RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STIM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167323

Ensembl transcript IDs: ENST00000300737.8, ENST00000524822.5, ENST00000525055.5, ENST00000525403.5, ENST00000526156.1, ENST00000526596.2, ENST00000526771.5, ENST00000527484.5, ENST00000527651.5, ENST00000528656.5, ENST00000530554.5, ENST00000531332.1, ENST00000532610.5, ENST00000532919.5, ENST00000532990.1, ENST00000533343.1, ENST00000533445.1, ENST00000533977.5, ENST00000534707.1, ENST00000616714.4

Found 802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGGGCAGGGCTGTCAGGCAGTTTCTCCACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCA +
Preference number: 1 (lower is better)
Translates to: ARAGLSGSFSTRDPG*TPSISRWLPLEVMA
Trigger: TGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGAAACTGCCTGACAGCCCTGCCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR GCA 90 bp CAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGGAGGTTTGGGGGCCACACGCTGGCG +
Preference number: 1 (lower is better)
Translates to: QPVAAIGSHGIESLV*STAHLRRFGGHTLA
Trigger: CGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 90 bp CTTGGCCAGGGCAGGGCTGTCAGGCAGTTTCTCCACCAGAGACCCTaGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCAT +
Preference number: 1 (lower is better)
Translates to: LGQGRAVRQFLHQRP*VDPLDQPVAAIGSH
Trigger: ATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGAAACTGCCTGACAGCCCTGCCCTGGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 90 bp GGAGAGCCACCAGGTGGGGCTGAGGGGCTCAGCTCCATCAGGCTGTaGGCCTTGTCCAGCCCATGGTTCAGCGCCAGTAATGCCTTCTTG +
Preference number: 1 (lower is better)
Translates to: GEPPGGAEGLSSIRL*ALSSPWFSASNAFL
Trigger: CAAGAAGGCATTACTGGCGCTGAACCATGGGCTGGACAAGGCCCACAGCCTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR TCA 90 bp GGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTaGGAGCCTCGTCTGCAGCACGGCTCATCTGAGGAGGTTTGGGGG +
Preference number: 1 (lower is better)
Translates to: GPPRSAGGCHWKSWH*EPRLQHGSSEEVWG
Trigger: CCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR GCA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCT +
Preference number: 1 (lower is better)
Translates to: AFLPARWGMRVFRLA*RARLSPTGDGVSGS
Trigger: AGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 90 bp CCACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTG +
Preference number: 1 (lower is better)
Translates to: PQPSCQPGGECVCFG*LAGLGCPQLEMVCL
Trigger: CAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR TCA 90 bp GCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTaGCAGCAGCAGCCCATGGTTGGGACGGAGGCAGGGCAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: AEGTATKTCTEVERE*QQQPMVGTEAGQAG
Trigger: GCCTGCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
3UTR CCA 90 bp AGTTTCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTGCAGCA +
Preference number: 1 (lower is better)
Translates to: SFSTRDPGWTPSISR*LPLEVMALRASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGAAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 90 bp CTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTaGGGCTGTGAGAACGGGAAGAATCCAAATGTGGAGAGCCACCAG +
Preference number: 1 (lower is better)
Translates to: LGCPQLEMVCLGLGS*GCENGKNPNVESHQ
Trigger: CTGGTGGCTCTCCACATTTGGATTCTTCCCGTTCTCACAGCCCCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 90 bp ACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTCTCCTaGCCAGGGGAGCCACTTGTCCTGAGCCCTAGGAGTATTGATGCT +
Preference number: 1 (lower is better)
Translates to: TPGLHKSPVSWLWLS*PGEPLVLSPRSIDA
Trigger: AGCATCAATACTCCTAGGGCTCAGGACAAGTGGCTCCCCTGGCCAGGAGAGCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 90 bp TGGCCAGGGGAGCCACTTGTCCTGAGCCCTAGGAGTATTGATGCTTaGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: WPGEPLVLSPRSIDA*GALGQHLLETNPPA
Trigger: TGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCTAGGGCTCAGGACAAGTGGCTCCCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR TCA 90 bp CAAAGATTAGGCCCTAGCCCCAGTCTGGAGCAAACAGAACCACTGTaGGTGGGGTGGAACAGATCTGAGGCACACATGTCAGAAGCTACT +
Preference number: 1 (lower is better)
Translates to: QRLGPSPSLEQTEPL*VGWNRSEAHMSEAT
Trigger: AGTAGCTTCTGACATGTGTGCCTCAGATCTGTTCCACCCCACTCACAGTGGTTCTGTTTGCTCCAGACTGGGGCTAGGGCCTAATCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 90 bp AAGTCTCTGGTGGGTTGTTCTCTGAGAATTGGTTTCACTCCCCCATaGATCCCTGGAGGCCTGAGTGAGATTAGGATGAGGCTCCTTCTG +
Preference number: 1 (lower is better)
Translates to: KSLVGCSLRIGFTPP*IPGGLSEIRMRLLL
Trigger: CAGAAGGAGCCTCATCCTAATCTCACTCAGGCCTCCAGGGATCCATGGGGGAGTGAAACCAATTCTCAGAGAACAACCCACCAGAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR GCA 90 bp AGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATaGTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGG +
Preference number: 1 (lower is better)
Translates to: RKSDCLITYSSGIHS*SNEQMPLPTHSQAW
Trigger: CCAGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 90 bp CTTAAGAGGCTTCTTAAAGATTTTGAGGGGAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTC +
Preference number: 1 (lower is better)
Translates to: LKRLLKDFEGKLLPA*AGVCFLANRAIILL
Trigger: GAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAGCCTCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR CCA 90 bp GCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCCCAACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGG +
Preference number: 2 (lower is better)
Translates to: ARWGMRVFRLACRARLSPTRDPG*TPSISR
Trigger: CCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT...TGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CAA 90 bp CCACCAGGTGGGGCTGAGGGGCTCAGCTCCATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGCGCCAGTAATGCCTTCTTGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PPGGAEGLSSIRLWA*SSPWFSASNAFLAR
Trigger: CCTGGCCAAGAAGGCATTACTGGCGCTGAACCATGGGCTGGACAAGGCCCACAGCCTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR TCA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGCCACCAGGTGGGGCTaGGGGGCTCAGCTCCATCAG +
Preference number: 2 (lower is better)
Translates to: HSLLASQVGNACVSAGLQATRWG*GAQLHQ
Trigger: CTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGC...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CAA 90 bp ACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGAGCCTCGTCTGCAGCACGGCTCATC +
Preference number: 2 (lower is better)
Translates to: TRDPGWTPSISRWLP*EVMALRASSAARLI
Trigger: GATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR TCA 90 bp GAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACA +
Preference number: 2 (lower is better)
Translates to: ECVCFGWLAGLGCPQLEMAARLI*GGLGAT
Trigger: TGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGC...CATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTTGGTGTGTCTGGGTCTaGGGAGCTGGGGCTGTGAGA +
Preference number: 2 (lower is better)
Translates to: AFLPARWGMRVFRLACRAWCVWV*GAGAVR
Trigger: TCTCACAGCCCCAGCTCCCCAGACCCAGACACACCA...AGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR GCA 90 bp GCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGG +
Preference number: 2 (lower is better)
Translates to: ACRARLSPTGDGVSGSGEIESLV*STAHLR
Trigger: CCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAAT...CTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR GCA 90 bp CGGCCTGGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCA +
Preference number: 2 (lower is better)
Translates to: RPGLESVSSPIEPLSSSAVFRLA*RARLSP
Trigger: TGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACAC...GGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCCAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR GCA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGATCAGCCGGTGGCTaGCATTGGAAGTCATGGCAT +
Preference number: 2 (lower is better)
Translates to: AFLPARWGMRVFRLACRARSAGG*HWKSWH
Trigger: ATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG...AGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: SWELREQQLRHALKWRGSAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
3UTR-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGGACAGCAGCAGCCCATaGTTGGGACGGAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWDSSSP*LGRRQG
Trigger: GCCCTGCCTCCGTCCCAACCATGGGCTGCTGCTGTC...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGCCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATG +
Preference number: 2 (lower is better)
Translates to: HSLLASQVGNACVSAGLQPSISR*LPLEVM
Trigger: CATGACTTCCAATGGCAGCCACCGGCTGATCGAGGG...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGACAGCAGCAGCCCATaGTTGGGACGGAGGCAGGGC +
Preference number: 2 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPDSSSP*LGRRQG
Trigger: GCCCTGCCTCCGTCCCAACCATGGGCTGCTGCTGTC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTGGCTGTGGCTCTCCTaGCCAGGGGAGCCACTTGTC +
Preference number: 2 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATWLWLS*PGEPLV
Trigger: GACAAGTGGCTCCCCTGGCCAGGAGAGCCACAGCCA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCTGGAGATGGTGTGTCTaGGTCTGGGGAGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: GLESVSSPIEPLSSSATAWRWCV*VWGAGA
Trigger: AGCCCCAGCTCCCCAGACCCAGACACACCATCTCCA...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR TCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGAGCAGAGACAGAAGCTaGACCCCAGAGGTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGSRDRS*TPEVEL
Trigger: CAGCTCCACCTCTGGGGTTCAGCTTCTGTCTCTGCT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGAGCAGAGACAGAAGCTaGACCCCAGAGGTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQSRDRS*TPEVEL
Trigger: CAGCTCCACCTCTGGGGTTCAGCTTCTGTCTCTGCT...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGGCAGGTATGTACAGTaGCCAGACCCCTGGACCAGC +
Preference number: 2 (lower is better)
Translates to: GEWWEGGARKQETETRNQGRYVQ*PDPWTS
Trigger: GCTGGTCCAGGGGTCTGGGCACTGTACATACCTGCC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAACCCCAGAGGTGGAGCTaGGAGCTGAGGGAACAGCAA +
Preference number: 2 (lower is better)
Translates to: GEWWEGGARKQETETRNQPQRWS*ELREQQ
Trigger: TTGCTGTTCCCTCAGCTCCCAGCTCCACCTCTGGGG...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGGTTTCACTCCCCCATaGATCCCTGGAGGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGGFTPP*IPGGLS
Trigger: ACTCAGGCCTCCAGGGATCCATGGGGGAGTGAAACC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CAA 90 bp GAGCCACTTGTCCTGAGCCCTAGGAGTATTGATGCTTGGGGAGCTTaGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: EPLVLSPRSIDAWGA*GQHLLETNPPAVWG
Trigger: CCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCTAGGGCTCAGGACAAGTGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGGGGTGGAACAGATCTaGGGCACACATGTCAGAAGC +
Preference number: 2 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGGVEQI*GTHVRS
Trigger: GCTTCTGACATGTGTGCCTCAGATCTGTTCCACCCC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
57% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGGGAGCCACTTGTCCTaGGCCCTAGGAGTATTGATG +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSGSHLS*ALGVLM
Trigger: CATCAATACTCCTAGGGCTCAGGACAAGTGGCTCCC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGGCAGGTATGTACAGTaGCCAGACCCCTGGACCAGC +
Preference number: 2 (lower is better)
Translates to: SWELREQQLRHALKWRGSGRYVQ*PDPWTS
Trigger: GCTGGTCCAGGGGTCTGGGCACTGTACATACCTGCC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
3UTR-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGGCAGGTATGTACAGTaGCCAGACCCCTGGACCAGC +
Preference number: 2 (lower is better)
Translates to: ELREQQLRHALKWRGSDSGRYVQ*PDPWTS
Trigger: GCTGGTCCAGGGGTCTGGGCACTGTACATACCTGCC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
3UTR-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGAGACAAATCCTCCTaGAGTGTGGGGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATRDKSS*SVGEQG
Trigger: CCCCTGCTCCCCCACACTGCAGGAGGATTTGTCTCT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCCCCAGAGGTGGAGCTaGGAGCTGAGGGAACAGCAA +
Preference number: 2 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPPQRWS*ELREQQ
Trigger: TTGCTGTTCCCTCAGCTCCCAGCTCCACCTCTGGGG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGGTTTCACTCCCCCATaGATCCCTGGAGGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGGFTPP*IPGGLS
Trigger: ACTCAGGCCTCCAGGGATCCATGGGGGAGTGAAACC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTGGTTGTGTCCTTTTTaGGCCTCTGGCCAAGGCTAC +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSWLCPF*ASGQGY
Trigger: GTAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGCCCTAGCCCCAGTCTaGAGCAAACAGAACCACTGT +
Preference number: 2 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGALAPV*SKQNHC
Trigger: ACAGTGGTTCTGTTTGCTCCAGACTGGGGCTAGGGC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGCCCTAGCCCCAGTCTaGAGCAAACAGAACCACTGT +
Preference number: 2 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATALAPV*SKQNHC
Trigger: ACAGTGGTTCTGTTTGCTCCAGACTGGGGCTAGGGC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGAGGGAGGCAGGTGTaGGTGGGAGTAGAGAGAAAA +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSRGRQV*VGVERK
Trigger: TTTTCTCTCTACTCCCACCCACACCTGCCTCCCTCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGGAGTATTGATGCTTaGGGAGCTTTGGGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSRSIDA*GALGQH
Trigger: GTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCCAAACAGAACCACTGTaGGTGGGGTGGAACAGATCT +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSQTEPL*VGWNRS
Trigger: AGATCTGTTCCACCCCACTCACAGTGGTTCTGTTTG...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: VERKSDCLITYSSGIHSCAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCAGACATGCACTGAAGTaGAGAGGGAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGRHALK*RGSDSS
Trigger: GCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAGACATGCACTGAAGTaGAGAGGGAGTGACAGCAGC +
Preference number: 2 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGERHALK*RGSDSS
Trigger: GCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCACCCATTCCCAAGCCTaGCCTCTCTTTAAAAGTCTC +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSTHSQA*PLFKSL
Trigger: GAGACTTTTAAAGAGAGGCCAGGCTTGGGAATGGGT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCACAGCAACTAAGACATaGACTGAAGTGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGTATKT*TEVERE
Trigger: CTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCCCCCAGAGGTGGAGCTaGGAGCTGAGGGAACAGCAA +
Preference number: 2 (lower is better)
Translates to: VERKSDCLITYSSGIHSCPQRWS*ELREQQ
Trigger: TTGCTGTTCCCTCAGCTCCCAGCTCCACCTCTGGGG...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGGCTACAAAGTAACATaGAAATGGGATCTAACAAGG +
Preference number: 2 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSGYKVT*KWDLTR
Trigger: CCTTGTTAGATCCCATTTTCATGTTACTTTGTAGCC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTATAACCTACAGTTCTaGCATCCACTCATGCTCCAA +
Preference number: 2 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGYNLQF*HPLMLQ
Trigger: TTGGAGCATGAGTGGATGCCAGAACTGTAGGTTATA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGTAGAGAGAAAAAGTaGCTGCCTTATAACCTACAG +
Preference number: 2 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSREKK*LPYNLQ
Trigger: CTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTACT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGCTGAACCCCAGAGGTaGAGCTGGGAGCTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKAEPQR*SWELRE
Trigger: TTCCCTCAGCTCCCAGCTCCACCTCTGGGGTTCAGC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTGGTGGGTTGTTCTCTaGGAATTGGTTTCACTCCCC +
Preference number: 2 (lower is better)
Translates to: VERKSDCLITYSSGIHSCWWVVL*ELVSLP
Trigger: GGGGAGTGAAACCAATTCTCAGAGAACAACCCACCA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGACAGCAACTAAGACATaGACTGAAGTGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKTATKT*TEVERE
Trigger: CTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 72 bp GGCAGGGCTGTCAGGCAGTTTCTCCACCAGAGACCCTaGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATT +
Preference number: 3 (lower is better)
Translates to: GRAVRQFLHQRP*VDPLDQPVAAI
Trigger: AATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGAAACTGCCTGACAGCCCTGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR GCA 72 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTG +
Preference number: 3 (lower is better)
Translates to: PARWGMRVFRLA*RARLSPTGDGV
Trigger: CACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 72 bp ACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCG +
Preference number: 3 (lower is better)
Translates to: TRDPGWTPSISR*LPLEVMALRAS
Trigger: CGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 72 bp TCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATG +
Preference number: 3 (lower is better)
Translates to: SCQPGGECVCFG*LAGLGCPQLEM
Trigger: CATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR TCA 72 bp GGAAGAATCCAAATGTGGAGAGCCACCAGGTGGGGCTaGGGGGCTCAGCTCCATCAGGCTGTGGGCCTTGTC +
Preference number: 3 (lower is better)
Translates to: GRIQMWRATRWG*GAQLHQAVGLV
Trigger: GACAAGGCCCACAGCCTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGCTCTCCACATTTGGATTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR CAA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGA +
Preference number: 3 (lower is better)
Translates to: AFLPARWGMRVFRLACRASRWLP*EVMALR
Trigger: TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCT...AGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR TCA 72 bp CGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTaGGAGCCTCGTCTGCAGCACGGCTCATCTGAGGAG +
Preference number: 3 (lower is better)
Translates to: RSAGGCHWKSWH*EPRLQHGSSEE
Trigger: CTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR GCA 72 bp GCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGGAGGTTTGGGGGCCAC +
Preference number: 3 (lower is better)
Translates to: AAIGSHGIESLV*STAHLRRFGGH
Trigger: GTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CCA 72 bp CTCCATAAGAGCCCTGTATCATGGCTGTGGCTCTCCTaGCCAGGGGAGCCACTTGTCCTGAGCCCTAGGAGT +
Preference number: 3 (lower is better)
Translates to: LHKSPVSWLWLS*PGEPLVLSPRS
