVLVSLV*AAHVIGKCTSH
Trigger: ATGAGAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACCTGGCCTAGTTCCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR TCA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTATTTTCACCAAATCATaGCTTCAAACACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: CPSGCSTMASGLESPNGVIFTKS*LQTPDG
Trigger: CCCATCAGGTGTTTGAAGTCATGATTTGGTGAAAAT...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTAGCTCTGATCCCGGCTaGGTTCATTGGTTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKISSDPG*VHWFRL
Trigger: TAACCGGAACCAATGAACGCAGCCGGGATCAGAGCT...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: YIATKQQDSLHSSPENIVRTAQC*GVNGTG
Trigger: GCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCT...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACA +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAARTAQ*CGVNGT
Trigger: TGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAAAGTCTCATTCACTTTTaGACGCACCGAGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: CSTMASGLESPNGVTFLKSLIHF*THRAQG
Trigger: ACCTTGGGCTCGGTGCGTGCAAAAGTGAATGAGACT...TTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp CGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATTAGTCTCATTCACTTTTaGACGCACCGAGCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: RDATGKLVHATGFLQNAISLIHF*THRAQG
Trigger: ACCTTGGGCTCGGTGCGTGCAAAAGTGAATGAGACT...AATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GTGGCGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGAAAGTGTTGCTTCTTCTaGATAACTAATCTGACTTGG +
Preference number: 4 (lower is better)
Translates to: VARFRHRDATGKLVHATGKCCFF*ITNLTW
Trigger: CCAAGTCAGATTAGTTATGCAGAAGAAGCAACACTT...TCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAGGGAAGAGGTCAGGCTaGGGAGTCCTGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLGKRSG*GVLSYG
Trigger: CCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCC...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGTTATAGGGAAGAGGTCAGGCTaGGGAGTCCTGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: SLFPEAVQLPKSEADSVIGKRSG*GVLSYG
Trigger: CCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCC...TATAACTGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAGGAAGGCAAGGAGTGTaGTGTGTGTTGCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPGRQGV*CVLRVV
Trigger: CACCACCCGCAACACACACCACACTCCTTGCCTTCC...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGGGAAGGCAAGGAGTGTaGTGTGTGTTGCGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RDTSSLDIFRGDNVWYISGRQGV*CVLRVV
Trigger: CACCACCCGCAACACACACCACACTCCTTGCCTTCC...CGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp GCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCTATTCTGGCAACACTTaGGGCTTCCTGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: APGCHWKAGSCYRISPKCYSGNT*GFLNWF
Trigger: AAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATA...GCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp GCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCATGACAAAGGTCATGTaGGATGCTGCTTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: APGCHWKAGSCYRISPKCMTKVM*DAAYSG
Trigger: GCCAGAATAAGCAGCATCCCACATGACCTTTGTCAT...GCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAACCTGGAAAGCCCCAATaGAGTTACATTCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQPGKPQ*SYIPKI
Trigger: AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGG...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTCTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKILWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTCTGGATGTTCCACTATaGCATCCGGCCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RGDNVWYISRLKGGDCFLLDVPL*HPAWKA
Trigger: GGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAG...AAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTAACTCTATCAACCACTaGAGAGTGTCTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLNSINH*RVSSRV
Trigger: GACCCTTGAAGACACTCTTCAGTGGTTGATAGAGTT...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTCTGGGAGATCATAAATaGAGGTTCGTGCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLLGDHK*RFVHCY
Trigger: ATAGCAGTGCACGAACCTTCATTTATGATCTCCCAG...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGTGTGACTCCGGTCACTaGTTTTCAACTGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGCDSGH*FSTGRS
Trigger: TGATCTCCCAGTTGAAAATCAGTGACCGGAGTCACA...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGACACAATGCTGCGGCGTaGACGGCACAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRHNAAA*TAQAAA
Trigger: AGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTG...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAACTTTACAGCGGGACTTaGAACTTCACAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQLYSGT*NFTIVN
Trigger: ATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAG...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATCTTTACAGCGGGACTTaGAACTTCACAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: DSCPSGCSTMASGLESPNLYSGT*NFTIVN
Trigger: ATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAG...ATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATTGTTTATCTTCTCTGTaGAGATGGCTGTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: RENPKTHPQLQANPLGRNCLSSL*RWLCLL
Trigger: TAATAAACACAGCCATCTGCACAGAGAAGATAAACA...ATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAACGGCACAGGCTGCTaGTTCTGGCTAATGATCCAG +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSNGTGC*FWLMIQ
Trigger: CTGGATCATTAGCCAGAAGCAGCAGCCTGTGCCGTT...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGTGAACGGCACAGGCTaGTGCTTCTGGCTAATGATC +
Preference number: 4 (lower is better)
Translates to: LLAGLKIILLVSVRPTQSVNGTG*CFWLMI
Trigger: GATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCAC...CGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAGAACCCCAAGACACGGTCATGTGGGATGCTaGTTATTCTGGCAACACTTG +
Preference number: 4 (lower is better)
Translates to: DHTLSFCQTYTVGRTPRHGHVGC*LFWQHL
Trigger: CAAGTGTTGCCAGAATAAGCAGCATCCCACATGACC...GTGTCTTGGGGTTCTCCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATAAAGGTCATGTGGGATaGTGCTTATTCTGGCAACAC +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDKGHVG*CLFWQH
Trigger: GTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGCAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: GRNPLGTPHLLISFAEIMQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...CATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp CACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCAAGTGTGTAAACAATTaGCTGAATCCCCATATCCCC +
Preference number: 4 (lower is better)
Translates to: HRDATGKLVHATGFLQNAKCVNN*LNPHIP
Trigger: GGGGATATGGGGATTCAGGCAATTGTTTACACACTT...GGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAACTCCTCCAGCAATTaGATAGGGTGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGNSSSN*IGWNGD
Trigger: GTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTT...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp GGTCCTTGTCTCACTTGTCTTGGCAGCTCATGTTATAGGCAAATGCACCTCTCAAACTCCTCCAGCAATTaGATAGGGTGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: GPCLTCLGSSCYRQMHLSNSSSN*IGWNGD
Trigger: GTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTT...TGAGAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAGCACCGGGATGCCACTaGAAAGCTGGTTCATGCTAC +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLAPGCH*KAGSCY
Trigger: GTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTACAGGCTGGGGAGTCCTaGGTTATGGGCTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLQAGES*VMGYLK
Trigger: TTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTG...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGGGTCCCGGGAAATTGTaGCACTATTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQGPGKL*HYWGCV
Trigger: GACACACCCCCAATAGTGTCACAATTTCCCGGGACC...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AACATCACTATTTCTTATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCACAATGCTGCGGCGTaGACGGCACAGGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NITISYIATKQQDSLHSSHNAAA*TAQAAA
Trigger: AGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTG...AGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATAAGAAATAGTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGAAGTCCATTAGACTTTaGTCTGCAGTTTGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: GTGMPLESWFMLQDFSKMKSIRL*SAVCKL
Trigger: GAGCTTACAAACTGCAGAGCAAAGTCTAATGGACTT...CATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp CCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATTTCCAATTCCTGTTCTaGATACTGACGTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: PREESSRDTSSLDIFRGDFQFLF*ILTSTQ
Trigger: TTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAA...ATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp CGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCATCTTCTCAATTTGTTaGCAGCGAAAAAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: RGLGTGMPLESWFMLQDFIFSIC*QRKSRS
Trigger: AGAACGACTTTTTCGCTGGCAACAAATTGAGAAGAT...GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTAACGGCACAGGCTGCTaGTTCTGGCTAATGATCCAG +
Preference number: 4 (lower is better)
Translates to: VHATGFLQNAIVHFACRTNGTGC*FWLMIQ
Trigger: CTGGATCATTAGCCAGAAGCAGCAGCCTGTGCCGTT...AGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAGTGAACGGCACAGGCTaGTGCTTCTGGCTAATGATC +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPVNGTG*CFWLMI
Trigger: GATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCAC...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTTGGAAAGCTGGTTCATaGTACAGGATTTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPWKAGS*YRISPK
Trigger: TTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCA...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATTTTATCATACAGCCTaGAATGCAGTAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQFYHTA*NAVNHS
Trigger: ACTGTGATTTACTGCATTGCAGGCTGTATGATAAAA...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATAAGTGTGTAAACAATTaGCTGAATCCCCATATCCCC +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDKCVNN*LNPHIP
Trigger: GGGGATATGGGGATTCAGGCAATTGTTTACACACTT...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCTCTTCTCTGTGCAGATaGCTGTGTTTATTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ESPREESSRDTSSLDIFRSSLCR*LCLLVA
Trigger: TGCTACTAATAAACACAGCCATCTGCACAGAGAAGA...GCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACGGGAAGAGGTCAGGCTaGGGAGTCCTGAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENGKRSG*GVLSYG
Trigger: CCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCC...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTCGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPRGDNV*YISRLK
Trigger: TTTAAGCCTCGAGATATACCAAACATTATCTCCGCG...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCCGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: HRDATGKLVHATGFLQNARGDNV*YISRLK
Trigger: TTTAAGCCTCGAGATATACCAAACATTATCTCCGCG...GGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp ACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTGCACCGGGATGCCACTaGAAAGCTGGTTCATGCTAC +
Preference number: 4 (lower is better)
Translates to: TSSLDIFRGDNVWYISRLAPGCH*KAGSCY
Trigger: GTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGC...AAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCTGGGGCTTCCTGAACTaGTTTACTGTCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NFCKPMLAYESIKACKSIWGFLN*FTVVAS
Trigger: GCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCA...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTATGGGGCTTCCTGAACTaGTTTACTGTCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLWGFLN*FTVVAS
Trigger: GCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCA...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACCTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: DIFRGDNVWYISRLKGGDLWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...GTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGCTGGATGTTCCACTATaGCATCCGGCCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTLDVPL*HPAWKA
Trigger: GGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAG...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATTTAAGTCAGGAGACTTaGGTTCCTAAGATGGTCCTA +
Preference number: 4 (lower is better)
Translates to: PGCHWKAGSCYRISPKCHLSQET*VPKMVL
Trigger: TAGGACCATCTTAGGAACCCAAGTCTCCTGACTTAA...ATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
3UTR CAA 72 bp CCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTaGATATCTTTCGCGGAGATAATGTTTGGTATATCT +
Preference number: 4 (lower is better)
Translates to: PLGRNPLGTPHL*ISFAEIMFGIS
Trigger: AGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGCAGGCTGGGGAGTCCTaGGTTATGGGCTATCTGAAA +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQQAGES*VMGYLK
Trigger: TTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTG...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAAGGTCCCGGGAAATTGTaGCACTATTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKGPGKL*HYWGCV
Trigger: GACACACCCCCAATAGTGTCACAATTTCCCGGGACC...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp TCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTGGTCCCGGGAAATTGTaGCACTATTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SKMPLYTLLAGLKIILLVGPGKL*HYWGCV
Trigger: GACACACCCCCAATAGTGTCACAATTTCCCGGGACC...AACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTGAAAACAAAACAACATaGTCTTTACAGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLENKTT*SLQRDL