Trigger: ACTCCTAGGGCTCAGGACAAGTGGCTCCCCTGGCCAGGAGAGCCACAGCCATGATACAGGGCTCTTATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CAA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGATGCTTGGGGAGCTTaGGGGCAGCACCTCTTAGAG +
Preference number: 3 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATDAWGA*GQHLLE
Trigger: CTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CAA 90 bp CGGCCTGGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCTTGGAAGTCATGGCATaGAGAGCCTCGTCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: RPGLESVSSPIEPLSSSALEVMA*RASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA...GGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCCAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR TCA 72 bp GGCCCTAGCCCCAGTCTGGAGCAAACAGAACCACTGTaGGTGGGGTGGAACAGATCTGAGGCACACATGTCA +
Preference number: 3 (lower is better)
Translates to: GPSPSLEQTEPL*VGWNRSEAHMS
Trigger: TGACATGTGTGCCTCAGATCTGTTCCACCCCACTCACAGTGGTTCTGTTTGCTCCAGACTGGGGCTAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CAA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCCTGGTTGTGTCCTTTTaGAGCCTCTGGCCAAGGCTA +
Preference number: 3 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSLVVSF*SLWPRL
Trigger: TAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCAG...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 72 bp GTGGGTTGTTCTCTGAGAATTGGTTTCACTCCCCCATaGATCCCTGGAGGCCTGAGTGAGATTAGGATGAGG +
Preference number: 3 (lower is better)
Translates to: VGCSLRIGFTPP*IPGGLSEIRMR
Trigger: CCTCATCCTAATCTCACTCAGGCCTCCAGGGATCCATGGGGGAGTGAAACCAATTCTCAGAGAACAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 72 bp GAGCCACTTGTCCTGAGCCCTAGGAGTATTGATGCTTaGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAAT +
Preference number: 3 (lower is better)
Translates to: EPLVLSPRSIDA*GALGQHLLETN
Trigger: ATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCTAGGGCTCAGGACAAGTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR TCA 72 bp TGGCCTCTCTTTAAAAGTCTCTGGTGGGTTGTTCTCTaGGAATTGGTTTCACTCCCCCATGGATCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: WPLFKSLWWVVL*ELVSLPHGSLE
Trigger: CTCCAGGGATCCATGGGGGAGTGAAACCAATTCTCAGAGAACAACCCACCAGAGACTTTTAAAGAGAGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR TCA 72 bp TATAACCTACAGTTCTGGCATCCACTCATGCTCCAATaGACAGATGCCTCTCCCAACCCATTCCCAAGCCTG +
Preference number: 3 (lower is better)
Translates to: YNLQFWHPLMLQ*TDASPNPFPSL
Trigger: CAGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGCCAGAACTGTAGGTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR GCA 72 bp GACTGCCTTATAACCTACAGTTCTGGCATCCACTCATaGTCCAATGAACAGATGCCTCTCCCAACCCATTCC +
Preference number: 3 (lower is better)
Translates to: DCLITYSSGIHS*SNEQMPLPTHS
Trigger: GGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 72 bp AATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTaGCCTCTCTTTAAAAGTCTCTGGTGGGTTGTTCTC +
Preference number: 3 (lower is better)
Translates to: NEQMPLPTHSQA*PLFKSLWWVVL
Trigger: GAGAACAACCCACCAGAGACTTTTAAAGAGAGGCCAGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR-3UTR CAA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAAAGTCTCTGGTGGGTaGTTCTCTGAGAATTGGTTT +
Preference number: 3 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPKVSGG*FSENWF
Trigger: AAACCAATTCTCAGAGAACAACCCACCAGAGACTTT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
3UTR CCA 72 bp CTTCTTAAAGATTTTGAGGGGAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATT +
Preference number: 3 (lower is better)
Translates to: LLKDFEGKLLPA*AGVCFLANRAI
Trigger: AATGGCTCTATTGGCGAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR-3UTR CAA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAAAGTCTCTGGTGGGTaGTTCTCTGAGAATTGGTTT +
Preference number: 3 (lower is better)
Translates to: VERKSDCLITYSSGIHSCKVSGG*FSENWF
Trigger: AAACCAATTCTCAGAGAACAACCCACCAGAGACTTT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGGTCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: AGLGCPQLEMVCLGLGSWSQAML*LRQALP
Trigger: CGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGA...CCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PARWGMRVFRLACRARLSTRDPG*TPSISR
Trigger: CCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp AGCCTCGTCTGCAGCACGGCTCATCTGAGGAGGTTTGGGGGCCACACGCTGGCGCAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLVCSTAHLRRFGGHTLAQALPQ*CCHLAQ
Trigger: CTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTG...CGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: PARWGMRVFRLACRARLSEGSHQ*VDARVV
Trigger: AACAACCCTGGCATCCACTCACTGGTGGCTGCCCTC...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGCCACCAGGTGGGGCTaGGGGGCTCAGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ECVCFGWLAGLGCPQLEMATRWG*GAQLHQ
Trigger: CTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGC...CATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp TTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGACCTCCACTGTGCGGTaGTCCTCCTGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LPARWGMRVFRLACRARLTSTVR*SSWALC
Trigger: GCACAAGGCCCAGGAGGAGCACCGCACAGTGGAGGT...CAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAGTTGGCCCCCGAGCTaGTTCCTGTCGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWSWPPS*FLSPSH
Trigger: GTGAGAAGGCGACAGGAACCAGCTCGGGGGCCAACT...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp CAGGCAGTTTCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTCCAGGGAAGAGCTGTaGGCCACGTGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: QAVSPPETLGGPPRSAGGSREEL*ATWKVP
Trigger: TGGCACCTTCCACGTGGCCCACAGCTCTTCCCTGGA...GCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGAAACTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCTCATCTGAGGAGGTTTaGGGGCCACACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PARWGMRVFRLACRARLSSSEEV*GPHAGG
Trigger: ACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGA...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCCCGTGCCCAGGCGGCTaGCGGTGCCCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSPCPGG*RCPGPA
Trigger: TGCTGGACCTGGGCACCGCCAGCCGCCTGGGCACGG...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526596.2
3UTR CAA 72 bp GGGGCTGAGGGGCTCAGCTCCATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGCGCCAGTAATGCCTTC +
Preference number: 4 (lower is better)
Translates to: GAEGLSSIRLWA*SSPWFSASNAF
Trigger: GAAGGCATTACTGGCGCTGAACCATGGGCTGGACAAGGCCCACAGCCTGATGGAGCTGAGCCCCTCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGGGCTGCGGCGGCCTaGGCTCGTGCCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGAAAA*ARAASG
Trigger: TCCGGAAGCGGCACGAGCTCAGGCCGCCGCAGCCCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGGGGCTGCGGCGGCCTaGGCTCGTGCCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSGAAAA*ARAASG
Trigger: TCCGGAAGCGGCACGAGCTCAGGCCGCCGCAGCCCC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCGTCGCCTTCTCACTGTaGCTATGGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PARWGMRVFRLACRARLSVAFSL*LWLRLW
Trigger: CCAGAGCCTCAGCCATAGTCACAGTGAGAAGGCGAC...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCCAGGAGCCCGGGAGTaGAGCCGACGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQPGARE*SRRSPG
Trigger: GCCTGGAGACCGTCGGCTGCACTCCCGGGCTCCTGG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAAGGCTCTGGCCCTGGTaGAGGAGGAGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GWTPSISRWLPLEVMALRRLWPW*RRSPQR
Trigger: CCTCTGGGGACTCCTCCTGCACCAGGGCCAGAGCCT...TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp TGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTGCATGGCCACTGAGCTaGAGCTTCCGGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: CQPGGECVCFGWLAGLGCAWPLS*SFRKVS
Trigger: GGAGACCTTCCGGAAGCTGCAGCTCAGTGGCCATGC...ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGGCCTCCCGAACCTaGTCCAACTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWKASRT*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTT...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp CCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PWVDPLDQPVAAIGSHGIALPQC*CHLAQC
Trigger: GCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGC...AATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp TGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGATCTGTTGCCAGCGGTaGAGGCGCTCCCGCAATGCT +
Preference number: 4 (lower is better)
Translates to: CRARLSPTGDGVSGSGELICCQR*RRSRNA
Trigger: AGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGAT...CAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAACCAGGCGGCTGGCGGTaGCCAGGTCCAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQPGGWR*PGPAGG
Trigger: TCCGCCTGCTGGACCTGGGCACCGCCAGCCGCCTGG...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGCGAGCAGCAGAAGCTaGGGAGGGCGTGCGACCCGC +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGASSRS*GGRATR
Trigger: GCGGGTCGCACGCCCTCCCCAGCTTCTGCTGCTCGC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTGAGGCTCTGGCCCTaGTGCAGGAGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VDPLDQPVAAIGSHGIESLRLWP*CRRSPQ
Trigger: CTGGGGACTCCTCCTGCACCAGGGCCAGAGCCTCAG...GCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAGCTCCTTCAGCCGCTaGGCTTCCTGCTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWSSFSR*ASCLAR
Trigger: CCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCT...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGGAGCTGTGGGCCACGTaGAAGGTGCCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWELWAT*KVPKSV
Trigger: CACACTCTTTGGCACCTTCCACGTGGCCCACAGCTC...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGGCCTTGTCCAGCCCATaGTTCAGCGCCAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWALSSP*FSASNA
Trigger: GGCATTACTGGCGCTGAACCATGGGCTGGACAAGGC...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGTGGAGATGGTGTGTCTaGGTCTGGGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: ACRARLSPTGDGVSGSGEWRWCV*VWGAGA
Trigger: AGCCCCAGCTCCCCAGACCCAGACACACCATCTCCA...CTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTTCATGGTGGTGTTGGTaGCAGCCAGCCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: CQPGGECVCFGWLAGLGCSWWCW*QPALAW
Trigger: CCATGCCAAGGCTGGCTGTCACCAACACCACCATGA...ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp CTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGAGCTGCAGCCACTTCTaGAGGGCCTCTGGAGCATAC +
Preference number: 4 (lower is better)
Translates to: LACRARLSPTGDGVSGSGSCSHF*RASGAY
Trigger: GTATGCTCCAGAGGCCCTTCAGAAGTGGCTGCAGCT...CCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGCCACCAGGTGGGGCTaGGGGGCTCAGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSATRWG*GAQLHQ
Trigger: CTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGAAGCTGGGGAGGGCGTaGGACCCGCAGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGKLGRA*DPQGPE
Trigger: CTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCCCAGGAGCCCGGGAGTaGAGCCGACGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATPGARE*SRRSPG
Trigger: GCCTGGAGACCGTCGGCTGCACTCCCGGGCTCCTGG...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAACCAGGAGCCCGGGAGTaGAGCCGACGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQPGARE*SRRSPG
Trigger: GCCTGGAGACCGTCGGCTGCACTCCCGGGCTCCTGG...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTGCGGCTCCGTCAGGCGCTaGCGAACACTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LDQPVAAIGSHGIESLVCGSVRR*RTLLCR
Trigger: CCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCC...GCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ECVCFGWLAGLGCPQLEMVFRLA*RARLSP
Trigger: TGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACAC...CATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCCTCAGGTCCAACAGTaGGTCCGCCGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGPQVQQ*VRRGCG
Trigger: GCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGCCTCAGGTCCAACAGTaGGTCCGCCGGGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWPQVQQ*VRRGCG
Trigger: GCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGG...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTAGCCTTGGCATGGCATaGCCACTGAGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CQPGGECVCFGWLAGLGCSLGMA*PLSCSF
Trigger: GAAGCTGCAGCTCAGTGGCCATGCCATGCCAAGGCT...ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGGGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: AGLGCPQLEMVCLGLGSWAATSE*MPGLLT
Trigger: TGTCAACAACCCTGGCATCCACTCACTGGTGGCTGC...CCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGSQAML*LRQALP
Trigger: CGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGGGAAGAATCCAAATGTaGAGAGCCACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWGRIQM*RATRWG
Trigger: GCCCCACCTGGTGGCTCTCCACATTTGGATTCTTCC...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCTTCTTGCCAGCCAGGTaGGGAATGCGTGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PARWGMRVFRLACRARLSFLPAR*GMRVFR
Trigger: CCGAAACACACGCATTCCCCACCTGGCTGGCAAGAA...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
3UTR CAA 72 bp CCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGAGCCTCGTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGWTPSISRWLP*EVMALRASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCCACTGTGACTATGGCTaGGGCTCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: DPLDQPVAAIGSHGIESLHCDYG*GSGPGA
Trigger: TGCACCAGGGCCAGAGCCTCAGCCATAGTCACAGTG...GAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp CTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTGCGCATGGCATGGCCACTaGGCTGCAGCTTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LDQPVAAIGSHGIESLVCAWHGH*AAASGR
Trigger: CCTTCCGGAAGCTGCAGCTCAGTGGCCATGCCATGC...GCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGGTCAGTCATGATGAAGTaGGCAGGGTTGGGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: AGLGCPQLEMVCLGLGSWSVMMK*AGLGRV
Trigger: TACACGCCCCAACCCTGCTCACTTCATCATGACTGA...CCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGCCACCAGGTGGGGCTaGGGGGCTCAGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGATRWG*GAQLHQ
Trigger: CTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGAAGCTGGGGAGGGCGTaGGACCCGCAGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWKLGRA*DPQGPE
Trigger: CTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTT...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAACACCTGACCTCGCCCTaGCGAAGAGCGGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQHLTSP*RRAASS
Trigger: GCTGCTCGCCGCTCTTCGGCAGGGCGAGGTCAGGTG...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGGCGGCCTGAGCTCGTaGCGCTTCCGGAGACTTCGG +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGGGLSS*RFRRLR
Trigger: CCGAAGTCTCCGGAAGCGGCACGAGCTCAGGCCGCC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGGTCTCCAGGCAAGATaGCCTCGCGGCTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGGLQAR*PRGSAA
Trigger: AGCTGCGGAGCCGCGAGGGCATCTTGCCTGGAGACC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGAGGCTCTGGCCCTGGTaGAGGAGGAGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGRLWPW*RRSPQR
Trigger: CCTCTGGGGACTCCTCCTGCACCAGGGCCAGAGCCT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGTGCCGAACACTGCTCTaGAGGCTAGGGGACTGCATG +
Preference number: 4 (lower is better)
Translates to: LLASQVGNACVSAGLQGSCRTLL*RLGDCM
Trigger: CATGCAGTCCCCTAGCCTGCAGAGCAGTGTTCGGCA...CGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCGAGCAGCAGAAGCTaGGGAGGGCGTGCGACCCGC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSASSRS*GGRATR
Trigger: GCGGGTCGCACGCCCTCCCCAGCTTCTGCTGCTCGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGACTTCGGGCAGGGTaGCTGCGGGGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSRLRAG*LRGCCQ
Trigger: CTGACAGCAGCCCCGCAGCCACCCTGCCCGAAGTCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGGAACATGCGTCTGATGTaGACACCTCGGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGLGCPQLEMVCLGLGSWNMRLM*TPRDPR
Trigger: TCTGGGATCCCGAGGTGTCCACATCAGACGCATGTT...CCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp ACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTGGACTCCTCAGAGTTaGCCCCCGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TPSISRWLPLEVMALRASWTPQS*PPSWFL
Trigger: CAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCA...CGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp CCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTGCAGCACGGCTGGTGACAGCCAGCCTTaGCATGGCATGGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PVAAIGSHGIESLVCSTAGDSQP*HGMATE
Trigger: CTCAGTGGCCATGCCATGCCAAGGCTGGCTGTCACC...AGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQSQAML*LRQALP
Trigger: CGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGA...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSQAML*LRQALP
Trigger: CGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: AFLPARWGMRVFRLACRAPSISR*LPLEVM
Trigger: CATGACTTCCAATGGCAGCCACCGGCTGATCGAGGG...AGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGTRDPG*TPSISR
Trigger: CCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCTGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: DPLDQPVAAIGSHGIESLCVCFG*LAGLGC
Trigger: ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCA...GAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp CCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTTCTTCCGGCCTGGGCTaGAGTCTGTTTCCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: PWVDPLDQPVAAIGSHGISSGLG*SLFPRQ
Trigger: TTGGCGAGGAAACAGACTCCAGCCCAGGCCGGAAGA...AATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGACAGCAGCAGCCCATaGTTGGGACGGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSDSSSP*LGRRQG
Trigger: GCCCTGCCTCCGTCCCAACCATGGGCTGCTGCTGTC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGTCCAGCCCATGGTTCAGCGCCAGTAATGCCTTCTTGGCCAGGGCAGGGCTGTAGCTGGGGTCTATGTTaGGGGCAGCCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CPAHGSAPVMPSWPGQGCSWGLC*GQPPVS
Trigger: ACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCT...ACAGCCCTGCCCTGGCCAAGAAGGCATTACTGGCGCTGAACCATGGGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GLESVSSPIEPLSSSATAAARLI*GGLGAT
Trigger: TGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGC...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGCCACCAGGTGGGGCTaGGGGGCTCAGCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSATRWG*GAQLHQ
Trigger: CTGATGGAGCTGAGCCCCTCAGCCCCACCTGGTGGC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAAGCTGGGGAGGGCGTaGGACCCGCAGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPKLGRA*DPQGPE
Trigger: CTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGCACCTGACCTCGCCCTaGCGAAGAGCGGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEHLTSP*RRAASS
Trigger: GCTGCTCGCCGCTCTTCGGCAGGGCGAGGTCAGGTG...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGGGTGGCTGCGGGGCTaGTGTCAGCTCCGCAGATTA +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSGWLRG*CQLRRL
Trigger: TAATCTGCGGAGCTGACAGCAGCCCCGCAGCCACCC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTGCTCCAAGTTTGGGTaGGGGAGGAGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSCSKFG*GRRAGS
Trigger: GGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGTGCTCCAAGTTTGGGTaGGGGAGGAGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQCSKFG*GRRAGS
Trigger: GGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCA...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGCCACCCGCGAGCCTaGCCCCTCCAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSHPRA*PLQQPK
Trigger: CTTTGGCTGTTGGAGGGGGCAGGCTCGCGGGTGGCT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGGGTCTCCAGGCAAGATaGCCTCGCGGCTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWGLQAR*PRGSAA
Trigger: AGCTGCGGAGCCGCGAGGGCATCTTGCCTGGAGACC...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGGGGCCACGTGGAAGGTaGCAAAGAGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LPARWGMRVFRLACRARLGPRGR*QRVCFS
Trigger: AGAGAAACACACTCTTTGGCACCTTCCACGTGGCCC...CAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSALPQC*CHLAQC
Trigger: GCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGGCTCCGTCAGGCGCTaGCGAACACTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGGSVRR*RTLLCR
Trigger: CCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQVFRLA*RARLSP
Trigger: TGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACAC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGCAGCCAGGTGGGGAATaGGTGTGTTTCGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ECVCFGWLAGLGCPQLEMQPGGE*VCFGWL
Trigger: AAGCCAGCCGAAACACACGCATTCCCCACCTGGCTG...CATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGTGCGGGAGGAGGGCTaGCTCCTCAGGTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQVREEG*LLRSNS
Trigger: ACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCAC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGCTGAGGCTCTGGCCCTaGTGCAGGAGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWLRLWP*CRRSPQ
Trigger: CTGGGGACTCCTCCTGCACCAGGGCCAGAGCCTCAG...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGGTCGTCCATCAGTTTGTaGATGTTACGGACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: AGLGCPQLEMVCLGLGSWSSISL*MLRTAS
Trigger: CGAGGCAGTCCGTAACATCCACAAACTGATGGACGA...CCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGTTGGGGGCCACACGCTaGCGGTCACTCATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQLGATR*RSLMWR
Trigger: CCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAA...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWTRDPG*TPSISR
Trigger: CCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCGGCTGTCCCCAACTaGAGATGGTGTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TPSISRWLPLEVMALRASSAVPN*RWCVWV
Trigger: GACCCAGACACACCATCTCCAGTTGGGGACAGCCGA...CGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPARWGMRVFRLACRARLKLLPA*AGVCFL
Trigger: GAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTT...CAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGCAGCAGCCCATGGTTaGGACGGAGGCAGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSAAAHG*DGGRAG
Trigger: GCCTGCCCTGCCTCCGTCCCAACCATGGGCTGCTGC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCCACTGTGACTATGGCTaGGGCTCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSHCDYG*GSGPGA
Trigger: TGCACCAGGGCCAGAGCCTCAGCCATAGTCACAGTG...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGAAGGTCTCCTCATACTaGGGCAGCTCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: ACRARLSPTGDGVSGSGEKVSSY*GSSTYV
Trigger: CACATATGTGGAGCTGCCTCAGTATGAGGAGACCTT...CTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGCATGGCATGGCCACTaGGCTGCAGCTTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATAWHGH*AAASGR
Trigger: CCTTCCGGAAGCTGCAGCTCAGTGGCCATGCCATGC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATAARLI*GGLGAT
Trigger: TGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGAARLI*GGLGAT
Trigger: TGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGTGGAAGTCATGGCATTaGGAGCCTCGTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HSLLASQVGNACVSAGLQWKSWH*EPRLQH
Trigger: GTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCA...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp CCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTAGAGATGATCCTCTCTaGGATCCCAGGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: PWVDPLDQPVAAIGSHGIRDDPL*DPRPCC
Trigger: ACAGCATGGCCTGGGATCTCAGAGAGGATCATCTCT...AATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGATTACTACACCCCTaGGGAAGGGGGCGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGRLLHP*GRGRPE
Trigger: CTCCGGCCGCCCCCTTCCGCAGGGGTGTAGTAATCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGGGTGGCTGCGGGGCTaGTGTCAGCTCCGCAGATTA +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGGWLRG*CQLRRL
Trigger: TAATCTGCGGAGCTGACAGCAGCCCCGCAGCCACCC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGGGTGGCTGCGGGGCTaGTGTCAGCTCCGCAGATTA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATGWLRG*CQLRRL
Trigger: TAATCTGCGGAGCTGACAGCAGCCCCGCAGCCACCC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAGCCACCCGCGAGCCTaGCCCCTCCAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPSHPRA*PLQQPK
Trigger: CTTTGGCTGTTGGAGGGGGCAGGCTCGCGGGTGGCT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGGTCTCCAGGCAAGATaGCCTCGCGGCTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSGLQAR*PRGSAA
Trigger: AGCTGCGGAGCCGCGAGGGCATCTTGCCTGGAGACC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAGGCTCTGGCCCTGGTaGAGGAGGAGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPRLWPW*RRSPQR
Trigger: CCTCTGGGGACTCCTCCTGCACCAGGGCCAGAGCCT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCAATTCGGCAAAACTCTaGTGCAGTGGACTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PARWGMRVFRLACRARLSNSAKL*CSGLLR
Trigger: TCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGAATT...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp CTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGTGGATGTTACGGACTaGCTCGAAGCTGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LACRARLSPTGDGVSGSGVDVTD*LEAEFL
Trigger: GAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCAC...CCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGCATGGCCACTGAGCTaGAGCTTCCGGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQAWPLS*SFRKVS
Trigger: GGAGACCTTCCGGAAGCTGCAGCTCAGTGGCCATGC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGCATGGCCACTGAGCTaGAGCTTCCGGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSAWPLS*SFRKVS
Trigger: GGAGACCTTCCGGAAGCTGCAGCTCAGTGGCCATGC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCAGGTCATGCAGACTCTaGTCAGCTCGGTGTAACCCC +
Preference number: 4 (lower is better)
Translates to: DPLDQPVAAIGSHGIESLRSCRL*SARCNP
Trigger: GGGGTTACACCGAGCTGAGCAGAGTCTGCATGACCT...GAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCACCTCCACTGTGCGGTaGTCCTCCTGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATTSTVR*SSWALC
Trigger: GCACAAGGCCCAGGAGGAGCACCGCACAGTGGAGGT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAACCTCCACTGTGCGGTaGTCCTCCTGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGTSTVR*SSWALC
Trigger: GCACAAGGCCCAGGAGGAGCACCGCACAGTGGAGGT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTAGCCGCTGGGCTTCCTaGTTAGCAAGGTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: AFLPARWGMRVFRLACRASRWAS*LARLIS
Trigger: TGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCT...AGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGQALPQ*CCHLAQ
Trigger: CTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGQALPQ*CCHLAQ
Trigger: CTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGGTTGGGGCGTGTACTaGCCATCCAGCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGGWGVY*PSSWGL
Trigger: TAGACCCCAGCTGGATGGGCAGTACACGCCCCAACC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCGGTTGGGGCGTGTACTaGCCATCCAGCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: GLESVSSPIEPLSSSATAGWGVY*PSSWGL
Trigger: TAGACCCCAGCTGGATGGGCAGTACACGCCCCAACC...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGCTCCGTCAGGCGCTaGCGAACACTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGSVRR*RTLLCR
Trigger: CCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: GWTPSISRWLPLEVMALRIESLV*STAHLR
Trigger: CCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAAT...TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCCGATCAGCCGGTGGCTaGCATTGGAAGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: DPLDQPVAAIGSHGIESLRSAGG*HWKSWH
Trigger: ATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG...GAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQVFRLA*RARLSP
Trigger: TGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACAC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGACTTCGGGCAGGGTaGCTGCGGGGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSRLRAG*LRGCCQ
Trigger: CTGACAGCAGCCCCGCAGCCACCCTGCCCGAAGTCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGTGCGGGAGGAGGGCTaGCTCCTCAGGTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGVREEG*LLRSNS
Trigger: ACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCAC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGCAAGTGCTCCAAGTTTaGGTGCGGGAGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGQVLQV*VREEGW
Trigger: CCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTG...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCTGAGGCTCTGGCCCTaGTGCAGGAGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPLRLWP*CRRSPQ
Trigger: CTGGGGACTCCTCCTGCACCAGGGCCAGAGCCTCAG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGGGGTTGTTGACAATCTaGAAGCCACAGAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: LPARWGMRVFRLACRARLGLLTI*KPQRIS
Trigger: CGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCC...CAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSTRDPG*TPSISR
Trigger: CCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGTGGTGTGTCTGGGTCTaGGGAGCTGGGGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQWCVWV*GAGAVR
Trigger: TCTCACAGCCCCAGCTCCCCAGACCCAGACACACCA...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSCVCFG*LAGLGC
Trigger: ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATaGTTGGGACGGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSDSSSP*LGRRQG
Trigger: GCCCTGCCTCCGTCCCAACCATGGGCTGCTGCTGTC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGCCCCAGAGGTGGAGCTaGGAGCTGAGGGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGPQRWS*ELREQQ
Trigger: TTGCTGTTCCCTCAGCTCCCAGCTCCACCTCTGGGG...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGCTGAACCCCAGAGGTaGAGCTGGGAGCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGAEPQR*SWELRE
Trigger: TTCCCTCAGCTCCCAGCTCCACCTCTGGGGTTCAGC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGGGGCTGCGGCGGCCTaGGCTCGTGCCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCGAAAA*ARAASG
Trigger: TCCGGAAGCGGCACGAGCTCAGGCCGCCGCAGCCCC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCCACTGTGACTATGGCTaGGGCTCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATHCDYG*GSGPGA
Trigger: TGCACCAGGGCCAGAGCCTCAGCCATAGTCACAGTG...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGTCGCCTTCTCACTGTaGCTATGGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQVAFSL*LWLRLW
Trigger: CCAGAGCCTCAGCCATAGTCACAGTGAGAAGGCGAC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGCATGGCATGGCCACTaGGCTGCAGCTTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSAWHGH*AAASGR
Trigger: CCTTCCGGAAGCTGCAGCTCAGTGGCCATGCCATGC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGTTGTGCAGCCTTTCCTaGAGGTCATGCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: HSLLASQVGNACVSAGLQLCSLS*RSCRLC
Trigger: GCAGAGTCTGCATGACCTTCAGGAAAGGCTGCACAA...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGCTGCAGCCACTTCTaGAGGGCCTCTGGAGCATAC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSSCSHF*RASGAY
Trigger: GTATGCTCCAGAGGCCCTTCAGAAGTGGCTGCAGCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQEGSHQ*VDARVV
Trigger: AACAACCCTGGCATCCACTCACTGGTGGCTGCCCTC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSAARLI*GGLGAT
Trigger: TGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGGGGAGCTGGGGCTGTaGGAACGGGAAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSGELGL*EREESK
Trigger: TTTGGATTCTTCCCGTTCTCACAGCCCCAGCTCCCC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCGGGGAGCTGGGGCTGTaGGAACGGGAAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GLESVSSPIEPLSSSATAGELGL*EREESK
Trigger: TTTGGATTCTTCCCGTTCTCACAGCCCCAGCTCCCC...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGCAGAGACAGAAGCTaGACCCCAGAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSSRDRS*TPEVEL
Trigger: CAGCTCCACCTCTGGGGTTCAGCTTCTGTCTCTGCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGAGAGAGCGGTCACTaGACCTACGCCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATRESGH*TYAPSA
Trigger: GGCTGATGGGGCGTAGGTTCAGTGACCGCTCTCTCT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAGATTACTACACCCCTaGGGAAGGGGGCGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGERLLHP*GRGRPE
Trigger: CTCCGGCCGCCCCCTTCCGCAGGGGTGTAGTAATCT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCACCTCCACTGTGCGGTaGTCCTCCTGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSTSTVR*SSWALC
Trigger: GCACAAGGCCCAGGAGGAGCACCGCACAGTGGAGGT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGAAGGCCTCCCGAACCTaGTCCAACTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQKASRT*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTT...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTTTGGCCACCAGCAGCTaGTTCTCAGCATTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: PWVDPLDQPVAAIGSHGILATSS*FSAFCF
Trigger: GAAGCAAAATGCTGAGAAGCAGCTGCTGGTGGCCAA...AATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSALPQC*CHLAQC
Trigger: GCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSALPQC*CHLAQC
Trigger: GCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGCAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEQALPQ*CCHLAQ
Trigger: CTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTG...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSQALPQ*CCHLAQ
Trigger: CTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCATCTGTTGCCAGCGGTaGAGGCGCTCCCGCAATGCT +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGICCQR*RRSRNA
Trigger: AGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGAT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAATCTGTTGCCAGCGGTaGAGGCGCTCCCGCAATGCT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGICCQR*RRSRNA
Trigger: AGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGAT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCATCTGTTGCCAGCGGTaGAGGCGCTCCCGCAATGCT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATICCQR*RRSRNA
Trigger: AGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGAT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTGCCGAACACTGCTCTaGAGGCTAGGGGACTGCATG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSCRTLL*RLGDCM
Trigger: CATGCAGTCCCCTAGCCTGCAGAGCAGTGTTCGGCA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300737.8
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGTGTTTCGGCTGGCTTaGAGGGCTCGGCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSVFRLA*RARLSP
Trigger: TGGGGACAGCCGAGCCCTGCAAGCCAGCCGAAACAC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGAGAGACAAATCCTCCTaGAGTGTGGGGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGRDKSS*SVGEQG
Trigger: CCCCTGCTCCCCCACACTGCAGGAGGATTTGTCTCT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGAGACAAATCCTCCTaGAGTGTGGGGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSRDKSS*SVGEQG
Trigger: CCCCTGCTCCCCCACACTGCAGGAGGATTTGTCTCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCCAGGCATCACAGCGGTaGTGTCAGAAGGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSQASQR*CQKGVC
Trigger: ACACACCCCCTTCTGACAGCACCGCTGTGATGCCTG...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGTTGGCCCCCGAGCTaGTTCCTGTCGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSWPPS*FLSPSH
Trigger: GTGAGAAGGCGACAGGAACCAGCTCGGGGGCCAACT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCAGTTGGCCCCCGAGCTaGTTCCTGTCGCCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGSWPPS*FLSPSH
Trigger: GTGAGAAGGCGACAGGAACCAGCTCGGGGGCCAACT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGGTGACAGCCAGCCTTaGCATGGCATGGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATGDSQP*HGMATE
Trigger: CTCAGTGGCCATGCCATGCCAAGGCTGGCTGTCACC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGGTGACAGCCAGCCTTaGCATGGCATGGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGGDSQP*HGMATE
Trigger: CTCAGTGGCCATGCCATGCCAAGGCTGGCTGTCACC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGAGCTCCTTCAGCCGCTaGGCTTCCTGCTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQSSFSR*ASCLAR
Trigger: CCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCT...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGAGCTGTGGGCCACGTaGAAGGTGCCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSELWAT*KVPKSV
Trigger: CACACTCTTTGGCACCTTCCACGTGGCCCACAGCTC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCCAGGGAAGAGCTGTaGGCCACGTGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSREEL*ATWKVP
Trigger: TGGCACCTTCCACGTGGCCCACAGCTCTTCCCTGGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAATCCAGGGAAGAGCTGTaGGCCACGTGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQSREEL*ATWKVP