Trigger: CAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTC...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp TGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATATATCACTGTTCCCTaGAGCTGTTCAGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: CSTMASGLESPNGVTFLKYITVP*SCSASK
Trigger: TTTGGAAGCTGAACAGCTTCAGGGAACAGTGATATA...TTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGATAAATGAAGGTTCGTaGACTGCTATCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGINEGS*TAILGS
Trigger: ACTTCCCAGGATAGCAGTGCACGAACCTTCATTTAT...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp AATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTCCAATGGAAAGCTCTGATCCCGGCTaGGTTCATTGGTTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: NVWYISRLKGGDCFLPMESSDPG*VHWFRL
Trigger: TAACCGGAACCAATGAACGCAGCCGGGATCAGAGCT...TTCCATTGGAAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR GCA 90 bp GGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGACAAGCCTCCTCCTTTaGATAATTGATTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GTGMPLESWFMLQDFSKMTSLLL*IIDFIH
Trigger: ATGGATGAAATCAATTATGCAAAGGAGGAGGCTTGT...CATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCCCTTTTTCAGAGCCATaGGAACCTGTTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIPFSEP*EPVPIP
Trigger: AGGAATTGGAACAGGTTCGCATGGCTCTGAAAAAGG...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGTTAGCAATAGCTAGCTaGATTTCAGCGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GTGMPLESWFMLQDFSKMLAIAS*ISAFCL
Trigger: AAGACAAAACGCTGAAATGCAGCTAGCTATTGCTAA...CATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp TTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTAACGGCACAGGCTGCTaGTTCTGGCTAATGATCCAG +
Preference number: 4 (lower is better)
Translates to: LYTLLAGLKIILLVSVRPNGTGC*FWLMIQ
Trigger: CTGGATCATTAGCCAGAAGCAGCAGCCTGTGCCGTT...AGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp AATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTCCAATGGAAGTGAACGGCACAGGCTaGTGCTTCTGGCTAATGATC +
Preference number: 4 (lower is better)
Translates to: NVWYISRLKGGDCFLPMEVNGTG*CFWLMI
Trigger: GATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCAC...TTCCATTGGAAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAGGTCATGTGGGATGCTaGTTATTCTGGCAACACTTG +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSGHVGC*LFWQHL
Trigger: CAAGTGTTGCCAGAATAAGCAGCATCCCACATGACC...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAAGTGGAATGGAGACTCTaGGCATCACCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKVEWRL*ASPPSC
Trigger: ACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCAC...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGGTGGAATGGAGACTCTaGGCATCACCACCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEVEWRL*ASPPSC
Trigger: ACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCAC...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTTGGATAGGGTGGAATaGAGACTCTGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: SFAEIMFGISRGLKEETVLDRVE*RLWASP
Trigger: TGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAA...AACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGAGGAACATGATGTGTaGCGAGGTTTAGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAEEHDV*RGLGTG
Trigger: CCCGGTGCCTAAACCTCGCCACACATCATGTTCCTC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp ATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCTGGGGCTTCCTGAACTaGTTTACTGTCGTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: MPLYTLLAGLKIILLVSVWGFLN*FTVVAS
Trigger: GCTGGCAACGACAGTAAACCAGTTCAGGAAGCCCCA...GACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAGGATGCTGCTTATTCTaGCAACACTTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLGCCLF*QHLGLP
Trigger: AGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCC...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp ATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGGGATGCTGCTTATTCTaGCAACACTTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: MLQDFSKMPLYTLLAGLKGCCLF*QHLGLP
Trigger: AGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCC...CTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp CCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATCCTGGAAAGCCCCAATaGAGTTACATTCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: PGCHWKAGSCYRISPKCHPGKPQ*SYIPKI
Trigger: AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGG...ATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCCTGGAAAGCCCCAATaGAGTTACATTCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDPGKPQ*SYIPKI
Trigger: AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCTGGATGTTCCACTATaGCATCCGGCCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENLDVPL*HPAWKA
Trigger: GGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDLVSPS*LSTKCC
Trigger: GCAACATTTTGTTGAAAGCCACGATGGACTTACAAG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTTCAAGGGTCCAATTATaGACTTCTGATGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLSRVQL*TSDVFH
Trigger: ATGGAAAACATCAGAAGTTCATAATTGGACCCTTGA...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTTGTGACTCCGGTCACTaGTTTTCAACTGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: NPLGTPHLLISFAEIMFGCDSGH*FSTGRS
Trigger: TGATCTCCCAGTTGAAAATCAGTGACCGGAGTCACA...ACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGCATGGTGGACTCAGTaGCATGCAGGGATCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAAWWTQ*HAGICH
Trigger: ATGACAGATCCCTGCATGTCACTGAGTCCACCATGC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp GGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGGAAAACAAAACAACATaGTCTTTACAGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: GRNPLGTPHLLISFAEIMENKTT*SLQRDL
Trigger: CAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTC...CATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCACATGCTCCCTGACTaGAAACAGCCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENHMLPD*KQPTVS
Trigger: AGAGACTGTGGGCTGTTTTCAGTCAGGGAGCATGTG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAGCTCTGATCCCGGCTaGGTTCATTGGTTCCGGTTA +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENSSDPG*VHWFRL
Trigger: TAACCGGAACCAATGAACGCAGCCGGGATCAGAGCT...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGAGCTGTGTGCAACGTaGAGAGTCCCAAAGACTGTG +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAELCAT*RVPKTV
Trigger: CACAGTCTTTGGGACTCTGCACGTTGCACACAGCTC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAAGAGCTGTGTGCAACGTaGAGAGTCCCAAAGACTGTG +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKELCAT*RVPKTV
Trigger: CACAGTCTTTGGGACTCTGCACGTTGCACACAGCTC...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAGGTCATGTGGGATGCTaGTTATTCTGGCAACACTTG +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLGHVGC*LFWQHL
Trigger: CAAGTGTTGCCAGAATAAGCAGCATCCCACATGACC...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTACAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTTCTGTTATGTGGCTTTaGTGCATTGTGTGTGAAATT +
Preference number: 4 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLSVMWL*CIVCEI
Trigger: AATTTCACACACAATGCAGCAAAGCCACATAACAGA...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp TGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATCTTCTCTGTGCAGATaGCTGTGTTTATTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: CSTMASGLESPNGVTFLKSSLCR*LCLLVA
Trigger: TGCTACTAATAAACACAGCCATCTGCACAGAGAAGA...TTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTTTTCTGAAGTGCATCTaGAACAGACCAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIFLKCI*NRPTAS
Trigger: AGAAGCAGTTGGTCTGTTCCAGATGCACTTCAGAAA...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTTGGATAGGGTGGAATaGAGACTCTGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQLDRVE*RLWASP
Trigger: TGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAA...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCAACTCCTCCAGCAATTaGATAGGGTGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: NFCKPMLAYESIKACKSINSSSN*IGWNGD
Trigger: GTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTT...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: RGDNVWYISRLKGGDCFLMPLES*FMLQDF
Trigger: GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCAT...AAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp CGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTTATTCTGGCAACACTTaGGGCTTCCTGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: RGDNVWYISRLKGGDCFLYSGNT*GFLNWF
Trigger: AAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATA...AAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAATGACAAAGGTCATGTaGGATGCTGCTTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSMTKVM*DAAYSG
Trigger: GCCAGAATAAGCAGCATCCCACATGACCTTTGTCAT...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TTACTACTTAGTCTCATTCACTTTTGCACGCACCGAGCCCAAGGTGAATACTGTATGACAAAGGTCATGTaGGATGCTGCTTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLSLIHFCTHRAQGEYCMTKVM*DAAYSG
Trigger: GCCAGAATAAGCAGCATCCCACATGACCTTTGTCAT...ACAGTATTCACCTTGGGCTCGGTGCGTGCAAAAGTGAATGAGACTAAGTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGCTATGGCATCCGGCCTaGAAAGCCCCAATGGAGTTA +
Preference number: 4 (lower is better)
Translates to: YIATKQQDSLHSSPENIVLWHPA*KAPMEL
Trigger: TAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAG...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
3UTR CAA 72 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTaGAACATGATTCCATCAAGTCAGCCAGTTCACTTA +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCH*NMIPSSQPVHL
Trigger: TAAGTGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp ACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTATGACTTCAAACACCTaGTGGGCAGCATTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSSLDIFRGDNVWYISRLMTSNT*WAALSS
Trigger: AGAGCTCAATGCTGCCCATCAGGTGTTTGAAGTCAT...AAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR TCA 90 bp GCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGTCAAGGGTCCAATTATaGACTTCTGATGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: ACRTEDHTLSFCQTYTVGSRVQL*TSDVFH
Trigger: ATGGAAAACATCAGAAGTTCATAATTGGACCCTTGA...CCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp TCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTAACTCTATCAACCACTaGAGAGTGTCTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SFAEIMFGISRGLKEETVNSINH*RVSSRV
Trigger: GACCCTTGAAGACACTCTTCAGTGGTTGATAGAGTT...AACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCAACTCTATCAACCACTaGAGAGTGTCTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: NFCKPMLAYESIKACKSINSINH*RVSSRV
Trigger: GACCCTTGAAGACACTCTTCAGTGGTTGATAGAGTT...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTGTGACTCCGGTCACTaGTTTTCAACTGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQCDSGH*FSTGRS
Trigger: TGATCTCCCAGTTGAAAATCAGTGACCGGAGTCACA...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTCCAATGGAATCTTTCATCCAGTTATaGGGTGGGCGTGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: NVWYISRLKGGDCFLPMESFIQL*GGRVRG
Trigger: ACCTCTAACACGCCCACCTCATAACTGGATGAAAGA...TTCCATTGGAAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAGAGTTATGGGCTATCTaGAAGCCACAGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLELWAI*KPQIFS
Trigger: TGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTC...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGTGGACTCAGTGACATaGAGGGATCCGACTCCTACA +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRVDSVT*RDPTPT
Trigger: TGTAGGAGTCGGATCCCTGCATGTCACTGAGTCCAC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTGAACTGTGTTTATCTTCTCTGTaGAGATGGCTGTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: KGHVGCCLFWQHLGLPELCLSSL*RWLCLL
Trigger: TAATAAACACAGCCATCTGCACAGAGAAGATAAACA...CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp TTACTACTTAGTCTCATTCACTTTTGCACGCACCGAGCCCAAGGTGAATACTGTATAAATGAAGGTTCGTaGACTGCTATCCTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSLIHFCTHRAQGEYCINEGS*TAILGS
Trigger: ACTTCCCAGGATAGCAGTGCACGAACCTTCATTTAT...ACAGTATTCACCTTGGGCTCGGTGCGTGCAAAAGTGAATGAGACTAAGTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp CTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGAAGTCCATTAGACTTTaGTCTGCAGTTTGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: LSIMTKVMWDAAYSGNTWKSIRL*SAVCKL
Trigger: GAGCTTACAAACTGCAGAGCAAAGTCTAATGGACTT...CCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTAGCAATAGCTAGCTaGATTTCAGCGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GRNPLGTPHLLISFAEIMLAIAS*ISAFCL
Trigger: AAGACAAAACGCTGAAATGCAGCTAGCTATTGCTAA...CATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAAGGTCATGTGGGATaGTGCTTATTCTGGCAACAC +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLKGHVG*CLFWQH
Trigger: GTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCCAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: SRDTSSLDIFRGDNVWYIQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...GATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTACACAAACAATGCACATaGTCCCTGACTGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLHKQCT*SLTENS
Trigger: GCTGTTTTCAGTCAGGGAGCATGTGCATTGTTTGTG...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAATTGAGCACAAACAATaGACATGCTCCCTGACTGAA +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSIEHKQ*TCSLTE
Trigger: TTCAGTCAGGGAGCATGTGCATTGTTTGTGCTCAAT...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp TTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGAAGATCGTCTTTACTaGACTACAAGCTCTCGAAAG +
Preference number: 4 (lower is better)
Translates to: LLAGLKIILLVSVRPTQSEDRLY*TTSSRK
Trigger: CTTTCGAGAGCTTGTAGTGCAGTAAAGACGATCTTC...CGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp AAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAGAACCCCAAGACTCTTCTCTGTGCAGATaGCTGTGTTTATTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KIILLVSVRPTQSGEPQDSSLCR*LCLLVA
Trigger: TGCTACTAATAAACACAGCCATCTGCACAGAGAAGA...GTCTTGGGGTTCTCCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp GATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACGCTTCCAGAATTTTGTaGTCTACCTCATCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: DIFRGDNVWYISRLKGGDASRIL*STSSRE
Trigger: CTCCCTAGATGAGGTAGACCACAAAATTCTGGAAGC...GTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp TCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGATTGGATAGGGTGGAATaGAGACTCTGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: SLDIFRGDNVWYISRLKGLDRVE*RLWASP
Trigger: TGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAA...TCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGTTGGATAGGGTGGAATaGAGACTCTGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: YIATKQQDSLHSSPENIVLDRVE*RLWASP
Trigger: TGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAA...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR CCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAACTCCTCCAGCAATTaGATAGGGTGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTNSSSN*IGWNGD
Trigger: GTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTT...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: FMLQDFSKMPLYTLLAGLMPLES*FMLQDF
Trigger: GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCAT...CAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AACATCACTATTTCTTATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTGAGGAACATGATGTGTaGCGAGGTTTAGGCACCGGG +
Preference number: 4 (lower is better)
Translates to: NITISYIATKQQDSLHSSEEHDV*RGLGTG
Trigger: CCCGGTGCCTAAACCTCGCCACACATCATGTTCCTC...AGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATAAGAAATAGTGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR CCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGGGATGCTGCTTATTCTaGCAACACTTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEGCCLF*QHLGLP
Trigger: AGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCC...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSILVSPS*LSTKCC
Trigger: GCAACATTTTGTTGAAAGCCACGATGGACTTACAAG...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAATTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAG +
Preference number: 4 (lower is better)
Translates to: HATGFLQNAIVHFACRTEFASPC*LTSPLK
Trigger: CTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAA...TTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
3UTR CAA 72 bp AGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGACTGAAGATCATACTC +
Preference number: 4 (lower is better)
Translates to: SWFMLQDFSKMP*YTLLAGLKIIL
Trigger: GAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp TTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTCTGGGAGATCATAAATaGAGGTTCGTGCACTGCTAT +
Preference number: 4 (lower is better)
Translates to: LYTLLAGLKIILLVSVRPLGDHK*RFVHCY
Trigger: ATAGCAGTGCACGAACCTTCATTTATGATCTCCCAG...AGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCATCTTTCATCCAGTTATaGGGTGGGCGTGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKASFIQL*GGRVRG
Trigger: ACCTCTAACACGCCCACCTCATAACTGGATGAAAGA...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp TCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGATCTTTCATCCAGTTATaGGGTGGGCGTGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: SLDIFRGDNVWYISRLKGSFIQL*GGRVRG
Trigger: ACCTCTAACACGCCCACCTCATAACTGGATGAAAGA...TCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCTCCTGTTCTGCATACTaGCGTCTACTCAATTCACAT +
Preference number: 4 (lower is better)
Translates to: NFCKPMLAYESIKACKSISCSAY*RLLNSH
Trigger: ATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGA...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp ATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGAGTTATGGGCTATCTaGAAGCCACAGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ISFAEIMFGISRGLKEETELWAI*KPQIFS
Trigger: TGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTC...AGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp AAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAGAACCCCAAGACAATCACTTGATCTCTTaGGGTCTCAATTTTCCTATC +
Preference number: 4 (lower is better)
Translates to: KIILLVSVRPTQSGEPQDNHLIS*GLNFPI
Trigger: GATAGGAAAATTGAGACCTCAAGAGATCAAGTGATT...GTCTTGGGGTTCTCCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp TGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATGTTTATCTTCTCTGTaGAGATGGCTGTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: CSTMASGLESPNGVTFLKCLSSL*RWLCLL
Trigger: TAATAAACACAGCCATCTGCACAGAGAAGATAAACA...TTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAAGTCCATTAGACTTTaGTCTGCAGTTTGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSKSIRL*SAVCKL
Trigger: GAGCTTACAAACTGCAGAGCAAAGTCTAATGGACTT...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGCCTTTTTCAGAGCCATaGGAACCTGTTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: LLISFAEIMFGISRGLKEPFSEP*EPVPIP
Trigger: AGGAATTGGAACAGGTTCGCATGGCTCTGAAAAAGG...CTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp TTTGCACGCACCGAGCCCAAGGTGAATACTGTTCACTCCATGAAAGGAAATGATTTAGCAATAGCTAGCTaGATTTCAGCGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FARTEPKVNTVHSMKGNDLAIAS*ISAFCL
Trigger: AAGACAAAACGCTGAAATGCAGCTAGCTATTGCTAA...ATCATTTCCTTTCATGGAGTGAACAGTATTCACCTTGGGCTCGGTGCGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGCTGGTTTACTGTCGTTaGCAGCTGAGGAACATGATG +
Preference number: 4 (lower is better)
Translates to: YIATKQQDSLHSSPENIVLVYCR*QLRNMM
Trigger: CATCATGTTCCTCAGCTGGCAACGACAGTAAACCAG...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp GATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCACTGGTTTACTGTCGTTaGCAGCTGAGGAACATGATG +
Preference number: 4 (lower is better)
Translates to: DNSLQMPLEHDSIKSASSLVYCR*QLRNMM
Trigger: CATCATGTTCCTCAGCTGGCAACGACAGTAAACCAG...TGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAAAGTGTGTAAACAATTaGCTGAATCCCCATATCCCC +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPKCVNN*LNPHIP
Trigger: GGGGATATGGGGATTCAGGCAATTGTTTACACACTT...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp GTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTCATGTTATAGGCAAATaGACCTCTCATAGCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VHATGFLQNAIVHFACRTHVIGK*TSHSKD
Trigger: GTCCTTGCTATGAGAGGTGCATTTGCCTATAACATG...AGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp TCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGTTATATTTCTGAAGTGCATCTaGAACAGACCAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLFPEAVQLPKSEADSVIFLKCI*NRPTAS
Trigger: AGAAGCAGTTGGTCTGTTCCAGATGCACTTCAGAAA...TATAACTGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGGCTTCCAGAATTTTGTaGTCTACCTCATCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQASRIL*STSSRE
Trigger: CTCCCTAGATGAGGTAGACCACAAAATTCTGGAAGC...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGCTTCCAGAATTTTGTaGTCTACCTCATCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLISFAEIMFGISRGLKEASRIL*STSSRE
Trigger: CTCCCTAGATGAGGTAGACCACAAAATTCTGGAAGC...CTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACTCCTCCAGCAATTaGATAGGGTGGAATGGAGAC +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITENSSSN*IGWNGD
Trigger: GTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTT...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQMPLES*FMLQDF
Trigger: GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCAT...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GAAGATCGTCTTTACTGCACTACAAGCTCTCGAAAGGTACAAAATCCCCTAAATATGCCACTGGAAAGCTaGTTCATGCTACAGGATTTC +
Preference number: 4 (lower is better)
Translates to: EDRLYCTTSSRKVQNPLNMPLES*FMLQDF
Trigger: GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCAT...ATTTAGGGGATTTTGTACCTTTCGAGAGCTTGTAGTGCAGTAAAGACGATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGGATGCTGCTTATTCTaGCAACACTTGGGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRGCCLF*QHLGLP
Trigger: AGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CCTAAGATGGTCCTACCATTAATCAGTTGTAAAAGCCTCAGTAAATCACTTGATGTGGGGAGTGGAGGGTaGGGGATAATAGTTTACAGA +
Preference number: 4 (lower is better)
Translates to: PKMVLPLISCKSLSKSLDVGSGG*GIIVYR
Trigger: TCTGTAAACTATTATCCCCCACCCTCCACTCCCCAC...ATCAAGTGATTTACTGAGGCTTTTACAACTGATTAATGGTAGGACCATCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAG +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQFASPC*LTSPLK
Trigger: CTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAA...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTCCTTCCAATGGAATTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAG +
Preference number: 4 (lower is better)
Translates to: NVWYISRLKGGDCFLPMEFASPC*LTSPLK
Trigger: CTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAA...TTCCATTGGAAGGAAACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAATGTGACTCCGGTCACTaGTTTTCAACTGGGAGATCA +
Preference number: 4 (lower is better)
Translates to: VSPSWLSTKCCIYITENKCDSGH*FSTGRS
Trigger: TGATCTCCCAGTTGAAAATCAGTGACCGGAGTCACA...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGATCTTTCATCCAGTTATaGGGTGGGCGTGTTAGAGGT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRSFIQL*GGRVRG
Trigger: ACCTCTAACACGCCCACCTCATAACTGGATGAAAGA...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp TCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGAGTTATGGGCTATCTaGAAGCCACAGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLDIFRGDNVWYISRLKGELWAI*KPQIFS
Trigger: TGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTC...TCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAATGCAGTAAATCACAGTaGAAGCCCTGGGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKCSKSQ*KPWGKQ
Trigger: TTGTTTTCCCCAGGGCTTTCACTGTGATTTACTGCA...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGTTCCAATTCCTGTTCTaGATACTGACGTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: MLQDFSKMPLYTLLAGLKFQFLF*ILTSTQ
Trigger: TTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAA...CTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCACCTTTTTCAGAGCCATaGGAACCTGTTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAPFSEP*EPVPIP
Trigger: AGGAATTGGAACAGGTTCGCATGGCTCTGAAAAAGG...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGACCTTTTTCAGAGCCATaGGAACCTGTTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: SLDIFRGDNVWYISRLKGPFSEP*EPVPIP
Trigger: AGGAATTGGAACAGGTTCGCATGGCTCTGAAAAAGG...TCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCCTTTTTCAGAGCCATaGGAACCTGTTCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENPFSEP*EPVPIP
Trigger: AGGAATTGGAACAGGTTCGCATGGCTCTGAAAAAGG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGTGGAAAGCTGGTTCATaGTACAGGATTTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: FMLQDFSKMPLYTLLAGLWKAGS*YRISPK
Trigger: TTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCA...CAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGACTGGTTTACTGTCGTTaGCAGCTGAGGAACATGATG +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRLVYCR*QLRNMM
Trigger: CATCATGTTCCTCAGCTGGCAACGACAGTAAACCAG...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGACAGACAGTAGACAGTTaGCCTTCTGGATGTTCCACT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRQTVDS*PSGCST
Trigger: AGTGGAACATCCAGAAGGGCAACTGTCTACTGTCTG...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAAGTGTGTAAACAATTaGCTGAATCCCCATATCCCC +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTKCVNN*LNPHIP
Trigger: GGGGATATGGGGATTCAGGCAATTGTTTACACACTT...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTACGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLRGDNV*YISRLK
Trigger: TTTAAGCCTCGAGATATACCAAACATTATCTCCGCG...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGTATTCTGGCAACACTTaGGGCTTCCTGAACTGGTTT +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEYSGNT*GFLNWF
Trigger: AAACCAGTTCAGGAAGCCCCAAGTGTTGCCAGAATA...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp TGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTACCTGGAAAGCCCCAATaGAGTTACATTCCTAAAATT +
Preference number: 4 (lower is better)
Translates to: CSGKQEIFASPCWLTSPLPGKPQ*SYIPKI
Trigger: AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGG...TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTCTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: NPLGTPHLLISFAEIMFGLVSPS*LSTKCC
Trigger: GCAACATTTTGTTGAAAGCCACGATGGACTTACAAG...ACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAATTTGCAAGCCCATGCTaGCTTACGAGTCCATTAAAG +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKFASPC*LTSPLK
Trigger: CTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAA...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCAAGGGTCCAATTATaGACTTCTGATGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPSRVQL*TSDVFH
Trigger: ATGGAAAACATCAGAAGTTCATAATTGGACCCTTGA...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGAGTTATGGGCTATCTaGAAGCCACAGATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSPSWLSTKCCIYITENKELWAI*KPQIFS
Trigger: TGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTC...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGCTCGAGTTTTCCTTCTaGTTTCCAGAAACCACACAA +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITELEFSF*FPETTQ
Trigger: TTGTGTGGTTTCTGGAAATCAGAAGGAAAACTCGAG...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR TCA 90 bp GCTTTTTGCTTTTCTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCACTCACATATGTCTATaGAGATCGTCTTTACTGCAC +
Preference number: 4 (lower is better)
Translates to: AFCFSLHYDKGHVGCCLFTHICL*RSSLLH