Trigger: TGGCACCTTCCACGTGGCCCACAGCTCTTCCCTGGA...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTTGGGGGCCACACGCTaGCGGTCACTCATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSLGATR*RSLMWR
Trigger: CCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp CTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCTTCTTGGGGGCCACACGCTaGCGGTCACTCATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LESVSSPIEPLSSSATAFLGATR*RSLMWR
Trigger: CCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAA...GAAGGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTCATCTGAGGAGGTTTaGGGGCCACACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWSSEEV*GPHAGG
Trigger: ACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCATCTGAGGAGGTTTaGGGGCCACACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSSEEV*GPHAGG
Trigger: ACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGCCTTGTCCAGCCCATaGTTCAGCGCCAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQALSSP*FSASNA
Trigger: GGCATTACTGGCGCTGAACCATGGGCTGGACAAGGC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTGGTGTGTCTGGGTCTaGGGAGCTGGGGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATWCVWV*GAGAVR
Trigger: TCTCACAGCCCCAGCTCCCCAGACCCAGACACACCA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAATGGAGATGGTGTGTCTaGGTCTGGGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQWRWCV*VWGAGA
Trigger: AGCCCCAGCTCCCCAGACCCAGACACACCATCTCCA...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATGGAGATGGTGTGTCTaGGTCTGGGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGWRWCV*VWGAGA
Trigger: AGCCCCAGCTCCCCAGACCCAGACACACCATCTCCA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCGTCCCCAACTGGAGATaGTGTGTCTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GLESVSSPIEPLSSSATAVPNWR*CVWVWG
Trigger: TCCCCAGACCCAGACACACCATCTCCAGTTGGGGAC...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGTCGGCTGTCCCCAACTaGAGATGGTGTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQSAVPN*RWCVWV
Trigger: GACCCAGACACACCATCTCCAGTTGGGGACAGCCGA...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTCGGCTGTCCCCAACTaGAGATGGTGTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSSAVPN*RWCVWV
Trigger: GACCCAGACACACCATCTCCAGTTGGGGACAGCCGA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTCGGCTGTCCCCAACTaGAGATGGTGTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGSAVPN*RWCVWV
Trigger: GACCCAGACACACCATCTCCAGTTGGGGACAGCCGA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACCCCAGAGGTGGAGCTaGGAGCTGAGGGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGPQRWS*ELREQQ
Trigger: TTGCTGTTCCCTCAGCTCCCAGCTCCACCTCTGGGG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGCTGAACCCCAGAGGTaGAGCTGGGAGCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGAEPQR*SWELRE
Trigger: TTCCCTCAGCTCCCAGCTCCACCTCTGGGGTTCAGC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTGGCTGTGGCTCTCCTaGCCAGGGGAGCCACTTGTC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPWLWLS*PGEPLV
Trigger: GACAAGTGGCTCCCCTGGCCAGGAGAGCCACAGCCA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCCCTGTATCATGGCTGTaGCTCTCCTGGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATPVSWL*LSWPGE
Trigger: CTCCCCTGGCCAGGAGAGCCACAGCCATGATACAGG...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAAGGGTGGGGGAAAGTaGTCACACAGCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSKGGGK*SHSRLH
Trigger: GTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACGGCTTGTCAAGAAGTaGCCAGCCTCGCCCTCTACC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGRLVKK*PASPST
Trigger: GGTAGAGGGCGAGGCTGGCCACTTCTTGACAAGCCG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCAGTCAACATGCGTCTaGTGTGGACACCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQQSTCV*CGHLGI
Trigger: GATCCCGAGGTGTCCACATCAGACGCATGTTGACTG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CGGCCTGGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCGGACTGCCTCGAAGCTaGGTTTCTCATCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RPGLESVSSPIEPLSSSAGLPRS*VSHPHC
Trigger: ACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCC...GGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCCAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp CTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTGCGCAGCTCCACATATGTaGTCAGCCACTGTACCACCT +
Preference number: 4 (lower is better)
Translates to: LDQPVAAIGSHGIESLVCAAPHM*SATVPP
Trigger: AGGTGGTACAGTGGCTGATCACATATGTGGAGCTGC...GCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTCATGGTGGTGTTGGTaGCAGCCAGCCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSWWCW*QPALAW
Trigger: CCATGCCAAGGCTGGCTGTCACCAACACCACCATGA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTCATGGTGGTGTTGGTaGCAGCCAGCCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGSWWCW*QPALAW
Trigger: CCATGCCAAGGCTGGCTGTCACCAACACCACCATGA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CGGCCTGGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCGGATGCCAGGGTTGTTaGCAATCTGGAAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: RPGLESVSSPIEPLSSSAGCQGC*QSGSHR
Trigger: TCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCC...GGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCCAGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSEGSHQ*VDARVV
Trigger: AACAACCCTGGCATCCACTCACTGGTGGCTGCCCTC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGCTGGGGTCTATGTTaGGGGCAGCCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSWGLC*GQPPVS
Trigger: ACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGGGGAGCTGGGGCTGTaGGAACGGGAAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGGELGL*EREESK
Trigger: TTTGGATTCTTCCCGTTCTCACAGCCCCAGCTCCCC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGGGGAGCTGGGGCTGTaGGAACGGGAAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQGELGL*EREESK
Trigger: TTTGGATTCTTCCCGTTCTCACAGCCCCAGCTCCCC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGCAGAGACAGAAGCTaGACCCCAGAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSRDRS*TPEVEL
Trigger: CAGCTCCACCTCTGGGGTTCAGCTTCTGTCTCTGCT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGCAGAGACAGAAGCTaGACCCCAGAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSRDRS*TPEVEL
Trigger: CAGCTCCACCTCTGGGGTTCAGCTTCTGTCTCTGCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGGGGTGGAACAGATCTaGGGCACACATGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQGVEQI*GTHVRS
Trigger: GCTTCTGACATGTGTGCCTCAGATCTGTTCCACCCC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGGGAGCCACTTGTCCTaGGCCCTAGGAGTATTGATG +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQGSHLS*ALGVLM
Trigger: CATCAATACTCCTAGGGCTCAGGACAAGTGGCTCCC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTATTTCCAGAGGGACTaGTCATCCGAGCCGGCGGAT +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSYFQRD*SSEPAD
Trigger: ATCCGCCGGCTCGGATGATCAGTCCCTCTGGAAATA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS-3UTR GCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAGGCGGCCTGAGCTCGTaGCGCTTCCGGAGACTTCGG +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRGGLSS*RFRRLR
Trigger: CCGAAGTCTCCGGAAGCGGCACGAGCTCAGGCCGCC...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGCAGCCAAAGGTCAAGTaGTCCAAGTTTGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGQPKVK*SKFGCG
Trigger: CCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTG...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAAAGGCCTCCCGAACCTaGTCCAACTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQKASRT*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGGTTGGGGCGTGTACTaGCCATCCAGCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSGWGVY*PSSWGL
Trigger: TAGACCCCAGCTGGATGGGCAGTACACGCCCCAACC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGGTTGGGGCGTGTACTaGCCATCCAGCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSGWGVY*PSSWGL
Trigger: TAGACCCCAGCTGGATGGGCAGTACACGCCCCAACC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATGCCGAACACTGCTCTaGAGGCTAGGGGACTGCATG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGCRTLL*RLGDCM
Trigger: CATGCAGTCCCCTAGCCTGCAGAGCAGTGTTCGGCA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQIESLV*STAHLR
Trigger: CCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAAT...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGIESLV*STAHLR
Trigger: CCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAAT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCCAGCCAGGTGGGGAATaGGTGTGTTTCGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATQPGGE*VCFGWL
Trigger: AAGCCAGCCGAAACACACGCATTCCCCACCTGGCTG...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACAGCCAGGTGGGGAATaGGTGTGTTTCGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGQPGGE*VCFGWL
Trigger: AAGCCAGCCGAAACACACGCATTCCCCACCTGGCTG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAACAGCCAGGTGGGGAATaGGTGTGTTTCGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQQPGGE*VCFGWL
Trigger: AAGCCAGCCGAAACACACGCATTCCCCACCTGGCTG...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGCAGGTATGTACAGTaGCCAGACCCCTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGRYVQ*PDPWTS
Trigger: GCTGGTCCAGGGGTCTGGGCACTGTACATACCTGCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGGCAGGTATGTACAGTaGCCAGACCCCTGGACCAGC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEGRYVQ*PDPWTS
Trigger: GCTGGTCCAGGGGTCTGGGCACTGTACATACCTGCC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGAGACAAATCCTCCTaGAGTGTGGGGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGRDKSS*SVGEQG
Trigger: CCCCTGCTCCCCCACACTGCAGGAGGATTTGTCTCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTGCCGAACACTGCTCTaGAGGCTAGGGGCGGGGTAT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPCRTLL*RLGAGY
Trigger: ATACCCCGCCCCTAGCCTGCAGAGCAGTGTTCGGCA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGACTCCTCAGAGTTaGCCCCCGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEWTPQS*PPSWFL
Trigger: CAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCA...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGCCTTGGCATGGCATaGCCACTGAGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSLGMA*PLSCSF
Trigger: GAAGCTGCAGCTCAGTGGCCATGCCATGCCAAGGCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGTCTTCATGTGCTCCTTaGAGTAACGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: SPPETLGGPPRSAGGCHWSSCAP*SNGSGY
Trigger: ATATCCAGAACCGTTACTCCAAGGAGCACATGAAGA...CCAATGGCAGCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGAGCTGTGGGCCACGTaGAAGGTGCCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQELWAT*KVPKSV
Trigger: CACACTCTTTGGCACCTTCCACGTGGCCCACAGCTC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGAATSE*MPGLLT
Trigger: TGTCAACAACCCTGGCATCCACTCACTGGTGGCTGC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSAATSE*MPGLLT
Trigger: TGTCAACAACCCTGGCATCCACTCACTGGTGGCTGC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTCATCTGAGGAGGTTTaGGGGCCACACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPSSEEV*GPHAGG
Trigger: ACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTCATCTGAGGAGGTTTaGGGGCCACACGCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSSEEV*GPHAGG
Trigger: ACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAACCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQPSISR*LPLEVM
Trigger: CATGACTTCCAATGGCAGCCACCGGCTGATCGAGGG...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGCCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWPSISR*LPLEVM
Trigger: CATGACTTCCAATGGCAGCCACCGGCTGATCGAGGG...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGPSISR*LPLEVM
Trigger: CATGACTTCCAATGGCAGCCACCGGCTGATCGAGGG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCCCCTCGATCAGCCGGTaGCTGCCATTGGAAGTCATG +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATPSISR*LPLEVM
Trigger: CATGACTTCCAATGGCAGCCACCGGCTGATCGAGGG...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGCCTTGTCCAGCCCATaGTTCAGCGCCAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGALSSP*FSASNA
Trigger: GGCATTACTGGCGCTGAACCATGGGCTGGACAAGGC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGGAAGAATCCAAATGTaGAGAGCCACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSGRIQM*RATRWG
Trigger: GCCCCACCTGGTGGCTCTCCACATTTGGATTCTTCC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTGGTGTGTCTGGGTCTaGGGAGCTGGGGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSWCVWV*GAGAVR
Trigger: TCTCACAGCCCCAGCTCCCCAGACCCAGACACACCA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTGGAGATGGTGTGTCTaGGTCTGGGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSWRWCV*VWGAGA
Trigger: AGCCCCAGCTCCCCAGACCCAGACACACCATCTCCA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGGTCCCCAACTGGAGATaGTGTGTCTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWVPNWR*CVWVWG
Trigger: TCCCCAGACCCAGACACACCATCTCCAGTTGGGGAC...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGTCCCCAACTGGAGATaGTGTGTCTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGVPNWR*CVWVWG
Trigger: TCCCCAGACCCAGACACACCATCTCCAGTTGGGGAC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSCVCFG*LAGLGC
Trigger: ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTTCTTGCCAGCCAGGTaGGGAATGCGTGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGFLPAR*GMRVFR
Trigger: CCGAAACACACGCATTCCCCACCTGGCTGGCAAGAA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCTTCCGGCCTGGGCTaGAGTCTGTTTCCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSSGLG*SLFPRQ
Trigger: TTGGCGAGGAAACAGACTCCAGCCCAGGCCGGAAGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCTGAACCCCAGAGGTaGAGCTGGGAGCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSAEPQR*SWELRE
Trigger: TTCCCTCAGCTCCCAGCTCCACCTCTGGGGTTCAGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGCCCTAGCCCCAGTCTaGAGCAAACAGAACCACTGT +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGALAPV*SKQNHC
Trigger: ACAGTGGTTCTGTTTGCTCCAGACTGGGGCTAGGGC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGGTTTCACTCCCCCATaGATCCCTGGAGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQGFTPP*IPGGLS
Trigger: ACTCAGGCCTCCAGGGATCCATGGGGGAGTGAAACC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTGGCTTGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGACTCCGAATCGGAATaGGTCAAATCCCTTACTAGA +
Preference number: 4 (lower is better)
Translates to: LACRARLSPTGDGVSGSGDSESE*VKSLTR
Trigger: TCTAGTAAGGGATTTGACCCATTCCGATTCGGAGTC...CCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGTCGCCTTCTCACTGTaGCTATGGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEVAFSL*LWLRLW
Trigger: CCAGAGCCTCAGCCATAGTCACAGTGAGAAGGCGAC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGTCGCCTTCTCACTGTaGCTATGGCTGAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPVAFSL*LWLRLW
Trigger: CCAGAGCCTCAGCCATAGTCACAGTGAGAAGGCGAC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGCAGCTCCACATATGTaGTCAGCCACTGTACCACCT +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSAAPHM*SATVPP
Trigger: AGGTGGTACAGTGGCTGATCACATATGTGGAGCTGC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCTGCAGCCACTTCTaGAGGGCCTCTGGAGCATAC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSCSHF*RASGAY
Trigger: GTATGCTCCAGAGGCCCTTCAGAAGTGGCTGCAGCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGGATGCCAGGGTTGTTaGCAATCTGGAAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGGCQGC*QSGSHR
Trigger: TCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCTGGGGTCTATGTTaGGGGCAGCCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSWGLC*GQPPVS
Trigger: ACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTGGGTCAAATCCCTCTaGGATCCCAGGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATWVKSL*DPRPCC
Trigger: ACAGCATGGCCTGGGATCTCAGAGGGATTTGACCCA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300737.8
ENST00000526596.2
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATGGAAGTCATGGCATTaGGAGCCTCGTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGWKSWH*EPRLQH
Trigger: GTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGGGAGCTGGGGCTGTaGGAACGGGAAGAATCCAAA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGELGL*EREESK
Trigger: TTTGGATTCTTCCCGTTCTCACAGCCCCAGCTCCCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAGCAGAGACAGAAGCTaGACCCCAGAGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSRDRS*TPEVEL
Trigger: CAGCTCCACCTCTGGGGTTCAGCTTCTGTCTCTGCT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGGGGTGGAACAGATCTaGGGCACACATGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGGVEQI*GTHVRS
Trigger: GCTTCTGACATGTGTGCCTCAGATCTGTTCCACCCC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCCACTCATGCTCCAATaGACAGATGCCTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQPLMLQ*TDASPN
Trigger: GTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGAAAGACTGTCCAGATaGAAGGCTGCGCATTCGCCG +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQERLSR*KAAHSP
Trigger: CGGCGAATGCGCAGCCTTTCATCTGGACAGTCTTTC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR GCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAAGCCACCCGCGAGCCTaGCCCCTCCAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRSHPRA*PLQQPK
Trigger: CTTTGGCTGTTGGAGGGGGCAGGCTCGCGGGTGGCT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCAGGTCATGCAGACTCTaGTCAGCTCGGTGTAACCCC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGRSCRL*SARCNP
Trigger: GGGGTTACACCGAGCTGAGCAGAGTCTGCATGACCT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAAGGCCTCCCGAACCTaGTCCAACTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSKASRT*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAAGGCCTCCCGAACCTaGTCCAACTCCTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSKASRT*SNSSSA
Trigger: TGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGCCGAACACTGCTCTaGAGGCTAGGGGACTGCATG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGECRTLL*RLGDCM
Trigger: CATGCAGTCCCCTAGCCTGCAGAGCAGTGTTCGGCA...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300737.8
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACGATCAGCCGGTGGCTaGCATTGGAAGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGRSAGG*HWKSWH