Trigger: GTGCAGTAAAGACGATCTTCATAGACATATGTGAGT...GAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAAGCAAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGCAAAACCACATCCAATaGCTTGAGCTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQQNHIQ*LELKFL
Trigger: CAAAAACTTCAGCTCAAGGCATTGGATGTGGTTTTG...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCCAAAACCACATCCAATaGCTTGAGCTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: MPLYTLLAGLKIILLVSVQNHIQ*LELKFL
Trigger: CAAAAACTTCAGCTCAAGGCATTGGATGTGGTTTTG...GACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTACAAGCCTCCTCCTTTaGATAATTGATTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: VHATGFLQNAIVHFACRTTSLLL*IIDFIH
Trigger: ATGGATGAAATCAATTATGCAAAGGAGGAGGCTTGT...AGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCATCTTCTCAATTTGTTaGCAGCGAAAAAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: NFCKPMLAYESIKACKSIIFSIC*QRKSRS
Trigger: AGAACGACTTTTTCGCTGGCAACAAATTGAGAAGAT...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGTGGAAAGCTGGTTCATaGTACAGGATTTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTWKAGS*YRISPK
Trigger: TTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCA...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCTGGAAAGCTGGTTCATaGTACAGGATTTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: MPLYTLLAGLKIILLVSVWKAGS*YRISPK
Trigger: TTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCA...GACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp ATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTTGGAAAGCTGGTTCATaGTACAGGATTTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ISFAEIMFGISRGLKEETWKAGS*YRISPK
Trigger: TTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCA...AGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAAAAGGTCATGTGGGATaGTGCTTATTCTGGCAACAC +
Preference number: 4 (lower is better)
Translates to: VSPSWLSTKCCIYITENKKGHVG*CLFWQH
Trigger: GTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAATTTTTGCAAGCCCATaGTGGCTTACGAGTCCATTA +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAIFASP*WLTSPL
Trigger: TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAAT...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGATTTTTGCAAGCCCATaGTGGCTTACGAGTCCATTA +
Preference number: 4 (lower is better)
Translates to: YIATKQQDSLHSSPENIVIFASP*WLTSPL
Trigger: TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAAT...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR GCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGATTTTTGCAAGCCCATaGTGGCTTACGAGTCCATTA +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEIFASP*WLTSPL
Trigger: TAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAAT...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAACTTCACAATAGTAAATaGAGTTCAAGAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HATGFLQNAIVHFACRTELHNSK*SSRSFP
Trigger: TGGGAAGCTTCTTGAACTGCATTTACTATTGTGAAG...TTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCACTTCACAATAGTAAATaGAGTTCAAGAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPLHNSK*SSRSFP
Trigger: TGGGAAGCTTCTTGAACTGCATTTACTATTGTGAAG...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGTTATACTTCACAATAGTAAATaGAGTTCAAGAAGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SLFPEAVQLPKSEADSVILHNSK*SSRSFP
Trigger: TGGGAAGCTTCTTGAACTGCATTTACTATTGTGAAG...TATAACTGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAATTTCAATCCGTTTTTaGCCTTACAGAACTCAATCT +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSISIRF*PYRTQS
Trigger: AGATTGAGTTCTGTAAGGGCAAAAACGGATTGAAAT...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp TCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGTTATAAGTTTTATTAGACAGTaGAGCTCTCGAGTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLFPEAVQLPKSEADSVISFIRQ*SSRVFL
Trigger: AAGGAAAACTCGAGAGCTGCACTGTCTAATAAAACT...TATAACTGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp TTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGGTTATGTGGCTTTGCTaGATTGTGTGTGAAATTCTA +
Preference number: 4 (lower is better)
Translates to: FMLQDFSKMPLYTLLAGLVMWLC*IVCEIL
Trigger: TAGAATTTCACACACAATGCAGCAAAGCCACATAAC...CAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCATCACTGATTTTCAACTaGGAGATCATAAATGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSSLIFN*EIINEG
Trigger: ACCTTCATTTATGATCTCCCAGTTGAAAATCAGTGA...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGCTTCCAGAATTTTGTaGTCTACCTCATCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRASRIL*STSSRE
Trigger: CTCCCTAGATGAGGTAGACCACAAAATTCTGGAAGC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAATGACAAAGGTCATGTaGGATGCTGCTTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: VSPSWLSTKCCIYITENKMTKVM*DAAYSG
Trigger: GCCAGAATAAGCAGCATCCCACATGACCTTTGTCAT...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp CTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGTCAAGGGTCCAATTATaGACTTCTGATGTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LLISFAEIMFGISRGLKESRVQL*TSDVFH
Trigger: ATGGAAAACATCAGAAGTTCATAATTGGACCCTTGA...CTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGATCCTGTTCTGCATACTaGCGTCTACTCAATTCACAT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRSCSAY*RLLNSH
Trigger: ATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGA...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCACTTAGACTTTACAGCGGGACTTaGAACTTCACAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SLQMPLEHDSIKSASSLRLYSGT*NFTIVN
Trigger: ATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAG...TCTAAGTGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp GGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCTTTACAGCGGGACTTaGAACTTCACAATAGTAAAT +
Preference number: 4 (lower is better)
Translates to: GIIVYRCHLNMIPSSQPVLYSGT*NFTIVN
Trigger: ATTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAG...AACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR TCA 90 bp TTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACATTGCTATTGAAATaGGAACTGAACGTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LYTLLAGLKIILLVSVRPTLLLK*ELNVPS
Trigger: TGATGGAACGTTCAGTTCTCATTTCAATAGCAATGT...AGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACCAAAACCACATCCAATaGCTTGAGCTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENQNHIQ*LELKFL
Trigger: CAAAAACTTCAGCTCAAGGCATTGGATGTGGTTTTG...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCACAAAACCACATCCAATaGCTTGAGCTGAAGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAQNHIQ*LELKFL
Trigger: CAAAAACTTCAGCTCAAGGCATTGGATGTGGTTTTG...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAAAAGTCCATTAGACTTTaGTCTGCAGTTTGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKKSIRL*SAVCKL
Trigger: GAGCTTACAAACTGCAGAGCAAAGTCTAATGGACTT...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCATTCCAATTCCTGTTCTaGATACTGACGTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAFQFLF*ILTSTQ
Trigger: TTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAA...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAATTCCAATTCCTGTTCTaGATACTGACGTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKFQFLF*ILTSTQ
Trigger: TTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAA...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGTTAGCAATAGCTAGCTaGATTTCAGCGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTLAIAS*ISAFCL
Trigger: AAGACAAAACGCTGAAATGCAGCTAGCTATTGCTAA...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTTTTTATCATACAGCCTaGAATGCAGTAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: SFAEIMFGISRGLKEETVFYHTA*NAVNHS
Trigger: ACTGTGATTTACTGCATTGCAGGCTGTATGATAAAA...AACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR GCA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTACACCTACGTGTGCTaGATAATTCTCAAATGCTTT +
Preference number: 4 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQYTYVC*IILKCF
Trigger: AAAGCATTTGAGAATTATGCAGCACACGTAGGTGTA...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCATCTTCTCTGTGCAGATaGCTGTGTTTATTAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKASSLCR*LCLLVA
Trigger: TGCTACTAATAAACACAGCCATCTGCACAGAGAAGA...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
3UTR CAA 72 bp ATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTaGCTTGCAGGACTGAAGATCATACTCTTAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MLQDFSKMPLYT*LAGLKIILLVS
Trigger: AGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR TCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGCCAATTATGAACTTCTaGTGTTTTCCATCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEPIMNF*CFPSFP
Trigger: TGGAAACGATGGAAAACATCAGAAGTTCATAATTGG...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCACCAATTATGAACTTCTaGTGTTTTCCATCGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SPSWLSTKCCIYITENKAPIMNF*CFPSFP
Trigger: TGGAAACGATGGAAAACATCAGAAGTTCATAATTGG...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp AACATCACTATTTCTTATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTTCCTGTTCTGCATACTaGCGTCTACTCAATTCACAT +
Preference number: 4 (lower is better)
Translates to: NITISYIATKQQDSLHSSSCSAY*RLLNSH
Trigger: ATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGA...AGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATAAGAAATAGTGATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR TCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGAAAACAAAACAACATaGTCTTTACAGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRENKTT*SLQRDL
Trigger: CAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR TCA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGAAAACAAAACAACATaGTCTTTACAGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VSPSWLSTKCCIYITENKENKTT*SLQRDL
Trigger: CAAGTCCCGCTGTAAAGATCATGTTGTTTTGTTTTC...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGTGTTTATCTTCTCTGTaGAGATGGCTGTGTTTATTA +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTCLSSL*RWLCLL
Trigger: TAATAAACACAGCCATCTGCACAGAGAAGATAAACA...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACACAAGCCTCCTCCTTTaGATAATTGATTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENTSLLL*IIDFIH
Trigger: ATGGATGAAATCAATTATGCAAAGGAGGAGGCTTGT...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGACAAGCCTCCTCCTTTaGATAATTGATTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITETSLLL*IIDFIH
Trigger: ATGGATGAAATCAATTATGCAAAGGAGGAGGCTTGT...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGATTCCAATTCCTGTTCTaGATACTGACGTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRFQFLF*ILTSTQ
Trigger: TTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAA...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAATTAGCAATAGCTAGCTaGATTTCAGCGTTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKLAIAS*ISAFCL
Trigger: AAGACAAAACGCTGAAATGCAGCTAGCTATTGCTAA...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGATCTTCTCAATTTGTTaGCAGCGAAAAAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEIFSIC*QRKSRS
Trigger: AGAACGACTTTTTCGCTGGCAACAAATTGAGAAGAT...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR GCA 90 bp TCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTATCTTCTCAATTTGTTaGCAGCGAAAAAGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: SKMPLYTLLAGLKIILLVIFSIC*QRKSRS
Trigger: AGAACGACTTTTTCGCTGGCAACAAATTGAGAAGAT...AACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR GCA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGTTTTATCATACAGCCTaGAATGCAGTAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTFYHTA*NAVNHS
Trigger: ACTGTGATTTACTGCATTGCAGGCTGTATGATAAAA...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp AAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTCGCGGAGATAATGTTTaGTATATCTCGAGGCTTAAA +
Preference number: 4 (lower is better)
Translates to: KMPLYTLLAGLKIILLVSRGDNV*YISRLK
Trigger: TTTAAGCCTCGAGATATACCAAACATTATCTCCGCG...AGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CCA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAACTTGTAAGTCCATCGTaGCTTTCAACAAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: VSPSWLSTKCCIYITENKLVSPS*LSTKCC
Trigger: GCAACATTTTGTTGAAAGCCACGATGGACTTACAAG...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGATTCTCTTCTGTTATGTaGCTTTGCTGCATTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRFSSVM*LCCIVC
Trigger: ACACACAATGCAGCAAAGCCACATAACAGAAGAGAA...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR GCA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAACATCCATCTGCATTaGAGTAACCAAATCACTTAT +
Preference number: 4 (lower is better)
Translates to: LVSPSWLSTKCCIYITENNIHLH*SNQITY
Trigger: ATAAGTGATTTGGTTACTGCAATGCAGATGGATGTT...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR GCA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGATTTTATCATACAGCCTaGAATGCAGTAAATCACAGT +
Preference number: 4 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRFYHTA*NAVNHS
Trigger: ACTGTGATTTACTGCATTGCAGGCTGTATGATAAAA...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS GCA 90 bp GAGGCGGCAGTTGCGGCAGAGCCAGTCGCCCGCCGCCCGCGGAGGTaGCGGGGCACAAGCTCGCATCCGTCCGCCGCTCCGGCTACCAGC +
Preference number: 5 (lower is better)
Translates to: EAAVAAEPVARRPRR*RGTSSHPSAAPATS
Trigger: GCTGGTAGCCGGAGCGGCGGACGGATGCGAGCTTGTGCCCCGGCACCTCCGCGGGCGGCGGGCGACTGGCTCTGCCGCAACTGCCGCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS GCA 90 bp GGTGCACGACACCCGCGCTGCTGCTGCGGCGAGACCGGGATCCGCTaGTCTGGCGCCGCCAAACACCAACCCCAGCTCCCGCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: GARHPRCCCGETGIR*SGAAKHQPQLPRRR
Trigger: GCGGCGGCGCGGGAGCTGGGGTTGGTGTTTGGCGGCGCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGCACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS GCA 90 bp TCTAGAATCAGGCAAACCCGCTGCCTCCTGCCGGCTTCCCCCAGGTaGGCGAGTTCTCAAGCTGCTGGGTTCCGGGACGCCGCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: SRIRQTRCLLPASPR*ASSQAAGFRDAARR
Trigger: GCGGCGCGCGGCGTCCCGGAACCCAGCAGCTTGAGAACTCGCGCACCTGGGGGAAGCCGGCAGGAGGCAGCGGGTTTGCCTGATTCTAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS GCA 90 bp AAAGGTACGGCGTCTTCAGGCGGTGCACGACACCCGCGCTGCTGCTaGGGCGAGACCGGGATCCGCTGCTCTGGCGCCGCCAAACACCAA +
Preference number: 5 (lower is better)
Translates to: KGTASSGGARHPRCC*GETGIRCSGAAKHQ
Trigger: TTGGTGTTTGGCGGCGCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGCCGTACCTTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS TCA 90 bp GAGAAACCACCGCATTGCTCAGCTTGGAAGATCGGAGAGCCCGACTaGAGGGAGGGGAATCAGTGCCGTCGAGAGGCTCGGCGAGGGCGG +
Preference number: 5 (lower is better)
Translates to: EKPPHCSAWKIGEPD*REGNQCRREARRGR
Trigger: CCGCCCTCGCCGAGCCTCTCGACGGCACTGATTCCCCTCCCTTCAGTCGGGCTCTCCGATCTTCCAAGCTGAGCAATGCGGTGGTTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 90 bp CACAAGGTTGTTAGCGGCGGCGGGAGAATAAACAGGGAAAGCCCTTaGGCGGAGCCCGGCACACAGGTGCGTTGCCATCCCTTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: HKVVSGGGRINRESP*AEPGTQVRCHPLGR
Trigger: TCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGCAAGGGCTTTCCCTGTTTATTCTCCCGCCGCCGCTAACAACCTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS GCA 90 bp GAGCAAGCTGAGCTCGCTGAGGCTGAGGCGAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGCTGCTGCTTCTGGCTAATGATCCAG +
Preference number: 5 (lower is better)
Translates to: EQAELAEAEARTAQC*GVNGTGCCFWLMIQ
Trigger: CTGGATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGCCTCAGCCTCAGCGAGCTCAGCTTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS GCA 90 bp GTGGAGCAAGCTGAGCTCGCTGAGGCTGAGGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACAGGCTGCTGCTTCTGGCTAATGATC +
Preference number: 5 (lower is better)
Translates to: VEQAELAEAEARTAQ*CGVNGTGCCFWLMI
Trigger: GATCATTAGCCAGAAGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGCCTCAGCCTCAGCGAGCTCAGCTTGCTCCAC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS CCA 90 bp AAAGCCCTTGCGCGGAGCCCGGCACACAGGTGCGTTGCCATCCCTTaGGGAGAACTGGCTCTGGGCGTGCATTCTAAGCGTGTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: KALARSPAHRCVAIP*GELALGVHSKRVLG
Trigger: GCCAAGAACACGCTTAGAATGCACGCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGCAAGGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS GCA 90 bp AAAGCGTACCAGGCCGTGTACATGTGGTCCCTGGCTGTCTCCAACTaGACACTCCCTTGTGTTCCTGTAACATGCCAACCTCGAGACCCC +
Preference number: 5 (lower is better)
Translates to: KAYQAVYMWSLAVSN*TLPCVPVTCQPRDP
Trigger: GGGGTCTCGAGGTTGGCATGTTACAGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCCTGGTACGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS GCA 90 bp TGCCAACCTCGAGACCCCTCAGGGCCCTGCATTTGCTGTTCCCTCTaGTTGGTGTTATCTACTCTCCATCTCCACGTGGCTTACTTCTCC +
Preference number: 5 (lower is better)
Translates to: CQPRDPSGPCICCSL*LVLSTLHLHVAYFS
Trigger: GGAGAAGTAAGCCACGTGGAGATGGAGAGTAGATAACACCAAGCAGAGGGAACAGCAAATGCAGGGCCCTGAGGGGTCTCGAGGTTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS-3UTR CAA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTCAGCCCACAGTCTCTTaGGCCAGCCTCCTCCACTCT +
Preference number: 5 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPQPTVS*ASLLHS
Trigger: AGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTG...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS GCA 90 bp GTTCCTGTAACATGCCAACCTCGAGACCCCTCAGGGCCCTGCATTTaGTGTTCCCTCTGCTTGGTGTTATCTACTCTCCATCTCCACGTG +
Preference number: 5 (lower is better)
Translates to: VPVTCQPRDPSGPCI*CSLCLVLSTLHLHV
Trigger: CACGTGGAGATGGAGAGTAGATAACACCAAGCAGAGGGAACAGCAAATGCAGGGCCCTGAGGGGTCTCGAGGTTGGCATGTTACAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS-3UTR CAA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAAAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTG +
Preference number: 5 (lower is better)
Translates to: SGEPQDTSTVTGESPREEKAQGN*TLRGYL
Trigger: CAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTT...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGCAGACAGTAGACAGTaGCCCTTCTGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: SCPSGCSTMASGLESPNGADSRQ*PFWMFH
Trigger: GTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGC...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS CCA 90 bp GGGCTCTCTTGCTTTACAGGTGGCACCTTGTTGCTATATCCCTGCTaGCACTTCTGCAGCACGAAAGAGAAACCACCGCATTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GLSCFTGGTLLLYPC*HFCSTKEKPPHCSA
Trigger: AGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCAAGAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS-3UTR CAA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAACTTGAGCTGAAGTTTTaGTCTGTGACTCCGGTCACT +
Preference number: 5 (lower is better)
Translates to: SGEPQDTSTVTGESPREELELKF*SVTPVT
Trigger: AGTGACCGGAGTCACAGACAAAAACTTCAGCTCAAG...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS GCA 90 bp TCAGTGTCTGGTGAGGGCTCTCTTGCTTTACAGGTGGCACCTTGTTaGTATATCCCTGCTGGCACTTCTGCAGCACGAAAGAGAAACCAC +
Preference number: 5 (lower is better)
Translates to: SVSGEGSLALQVAPC*YIPAGTSAARKRNH
Trigger: GTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCAAGAGAGCCCTCACCAGACACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CCA 90 bp GTAAGATCCAAAGTCCTTGTCAAAGCGTACCAGGCCGTGTACATGTaGTCCCTGGCTGTCTCCAACTGCACACTCCCTTGTGTTCCATTG +
Preference number: 5 (lower is better)
Translates to: VRSKVLVKAYQAVYM*SLAVSNCTLPCVPL
Trigger: CAATGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCCTGGTACGCTTTGACAAGGACTTTGGATCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS CCA 90 bp GTAAGATCCAAAGTCCTTGTCAAAGCGTACCAGGCCGTGTACATGTaGTCCCTGGCTGTCTCCAACTGCACACTCCCTTGTGTTCCTGTA +
Preference number: 5 (lower is better)
Translates to: VRSKVLVKAYQAVYM*SLAVSNCTLPCVPV
Trigger: TACAGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCCTGGTACGCTTTGACAAGGACTTTGGATCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS-3UTR CAA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTGTCTGGCACTTCCCATaGCTTTTCAGCAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: CPSGCSTMASGLESPNGVVWHFP*LFSREV
Trigger: TACTTCTCTGCTGAAAAGCAATGGGAAGTGCCAGAC...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465503.6
ENST00000467087.7
CDS-3UTR CAA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTGGGACACCTCATCTCTaGATATCTTTCGCGGAGATA +
Preference number: 5 (lower is better)
Translates to: CPSGCSTMASGLESPNGVGTPHL*ISFAEI
Trigger: TATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCC...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACTGGTTTACTGTCGTaGCCAGCTGAGGAACATGAT +
Preference number: 5 (lower is better)
Translates to: CPSGCSTMASGLESPNGVTGLLS*PAEEHD
Trigger: ATCATGTTCCTCAGCTGGCAACGACAGTAAACCAGT...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTGCAGACAGTAGACAGTaGCCCTTCTGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: WMFHYGIRPGKPQWSYIPADSRQ*PFWMFH
Trigger: GTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGC...AGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTGAGCAGCAGTGGGCCTaGCTAACAGCTCCTCCCATC +
Preference number: 5 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIEQQWA*LTAPPI
Trigger: GATGGGAGGAGCTGTTAGCAAGGCCCACTGCTGCTC...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS GCA 90 bp TGCTTTACAGGTGGCACCTTGTTGCTATATCCCTGCTGGCACTTCTaGAGCACGAAAGAGAAACCACCGCATTGCTCAGCTTGGAAGATC +
Preference number: 5 (lower is better)
Translates to: CFTGGTLLLYPCWHF*STKEKPPHCSAWKI
Trigger: GATCTTCCAAGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CCA 90 bp GCATCACCACCCAGCTGTGATCAGAATAAAGGGAAGAGGTCAGGCTaGGGAGTCCTGAGTTATGGGCTATCTGAAAGCCACAGATCTTCT +
Preference number: 5 (lower is better)
Translates to: ASPPSCDQNKGKRSG*GVLSYGLSESHRSS
Trigger: AGAAGATCTGTGGCTTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCCTTTATTCTGATCACAGCTGGGTGGTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAATCGTTCTCGTAAACAAGTaGTCAACTCAGAGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: GRTPRHIHSYRRIPSGGIVLVNK*STQREL
Trigger: AAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAAC...GATTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGACAGAGAGAGCTTTCTTaGCTTCCAGAATTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: SCPSGCSTMASGLESPNGQRELS*LPEFCG
Trigger: ACCACAAAATTCTGGAAGCAAAGAAAGCTCTCTCTG...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAAGATCTTCTCAATTTGTaGCCAGCGAAAAAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: RQLPFWMFHYGIRPGKPQDLLNL*PAKKSF
Trigger: GAACGACTTTTTCGCTGGCAACAAATTGAGAAGATC...TTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAACAGATCTTCTCAATTaGTTGCCAGCGAAAAAGTCG +
Preference number: 5 (lower is better)
Translates to: SCPSGCSTMASGLESPNGTDLLN*LPAKKS
Trigger: CGACTTTTTCGCTGGCAACAAATTGAGAAGATCTGT...TCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTAAAGTGTGTAAACAATaGCCTGAATCCCCATATCCC +
Preference number: 5 (lower is better)
Translates to: CPSGCSTMASGLESPNGVKVCKQ*PESPYP
Trigger: GGGATATGGGGATTCAGGCAATTGTTTACACACTTT...AACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS CCA 90 bp CTTCATCTAAGTCATCAACTCCTCCAGCAATTGGATAGGGTGGAATaGAGACTCTGGGCATCACCACCCAGCTGTGATCAGAATAAAGGG +
Preference number: 5 (lower is better)
Translates to: LHLSHQLLQQLDRVE*RLWASPPSCDQNKG
Trigger: CCCTTTATTCTGATCACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTTGATGACTTAGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GAAAACAGCCCACAGTCTCTTTGGCCAGCCTCCTCCACTCTAAGCAGCAGTGCCCCATTTGTTTATGTATaGTTTGAAGAGCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: ENSPQSLWPASSTLSSSAPFVYV*FEELPD
Trigger: GTCTGGAAGCTCTTCAAACAATACATAAACAAATGG...GGCACTGCTGCTTAGAGTGGAGGAGGCTGGCCAAAGAGACTGTGGGCTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR CAA 90 bp TGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAAAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTG +
Preference number: 5 (lower is better)
Translates to: CSTMASGLESPNGVTFLKKAQGN*TLRGYL
Trigger: CAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTT...TTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTGGGACACCTCATCTCTaGATATCTTTCGCGGAGATA +
Preference number: 5 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLGTPHL*ISFAEI
Trigger: TATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCC...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGATTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: SPREESSRDTSSLDIFRGFSKMP*YTLLAG
Trigger: TCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAA...TCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp CAGTTACAGGCGAATCCCCTCGGGAGGAATCCTCTAGGGACACCTCATCTCTTGGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 5 (lower is better)
Translates to: QLQANPLGRNPLGTPHLLVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...CAAGAGATGAGGTGTCCCTAGAGGATTCCTCCCGAGGGGATTCGCCTGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTGCAGACAGTAGACAGTaGCCCTTCTGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKIADSRQ*PFWMFH
Trigger: GTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGC...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GACAGTTGCCCTTCTGGATGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGTAAACAAGAAATTTTaGCAAGCCCATGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: DSCPSGCSTMASGLESPNVNKKF*QAHAGL
Trigger: TAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTAC...ATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACATCCAGAAGGGCAACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CGAGGTTTAGGCACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCAAAGTGTGTAAACAATaGCCTGAATCCCCATATCCC +
Preference number: 5 (lower is better)
Translates to: RGLGTGMPLESWFMLQDFKVCKQ*PESPYP
Trigger: GGGATATGGGGATTCAGGCAATTGTTTACACACTTT...GAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTGCCTAAACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp TCGGGAGAACCCCAAGACACATCCACAGTTACAGGCGAATCCCCTCGGGAGGAAGACTATGATCATACATaGCTTTTCAGCAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: SGEPQDTSTVTGESPREEDYDHT*LFSREV
Trigger: TACTTCTCTGCTGAAAAGCAATGTATGATCATAGTC...TTCCTCCCGAGGGGATTCGCCTGTAACTGTGGATGTGTCTTGGGGTTCTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS TCA 90 bp CCAGCTGTGATCAGAATAAAGGGAAGAGGTCAGGCTGGGGAGTCCTaGGTTATGGGCTATCTGAAAGCCACAGATCTTCTCAATTTGTTG +
Preference number: 5 (lower is better)
Translates to: PAVIRIKGRGQAGES*VMGYLKATDLLNLL
Trigger: CAACAAATTGAGAAGATCTGTGGCTTTCAGATAGCCCATAACTCAGGACTCCCCAGCCTGACCTCTTCCCTTTATTCTGATCACAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp CACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCCAGAGAGAGCTTTCTTaGCTTCCAGAATTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: HRDATGKLVHATGFLQNAQRELS*LPEFCG
Trigger: ACCACAAAATTCTGGAAGCAAAGAAAGCTCTCTCTG...GGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp CCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATATGCCATTGTACACTTaGCTTGCAGGACTGAAGATC +
Preference number: 5 (lower is better)
Translates to: PGCHWKAGSCYRISPKCHMPLYT*LAGLKI
Trigger: GATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT...ATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GGTCCTTGTCTCACTTGTCTTGGCAGCTCATGTTATAGGCAAATGCACCTCTCACTTGTCTCACTTGTCTaGGCAGCTCATGTTATAGGC +
Preference number: 5 (lower is better)
Translates to: GPCLTCLGSSCYRQMHLSLVSLV*AAHVIG