Trigger: ATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCGATCAGCCGGTGGCTaGCATTGGAAGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGRSAGG*HWKSWH
Trigger: ATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGCTCCAATGAACAGATaGCTCTCCCAACCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGAPMNR*LSQPIP
Trigger: GGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGAGCCAGGCAGCATACTaGATGGACAAGGGAGACACA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGSQAAY*MDKGDT
Trigger: TGTGTCTCCCTTGTCCATGCAGTATGCTGCCTGGCT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS-3UTR GCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGTCCAGATGAAAGGCTaGGCATTCGCCGCAGAGATA +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSVQMKG*AFAAEI
Trigger: TATCTCTGCGGCGAATGCGCAGCCTTTCATCTGGAC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCCCAAGCTCTCTGAATaGCCAGGCATCACAGCGGTG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPPKLSE*PGITAV
Trigger: CACCGCTGTGATGCCTGGGCATTCAGAGAGCTTGGG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR CCA 90 bp GCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: AFLPARWGMRVFRLACRAAVFHC*VMVIEV
Trigger: GACCTCAATTACCATGACCCAACAGTGAAACACAGC...AGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAGCTCCTTCAGCCGCTaGGCTTCCTGCTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGESSFSR*ASCLAR
Trigger: CCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCTCCTTCAGCCGCTaGGCTTCCTGCTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSSFSR*ASCLAR
Trigger: CCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp CCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCGTCTGCAGCACGGCTTCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: PVAAIGSHGIESLVCSTASSAYF*RLRSFS
Trigger: TGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGA...AGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGAGCTGTGGGCCACGTaGAAGGTGCCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPELWAT*KVPKSV
Trigger: CACACTCTTTGGCACCTTCCACGTGGCCCACAGCTC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGAGCTGTGGGCCACGTaGAAGGTGCCAAAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSELWAT*KVPKSV
Trigger: CACACTCTTTGGCACCTTCCACGTGGCCCACAGCTC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGAATSE*MPGLLT
Trigger: TGTCAACAACCCTGGCATCCACTCACTGGTGGCTGC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGCCTTGTCCAGCCCATaGTTCAGCGCCAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEALSSP*FSASNA
Trigger: GGCATTACTGGCGCTGAACCATGGGCTGGACAAGGC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGTCCCCAACTGGAGATaGTGTGTCTGGGTCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSVPNWR*CVWVWG
Trigger: TCCCCAGACCCAGACACACCATCTCCAGTTGGGGAC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTCGGCTGTCCCCAACTaGAGATGGTGTGTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSAVPN*RWCVWV
Trigger: GACCCAGACACACCATCTCCAGTTGGGGACAGCCGA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTTCTTGCCAGCCAGGTaGGGAATGCGTGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWFLPAR*GMRVFR
Trigger: CCGAAACACACGCATTCCCCACCTGGCTGGCAAGAA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATTCTTGCCAGCCAGGTaGGGAATGCGTGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGFLPAR*GMRVFR
Trigger: CCGAAACACACGCATTCCCCACCTGGCTGGCAAGAA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTCTTCCGGCCTGGGCTaGAGTCTGTTTCCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSSGLG*SLFPRQ
Trigger: TTGGCGAGGAAACAGACTCCAGCCCAGGCCGGAAGA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGACATGCACTGAAGTaGAGAGGGAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSRHALK*RGSDSS
Trigger: GCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAAGGGTGGGGGAAAGTaGTCACACAGCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSKGGGK*SHSRLH
Trigger: GTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGGAGTTGTCTAGAGGGTaGGAAGGGTGGGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWELSRG*EGWGKV
Trigger: CACTTTCCCCCACCCTTCCCACCCTCTAGACAACTC...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCAGTCAACATGCGTCTaGTGTGGACACCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSQSTCV*CGHLGI
Trigger: GATCCCGAGGTGTCCACATCAGACGCATGTTGACTG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGGACTGCCTCGAAGCTaGGTTTCTCATCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGGLPRS*VSHPHC
Trigger: ACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGCAGCTCCACATATGTaGTCAGCCACTGTACCACCT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGAAPHM*SATVPP
Trigger: AGGTGGTACAGTGGCTGATCACATATGTGGAGCTGC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCCTCATGAAGTCCTTGAGGTaGTTATGGCGAGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: DPLDQPVAAIGSHGIESLMKSLR*LWRVKR
Trigger: TCTCTTGACTCGCCATAATCACCTCAAGGACTTCAT...GAGGCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTTGTGCAGCCTTTCCTaGAGGTCATGCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGLCSLS*RSCRLC
Trigger: GCAGAGTCTGCATGACCTTCAGGAAAGGCTGCACAA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATTGTGCAGCCTTTCCTaGAGGTCATGCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGLCSLS*RSCRLC
Trigger: GCAGAGTCTGCATGACCTTCAGGAAAGGCTGCACAA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCCTCGTCTGCAGCACGGCTCATCTGAGGAGGTTTGGGGGCCACACGCTGGCGGCTGTTAGAATTTTATaGTCTACATCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SLVCSTAHLRRFGGHTLAAVRIL*STSSRE
Trigger: TTCCCTGGATGATGTAGATCATAAAATTCTAACAGC...CGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGGATGCCAGGGTTGTTaGCAATCTGGAAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATGCQGC*QSGSHR
Trigger: TCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTGGGTCAAATCCCTCTaGGATCCCAGGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSWVKSL*DPRPCC
Trigger: ACAGCATGGCCTGGGATCTCAGAGGGATTTGACCCA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTGGAAGTCATGGCATTaGGAGCCTCGTCTGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSWKSWH*EPRLQH
Trigger: GTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGGGGTGGAACAGATCTaGGGCACACATGTCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEGVEQI*GTHVRS
Trigger: GCTTCTGACATGTGTGCCTCAGATCTGTTCCACCCC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTGGTGGGTTGTTCTCTaGGAATTGGTTTCACTCCCC +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSWWVVL*ELVSLP
Trigger: GGGGAGTGAAACCAATTCTCAGAGAACAACCCACCA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCCACTCATGCTCCAATaGACAGATGCCTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGPLMLQ*TDASPN
Trigger: GTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGGAGCCACTTGTCCTaGGCCCTAGGAGTATTGATG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGSHLS*ALGVLM
Trigger: CATCAATACTCCTAGGGCTCAGGACAAGTGGCTCCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTGGTTGTGTCCTTTTTaGGCCTCTGGCCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWWLCPF*ASGQGY
Trigger: GTAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTCAGCCAAAGGTCAAGTaGTCCAAGTTTGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSQPKVK*SKFGCG
Trigger: CCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTG...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCTCGGCAAAACTCTGCTaGAGTGGACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLESVSSPIEPLSSSATASAKLC*SGLLRV
Trigger: AACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGA...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCCTCACCATGGAAGGTaGTGTGTTTCACTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQPHHGR*CVSLLG
Trigger: ACCCAACAGTGAAACACAGCACCTTCCATGGTGAGG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCCCTCACCATGGAAGGTaGTGTGTTTCACTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: GLESVSSPIEPLSSSATAPHHGR*CVSLLG
Trigger: ACCCAACAGTGAAACACAGCACCTTCCATGGTGAGG...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAGGTCATGCAGACTCTaGTCAGCTCGGTGTAACCCC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPRSCRL*SARCNP
Trigger: GGGGTTACACCGAGCTGAGCAGAGTCTGCATGACCT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAGGTCATGCAGACTCTaGTCAGCTCGGTGTAACCCC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSRSCRL*SARCNP
Trigger: GGGGTTACACCGAGCTGAGCAGAGTCTGCATGACCT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGGTCATGCAGACTCTaGTCAGCTCGGTGTAACCCC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSRSCRL*SARCNP
Trigger: GGGGTTACACCGAGCTGAGCAGAGTCTGCATGACCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAACCTCCACTGTGCGGTaGTCCTCCTGGGCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRTSTVR*SSWALC
Trigger: GCACAAGGCCCAGGAGGAGCACCGCACAGTGGAGGT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTTGGCCACCAGCAGCTaGTTCTCAGCATTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGLATSS*FSAFCF
Trigger: GAAGCAAAATGCTGAGAAGCAGCTGCTGGTGGCCAA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGGGGCCACGTGGAAGGTaGCAAAGAGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWGPRGR*QRVCFS
Trigger: AGAGAAACACACTCTTTGGCACCTTCCACGTGGCCC...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSIESLV*STAHLR
Trigger: CCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAAT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCGATCAGCCGGTGGCTaGCATTGGAAGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPRSAGG*HWKSWH
Trigger: ATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCGATCAGCCGGTGGCTaGCATTGGAAGTCATGGCAT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSRSAGG*HWKSWH
Trigger: ATGCCATGACTTCCAATGGCAGCCACCGGCTGATCG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGACTGCCACCCCATCCTaGCTACTTCTTAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQTATPS*LLLKRL
Trigger: AAGCCTCTTAAGAAGTAGGCAGGATGGGGTGGCAGT...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCAAGCTGTCCCTTTACTaGCACCCCATCCTGCCTACT +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGKLSLY*HPILPT
Trigger: AGTAGGCAGGATGGGGTGGCAGTAAAGGGACAGCTT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAAGCTGTCCCTTTACTaGCACCCCATCCTGCCTACT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGKLSLY*HPILPT
Trigger: AGTAGGCAGGATGGGGTGGCAGTAAAGGGACAGCTT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGCATCCACATCACCATTaGCATCATCGTCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: HSLLASQVGNACVSAGLQHPHHH*HHRPSV
Trigger: AACTGATGGACGATGATGCCAATGGTGATGTGGATG...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGGGTTGTTGACAATCTaGAAGCCACAGAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGGLLTI*KPQRIS
Trigger: CGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCC...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSAATSE*MPGLLT
Trigger: TGTCAACAACCCTGGCATCCACTCACTGGTGGCTGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATTGGGGGCCACACGCTaGCGGTCACTCATGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRLGATR*RSLMWR
Trigger: CCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGAAGAATCCAAATGTaGAGAGCCACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGRIQM*RATRWG
Trigger: GCCCCACCTGGTGGCTCTCCACATTTGGATTCTTCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGGAAGAATCCAAATGTaGAGAGCCACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSGRIQM*RATRWG
Trigger: GCCCCACCTGGTGGCTCTCCACATTTGGATTCTTCC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGGAAGAATCCAAATGTaGAGAGCCACCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEGRIQM*RATRWG
Trigger: GCCCCACCTGGTGGCTCTCCACATTTGGATTCTTCC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWKLLPA*AGVCFL
Trigger: GAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTT...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGACATGCACTGAAGTaGAGAGGGAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGRHALK*RGSDSS
Trigger: GCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGGAGTATTGATGCTTaGGGAGCTTTGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGRSIDA*GALGQH
Trigger: GTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATGGCTGTGGCTCTCCTaGCCAGGGGAGCCACTTGTC +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRWLWLS*PGEPLV
Trigger: GACAAGTGGCTCCCCTGGCCAGGAGAGCCACAGCCA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAAGAGCCCTGTATCATaGCTGTGGCTCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSKSPVS*LWLSWP
Trigger: TGGCCAGGAGAGCCACAGCCATGATACAGGGCTCTT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAAGAGCCCTGTATCATaGCTGTGGCTCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPKSPVS*LWLSWP
Trigger: TGGCCAGGAGAGCCACAGCCATGATACAGGGCTCTT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGAGTTGTCTAGAGGGTaGGAAGGGTGGGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSELSRG*EGWGKV
Trigger: CACTTTCCCCCACCCTTCCCACCCTCTAGACAACTC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGAGTTGTCTAGAGGGTaGGAAGGGTGGGGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEELSRG*EGWGKV
Trigger: CACTTTCCCCCACCCTTCCCACCCTCTAGACAACTC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGGCAGATGGAGAGCTaGTCCCGTAGCCTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSRQMES*SRSLQN
Trigger: GTTCTGAAGGCTACGGGACCAGCTCTCCATCTGCCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
3UTR CAA 72 bp GTCCTGAGCCCTAGGAGTATTGATGCTTGGGGAGCTTaGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VLSPRSIDAWGA*GQHLLETNPPA
Trigger: TGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCTAGGGCTCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGACACTGTGACTATGGCTaGGGCTCTGGCCCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRHCDYG*GSGPGA
Trigger: TGCACCAGGGCCAGAGCCTCAGCCATAGTCACAGTG...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGCAGCTCCACATATGTaGTCAGCCACTGTACCACCT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPAAPHM*SATVPP
Trigger: AGGTGGTACAGTGGCTGATCACATATGTGGAGCTGC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAAGGTCTCCTCATACTaGGGCAGCTCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGKVSSY*GSSTYV
Trigger: CACATATGTGGAGCTGCCTCAGTATGAGGAGACCTT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAAAGGTCTCCTCATACTaGGGCAGCTCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQKVSSY*GSSTYV
Trigger: CACATATGTGGAGCTGCCTCAGTATGAGGAGACCTT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTTGTGCAGCCTTTCCTaGAGGTCATGCAGACTCTGC +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSLCSLS*RSCRLC
Trigger: GCAGAGTCTGCATGACCTTCAGGAAAGGCTGCACAA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGGATGCCAGGGTTGTTaGCAATCTGGAAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSGCQGC*QSGSHR
Trigger: TCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPREGSHQ*VDARVV
Trigger: AACAACCCTGGCATCCACTCACTGGTGGCTGCCCTC...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTCAGTCATGATGAAGTaGGCAGGGTTGGGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSVMMK*AGLGRV
Trigger: TACACGCCCCAACCCTGCTCACTTCATCATGACTGA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTCAGTCATGATGAAGTaGGCAGGGTTGGGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGESVMMK*AGLGRV
Trigger: TACACGCCCCAACCCTGCTCACTTCATCATGACTGA...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTCAGTCATGATGAAGTaGGCAGGGTTGGGGCGTGTA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSVMMK*AGLGRV
Trigger: TACACGCCCCAACCCTGCTCACTTCATCATGACTGA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAATGGTGGGTTGTTCTCTaGGAATTGGTTTCACTCCCC +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQWWVVL*ELVSLP
Trigger: GGGGAGTGAAACCAATTCTCAGAGAACAACCCACCA...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCCACTCATGCTCCAATaGACAGATGCCTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSPLMLQ*TDASPN
Trigger: GTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTGGTTGTGTCCTTTTTaGGCCTCTGGCCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPWLCPF*ASGQGY
Trigger: GTAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTCGGCAAAACTCTGCTaGAGTGGACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWSAKLC*SGLLRV
Trigger: AACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGTGGATGTTACGGACTaGCTCGAAGCTGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQVDVTD*LEAEFL
Trigger: GAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCAC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAGCCGCTGGGCTTCCTaGTTAGCAAGGTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSRWAS*LARLIS
Trigger: TGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAGCCGCTGGGCTTCCTaGTTAGCAAGGTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGESRWAS*LARLIS
Trigger: TGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATTGGCCACCAGCAGCTaGTTCTCAGCATTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGLATSS*FSAFCF
Trigger: GAAGCAAAATGCTGAGAAGCAGCTGCTGGTGGCCAA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTTGGCCACCAGCAGCTaGTTCTCAGCATTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGLATSS*FSAFCF
Trigger: GAAGCAAAATGCTGAGAAGCAGCTGCTGGTGGCCAA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGGGCCACGTGGAAGGTaGCAAAGAGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSGPRGR*QRVCFS
Trigger: AGAGAAACACACTCTTTGGCACCTTCCACGTGGCCC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAAGCTGTCCCTTTACTaGCACCCCATCCTGCCTACT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSKLSLY*HPILPT
Trigger: AGTAGGCAGGATGGGGTGGCAGTAAAGGGACAGCTT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAAGCTGTCCCTTTACTaGCACCCCATCCTGCCTACT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSKLSLY*HPILPT
Trigger: AGTAGGCAGGATGGGGTGGCAGTAAAGGGACAGCTT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGACAGCAACTAAGACATaGACTGAAGTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGTATKT*TEVERE
Trigger: CTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGCTCCAATGAACAGATaGCTCTCCCAACCCATTCCC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEAPMNR*LSQPIP
Trigger: GGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGCTCCAATGAACAGATaGCTCTCCCAACCCATTCCC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSAPMNR*LSQPIP
Trigger: GGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGTCTGGCATCCACTCATaGTCCAATGAACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQSGIHS*SNEQMP