Trigger: GCCTATAACATGAGCTGCCAAGACAAGTGAGACAAG...TGAGAGGTGCATTTGCCTATAACATGAGCTGCCAAGACAAGTGAGACAAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS TCA 90 bp TTGTCTGTGACTCCGGTCACTGATTTTCAACTGGGAGATCATAAATaGAGGTTCGTGCACTGCTATCCTGGGAAGTGTCGTTCCTTTGAC +
Preference number: 5 (lower is better)
Translates to: LSVTPVTDFQLGDHK*RFVHCYPGKCRSFD
Trigger: GTCAAAGGAACGACACTTCCCAGGATAGCAGTGCACGAACCTTCATTTATGATCTCCCAGTTGAAAATCAGTGACCGGAGTCACAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463501.5
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
ENST00000494628.6
CDS TCA 90 bp TTTTTCAGAGCCATGCGAACCTGTTCCAATTCCTGTTCTGCATACTaGCGTCTACTCAATTCACATTCAGCTCCCTCCCTTAGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: FFRAMRTCSNSCSAY*RLLNSHSAPSLSSL
Trigger: GAGAGAGCTAAGGGAGGGAGCTGAATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAACAGGTTCGCATGGCTCTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp CTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGCTTGAGCTGAAGTTTTaGTCTGTGACTCCGGTCACT +
Preference number: 5 (lower is better)
Translates to: LSIMTKVMWDAAYSGNTWLELKF*SVTPVT
Trigger: AGTGACCGGAGTCACAGACAAAAACTTCAGCTCAAG...CCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp CCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATTTTGCTTCCAGAATTTaGTGGTCTACCTCATCTAGG +
Preference number: 5 (lower is better)
Translates to: PGCHWKAGSCYRISPKCHFASRI*WSTSSR
Trigger: CCTAGATGAGGTAGACCACAAAATTCTGGAAGCAAA...ATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGTGGCTTGATCTTCTCAATTTGTaGCCAGCGAAAAAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: ASPCWLTSPLKLVSPSWLDLLNL*PAKKSF
Trigger: GAACGACTTTTTCGCTGGCAACAAATTGAGAAGATC...AAGCCACGATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATACAGATCTTCTCAATTaGTTGCCAGCGAAAAAGTCG +
Preference number: 5 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDTDLLN*LPAKKS
Trigger: CGACTTTTTCGCTGGCAACAAATTGAGAAGATCTGT...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCGTCTGGCACTTCCCATaGCTTTTCAGCAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIVWHFP*LFSREV
Trigger: TACTTCTCTGCTGAAAAGCAATGGGAAGTGCCAGAC...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465503.6
ENST00000467087.7
CDS-3UTR CAA 90 bp CGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATTATGCCATTGTACACTTaGCTTGCAGGACTGAAGATC +
Preference number: 5 (lower is better)
Translates to: RDATGKLVHATGFLQNAIMPLYT*LAGLKI
Trigger: GATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT...AATGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTGAACTGTTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: KGHVGCCLFWQHLGLPELFSKMP*YTLLAG
Trigger: TCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAA...CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTGAACTGTTTCAACTCTTCCACTaGCATAAGGAATCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: KGHVGCCLFWQHLGLPELFQLFH*HKESRA
Trigger: GGCTCTTGATTCCTTATGCAAGTGGAAGAGTTGAAA...CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS CCA 90 bp AGAGTGTATTGGACTGGAGTTTTAAGTGTTTATTCCTCTCACTACTaGAACCGGAAAGGAACTAGGGATCCGGCAAGCACTCAAAAGACC +
Preference number: 5 (lower is better)
Translates to: RVYWTGVLSVYSSHY*NRKGTRDPASTQKT
Trigger: GGTCTTTTGAGTGCTTGCCGGATCCCTAGTTCCTTTCCGGTTCCAGTAGTGAGAGGAATAAACACTTAAAACTCCAGTCCAATACACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS-3UTR CAA 90 bp AAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGGCTTCCTGAACTGGGAAGTGTCGTTCCTTaGACATTGTTGTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: KGHVGCCLFWQHLGLPELGSVVP*TLLSLK
Trigger: TTTTAGAGACAACAATGTCAAAGGAACGACACTTCC...CAGTTCAGGAAGCCCCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCACTTGAGCTGAAGTTTTaGTCTGTGACTCCGGTCACT +
Preference number: 5 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSLELKF*SVTPVT
Trigger: AGTGACCGGAGTCACAGACAAAAACTTCAGCTCAAG...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTG +
Preference number: 5 (lower is better)
Translates to: FMLQDFSKMPLYTLLAGLKAQGN*TLRGYL
Trigger: CAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTT...CAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp TTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGGACACCTCATCTCTaGATATCTTTCGCGGAGATA +
Preference number: 5 (lower is better)
Translates to: LLAGLKIILLVSVRPTQSGTPHL*ISFAEI
Trigger: TATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCC...CGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCATGCCATTGTACACTTaGCTTGCAGGACTGAAGATC +
Preference number: 5 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIMPLYT*LAGLKI
Trigger: GATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGTTGTGTCTGGCACTTCCTaGAAACTTCCCAGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: SFAEIMFGISRGLKEETVVSGTS*KLPSAF
Trigger: GAAAGCACTGGGAAGTTTCAAGGAAGTGCCAGACAC...AACAGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS-3UTR CAA 90 bp ACCGGGATGCCACTGGAAAGCTGGTTCATGCTACAGGATTTCTCCAAAATGCCATCTGCAAAGCCTTTTTaGGAATGGCTGTCCATTAAT +
Preference number: 5 (lower is better)
Translates to: TGMPLESWFMLQDFSKMPSAKPF*EWLSIN
Trigger: ATTAATGGACAGCCATTCCAAAAAAGGCTTTGCAGA...TGGCATTTTGGAGAAATCCTGTAGCATGAACCAGCTTTCCAGTGGCATCCCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CAA 90 bp GAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCTTTGCTTCCAGAATTTaGTGGTCTACCTCATCTAGG +
Preference number: 5 (lower is better)
Translates to: EWRVGDNSLQMPLEHDSIFASRI*WSTSSR
Trigger: CCTAGATGAGGTAGACCACAAAATTCTGGAAGCAAA...GATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTG +
Preference number: 5 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTKAQGN*TLRGYL
Trigger: CAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTT...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAACTGGTTTACTGTCGTaGCCAGCTGAGGAACATGAT +
Preference number: 5 (lower is better)
Translates to: HATGFLQNAIVHFACRTETGLLS*PAEEHD
Trigger: ATCATGTTCCTCAGCTGGCAACGACAGTAAACCAGT...TTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp GGTGGGGAGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATCAAACCGTAAATCCTTaGCAGTTATTCAAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: GGEWRVGDNSLQMPLEHDQTVNP*QLFKVC
Trigger: ACACACTTTGAATAACTGCAAAGGATTTACGGTTTG...ATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACTCCCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGTTCTCGTAAACAAGTaGTCAACTCAGAGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: LLAGLKIILLVSVRPTQSVLVNK*STQREL
Trigger: AAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAAC...CGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGGATCTTCTCAATTTGTaGCCAGCGAAAAAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: ESSRDTSSLDIFRGDNVWDLLNL*PAKKSF
Trigger: GAACGACTTTTTCGCTGGCAACAAATTGAGAAGATC...CCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GAGGAATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTACAGATCTTCTCAATTaGTTGCCAGCGAAAAAGTCG +
Preference number: 5 (lower is better)
Translates to: EESSRDTSSLDIFRGDNVTDLLN*LPAKKS
Trigger: CGACTTTTTCGCTGGCAACAAATTGAGAAGATCTGT...AACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATTCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp TCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCGGGACACCTCATCTCTaGATATCTTTCGCGGAGATA +
Preference number: 5 (lower is better)
Translates to: SRDTSSLDIFRGDNVWYIGTPHL*ISFAEI
Trigger: TATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCC...GATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGACTGGTTTACTGTCGTaGCCAGCTGAGGAACATGAT +
Preference number: 5 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTTGLLS*PAEEHD
Trigger: ATCATGTTCCTCAGCTGGCAACGACAGTAAACCAGT...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCACTGGTTTACTGTCGTaGCCAGCTGAGGAACATGAT +
Preference number: 5 (lower is better)
Translates to: SRDTSSLDIFRGDNVWYITGLLS*PAEEHD
Trigger: ATCATGTTCCTCAGCTGGCAACGACAGTAAACCAGT...GATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGCAGACAGTAGACAGTaGCCCTTCTGGATGTTCCAC +
Preference number: 5 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRADSRQ*PFWMFH
Trigger: GTGGAACATCCAGAAGGGCAACTGTCTACTGTCTGC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCTGGCAACACTTGGGTAAACAAGAAATTTTaGCAAGCCCATGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LSIMTKVMWDAAYSGNTWVNKKF*QAHAGL
Trigger: TAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTAC...CCAAGTGTTGCCAGAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp TGTTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATCTTTACAGCGGGACTaGAAACTTCACAATAGTAAA +
Preference number: 5 (lower is better)
Translates to: CSTMASGLESPNGVTFLKSLQRD*KLHNSK
Trigger: TTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGA...TTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCATTTCAACTCTTCCACTaGCATAAGGAATCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSFQLFH*HKESRA
Trigger: GGCTCTTGATTCCTTATGCAAGTGGAAGAGTTGAAA...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AAGATCATACTCTTAGTTTCTGTCAGACCTACACAGTCGGGAGAACCCCAAGACCCATTTGTTTATGTATaGTTTGAAGAGCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: KIILLVSVRPTQSGEPQDPFVYV*FEELPD
Trigger: GTCTGGAAGCTCTTCAAACAATACATAAACAAATGG...GTCTTGGGGTTCTCCCGACTGTGTAGGTCTGACAGAAACTAAGAGTATGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCAGGAAGTGTCGTTCCTTaGACATTGTTGTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSGSVVP*TLLSLK
Trigger: TTTTAGAGACAACAATGTCAAAGGAACGACACTTCC...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCACTTGAGCTGAAGTTTTaGTCTGTGACTCCGGTCACT +
Preference number: 5 (lower is better)
Translates to: SPSWLSTKCCIYITENKALELKF*SVTPVT
Trigger: AGTGACCGGAGTCACAGACAAAAACTTCAGCTCAAG...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTCAGAGAGAGCTTTCTTaGCTTCCAGAATTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: NPLGTPHLLISFAEIMFGQRELS*LPEFCG
Trigger: ACCACAAAATTCTGGAAGCAAAGAAAGCTCTCTCTG...ACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp TCACTGTTCCCTGAAGCTGTTCAGCTTCCAAAGTCAGAAGCTGATTCAGTTATACAGAGAGAGCTTTCTTaGCTTCCAGAATTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: SLFPEAVQLPKSEADSVIQRELS*LPEFCG
Trigger: ACCACAAAATTCTGGAAGCAAAGAAAGCTCTCTCTG...TATAACTGAATCAGCTTCTGACTTTGGAAGCTGAACAGCTTCAGGGAACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CAA 90 bp GTTCATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGTTCTCGTAAACAAGTaGTCAACTCAGAGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: VHATGFLQNAIVHFACRTVLVNK*STQREL
Trigger: AAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAAC...AGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGATCTTCTCAATTTGTaGCCAGCGAAAAAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: NFCKPMLAYESIKACKSIDLLNL*PAKKSF
Trigger: GAACGACTTTTTCGCTGGCAACAAATTGAGAAGATC...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCACAGATCTTCTCAATTaGTTGCCAGCGAAAAAGTCG +
Preference number: 5 (lower is better)
Translates to: NFCKPMLAYESIKACKSITDLLN*LPAKKS
Trigger: CGACTTTTTCGCTGGCAACAAATTGAGAAGATCTGT...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCTCGACAGATCTTCTCAATTaGTTGCCAGCGAAAAAGTCG +
Preference number: 5 (lower is better)
Translates to: RDTSSLDIFRGDNVWYISTDLLN*LPAKKS
Trigger: CGACTTTTTCGCTGGCAACAAATTGAGAAGATCTGT...CGAGATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTG +
Preference number: 5 (lower is better)
Translates to: VSPSWLSTKCCIYITENKKAQGN*TLRGYL
Trigger: CAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTT...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AATGCAGTTCAAGAAGCTTCCCATAATAAAAGCGCGGGTTTTCATTTCCAGAAAGGGACACCTCATCTCTaGATATCTTTCGCGGAGATA +
Preference number: 5 (lower is better)
Translates to: NAVQEASHNKSAGFHFQKGTPHL*ISFAEI
Trigger: TATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCC...TTTCTGGAAATGAAAACCCGCGCTTTTATTATGGGAAGCTTCTTGAACTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGATGCCATTGTACACTTaGCTTGCAGGACTGAAGATC +
Preference number: 5 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTMPLYT*LAGLKI
Trigger: GATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTTTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: NPLGTPHLLISFAEIMFGFSKMP*YTLLAG
Trigger: TCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAA...ACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCAAAAGTGTGTAAACAATaGCCTGAATCCCCATATCCC +
Preference number: 5 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPKVCKQ*PESPYP
Trigger: GGGATATGGGGATTCAGGCAATTGTTTACACACTTT...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TTCCACTATGGCATCCGGCCTGGAAAGCCCCAATGGAGTTACATTCCTAAAATTAATGAGTGTCTGAAATaGAGCACAAACAATGCACAT +
Preference number: 5 (lower is better)
Translates to: FHYGIRPGKPQWSYIPKINECLK*STNNAH
Trigger: ATGTGCATTGTTTGTGCTCAATTTCAGACACTCATT...AATTTTAGGAATGTAACTCCATTGGGGCTTTCCAGGCCGGATGCCATAGTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467087.7
CDS-3UTR CAA 90 bp TCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTAGGTCCTTGTCTCACTaGTCTTGGCAGCTCATGTTA +
Preference number: 5 (lower is better)
Translates to: SKMPLYTLLAGLKIILLVRSLSH*SWQLML
Trigger: TAACATGAGCTGCCAAGACAAGTGAGACAAGGACCT...AACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS GCA 90 bp ATGAGAACTGAACGTTCCATCAATGCAGGAAGTTTTATTAGACAGTaGAGCTCTCGAGTTTTCCTTCTGATTTCCAGAAACCACACAAGA +
Preference number: 5 (lower is better)
Translates to: MRTERSINAGSFIRQ*SSRVFLLISRNHTR
Trigger: TCTTGTGTGGTTTCTGGAAATCAGAAGGAAAACTCGAGAGCTGCACTGTCTAATAAAACTTCCTGCATTGATGGAACGTTCAGTTCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS-3UTR CAA 90 bp AATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCGGAAGTGTCGTTCCTTaGACATTGTTGTCTCTAAAA +
Preference number: 5 (lower is better)
Translates to: NFCKPMLAYESIKACKSIGSVVP*TLLSLK
Trigger: TTTTAGAGACAACAATGTCAAAGGAACGACACTTCC...GATGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTTTACAGATGCCACTTGAACATGATTCCATCAAGTCAGCCAGTTCACTTAGATTTGCTTCCAGAATTTaGTGGTCTACCTCATCTAGG +
Preference number: 5 (lower is better)
Translates to: SLQMPLEHDSIKSASSLRFASRI*WSTSSR
Trigger: CCTAGATGAGGTAGACCACAAAATTCTGGAAGCAAA...TCTAAGTGAACTGGCTGACTTGATGGAATCATGTTCAAGTGGCATCTGTAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGCAGAGAGAGCTTTCTTaGCTTCCAGAATTTTGTGGT +
Preference number: 5 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTQRELS*LPEFCG
Trigger: ACCACAAAATTCTGGAAGCAAAGAAAGCTCTCTCTG...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGGTTCTCGTAAACAAGTaGTCAACTCAGAGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQVLVNK*STQREL
Trigger: AAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAAC...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGGTTCTCGTAAACAAGTaGTCAACTCAGAGAGAGCTT +
Preference number: 5 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTVLVNK*STQREL
Trigger: AAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAAC...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp ATATCTTTCGCGGAGATAATGTTTGGTATATCTCGAGGCTTAAAGGAGGAGACTGATCTTCTCAATTTGTaGCCAGCGAAAAAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: ISFAEIMFGISRGLKEETDLLNL*PAKKSF
Trigger: GAACGACTTTTTCGCTGGCAACAAATTGAGAAGATC...AGTCTCCTCCTTTAAGCCTCGAGATATACCAAACATTATCTCCGCGAAAGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGATGCCATTGTACACTTaGCTTGCAGGACTGAAGATC +
Preference number: 5 (lower is better)
Translates to: YIATKQQDSLHSSPENIVMPLYT*LAGLKI
Trigger: GATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCAT...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR CAA 90 bp ATAAGAAGATGCTCTGGTAAACAAGAAATTTTTGCAAGCCCATGCTGGCTTACGTTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: IRRCSGKQEIFASPCWLTFSKMP*YTLLAG
Trigger: TCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAA...CGTAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTACCAGAGCATCTTCTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTTCTCCAAAATGCCATaGTACACTTTGCTTGCAGGA +
Preference number: 5 (lower is better)
Translates to: VHRGFQQNVAYTSLRTKQFSKMP*YTLLAG
Trigger: TCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAA...CTGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CATGCTACAGGATTTCTCCAAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGTAAACAAGAAATTTTaGCAAGCCCATGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: HATGFLQNAIVHFACRTEVNKKF*QAHAGL
Trigger: TAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTAC...TTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTTGGAGAAATCCTGTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTGGAGGGTGGGGGATAATAGTTTACAGATGCCACTTGAACATGATTCCATCATCTTTACAGCGGGACTaGAAACTTCACAATAGTAAA +
Preference number: 5 (lower is better)
Translates to: SGGWGIIVYRCHLNMIPSSLQRD*KLHNSK
Trigger: TTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGA...TGATGGAATCATGTTCAAGTGGCATCTGTAAACTATTATCCCCCACCCTCCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp TCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTATATCCCCAAGGTGAATACATaGCTTTTCAGCAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: SRDTSSLDIFRGDNVWYIPKVNT*LFSREV
Trigger: TACTTCTCTGCTGAAAAGCAATGTATTCACCTTGGG...GATATACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS-3UTR CAA 90 bp GCTTTTTGCTTTTCTCTCCATTATGACAAAGGTCATGTGGGATGCTGCTTATTCGTCAGTAAAGGCATCTaGCTGGTGACTATGATCATA +
Preference number: 5 (lower is better)
Translates to: AFCFSLHYDKGHVGCCLFVSKGI*LVTMII
Trigger: TATGATCATAGTCACCAGCAAGATGCCTTTACTGAC...GAATAAGCAGCATCCCACATGACCTTTGTCATAATGGAGAGAAAAGCAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS CCA 90 bp TCTTTTAAAGATAGGGAGGGTATTGACATTGAGAGTGTATTGGACTaGAGTTTTAAGTGTTTATTCCTCTCACTACTGGAACCGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SFKDREGIDIESVLD*SFKCLFLSLLEPER
Trigger: CCTTTCCGGTTCCAGTAGTGAGAGGAATAAACACTTAAAACTCCAGTCCAATACACTCTCAATGTCAATACCCTCCCTATCTTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS-3UTR CAA 90 bp TATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCCAGAAAACATAGTGTTTGCTTCCAGAATTTaGTGGTCTACCTCATCTAGG +
Preference number: 5 (lower is better)
Translates to: YIATKQQDSLHSSPENIVFASRI*WSTSSR
Trigger: CCTAGATGAGGTAGACCACAAAATTCTGGAAGCAAA...CACTATGTTTTCTGGAGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS-3UTR CAA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCATCTTTACAGCGGGACTaGAAACTTCACAATAGTAAA +
Preference number: 5 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPSLQRD*KLHNSK
Trigger: TTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGA...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCATTTCAACTCTTCCACTaGCATAAGGAATCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPSWLSTKCCIYITENKAFQLFH*HKESRA
Trigger: GGCTCTTGATTCCTTATGCAAGTGGAAGAGTTGAAA...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAAAAGTGTGTAAACAATaGCCTGAATCCCCATATCCC +
Preference number: 5 (lower is better)
Translates to: SPSWLSTKCCIYITENKAKVCKQ*PESPYP
Trigger: GGGATATGGGGATTCAGGCAATTGTTTACACACTTT...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AATCCTCTAGGGACACCTCATCTCTTGATATCTTTCGCGGAGATAATGTTTGGTCAAACCGTAAATCCTTaGCAGTTATTCAAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: NPLGTPHLLISFAEIMFGQTVNP*QLFKVC
Trigger: ACACACTTTGAATAACTGCAAAGGATTTACGGTTTG...ACCAAACATTATCTCCGCGAAAGATATCAAGAGATGAGGTGTCCCTAGAGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000477474.3
CDS-3UTR CAA 90 bp AAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTCTCCCTTGTGTTCCATaGCTTTTCAGCAGAGAAGTA +
Preference number: 5 (lower is better)
Translates to: KMPLYTLLAGLKIILLVSLPCVP*LFSREV
Trigger: TACTTCTCTGCTGAAAAGCAATGGAACACAAGGGAG...AGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS-3UTR CAA 90 bp GAAATTTTTGCAAGCCCATGCTGGCTTACGAGTCCATTAAAGCTTGTAAGTCCACTCAGAAATCAATCATaGATAGAGGCATTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: EIFASPCWLTSPLKLVSPLRNQS*IEAFLQ
Trigger: TTGCAGAAATGCCTCTATCAATGATTGATTTCTGAG...TGGACTTACAAGCTTTAATGGACTCGTAAGCCAGCATGGGCTTGCAAAAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS CCA 90 bp TTTCTTCTTTTAAAGATAGGGAGGGTATTGACATTGAGAGTGTATTaGACTGGAGTTTTAAGTGTTTATTCCTCTCACTACTGGAACCGG +
Preference number: 5 (lower is better)
Translates to: FLLLKIGRVLTLRVY*TGVLSVYSSHYWNR
Trigger: CCGGTTCCAGTAGTGAGAGGAATAAACACTTAAAACTCCAGTCCAATACACTCTCAATGTCAATACCCTCCCTATCTTTAAAAGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS-3UTR CAA 90 bp AAAATGCCATTGTACACTTTGCTTGCAGGACTGAAGATCATACTCTTAGTTTCTTTTGCTTCCAGAATTTaGTGGTCTACCTCATCTAGG +
Preference number: 5 (lower is better)
Translates to: KMPLYTLLAGLKIILLVSFASRI*WSTSSR
Trigger: CCTAGATGAGGTAGACCACAAAATTCTGGAAGCAAA...AGAAACTAAGAGTATGATCTTCAGTCCTGCAAGCAAAGTGTACAATGGCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467011.6
ENST00000473519.5
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 5 (lower is better)
Translates to: SPSWLSTKCCIYITENKAVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AAGCTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGGTTTACAGATGCCACTaGAACATGATTCCATCAAGT +
Preference number: 5 (lower is better)
Translates to: KLVSPSWLSTKCCIYITEVYRCH*NMIPSS
Trigger: ACTTGATGGAATCATGTTCAAGTGGCATCTGTAAAC...CTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAAGCAGTCGTTCCTTTGACATaGTTGTCTCTAAAATTCTTC +
Preference number: 5 (lower is better)
Translates to: SPSWLSTKCCIYITENKAVVPLT*LSLKFF
Trigger: GAAGAATTTTAGAGACAACAATGTCAAAGGAACGAC...TGCTTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGAGTAAACAAGAAATTTTaGCAAGCCCATGCTGGCTTA +
Preference number: 5 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRVNKKF*QAHAGL
Trigger: TAAGCCAGCATGGGCTTGCAAAAATTTCTTGTTTAC...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CTTGTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACTCTTTACAGCGGGACTaGAAACTTCACAATAGTAAA +
Preference number: 5 (lower is better)
Translates to: LVSPSWLSTKCCIYITENSLQRD*KLHNSK
Trigger: TTTACTATTGTGAAGTTTCAAGTCCCGCTGTAAAGA...GTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAACCATTTGTTTATGTATaGTTTGAAGAGCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: VSPSWLSTKCCIYITENKPFVYV*FEELPD
Trigger: GTCTGGAAGCTCTTCAAACAATACATAAACAAATGG...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp CAGTCCCCTATCCATAGTCATTTTATAAACTCTATACAGTTTCACTTGCAGAGACCATTTGTTTATGTATaGTTTGAAGAGCTTCCAGAC +
Preference number: 5 (lower is better)
Translates to: QSPIHSHFINSIQFHLQRPFVYV*FEELPD
Trigger: GTCTGGAAGCTCTTCAAACAATACATAAACAAATGG...TCTCTGCAAGTGAAACTGTATAGAGTTTATAAAATGACTATGGATAGGGGACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp GTAAGTCCATCGTGGCTTTCAACAAAATGTTGCATATACATCACTGAGAACAAACAAACCGTAAATCCTTaGCAGTTATTCAAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: VSPSWLSTKCCIYITENKQTVNP*QLFKVC
Trigger: ACACACTTTGAATAACTGCAAAGGATTTACGGTTTG...TTTGTTCTCAGTGATGTATATGCAACATTTTGTTGAAAGCCACGATGGACTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
CDS-3UTR CAA 90 bp AACATCACTATTTCTTATATTGCAACTAAGCAACAAGACAGCTTACACAGCTCTCAAACCGTAAATCCTTaGCAGTTATTCAAAGTGTGT +
Preference number: 5 (lower is better)
Translates to: NITISYIATKQQDSLHSSQTVNP*QLFKVC
Trigger: ACACACTTTGAATAACTGCAAAGGATTTACGGTTTG...AGAGCTGTGTAAGCTGTCTTGTTGCTTAGTTGCAATATAAGAAATAGTGATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467011.6
ENST00000467087.7
CDS GCA 72 bp GTTGCGGCAGAGCCAGTCGCCCGCCGCCCGCGGAGGTaGCGGGGCACAAGCTCGCATCCGTCCGCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: VAAEPVARRPRR*RGTSSHPSAAP
Trigger: CGGAGCGGCGGACGGATGCGAGCTTGTGCCCCGGCACCTCCGCGGGCGGCGGGCGACTGGCTCTGCCGCAAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS GCA 72 bp CCTGCCGGCTTCCCCCAGGTGCGCGAGTTCTCAAGCTaGTGGGTTCCGGGACGCCGCGCGCCGCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: PAGFPQVREFSS*WVPGRRAPLPA
Trigger: GGCGGGCAGCGGCGCGCGGCGTCCCGGAACCCAGCAGCTTGAGAACTCGCGCACCTGGGGGAAGCCGGCAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS GCA 72 bp GCGTCTTCAGGCGGTGCACGACACCCGCGCTGCTGCTaGGGCGAGACCGGGATCCGCTGCTCTGGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: ASSGGARHPRCC*GETGIRCSGAA
Trigger: GGCGGCGCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS CCA 72 bp GCGCTGCTGCTGCGGCGAGACCGGGATCCGCTGCTCTaGCGCCGCCAAACACCAACCCCAGCTCCCGCGCCG +
Preference number: 6 (lower is better)
Translates to: ALLLRRDRDPLL*RRQTPTPAPAP
Trigger: CGGCGCGGGAGCTGGGGTTGGTGTTTGGCGGCGCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS GCA 72 bp CACCCGCGCTGCTGCTGCGGCGAGACCGGGATCCGCTaGTCTGGCGCCGCCAAACACCAACCCCAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: HPRCCCGETGIR*SGAAKHQPQLP
Trigger: CGGGAGCTGGGGTTGGTGTTTGGCGGCGCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS GCA 72 bp ACGGCGTCTTCAGGCGGTGCACGACACCCGCGCTGCTaGTGCGGCGAGACCGGGATCCGCTGCTCTGGCGCC +
Preference number: 6 (lower is better)
Translates to: TASSGGARHPRC*CGETGIRCSGA
Trigger: GGCGCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS GCA 72 bp GGTACGGCGTCTTCAGGCGGTGCACGACACCCGCGCTaGTGCTGCGGCGAGACCGGGATCCGCTGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: GTASSGGARHPR*CCGETGIRCSG
Trigger: GCCAGAGCAGCGGATCCCGGTCTCGCCGCAGCAGCAGCGCGGGTGTCGTGCACCGCCTGAAGACGCCGTACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467011.6
CDS GCA 72 bp AGGCAAACCCGCTGCCTCCTGCCGGCTTCCCCCAGGTaGGCGAGTTCTCAAGCTGCTGGGTTCCGGGACGCC +
Preference number: 6 (lower is better)
Translates to: RQTRCLLPASPR*ASSQAAGFRDA
Trigger: GGCGTCCCGGAACCCAGCAGCTTGAGAACTCGCGCACCTGGGGGAAGCCGGCAGGAGGCAGCGGGTTTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS CAA 72 bp GGAAAGCCCTTGCGCGGAGCCCGGCACACAGGTGCGTaGCCATCCCTTGGGGAGAACTGGCTCTGGGCGTGC +
Preference number: 6 (lower is better)
Translates to: GKPLRGARHTGA*PSLGENWLWAC
Trigger: GCACGCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGCAAGGGCTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS GCA 72 bp GAAAGCCCTTGCGCGGAGCCCGGCACACAGGTGCGTTaGCATCCCTTGGGGAGAACTGGCTCTGGGCGTGCA +
Preference number: 6 (lower is better)
Translates to: ESPCAEPGTQVR*HPLGRTGSGRA
Trigger: TGCACGCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGCAAGGGCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS GCA 72 bp ACAGGGAAAGCCCTTGCGCGGAGCCCGGCACACAGGTaGGTTGCCATCCCTTGGGGAGAACTGGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: TGKALARSPAHR*VAIPWGELALG
Trigger: GCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGCAAGGGCTTTCCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS GCA 72 bp GCTGAGCTCGCTGAGGCTGAGGCGAGGACGGCACAATaGTGCGGCGTGAACGGCACAGGCTGCTGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: AELAEAEARTAQ*CGVNGTGCCFW
Trigger: CCAGAAGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGCCTCAGCCTCAGCGAGCTCAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS GCA 72 bp GAGCTCGCTGAGGCTGAGGCGAGGACGGCACAATGCTaGGGCGTGAACGGCACAGGCTGCTGCTTCTGGCTA +
Preference number: 6 (lower is better)
Translates to: ELAEAEARTAQC*GVNGTGCCFWL
Trigger: TAGCCAGAAGCAGCAGCCTGTGCCGTTCACGCCGCAGCATTGTGCCGTCCTCGCCTCAGCCTCAGCGAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS CCA 72 bp GCGCGGAGCCCGGCACACAGGTGCGTTGCCATCCCTTaGGGAGAACTGGCTCTGGGCGTGCATTCTAAGCGT +
Preference number: 6 (lower is better)
Translates to: ARSPAHRCVAIP*GELALGVHSKR
Trigger: ACGCTTAGAATGCACGCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS TCA 72 bp CCGCATTGCTCAGCTTGGAAGATCGGAGAGCCCGACTaGAGGGAGGGGAATCAGTGCCGTCGAGAGGCTCGG +
Preference number: 6 (lower is better)
Translates to: PHCSAWKIGEPD*REGNQCRREAR