Trigger: AGGCATCTGTTCATTGGAGCATGAGTGGATGCCAGA...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCTAACAAGGGGAATATaGAGCGTAGGCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQLTRGI*SVGTWE
Trigger: TTCCCAAGTGCCTACGCTGCATATTCCCCTTGTTAG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGCGAGCAGCAGAAGCTaGGGAGGGCGTGCGACCCGC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKASSRS*GGRATR
Trigger: GCGGGTCGCACGCCCTCCCCAGCTTCTGCTGCTCGC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGACAAGTGCTCCAAGTTTaGGTGCGGGAGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRQVLQV*VREEGW
Trigger: CCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTG...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAACATGCGTCTGATGTaGACACCTCGGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSNMRLM*TPRDPR
Trigger: TCTGGGATCCCGAGGTGTCCACATCAGACGCATGTT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATGGACTCCTCAGAGTTaGCCCCCGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRWTPQS*PPSWFL
Trigger: CAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGSSAYF*RLRSFS
Trigger: TGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATCCAGGGAAGAGCTGTaGGCCACGTGGAAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRSREEL*ATWKVP
Trigger: TGGCACCTTCCACGTGGCCCACAGCTCTTCCCTGGA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCACCAGAGACCCTGGGTaGACCCCCTCGATCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCTRDPG*TPSISR
Trigger: CCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATGGTGTGTCTGGGTCTaGGGAGCTGGGGCTGTGAGA +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRWCVWV*GAGAVR
Trigger: TCTCACAGCCCCAGCTCCCCAGACCCAGACACACCA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATGGAGATGGTGTGTCTaGGTCTGGGGAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRWRWCV*VWGAGA
Trigger: AGCCCCAGCTCCCCAGACCCAGACACACCATCTCCA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRCVCFG*LAGLGC
Trigger: ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSKLLPA*AGVCFL
Trigger: GAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGACAGCAGCAGCCCATaGTTGGGACGGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCDSSSP*LGRRQG
Trigger: GCCCTGCCTCCGTCCCAACCATGGGCTGCTGCTGTC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTAGACATGCACTGAAGTaGAGAGGGAGTGACAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPRHALK*RGSDSS
Trigger: GCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGACCCCAGAGGTGGAGCTaGGAGCTGAGGGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRPQRWS*ELREQQ
Trigger: TTGCTGTTCCCTCAGCTCCCAGCTCCACCTCTGGGG...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGACCCATTCCCAAGCCTaGCCTCTCTTTAAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGTHSQA*PLFKSL
Trigger: GAGACTTTTAAAGAGAGGCCAGGCTTGGGAATGGGT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGAGGTATGGCAGGGAGTaGGGCAGAGGAAAAATACCT +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWRYGRE*GRGKIP
Trigger: AGGTATTTTTCCTCTGCCCCACTCCCTGCCATACCT...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAAGGTCTCCTCATACTaGGGCAGCTCCACATATGTG +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEKVSSY*GSSTYV
Trigger: CACATATGTGGAGCTGCCTCAGTATGAGGAGACCTT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAAGCTGCAGCCACTTCTaGAGGGCCTCTGGAGCATAC +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRSCSHF*RASGAY
Trigger: GTATGCTCCAGAGGCCCTTCAGAAGTGGCTGCAGCT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCAAACAGAACCACTGTaGGTGGGGTGGAACAGATCT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSQTEPL*VGWNRS
Trigger: AGATCTGTTCCACCCCACTCACAGTGGTTCTGTTTG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTCAAACAGAACCACTGTaGGTGGGGTGGAACAGATCT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSQTEPL*VGWNRS
Trigger: AGATCTGTTCCACCCCACTCACAGTGGTTCTGTTTG...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTGGTGGGTTGTTCTCTaGGAATTGGTTTCACTCCCC +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPWWVVL*ELVSLP
Trigger: GGGGAGTGAAACCAATTCTCAGAGAACAACCCACCA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAATCCCCCAAGCTCTCTaGATGCCCAGGCATCACAGC +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRIPQAL*MPRHHS
Trigger: GCTGTGATGCCTGGGCATTCAGAGAGCTTGGGGGAT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTCGGCAAAACTCTGCTaGAGTGGACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSAKLC*SGLLRV
Trigger: AACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAAATTCGGCAAAACTCTaGTGCAGTGGACTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQNSAKL*CSGLLR
Trigger: TCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGAATT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAATTCGGCAAAACTCTaGTGCAGTGGACTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGNSAKL*CSGLLR
Trigger: TCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGAATT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGTGGATGTTACGGACTaGCTCGAAGCTGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSVDVTD*LEAEFL
Trigger: GAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCAC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GTGGACCCCCTCGATCAGCCGGTGGCTGCCATTGGAAGTCATGGCATTGAGAGCACCTCGCTCAGTGCTTaGTTAGCTGTTAGAATTTTA +
Preference number: 4 (lower is better)
Translates to: VDPLDQPVAAIGSHGIESTSLSA*LAVRIL
Trigger: TAAAATTCTAACAGCTAAGCAAGCACTGAGCGAGGT...GCTCTCAATGCCATGACTTCCAATGGCAGCCACCGGCTGATCGAGGGGGTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTACTGCCACCCCATCCTaGCTACTTCTTAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPTATPS*LLLKRL
Trigger: AAGCCTCTTAAGAAGTAGGCAGGATGGGGTGGCAGT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTACTGCCACCCCATCCTaGCTACTTCTTAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSTATPS*LLLKRL
Trigger: AAGCCTCTTAAGAAGTAGGCAGGATGGGGTGGCAGT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGACAGCAACTAAGACATaGACTGAAGTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWTATKT*TEVERE
Trigger: CTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGT...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAACAGCAACTAAGACATaGACTGAAGTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGTATKT*TEVERE
Trigger: CTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTCTGGCATCCACTCATaGTCCAATGAACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSGIHS*SNEQMP
Trigger: AGGCATCTGTTCATTGGAGCATGAGTGGATGCCAGA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTCTGGCATCCACTCATaGTCCAATGAACAGATGCCT +
Preference number: 4 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWSGIHS*SNEQMP
Trigger: AGGCATCTGTTCATTGGAGCATGAGTGGATGCCAGA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCTAACAAGGGGAATATaGAGCGTAGGCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGLTRGI*SVGTWE
Trigger: TTCCCAAGTGCCTACGCTGCATATTCCCCTTGTTAG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGTGCGGGAGGAGGGCTaGCTCCTCAGGTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCVREEG*LLRSNS
Trigger: ACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCAC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTCGTCCATCAGTTTGTaGATGTTACGGACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSSISL*MLRTAS
Trigger: CGAGGCAGTCCGTAACATCCACAAACTGATGGACGA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGCATCCACATCACCATTaGCATCATCGTCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGHPHHH*HHRPSV
Trigger: AACTGATGGACGATGATGCCAATGGTGATGTGGATG...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSSAYF*RLRSFS
Trigger: TGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGGGTTGTTGACAATCTaGAAGCCACAGAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSGLLTI*KPQRIS
Trigger: CGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKSQAML*LRQALP
Trigger: CGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATCTTCCGGCCTGGGCTaGAGTCTGTTTCCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRSSGLG*SLFPRQ
Trigger: TTGGCGAGGAAACAGACTCCAGCCCAGGCCGGAAGA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAACCCATTCCCAAGCCTaGCCTCTCTTTAAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQTHSQA*PLFKSL
Trigger: GAGACTTTTAAAGAGAGGCCAGGCTTGGGAATGGGT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAACCCATTCCCAAGCCTaGCCTCTCTTTAAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGTHSQA*PLFKSL
Trigger: GAGACTTTTAAAGAGAGGCCAGGCTTGGGAATGGGT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGGTATGGCAGGGAGTaGGGCAGAGGAAAAATACCT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSRYGRE*GRGKIP
Trigger: AGGTATTTTTCCTCTGCCCCACTCCCTGCCATACCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAGGTATGGCAGGGAGTaGGGCAGAGGAAAAATACCT +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGERYGRE*GRGKIP
Trigger: AGGTATTTTTCCTCTGCCCCACTCCCTGCCATACCT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCAGGCAGCATACTGCATaGACAAGGGAGACACAATCT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATRQHTA*TRETQS
Trigger: AGATTGTGTCTCCCTTGTCCATGCAGTATGCTGCCT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS-3UTR TCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATT +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEFSSSL*HRGLSI
Trigger: AATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAA...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSFSSSL*HRGLSI
Trigger: AATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp CTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCTTCTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATT +
Preference number: 4 (lower is better)
Translates to: LESVSSPIEPLSSSATAFFSSSL*HRGLSI
Trigger: AATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAA...GAAGGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPFSSSL*HRGLSI
Trigger: AATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAATGAAGTCCTTGAGGTaGTTATGGCGAGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQMKSLR*LWRVKR
Trigger: TCTCTTGACTCGCCATAATCACCTCAAGGACTTCAT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCATGAAGTCCTTGAGGTaGTTATGGCGAGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATMKSLR*LWRVKR
Trigger: TCTCTTGACTCGCCATAATCACCTCAAGGACTTCAT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCEGSHQ*VDARVV
Trigger: AACAACCCTGGCATCCACTCACTGGTGGCTGCCCTC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGATGGGTCAAATCCCTCTaGGATCCCAGGCCATGCTGT +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRWVKSL*DPRPCC
Trigger: ACAGCATGGCCTGGGATCTCAGAGGGATTTGACCCA...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300737.8
ENST00000526596.2
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCGTAGCCTTCAGAACTaGAAGACTGTCCAGATGAAA +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGRSLQN*KTVQMK
Trigger: TTTCATCTGGACAGTCTTTCAGTTCTGAAGGCTACG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAGGCTCTGGCCCTGGTaGAGGAGGAGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKRLWPW*RRSPQR
Trigger: CCTCTGGGGACTCCTCCTGCACCAGGGCCAGAGCCT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGGTTGGGGCGTGTACTaGCCATCCAGCTGGGGTCTA +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCGWGVY*PSSWGL
Trigger: TAGACCCCAGCTGGATGGGCAGTACACGCCCCAACC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGGCTCCGTCAGGCGCTaGCGAACACTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKGSVRR*RTLLCR
Trigger: CCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTACAGCAACTAAGACATaGACTGAAGTGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSTATKT*TEVERE
Trigger: CTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCTAACAAGGGGAATATaGAGCGTAGGCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPLTRGI*SVGTWE
Trigger: TTCCCAAGTGCCTACGCTGCATATTCCCCTTGTTAG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCCAAGTGCTCCAAGTTTaGGTGCGGGAGGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCQVLQV*VREEGW
Trigger: CCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTG...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTGGACTCCTCAGAGTTaGCCCCCGAGCTGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCWTPQS*PPSWFL
Trigger: CAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGGTGACAGCCAGCCTTaGCATGGCATGGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCGDSQP*HGMATE
Trigger: CTCAGTGGCCATGCCATGCCAAGGCTGGCTGTCACC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPSSAYF*RLRSFS
Trigger: TGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSSSAYF*RLRSFS
Trigger: TGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTGCGTGTGTTTCGGCTaGCTTGCAGGGCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCCVCFG*LAGLGC
Trigger: ACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCCCTGTATCATGGCTGTaGCTCTCCTGGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCPVSWL*LSWPGE
Trigger: CTCCCCTGGCCAGGAGAGCCACAGCCATGATACAGG...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTCCTTTTTGAGCCTCTaGCCAAGGCTACAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSFLSL*PRLQSN
Trigger: GTTACTTTGTAGCCTTGGCCAGAGGCTCAAAAAGGA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAGCAGCAGAGGCAGATaGAGAGCTGGTCCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSSRGR*RAGPVA
Trigger: GGCTACGGGACCAGCTCTCCATCTGCCTCTGCTGCT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTCATGGTGGTGTTGGTaGCAGCCAGCCTTGGCATGG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSWWCW*QPALAW
Trigger: CCATGCCAAGGCTGGCTGTCACCAACACCACCATGA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCATGAAGTCCTTGAGGTaGTTATGGCGAGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSMKSLR*LWRVKR
Trigger: TCTCTTGACTCGCCATAATCACCTCAAGGACTTCAT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAGCTGGGGTCTATGTTaGGGGCAGCCACCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSWGLC*GQPPVS
Trigger: ACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAGTAGAGAGAAAAAGTaGCTGCCTTATAACCTACAG +
Preference number: 4 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSSREKK*LPYNLQ
Trigger: CTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTACT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGGGCTACAAAGTAACATaGAAATGGGATCTAACAAGG +
Preference number: 4 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQGYKVT*KWDLTR
Trigger: CCTTGTTAGATCCCATTTTCATGTTACTTTGTAGCC...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTCATGGTGGTGTTGGTaGCAGCCAGCCATTTATAAA +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSWWCW*QPAIYK
Trigger: TTTATAAATGGCTGGCTGTCACCAACACCACCATGA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533977.5
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTGCTCCAAGTTTGGGTaGGGGAGGAGGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKCSKFG*GRRAGS
Trigger: GGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAAGCCGCTGGGCTTCCTaGTTAGCAAGGTTGATCTCA +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRSRWAS*LARLIS
Trigger: TGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKALPQC*CHLAQC
Trigger: GCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCCAGCCAGGTGGGGAATaGGTGTGTTTCGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCQPGGE*VCFGWL
Trigger: AAGCCAGCCGAAACACACGCATTCCCCACCTGGCTG...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCCAGCCATTTATAAATaGATTTCCTGTGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSPAIYK*ISCAAQ
Trigger: CTGGGCTGCACAGGAAATGCATTTATAAATGGCTGG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533977.5
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCATCCACATCACCATTaGCATCATCGTCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPHPHHH*HHRPSV
Trigger: AACTGATGGACGATGATGCCAATGGTGATGTGGATG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCATCCACATCACCATTaGCATCATCGTCCATCAGTT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSHPHHH*HHRPSV
Trigger: AACTGATGGACGATGATGCCAATGGTGATGTGGATG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSAVFHC*VMVIEV
Trigger: GACCTCAATTACCATGACCCAACAGTGAAACACAGC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEAVFHC*VMVIEV
Trigger: GACCTCAATTACCATGACCCAACAGTGAAACACAGC...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCTTCAGCTTATCCTCACCATaGAAGGTGCTGTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: LESVSSPIEPLSSSATAFSLSSP*KVLCFT
Trigger: AGTGAAACACAGCACCTTCCATGGTGAGGATAAGCT...GAAGGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CCA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCTTATCCTCACCATaGAAGGTGCTGTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSLSSP*KVLCFT
Trigger: AGTGAAACACAGCACCTTCCATGGTGAGGATAAGCT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAGCCTTGGCATGGCATaGCCACTGAGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSLGMA*PLSCSF
Trigger: GAAGCTGCAGCTCAGTGGCCATGCCATGCCAAGGCT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAATCTTCATGTGCTCCTTaGAGTAACGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQSSCAP*SNGSGY
Trigger: ATATCCAGAACCGTTACTCCAAGGAGCACATGAAGA...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCTCTTCATGTGCTCCTTaGAGTAACGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATSSCAP*SNGSGY
Trigger: ATATCCAGAACCGTTACTCCAAGGAGCACATGAAGA...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCTTCATGTGCTCCTTaGAGTAACGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSSCAP*SNGSGY
Trigger: ATATCCAGAACCGTTACTCCAAGGAGCACATGAAGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGCCTTGTCCAGCCCATaGTTCAGCGCCAGTAATGCC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCALSSP*FSASNA
Trigger: GGCATTACTGGCGCTGAACCATGGGCTGGACAAGGC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAAGGAGTATTGATGCTTaGGGAGCTTTGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRRSIDA*GALGQH
Trigger: GTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTGGCTGTGGCTCTCCTaGCCAGGGGAGCCACTTGTC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKWLWLS*PGEPLV
Trigger: GACAAGTGGCTCCCCTGGCCAGGAGAGCCACAGCCA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTCCTTTTTGAGCCTCTaGCCAAGGCTACAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGESFLSL*PRLQSN
Trigger: GTTACTTTGTAGCCTTGGCCAGAGGCTCAAAAAGGA...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAAGTAGAGAGAAAAAGTaGCTGCCTTATAACCTACAG +