Trigger: CCGAGCCTCTCGACGGCACTGATTCCCCTCCCTTCAGTCGGGCTCTCCGATCTTCCAAGCTGAGCAATGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 72 bp TGGGCAGCATTGAGCTCTAGAATCAGGCAAACCCGCTaGCTCCTGCCGGCTTCCCCCAGGTGCGCGAGTTCT +
Preference number: 6 (lower is better)
Translates to: WAALSSRIRQTR*LLPASPRCASS
Trigger: AGAACTCGCGCACCTGGGGGAAGCCGGCAGGAGGCAGCGGGTTTGCCTGATTCTAGAGCTCAATGCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS CAA 90 bp AATAAACAGGGAAAGCCCTTGCGCGGAGCCCGGCACACAGGTGCGTaGCCATCCCTTGGGGAGAACTGGCTCTGGGCGTGCATTCTAAGC +
Preference number: 6 (lower is better)
Translates to: NKQGKPLRGARHTGA*PSLGENWLWACILS
Trigger: GCTTAGAATGCACGCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCGGGCTCCGCGCAAGGGCTTTCCCTGTTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS CAA 90 bp GGCCGTGTACATGTGGTCCCTGGCTGTCTCCAACTGCACACTCCCTaGTGTTCCTGTAACATGCCAACCTCGAGACCCCTCAGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GRVHVVPGCLQLHTP*CSCNMPTSRPLRAL
Trigger: CAGGGCCCTGAGGGGTCTCGAGGTTGGCATGTTACAGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS CCA 72 bp CGGCACACAGGTGCGTTGCCATCCCTTGGGGAGAACTaGCTCTGGGCGTGCATTCTAAGCGTGTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: RHTGALPSLGEN*LWACILSVFLA
Trigger: AGCCAAGAACACGCTTAGAATGCACGCCCAGAGCCAGTTCTCCCCAAGGGATGGCAACGCACCTGTGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463501.5
CDS CAA 90 bp CTGGCACTTCTGCAGCACGAAAGAGAAACCACCGCATTGCTCAGCTaGGAAGATCGGAGAGCCCGACTGAAGGGAGGGGAATCAGTGCCG +
Preference number: 6 (lower is better)
Translates to: LALLQHERETTALLS*EDRRARLKGGESVP
Trigger: CGGCACTGATTCCCCTCCCTTCAGTCGGGCTCTCCGATCTTCCAAGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 72 bp GTCTCCAACTGCACACTCCCTTGTGTTCCTGTAACATaGCAACCTCGAGACCCCTCAGGGCCCTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: VSNCTLPCVPVT*QPRDPSGPCIC
Trigger: GCAAATGCAGGGCCCTGAGGGGTCTCGAGGTTGGCATGTTACAGGAACACAAGGGAGTGTGCAGTTGGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS CAA 72 bp CTGCAGCACGAAAGAGAAACCACCGCATTGCTCAGCTaGGAAGATCGGAGAGCCCGACTGAAGGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: LQHERETTALLS*EDRRARLKGGE
Trigger: TTCCCCTCCCTTCAGTCGGGCTCTCCGATCTTCCAAGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CAA 72 bp CATGTGGTCCCTGGCTGTCTCCAACTGCACACTCCCTaGTGTTCCTGTAACATGCCAACCTCGAGACCCCTC +
Preference number: 6 (lower is better)
Translates to: HVVPGCLQLHTP*CSCNMPTSRPL
Trigger: GAGGGGTCTCGAGGTTGGCATGTTACAGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS CAA 90 bp ATATCCCTGCTGGCACTTCTGCAGCACGAAAGAGAAACCACCGCATaGCTCAGCTTGGAAGATCGGAGAGCCCGACTGAAGGGAGGGGAA +
Preference number: 6 (lower is better)
Translates to: ISLLALLQHERETTA*LSLEDRRARLKGGE
Trigger: TTCCCCTCCCTTCAGTCGGGCTCTCCGATCTTCCAAGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 72 bp CAGGCCGTGTACATGTGGTCCCTGGCTGTCTCCAACTaGACACTCCCTTGTGTTCCTGTAACATGCCAACCT +
Preference number: 6 (lower is better)
Translates to: QAVYMWSLAVSN*TLPCVPVTCQP
Trigger: AGGTTGGCATGTTACAGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS CAA 72 bp CTGGCACTTCTGCAGCACGAAAGAGAAACCACCGCATaGCTCAGCTTGGAAGATCGGAGAGCCCGACTGAAG +
Preference number: 6 (lower is better)
Translates to: LALLQHERETTA*LSLEDRRARLK
Trigger: CTTCAGTCGGGCTCTCCGATCTTCCAAGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 72 bp GGTGGCACCTTGTTGCTATATCCCTGCTGGCACTTCTaGAGCACGAAAGAGAAACCACCGCATTGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: GGTLLLYPCWHF*STKEKPPHCSA
Trigger: AGCTGAGCAATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 72 bp GGTGAGGGCTCTCTTGCTTTACAGGTGGCACCTTGTTaGTATATCCCTGCTGGCACTTCTGCAGCACGAAAG +
Preference number: 6 (lower is better)
Translates to: GEGSLALQVAPC*YIPAGTSAARK
Trigger: CTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCAAGAGAGCCCTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS GCA 72 bp CAGGCCGTGTACATGTGGTCCCTGGCTGTCTCCAACTaGACACTCCCTTGTGTTCCATTGCTTTTCAGCAGA +
Preference number: 6 (lower is better)
Translates to: QAVYMWSLAVSN*TLPCVPLLFSR
Trigger: TCTGCTGAAAAGCAATGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS GCA 72 bp ACATGCCAACCTCGAGACCCCTCAGGGCCCTGCATTTaGTGTTCCCTCTGCTTGGTGTTATCTACTCTCCAT +
Preference number: 6 (lower is better)
Translates to: TCQPRDPSGPCI*CSLCLVLSTLH
Trigger: ATGGAGAGTAGATAACACCAAGCAGAGGGAACAGCAAATGCAGGGCCCTGAGGGGTCTCGAGGTTGGCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS CCA 72 bp AAAGTCCTTGTCAAAGCGTACCAGGCCGTGTACATGTaGTCCCTGGCTGTCTCCAACTGCACACTCCCTTGT +
Preference number: 6 (lower is better)
Translates to: KVLVKAYQAVYM*SLAVSNCTLPC
Trigger: ACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCCTGGTACGCTTTGACAAGGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473519.5
ENST00000504511.1
CDS CAA 90 bp GGCCGTGTACATGTGGTCCCTGGCTGTCTCCAACTGCACACTCCCTaGTGTTCCATTGCTTTTCAGCAGAGAAGTAAATGGCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: GRVHVVPGCLQLHTP*CSIAFQQRSKWPLP
Trigger: AGGAAGAGGCCATTTACTTCTCTGCTGAAAAGCAATGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATGTACACGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS CAA 90 bp CTATTGGGGGTGTGTCTTCATCTAAGTCATCAACTCCTCCAGCAATaGGATAGGGTGGAATGGAGACTCTGGGCATCACCACCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: LLGVCLHLSHQLLQQ*DRVEWRLWASPPSC
Trigger: ACAGCTGGGTGGTGATGCCCAGAGTCTCCATTCCACCCTATCCAATTGCTGGAGGAGTTGATGACTTAGATGAAGACACACCCCCAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS GCA 72 bp TCTTGCTTTACAGGTGGCACCTTGTTGCTATATCCCTaGTGGCACTTCTGCAGCACGAAAGAGAAACCACCG +
Preference number: 6 (lower is better)
Translates to: SCFTGGTLLLYP*WHFCSTKEKPP
Trigger: CGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CCA 72 bp TGCTTTACAGGTGGCACCTTGTTGCTATATCCCTGCTaGCACTTCTGCAGCACGAAAGAGAAACCACCGCAT +
Preference number: 6 (lower is better)
Translates to: CFTGGTLLLYPC*HFCSTKEKPPH
Trigger: ATGCGGTGGTTTCTCTTTCGTGCTGCAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CCA 72 bp ATTCAGTGTCTGGTGAGGGCTCTCTTGCTTTACAGGTaGCACCTTGTTGCTATATCCCTGCTGGCACTTCTG +
Preference number: 6 (lower is better)
Translates to: IQCLVRALLLYR*HLVAISLLALL
Trigger: CAGAAGTGCCAGCAGGGATATAGCAACAAGGTGCCACCTGTAAAGCAAGAGAGCCCTCACCAGACACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CAA 90 bp AAATGGCCTCTTCCTCCTCTTCATTTCGATAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTGGATCAGGGGAAGGCAAGGAGTGTG +
Preference number: 6 (lower is better)
Translates to: KWPLPPLHFDKAQGN*TLRGYLDQGKARSV
Trigger: CACACTCCTTGCCTTCCCCTGATCCAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTTATCGAAATGAAGAGGAGGAAGAGGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS TCA 72 bp AAATCTGTCTTCTTCTGTAAAGCATGGTGGACTCAGTaGCATGCAGGGATCTGTCATGAGCGCCGGGCTATC +
Preference number: 6 (lower is better)
Translates to: KSVFFCKAWWTQ*HAGICHERRAI
Trigger: GATAGCCCGGCGCTCATGACAGATCCCTGCATGTCACTGAGTCCACCATGCTTTACAGAAGAAGACAGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
CDS CCA 72 bp GTGGACTCAGTGACATGCAGGGATAGGTCTAAAGGCTaGGAAGTCCAAGATAAAGGCACCAGCAGATTCAGT +
Preference number: 6 (lower is better)
Translates to: VDSVTCRDRSKG*EVQDKGTSRFS
Trigger: ACTGAATCTGCTGGTGCCTTTATCTTGGACTTCCCAGCCTTTAGACCTATCCCTGCATGTCACTGAGTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS CAA 72 bp CTTCCTCCTCTTCATTTCGATAAAGCGCAGGGCAACTaGACACTGAGAGGATATCTGGATCAGGGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: LPPLHFDKAQGN*TLRGYLDQGKA
Trigger: TGCCTTCCCCTGATCCAGATATCCTCTCAGTGTCAAGTTGCCCTGCGCTTTATCGAAATGAAGAGGAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS CAA 72 bp CATGTGGTCCCTGGCTGTCTCCAACTGCACACTCCCTaGTGTTCCATTGCTTTTCAGCAGAGAAGTAAATGG +
Preference number: 6 (lower is better)
Translates to: HVVPGCLQLHTP*CSIAFQQRSKW
Trigger: CCATTTACTTCTCTGCTGAAAAGCAATGGAACACAAGGGAGTGTGCAGTTGGAGACAGCCAGGGACCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473519.5
CDS CAA 72 bp AGGGTACGCAGGTTACTGCTGCCTGCCCTAACCACCTaGTCTGAAACAGCATTCTCTTTCCTTTTACCTGTC +
Preference number: 6 (lower is better)
Translates to: RVRRLLLPALTT*SETAFSFLLPV
Trigger: GACAGGTAAAAGGAAAGAGAATGCTGTTTCAGACAAGGTGGTTAGGGCAGGCAGCAGTAACCTGCGTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS TCA 72 bp GCCATGCGAACCTGTTCCAATTCCTGTTCTGCATACTaGCGTCTACTCAATTCACATTCAGCTCCCTCCCTT +
Preference number: 6 (lower is better)
Translates to: AMRTCSNSCSAY*RLLNSHSAPSL
Trigger: AAGGGAGGGAGCTGAATGTGAATTGAGTAGACGTCAGTATGCAGAACAGGAATTGGAACAGGTTCGCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS CAA 90 bp TACTTCTCCAGGGTACGCAGGTTACTGCTGCCTGCCCTAACCACCTaGTCTGAAACAGCATTCTCTTTCCTTTTACCTGTCTTTGTTTGC +
Preference number: 6 (lower is better)
Translates to: YFSRVRRLLLPALTT*SETAFSFLLPVFVC
Trigger: GCAAACAAAGACAGGTAAAAGGAAAGAGAATGCTGTTTCAGACAAGGTGGTTAGGGCAGGCAGCAGTAACCTGCGTACCCTGGAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS TCA 72 bp ACTCCGGTCACTGATTTTCAACTGGGAGATCATAAATaGAGGTTCGTGCACTGCTATCCTGGGAAGTGTCGT +
Preference number: 6 (lower is better)
Translates to: TPVTDFQLGDHK*RFVHCYPGKCR
Trigger: ACGACACTTCCCAGGATAGCAGTGCACGAACCTTCATTTATGATCTCCCAGTTGAAAATCAGTGACCGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463501.5
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
ENST00000494628.6
CDS TCA 72 bp AAATCTGTCTTCTTCTGTAAAGCATGGTGGACTCAGTaGCATGCAGGGATAGGTCTAAAGGCTGGGAAGTCC +
Preference number: 6 (lower is better)
Translates to: KSVFFCKAWWTQ*HAGIGLKAGKS
Trigger: GGACTTCCCAGCCTTTAGACCTATCCCTGCATGTCACTGAGTCCACCATGCTTTACAGAAGAAGACAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478049.1
CDS TCA 72 bp ACGCAGGTTACTGCTGCCTGCCCTAACCACCTTGTCTaGAACAGCATTCTCTTTCCTTTTACCTGTCTTTGT +
Preference number: 6 (lower is better)
Translates to: TQVTAACPNHLV*NSILFPFTCLC
Trigger: ACAAAGACAGGTAAAAGGAAAGAGAATGCTGTTTCAGACAAGGTGGTTAGGGCAGGCAGCAGTAACCTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504511.1
CDS CCA 72 bp TGGACTGGAGTTTTAAGTGTTTATTCCTCTCACTACTaGAACCGGAAAGGAACTAGGGATCCGGCAAGCACT +
Preference number: 6 (lower is better)
Translates to: WTGVLSVYSSHY*NRKGTRDPAST
Trigger: AGTGCTTGCCGGATCCCTAGTTCCTTTCCGGTTCCAGTAGTGAGAGGAATAAACACTTAAAACTCCAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS CAA 90 bp GGTTCGTGCACTGCTATCCTGGGAAGTGTCGTTCCTTTGACATTGTaGTCTCTAAAATTCTTCTCATATTGGGGTAGTTCAACAAACTCT +
Preference number: 6 (lower is better)
Translates to: GSCTAILGSVVPLTL*SLKFFSYWGSSTNS
Trigger: AGAGTTTGTTGAACTACCCCAATATGAGAAGAATTTTAGAGACAACAATGTCAAAGGAACGACACTTCCCAGGATAGCAGTGCACGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463501.5
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
ENST00000494628.6
CDS CAA 90 bp GAAGGTTCGTGCACTGCTATCCTGGGAAGTGTCGTTCCTTTGACATaGTTGTCTCTAAAATTCTTCTCATATTGGGGTAGTTCAACAAAC +
Preference number: 6 (lower is better)
Translates to: EGSCTAILGSVVPLT*LSLKFFSYWGSSTN
Trigger: GTTTGTTGAACTACCCCAATATGAGAAGAATTTTAGAGACAACAATGTCAAAGGAACGACACTTCCCAGGATAGCAGTGCACGAACCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463501.5
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
ENST00000494628.6
CDS GCA 72 bp GAACGTTCCATCAATGCAGGAAGTTTTATTAGACAGTaGAGCTCTCGAGTTTTCCTTCTGATTTCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: ERSINAGSFIRQ*SSRVFLLISRN
Trigger: GTTTCTGGAAATCAGAAGGAAAACTCGAGAGCTGCACTGTCTAATAAAACTTCCTGCATTGATGGAACGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS CAA 72 bp TTTGTTGCCAGCGAAAAAGTCGTTCTCGTAAACAAGTaGTCAACTCAGAGAGAGCTTTCTTTGCTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: FVASEKVVLVNK*STQRELSLLPE
Trigger: TTCTGGAAGCAAAGAAAGCTCTCTCTGAGTTGACAACTTGTTTACGAGAACGACTTTTTCGCTGGCAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000473519.5
ENST00000477474.3
CDS CAA 72 bp AAACCACACAAGACCAGTTCTGTCAGTAAAGGCATCTaGCTGGTGACTATGATCATACATTGCTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: KPHKTSSVSKGI*LVTMIIHCFSA
Trigger: TGCTGAAAAGCAATGTATGATCATAGTCACCAGCAAGATGCCTTTACTGACAGAACTGGTCTTGTGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477474.3
CDS CCA 72 bp GATAGGGAGGGTATTGACATTGAGAGTGTATTGGACTaGAGTTTTAAGTGTTTATTCCTCTCACTACTGGAA +
Preference number: 6 (lower is better)
Translates to: DREGIDIESVLD*SFKCLFLSLLE
Trigger: TTCCAGTAGTGAGAGGAATAAACACTTAAAACTCCAGTCCAATACACTCTCAATGTCAATACCCTCCCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS CAA 72 bp ACTGCTATCCTGGGAAGTGTCGTTCCTTTGACATTGTaGTCTCTAAAATTCTTCTCATATTGGGGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: TAILGSVVPLTL*SLKFFSYWGSS
Trigger: TGAACTACCCCAATATGAGAAGAATTTTAGAGACAACAATGTCAAAGGAACGACACTTCCCAGGATAGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000463501.5
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
ENST00000494628.6
CDS CCA 72 bp TTAAAGATAGGGAGGGTATTGACATTGAGAGTGTATTaGACTGGAGTTTTAAGTGTTTATTCCTCTCACTAC +
Preference number: 6 (lower is better)
Translates to: LKIGRVLTLRVY*TGVLSVYSSHY
Trigger: GTAGTGAGAGGAATAAACACTTAAAACTCCAGTCCAATACACTCTCAATGTCAATACCCTCCCTATCTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS CAA 72 bp TTTAAAGATAGGGAGGGTATTGACATTGAGAGTGTATaGGACTGGAGTTTTAAGTGTTTATTCCTCTCACTA +
Preference number: 6 (lower is better)
Translates to: FKDREGIDIESV*DWSFKCLFLSL
Trigger: TAGTGAGAGGAATAAACACTTAAAACTCCAGTCCAATACACTCTCAATGTCAATACCCTCCCTATCTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478425.1
CDS CAA 72 bp CTCTACTTCAATTCCACCATCTTTGTCATCATCCATTaGTTTATGTATTGTTTGAAGAGCTTCCAGACTAAA +
Preference number: 6 (lower is better)
Translates to: LYFNSTIFVIIH*FMYCLKSFQTK
Trigger: TTTAGTCTGGAAGCTCTTCAAACAATACATAAACAAATGGATGATGACAAAGATGGTGGAATTGAAGTAGAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463501.5
ENST00000465503.6
ENST00000467011.6
ENST00000467087.7
ENST00000477474.3
ENST00000478049.1
ENST00000494628.6