Preference number: 4 (lower is better)
Translates to: GEWWEGGARKQETETRNQSREKK*LPYNLQ
Trigger: CTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTACT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGGGAGCCACTTGTCCTaGGCCCTAGGAGTATTGATG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCGSHLS*ALGVLM
Trigger: CATCAATACTCCTAGGGCTCAGGACAAGTGGCTCCC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGGCTACAAAGTAACATaGAAATGGGATCTAACAAGG +
Preference number: 4 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGGYKVT*KWDLTR
Trigger: CCTTGTTAGATCCCATTTTCATGTTACTTTGTAGCC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTAACTGTCATGTCATATaGCCCAGTGATTCTGGGATT +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSNCHVI*PSDSGI
Trigger: AATCCCAGAATCACTGGGTCATATGACATGACAGTT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533977.5
CDS-3UTR GCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAGTGGATGTTACGGACTaGCTCGAAGCTGAGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRVDVTD*LEAEFL
Trigger: GAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCAC...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGACCTCACCATGGAAGGTaGTGTGTTTCACTGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRPHHGR*CVSLLG
Trigger: ACCCAACAGTGAAACACAGCACCTTCCATGGTGAGG...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGCATGGCCACTGAGCTaGAGCTTCCGGAAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKAWPLS*SFRKVS
Trigger: GGAGACCTTCCGGAAGCTGCAGCTCAGTGGCCATGC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCACCTCGCTCAGTGCTTaGTTAGCTGTTAGAATTTTA +
Preference number: 4 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATTSLSA*LAVRIL
Trigger: TAAAATTCTAACAGCTAAGCAAGCACTGAGCGAGGT...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGATCTGTTGCCAGCGGTaGAGGCGCTCCCGCAATGCT +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKICCQR*RRSRNA
Trigger: AGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGAT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCATTGAGAGCCTCGTCTaGAGCACGGCTCATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCIESLV*STAHLR
Trigger: CCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAAT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGGAGGAAATAGGAAGTaGTGTGGTGGTAATAAACAG +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPGGNRK*CGGNKQ
Trigger: CTGTTTATTACCACCACAGCACTTCCTATTTCCTCC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAGGGTTGTTGACAATCTaGAAGCCACAGAGGATCTCG +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRGLLTI*KPQRIS
Trigger: CGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCC...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTATAACCTACAGTTCTaGCATCCACTCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPYNLQF*HPLMLQ
Trigger: TTGGAGCATGAGTGGATGCCAGAACTGTAGGTTATA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGGACTGCCTCGAAGCTaGGTTTCTCATCCTCACTGT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCGLPRS*VSHPHC
Trigger: ACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTGGTTGTGTCCTTTTTaGGCCTCTGGCCAAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCWLCPF*ASGQGY
Trigger: GTAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTACCTCGCTCAGTGCTTaGTTAGCTGTTAGAATTTTA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSTSLSA*LAVRIL
Trigger: TAAAATTCTAACAGCTAAGCAAGCACTGAGCGAGGT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGACCTCGCTCAGTGCTTaGTTAGCTGTTAGAATTTTA +
Preference number: 4 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGETSLSA*LAVRIL
Trigger: TAAAATTCTAACAGCTAAGCAAGCACTGAGCGAGGT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAACATGCGTCTGATGTaGACACCTCGGGATCCCAGA +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCNMRLM*TPRDPR
Trigger: TCTGGGATCCCGAGGTGTCCACATCAGACGCATGTT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAGCCTTGGCATGGCATaGCCACTGAGCTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKSLGMA*PLSCSF
Trigger: GAAGCTGCAGCTCAGTGGCCATGCCATGCCAAGGCT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCKLLPA*AGVCFL
Trigger: GAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGGTTTCACTCCCCCATaGATCCCTGGAGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKGFTPP*IPGGLS
Trigger: ACTCAGGCCTCCAGGGATCCATGGGGGAGTGAAACC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAGAGGGAGGCAGGTGTaGGTGGGAGTAGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCRGRQV*VGVERK
Trigger: TTTTCTCTCTACTCCCACCCACACCTGCCTCCCTCT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAGGAGTATTGATGCTTaGGGAGCTTTGGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCRSIDA*GALGQH
Trigger: GTGCTGCCCCAAAGCTCCCCAAGCATCAATACTCCT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAAGGGTGGGGGAAAGTaGTCACACAGCCGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKKGGGK*SHSRLH
Trigger: GTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTGCTGTTAGAATTTTATaGTCTACATCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPAVRIL*STSSRE
Trigger: TTCCCTGGATGATGTAGATCATAAAATTCTAACAGC...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGCTGTTAGAATTTTATaGTCTACATCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SWELREQQLRHALKWRGSAVRIL*STSSRE
Trigger: TTCCCTGGATGATGTAGATCATAAAATTCTAACAGC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGCAGCCAAAGGTCAAGTaGTCCAAGTTTGGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKQPKVK*SKFGCG
Trigger: CCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTG...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ACAAGAAACCAAACCTCAAAACTGGGACAGCAGAGACAGAAGCTGAACCCCAGAAGCTTATCCTCACCATaGAAGGTGCTGTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: TRNQTSKLGQQRQKLNPRSLSSP*KVLCFT
Trigger: AGTGAAACACAGCACCTTCCATGGTGAGGATAAGCT...TCTGGGGTTCAGCTTCTGTCTCTGCTGTCCCAGTTTTGAGGTTTGGTTTCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTTCTTGCCAGCCAGGTaGGGAATGCGTGTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKFLPAR*GMRVFR
Trigger: CCGAAACACACGCATTCCCCACCTGGCTGGCAAGAA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGCCCTAGCCCCAGTCTaGAGCAAACAGAACCACTGT +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKALAPV*SKQNHC
Trigger: ACAGTGGTTCTGTTTGCTCCAGACTGGGGCTAGGGC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAAGAGCCCTGTATCATaGCTGTGGCTCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKKSPVS*LWLSWP
Trigger: TGGCCAGGAGAGCCACAGCCATGATACAGGGCTCTT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGGATGCCAGGGTTGTTaGCAATCTGGAAGCCACAGA +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKGCQGC*QSGSHR
Trigger: TCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGGGCCACGTGGAAGGTaGCAAAGAGTGTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKGPRGR*QRVCFS
Trigger: AGAGAAACACACTCTTTGGCACCTTCCACGTGGCCC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAAACTTCTTCCGGCCTaGGCTGGAGTCTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKKLLPA*AGVCFL
Trigger: GAGGAAACAGACTCCAGCCCAGGCCGGAAGAAGTTT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAGAGGGAGGCAGGTGTaGGTGGGAGTAGAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKRGRQV*VGVERK
Trigger: TTTTCTCTCTACTCCCACCCACACCTGCCTCCCTCT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGACTCCGAATCGGAATaGGTCAAATCCCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKDSESE*VKSPKL
Trigger: GAGCTTGGGGGATTTGACCCATTCCGATTCGGAGTC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTCGGCAAAACTCTGCTaGAGTGGACTCCTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKSAKLC*SGLLRV
Trigger: AACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGACTGCCACCCCATCCTaGCTACTTCTTAAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKTATPS*LLLKRL
Trigger: AAGCCTCTTAAGAAGTAGGCAGGATGGGGTGGCAGT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTCGTCCATCAGTTTGTaGATGTTACGGACTGCCTCG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKSSISL*MLRTAS
Trigger: CGAGGCAGTCCGTAACATCCACAAACTGATGGACGA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCAVFHC*VMVIEV
Trigger: GACCTCAATTACCATGACCCAACAGTGAAACACAGC...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCAGCTTATCCTCACCATaGAAGGTGCTGTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSLSSP*KVLCFT
Trigger: AGTGAAACACAGCACCTTCCATGGTGAGGATAAGCT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTCCTTTTTGAGCCTCTaGCCAAGGCTACAAAGTAAC +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSFLSL*PRLQSN
Trigger: GTTACTTTGTAGCCTTGGCCAGAGGCTCAAAAAGGA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCTCTTCATGTGCTCCTTaGAGTAACGGTTCTGGATAT +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCSSCAP*SNGSGY
Trigger: ATATCCAGAACCGTTACTCCAAGGAGCACATGAAGA...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGATGAAGTCCTTGAGGTaGTTATGGCGAGTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKMKSLR*LWRVKR
Trigger: TCTCTTGACTCGCCATAATCACCTCAAGGACTTCAT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR GCA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCACCTCGCTCAGTGCTTaGTTAGCTGTTAGAATTTTA +
Preference number: 4 (lower is better)
Translates to: VERKSDCLITYSSGIHSCTSLSA*LAVRIL
Trigger: TAAAATTCTAACAGCTAAGCAAGCACTGAGCGAGGT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTATAACCTACAGTTCTaGCATCCACTCATGCTCCAA +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKYNLQF*HPLMLQ
Trigger: TTGGAGCATGAGTGGATGCCAGAACTGTAGGTTATA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR TCA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGGCTACAAAGTAACATaGAAATGGGATCTAACAAGG +
Preference number: 4 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKGYKVT*KWDLTR
Trigger: CCTTGTTAGATCCCATTTTCATGTTACTTTGTAGCC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp CTAGGCCGAGGTCAGCGCCCCCGCCCAGTCCCGTGCCCAGGCGGCTaGCGGTGCCCAGGTCCAGCAGGCGGACGCACACCGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LGRGQRPRPVPCPGG*RCPGPAGGRTPARP
Trigger: GGGCCTGGCCGGTGTGCGTCCGCCTGCTGGACCTGGGCACCGCCAGCCGCCTGGGCACGGGACTGGGCGGGGGCGCTGACCTCGGCCTAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS GCA 90 bp CGAGGTCAGCGCCCCCGCCCAGTCCCGTGCCCAGGCGGCTGGCGGTaGCCAGGTCCAGCAGGCGGACGCACACCGGCCAGGCCCAGGACA +
Preference number: 5 (lower is better)
Translates to: RGQRPRPVPCPGGWR*PGPAGGRTPARPRT
Trigger: TGTCCTGGGCCTGGCCGGTGTGCGTCCGCCTGCTGGACCTGGGCACCGCCAGCCGCCTGGGCACGGGACTGGGCGGGGGCGCTGACCTCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS TCA 90 bp CGGCGAGCAGCAGAAGCTGGGGAGGGCGTGCGACCCGCAGGGTCCTaGGGGCGCGGGCGTCTCCGGGATCCTGGGCCTCCTAGGCCGAGG +
Preference number: 5 (lower is better)
Translates to: RRAAEAGEGVRPAGS*GRGRLRDPGPPRPR
Trigger: CCTCGGCCTAGGAGGCCCAGGATCCCGGAGACGCCCGCGCCCTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTTCTGCTGCTCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 90 bp ATCCTGGGCCTCCTAGGCCGAGGTCAGCGCCCCCGCCCAGTCCCGTaGCCAGGCGGCTGGCGGTGCCCAGGTCCAGCAGGCGGACGCACA +
Preference number: 5 (lower is better)
Translates to: ILGLLGRGQRPRPVP*PGGWRCPGPAGGRT
Trigger: TGTGCGTCCGCCTGCTGGACCTGGGCACCGCCAGCCGCCTGGGCACGGGACTGGGCGGGGGCGCTGACCTCGGCCTAGGAGGCCCAGGAT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS CCA 90 bp GGGCACCTGACCTCGCCCTGCCGAAGAGCGGCGAGCAGCAGAAGCTaGGGAGGGCGTGCGACCCGCAGGGTCCTGAGGGCGCGGGCGTCT +
Preference number: 5 (lower is better)
Translates to: GHLTSPCRRAASSRS*GGRATRRVLRARAS
Trigger: AGACGCCCGCGCCCTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTTCTGCTGCTCGCCGCTCTTCGGCAGGGCGAGGTCAGGTGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 90 bp GGAGGAGGGCTGGCTCCTCAGGTCCAACAGTGGGTCCGCCGGGGCTaGGGCGGCCTGAGCTCGTGCCGCTTCCGGAGACTTCGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGGLAPQVQQWVRRG*GGLSSCRFRRLRAG
Trigger: CCCTGCCCGAAGTCTCCGGAAGCGGCACGAGCTCAGGCCGCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp CCAAGTTTGGGTGCGGGAGGAGGGCTGGCTCCTCAGGTCCAACAGTaGGTCCGCCGGGGCTGCGGCGGCCTGAGCTCGTGCCGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: PSLGAGGGLAPQVQQ*VRRGCGGLSSCRFR
Trigger: CCGGAAGCGGCACGAGCTCAGGCCGCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 90 bp TGTGGACACCTCGGGATCCCAGAGGCAAAGCCAGGAGCCCGGGAGTaGAGCCGACGGTCTCCAGGCAAGATGCCCTCGCGGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: CGHLGIPEAKPGARE*SRRSPGKMPSRLRS
Trigger: GCTGCGGAGCCGCGAGGGCATCTTGCCTGGAGACCGTCGGCTGCACTCCCGGGCTCCTGGCTTTGCCTCTGGGATCCCGAGGTGTCCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp TGCGGCGGCCTGAGCTCGTGCCGCTTCCGGAGACTTCGGGCAGGGTaGCTGCGGGGCTGCTGTCAGCTCCGCAGATTACTACACCCCTGC +
Preference number: 5 (lower is better)
Translates to: CGGLSSCRFRRLRAG*LRGCCQLRRLLHPC
Trigger: GCAGGGGTGTAGTAATCTGCGGAGCTGACAGCAGCCCCGCAGCCACCCTGCCCGAAGTCTCCGGAAGCGGCACGAGCTCAGGCCGCCGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp ACAGCCAAAGGTCAAGTGCTCCAAGTTTGGGTGCGGGAGGAGGGCTaGCTCCTCAGGTCCAACAGTGGGTCCGCCGGGGCTGCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: TAKGQVLQVWVREEG*LLRSNSGSAGAAAA
Trigger: GGCCGCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 90 bp GCCTGCCCCCTCCAACAGCCAAAGGTCAAGTGCTCCAAGTTTGGGTaGGGGAGGAGGGCTGGCTCCTCAGGTCCAACAGTGGGTCCGCCG +
Preference number: 5 (lower is better)
Translates to: ACPLQQPKVKCSKFG*GRRAGSSGPTVGPP
Trigger: CGGCGGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGTTGGAGGGGGCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 90 bp TCCAGCCACCCGCGAGCCTGCCCCCTCCAACAGCCAAAGGTCAAGTaGTCCAAGTTTGGGTGCGGGAGGAGGGCTGGCTCCTCAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SSHPRACPLQQPKVK*SKFGCGRRAGSSGP
Trigger: TGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGTTGGAGGGGGCAGGCTCGCGGGTGGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp GCCAGCCTCGCCCTCTACCAACCTCTGAGATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCGAACACTGCTCTGCAGGCTAGGGGA +
Preference number: 5 (lower is better)
Translates to: ASLALYQPLRSQAML*LRQALPNTALQARG
Trigger: TCCCCTAGCCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGATCTCAGAGGTTGGTAGAGGGCGAGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS TCA 90 bp TGGCCCCCGAGCTGGTTCCTGTCGCCTTCTCACTGTGACTATGGCTaGGGCTCTGGCCCTGGTGCAGGAGGAGTCCCCAGAGGAGCCACA +
Preference number: 5 (lower is better)
Translates to: WPPSWFLSPSHCDYG*GSGPGAGGVPRGAT
Trigger: TGTGGCTCCTCTGGGGACTCCTCCTGCACCAGGGCCAGAGCCTCAGCCATAGTCACAGTGAGAAGGCGACAGGAACCAGCTCGGGGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS CCA 90 bp GCGAGCCTGCCCCCTCCAACAGCCAAAGGTCAAGTGCTCCAAGTTTaGGTGCGGGAGGAGGGCTGGCTCCTCAGGTCCAACAGTGGGTCC +
Preference number: 5 (lower is better)
Translates to: ASLPPPTAKGQVLQV*VREEGWLLRSNSGS
Trigger: GGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGTTGGAGGGGGCAGGCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGTCCCCTGTCATGGTGGTGTaGGTGACAGCCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: PARWGMRVFRLACRARLSPVMVV*VTASLG
Trigger: GCCAAGGCTGGCTGTCACCAACACCACCATGACAGG...GGACAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS TCA 90 bp GAGGAGGAAGAGAAGAGAAGAGAAGAGAGGCGAGAAGGGGGCACCTaGCCTCGCCCTGCCGAAGAGCGGCGAGCAGCAGAAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: EEEEKRREERREGGT*PRPAEERRAAEAGE
Trigger: CTCCCCAGCTTCTGCTGCTCGCCGCTCTTCGGCAGGGCGAGGTCAGGTGCCCCCTTCTCGCCTCTCTTCTCTTCTCTTCTCTTCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TGCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGCAGCTGGGGTCTATGTaGAGGGCAGCCACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: CRARLSPTGDGVSGSGELQLGSM*RAATSE
Trigger: CTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTG...CAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp TTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGCTGATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LPARWGMRVFRLACRARLIRLWA*SSPWFS
Trigger: GCTGAACCATGGGCTGGACAAGGCCCACAGCCTGAT...CAGCCGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS CCA 90 bp CGAATCGGAATGGGTCAAATCCCTCTGAGATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCGAACACTGCTCTGCAGGCTAGGGGC +
Preference number: 5 (lower is better)
Translates to: RIGMGQIPLRSQAML*LRQALPNTALQARG
Trigger: GCCCCTAGCCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGATCTCAGAGGGATTTGACCCATTCCGATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526156.1
ENST00000526596.2
CDS-3UTR CAA 90 bp GCAGGGCTCGGCTGTCCCCAACTGGAGATGGTGTGTCTGGGTCTGGGGAGCTGGAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: AGLGCPQLEMVCLGLGSWSRWLP*EVMALR
Trigger: TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCT...CCAGCTCCCCAGACCCAGACACACCATCTCCAGTTGGGGACAGCCGAGCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS GCA 90 bp CCCAGGCCATGCTGTGGCTCCGTCAGGCGCTGCCGAACACTGCTCTaGAGGCTAGGGGCTGCAAGGAGAATAAAGAAAGTGTCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: PRPCCGSVRRCRTLL*RLGAARRIKKVSGG
Trigger: CCCTCCTGACACTTTCTTTATTCTCCTTGCAGCCCCTAGCCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526156.1
CDS CCA 90 bp CGAATCGGAATGGGTCAAATCCCTCTGAGATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCGAACACTGCTCTGCAGGCTAGGGGA +
Preference number: 5 (lower is better)
Translates to: RIGMGQIPLRSQAML*LRQALPNTALQARG
Trigger: TCCCCTAGCCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGATCTCAGAGGGATTTGACCCATTCCGATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000531332.1
ENST00000533977.5
CDS-3UTR CAA 90 bp AGCCTCGTCTGCAGCACGGCTCATCTGAGGAGGTTTGGGGGCCACACGCTGGCGTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SLVCSTAHLRRFGGHTLASCLAR*ISSRSF
Trigger: GAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGA...CGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS TCA 90 bp TTGGAAGTCATGGCATTGAGAGCCTCGTCTGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACACGCTGGCGGTCACTCATGTGGAGG +
Preference number: 5 (lower is better)
Translates to: LEVMALRASSAARLI*GGLGATRWRSLMWR
Trigger: CCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526156.1
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533977.5
ENST00000616714.4
CDS GCA 90 bp CCAGGGTTGTTGACAATCTGGAAGCCACAGAGGATCTCGATCTGTTaGCAGCGGTGCAGGCGCTCCCGCAATGCTGCTGTCACCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PGLLTIWKPQRISIC*QRCRRSRNAAVTSL
Trigger: GAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS GCA 90 bp CCAGCGGTGCAGGCGCTCCCGCAATGCTGCTGTCACCTCGCTCAGTaGTTGCCTGAAGACAGAGGAAAGAGAACTGCAGGCATGGACTTG +
Preference number: 5 (lower is better)
Translates to: PAVQALPQCCCHLAQ*LPEDRGKRTAGMDL
Trigger: CAAGTCCATGCCTGCAGTTCTCTTTCCTCTGTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS-3UTR CAA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGTGGACTCCTCAGAGTaGGCCCCCGAGCTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSVDSSE*APELVP
Trigger: AGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCAC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp GCAGGCGCTCCCGCAATGCTGCTGTCACCTCGCTCAGTGCTTGCCTaGAGACAGAGGAAAGAGAACTGCAGGCATGGACTTGGTGTGAGC +
Preference number: 5 (lower is better)
Translates to: AGAPAMLLSPRSVLA*RQRKENCRHGLGVS
Trigger: GCTCACACCAAGTCCATGCCTGCAGTTCTCTTTCCTCTGTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS GCA 90 bp GAGGATCTCGATCTGTTGCCAGCGGTGCAGGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGCTTGCCTGAAGACAGAGGAAAGAGA +
Preference number: 5 (lower is better)
Translates to: EDLDLLPAVQALPQC*CHLAQCLPEDRGKR
Trigger: TCTCTTTCCTCTGTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS GCA 90 bp ACAGAGGATCTCGATCTGTTGCCAGCGGTGCAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAGTGCTTGCCTGAAGACAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TEDLDLLPAVQALPQ*CCHLAQCLPEDRGK
Trigger: CTTTCCTCTGTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS CCA 90 bp CGGCTCCGCTCATTCTCAGTACCCTCCCGCAGCTCCTTCAGCCGCTaGGCTTCCTGCTTAGCAAGGTTGATCTCATCGCGCAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RLRSFSVPSRSSFSR*ASCLARLISSRSFF
Trigger: AAAGAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCTGCGGGAGGGTACTGAGAATGAGCGGAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS CCA 90 bp CTCAAGGCCTCCCGAACCTGCTCCAACTCCTCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCAGTACCCTCCCGCAGCTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LKASRTCSNSSSAYF*RLRSFSVPSRSSFS
Trigger: GCTGAAGGAGCTGCGGGAGGGTACTGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGTGGACTCCTCAGAGTaGGCCCCCGAGCTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATVDSSE*APELVP
Trigger: AGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCAC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGCAGCTGGGGTCTATGTaGAGGGCAGCCACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGQLGSM*RAATSE
Trigger: CTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTG...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp ACGGACGCATACATCCATGACTCTAGGTCTCAGTCAACATGCGTCTaGTGTGGACACCTCGGGATCCCAGAGGCAAAGCCAGGAGCCCGG +
Preference number: 5 (lower is better)
Translates to: TDAYIHDSRSQSTCV*CGHLGIPEAKPGAR
Trigger: CCGGGCTCCTGGCTTTGCCTCTGGGATCCCGAGGTGTCCACATCAGACGCATGTTGACTGAGACCTAGAGTCATGGATGTATGCGTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS TCA 90 bp AGGAGGGGCCAGCCCACTTTGGGCTGGCAGGTAAGGAGGTGCCCATaGATAAATGCTTGCTGGAGACCACCCTGGGCCTCTAATGCCAAT +
Preference number: 5 (lower is better)
Translates to: RRGQPTLGWQVRRCP*INACWRPPWASNAN
Trigger: ATTGGCATTAGAGGCCCAGGGTGGTCTCCAGCAAGCATTTATTCATGGGCACCTCCTTACCTGCCAGCCCAAAGTGGGCTGGCCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526156.1
CDS CCA 90 bp CTGCCCATCCAGCTGGGGTCTATGTTGAGGGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACAATCTGGAAGCCACAGAGGATCTCG +
Preference number: 5 (lower is better)
Translates to: LPIQLGSMLRAATSE*MPGLLTIWKPQRIS
Trigger: CGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTGGATGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCAAGTGCTCCAAGTTaGGGTGCGGGAGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSSAPS*GAGGGL
Trigger: CAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTCAAGTGCTCCAAGTTaGGGTGCGGGAGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWSSAPS*GAGGGL
Trigger: CAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGCCTGTCATGGTGGTGTaGGTGACAGCCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWPVMVV*VTASLG
Trigger: GCCAAGGCTGGCTGTCACCAACACCACCATGACAGG...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGAGTGGATGCCAGGGTaGTTGACAATCTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: HSLLASQVGNACVSAGLQEWMPG*LTIWKP
Trigger: TGGCTTCCAGATTGTCAACAACCCTGGCATCCACTC...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACAGCTGGGGTCTATGTaGAGGGCAGCCACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGQLGSM*RAATSE
Trigger: CTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp CACAGCCTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGTTGGAAGTCATGGCATaGAGAGCCTCGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: HSLLASQVGNACVSAGLQLEVMA*RASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA...CTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGIRLWA*SSPWFS
Trigger: GCTGAACCATGGGCTGGACAAGGCCCACAGCCTGAT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCGATGCTTGGGGAGCTTaGGGGCAGCACCTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSDAWGA*GQHLLE
Trigger: CTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATC...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp GCTTGTCAATTCGGCAAAACTCTGCTGCAGTGGACTCCTCAGAGTTaGCCCCCGAGCTGGTTCCTGTCGCCTTCTCACTGTGACTATGGC +
Preference number: 5 (lower is better)
Translates to: ACQFGKTLLQWTPQS*PPSWFLSPSHCDYG
Trigger: GCCATAGTCACAGTGAGAAGGCGACAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGAATTGACAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS CCA 90 bp TCCTGCTTAGCAAGGTTGATCTCATCGCGCAGCTTCTTTTCCAGATaGACCTTCTCCACCTCCACTGTGCGGTGCTCCTCCTGGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SCLARLISSRSFFSR*TFSTSTVRCSSWAL
Trigger: CAAGGCCCAGGAGGAGCACCGCACAGTGGAGGTGGAGAAGGTCCATCTGGAAAAGAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTCAAGTGCTCCAAGTTaGGGTGCGGGAGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPSSAPS*GAGGGL
Trigger: CAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CATGGCATTGAGAGCCTCGTCTGCAGCACGGCTCATCTGAGGAGGTTTGGGGGCTCATCGTCCATCAGTTaGTGGATGTTACGGACTGCC +
Preference number: 5 (lower is better)
Translates to: HGIESLVCSTAHLRRFGGSSSIS*WMLRTA
Trigger: GGCAGTCCGTAACATCCACAAACTGATGGACGATGA...GCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp CAGGCAGTTTCTCCACCAGAGACCCTGGGTGGACCCCCTCGATCAGCCGGTGGCTCATCCACGGTCCAATaGTATACTTCTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: QAVSPPETLGGPPRSAGGSSTVQ*YTSDDF
Trigger: GAAGTCATCAGAAGTATACAATTGGACCGTGGATGA...GCCACCGGCTGATCGAGGGGGTCCACCCAGGGTCTCTGGTGGAGAAACTGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCCTGTCATGGTGGTGTaGGTGACAGCCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: ELREQQLRHALKWRGSDSPVMVV*VTASLG
Trigger: GCCAAGGCTGGCTGTCACCAACACCACCATGACAGG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTCAGCTGGGGTCTATGTaGAGGGCAGCCACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: SWELREQQLRHALKWRGSQLGSM*RAATSE
Trigger: CTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTG...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: ELREQQLRHALKWRGSDSIRLWA*SSPWFS
Trigger: GCTGAACCATGGGCTGGACAAGGCCCACAGCCTGAT...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEIRLWA*SSPWFS
Trigger: GCTGAACCATGGGCTGGACAAGGCCCACAGCCTGAT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAGATGCTTGGGGAGCTTaGGGGCAGCACCTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGDAWGA*GQHLLE
Trigger: CTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATC...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp ATGGCATGGCCACTGAGCTGCAGCTTCCGGAAGGTCTCCTCATACTaGGGCAGCTCCACATATGTGATCAGCCACTGTACCACCTCATCC +
Preference number: 5 (lower is better)
Translates to: MAWPLSCSFRKVSSY*GSSTYVISHCTTSS
Trigger: GGATGAGGTGGTACAGTGGCTGATCACATATGTGGAGCTGCCTCAGTATGAGGAGACCTTCCGGAAGCTGCAGCTCAGTGGCCATGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000300737.8
ENST00000525403.5
ENST00000526596.2
ENST00000526771.5
ENST00000527484.5
ENST00000527651.5
ENST00000528656.5
ENST00000532610.5
ENST00000532919.5
ENST00000533445.1
ENST00000616714.4
CDS TCA 90 bp CCAAAGAGCACTGTATCCAGAGCCTTCAGCTGCAGCTTCTGCCGATaGCTCCGGTCTGTCATCTTCAGCACAGTCCCTGTCATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PKSTVSRAFSCSFCR*LRSVIFSTVPVMVV
Trigger: CACCACCATGACAGGGACTGTGCTGAAGATGACAGACCGGAGTCATCGGCAGAAGCTGCAGCTGAAGGCTCTGGATACAGTGCTCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000526771.5
ENST00000527484.5
ENST00000527651.5
ENST00000532610.5
ENST00000532919.5
ENST00000533445.1
ENST00000533977.5
ENST00000616714.4
CDS TCA 90 bp TGTACTGCCCATCCAGCTGGGGTCTATGTTGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTTGACAATCTGGAAGCCACAGAGGAT +
Preference number: 5 (lower is better)
Translates to: CTAHPAGVYVEGSHQ*VDARVVDNLEATED
Trigger: ATCCTCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTGGATGGGCAGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS TCA 90 bp CAGCAGCAGAGGCAGATGGAGAGCTGGTCCCGTAGCCTTCAGAACTaGAAGACTGTCCAGATGAAAGGCTGCGCATTCGCCGCAGAGATA +
Preference number: 5 (lower is better)
Translates to: QQQRQMESWSRSLQN*KTVQMKGCAFAAEI
Trigger: TATCTCTGCGGCGAATGCGCAGCCTTTCATCTGGACAGTCTTTCAGTTCTGAAGGCTACGGGACCAGCTCTCCATCTGCCTCTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS GCA 90 bp TCATTCTCAGTACCCTCCCGCAGCTCCTTCAGCCGCTGGGCTTCCTaGTTAGCAAGGTTGATCTCATCGCGCAGCTTCTTTTCCAGATGG +
Preference number: 5 (lower is better)
Translates to: SFSVPSRSSFSRWAS*LARLISSRSFFSRW
Trigger: CCATCTGGAAAAGAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCTGCGGGAGGGTACTGAGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS GCA 90 bp CAGCTACCTCTCTGGTGGAGGAGGTGTCAGCGACTTGAGAATGAGTaGGCCAAAGAAGACAGAGCCACGCCTGAGCCTCCTTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: QLPLWWRRCQRLENE*AKEDRATPEPPSTK
Trigger: CTTTGTTGAAGGAGGCTCAGGCGTGGCTCTGTCTTCTTTGGCGCACTCATTCTCAAGTCGCTGACACCTCCTCCACCAGAGAGGTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS GCA 90 bp AAGATAAGAACAATCAGGCCAGAGGTCCCTCCCCAAAGGCTGGGCTaGCTCGGACTCCCATCCCAAGCTACTGACCTTACTAGAGAGCCT +
Preference number: 5 (lower is better)
Translates to: KIRTIRPEVPPQRLG*LGLPSQATDLTREP
Trigger: AGGCTCTCTAGTAAGGTCAGTAGCTTGGGATGGGAGTCCGAGGCAGCCCAGCCTTTGGGGAGGGACCTCTGGCCTGATTGTTCTTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534707.1
CDS-3UTR CAA 90 bp TGTCCAGCCCATGGTTCAGCGCCAGTAATGCCTTCTTGGCCAGGGCAGGGCTGTACATCCACATCACCATaGGCATCATCGTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: CPAHGSAPVMPSWPGQGCTSTSP*ASSSIS
Trigger: ACTGATGGACGATGATGCCAATGGTGATGTGGATGT...ACAGCCCTGCCCTGGCCAAGAAGGCATTACTGGCGCTGAACCATGGGCTGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSSCLAR*ISSRSF
Trigger: GAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGA...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GGGCTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCCTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: GLESVSSPIEPLSSSATALLSIF*AAPLIL
Trigger: GAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAG...GGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTGGATGCCAGGGTTGTaGACAATCTGGAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGWMPGL*TIWKPQ
Trigger: CTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTTGGAAGTCATGGCATaGAGAGCCTCGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGLEVMA*RASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGTTGGAAGTCATGGCATaGAGAGCCTCGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQLEVMA*RASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: GEWWEGGARKQETETRNQSRWLP*EVMALR
Trigger: TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGAAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSRWLP*EVMALR
Trigger: TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCT...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp CTTCTTGCCAGCCAGGTGGGGAATGCGTGTGTTTCGGCTGGCTTGCAGGGCTCGGGCTTCTTAAAGATTTaGAGGGGAAACTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: LLASQVGNACVSAGLQGSGFLKI*RGNFFR
Trigger: CCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAGCC...CGAGCCCTGCAAGCCAGCCGAAACACACGCATTCCCCACCTGGCTGGCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCTGGTTGTGTCCTTTTaGAGCCTCTGGCCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQLVVSF*SLWPRL
Trigger: TAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCAG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGGAGCAGCACAGAAAACCCCATTaGAGGGTGTCCAGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: SFGAAPLRDKSSCSVGEQHRKPH*RVSREY
Trigger: GTACTCCCTGGACACCCTCAAATGGGGTTTTCTGTG...CTGCTCCCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp ACAATCTCCTCATCCATGTCATCCACGTCGTCAGTCATGATGAAGTaGGCAGGGTTGGGGCGTGTACTGCCCATCCAGCTGGGGTCTATG +
Preference number: 5 (lower is better)
Translates to: TISSSMSSTSSVMMK*AGLGRVLPIQLGSM
Trigger: CATAGACCCCAGCTGGATGGGCAGTACACGCCCCAACCCTGCTCACTTCATCATGACTGACGACGTGGATGACATGGATGAGGAGATTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGTCATCGTCCATCAGTTaGTGGATGTTACGGACTGCC +
Preference number: 5 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGSSSIS*WMLRTA
Trigger: GGCAGTCCGTAACATCCACAAACTGATGGACGATGA...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGSCLAR*ISSRSF
Trigger: GAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGCTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWLLSIF*AAPLIL
Trigger: GAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAG...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGLLSIF*AAPLIL
Trigger: GAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTGGATGCCAGGGTTGTaGACAATCTGGAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGWMPGL*TIWKPQ
Trigger: CTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATGGATGCCAGGGTTGTaGACAATCTGGAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGWMPGL*TIWKPQ
Trigger: CTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGTGGATGCCAGGGTTGTaGACAATCTGGAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWWMPGL*TIWKPQ
Trigger: CTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCA...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGAGTGGATGCCAGGGTaGTTGACAATCTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATEWMPG*LTIWKP
Trigger: TGGCTTCCAGATTGTCAACAACCCTGGCATCCACTC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCGAGTGGATGCCAGGGTaGTTGACAATCTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGEWMPG*LTIWKP
Trigger: TGGCTTCCAGATTGTCAACAACCCTGGCATCCACTC...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCTTGGAAGTCATGGCATaGAGAGCCTCGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGLEVMA*RASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAGCCGGTGGCTGCCATaGGAAGTCATGGCATTGAGA +
Preference number: 5 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGESRWLP*EVMALR
Trigger: TCTCAATGCCATGACTTCCAATGGCAGCCACCGGCT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TTGGGGAGCTTTGGGGCAGCACCTCTTAGAGACAAATCCTCCTGCAGTGTGGGGAAAATGACAGCATCCTaGCCCAACAACTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LGSFGAAPLRDKSSCSVGKMTAS*PNNSRA
Trigger: AGCCCTGGAGTTGTTGGGCAAGGATGCTGTCATTTT...CCCCACACTGCAGGAGGATTTGTCTCTAAGAGGTGCTGCCCCAAAGCTCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCCTGGTTGTGTCCTTTTaGAGCCTCTGGCCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGLVVSF*SLWPRL
Trigger: TAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCAG...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGACTGGTTGTGTCCTTTTaGAGCCTCTGGCCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGLVVSF*SLWPRL
Trigger: TAGCCTTGGCCAGAGGCTCAAAAAGGACACAACCAG...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGCACAGAAAACCCCATTaGAGGGTGTCCAGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWHRKPH*RVSREY
Trigger: GTACTCCCTGGACACCCTCAAATGGGGTTTTCTGTG...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp GCAGCTTCCGGAAGGTCTCCTCATACTGAGGCAGCTCCACATATGTaGTCAGCCACTGTACCACCTCATCCACGGTCCAATTGTATAGCC +
Preference number: 5 (lower is better)
Translates to: AASGRSPHTEAAPHM*SATVPPHPRSNCIA
Trigger: GGCTATACAATTGGACCGTGGATGAGGTGGTACAGTGGCTGATCACATATGTGGAGCTGCCTCAGTATGAGGAGACCTTCCGGAAGCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527484.5
CDS-3UTR CAA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAATCATCGTCCATCAGTTaGTGGATGTTACGGACTGCC +
Preference number: 5 (lower is better)
Translates to: GEWWEGGARKQETETRNQSSSIS*WMLRTA
Trigger: GGCAGTCCGTAACATCCACAAACTGATGGACGATGA...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ELREQQLRHALKWRGSDSSCLAR*ISSRSF
Trigger: GAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGA...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGESCLAR*ISSRSF
Trigger: GAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGA...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTCTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPLLSIF*AAPLIL
Trigger: GAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAG...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGCTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGELLSIF*AAPLIL
Trigger: GAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAG...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp CTGGAGTCTGTTTCCTCGCCAATAGAGCCATTATCCTCCTCAGCCACAGCCTTCTGGATGCCAGGGTTGTaGACAATCTGGAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: LESVSSPIEPLSSSATAFWMPGL*TIWKPQ
Trigger: CTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCA...GAAGGCTGTGGCTGAGGAGGATAATGGCTCTATTGGCGAGGAAACAGACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527651.5
CDS-3UTR CAA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCGAGTGGATGCCAGGGTaGTTGACAATCTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: ELREQQLRHALKWRGSDSEWMPG*LTIWKP
Trigger: TGGCTTCCAGATTGTCAACAACCCTGGCATCCACTC...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTTTGGAAGTCATGGCATaGAGAGCCTCGTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SWELREQQLRHALKWRGSLEVMA*RASSAA
Trigger: TGCTGCAGACGAGGCTCTCAATGCCATGACTTCCAA...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAAAAATGACAGCATCCTaGCCCAACAACTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: GEWWEGGARKQETETRNQKMTAS*PNNSRA
Trigger: AGCCCTGGAGTTGTTGGGCAAGGATGCTGTCATTTT...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCCCTGTCATGGTGGTGTaGGTGACAGCCAGCCATTTA +
Preference number: 5 (lower is better)
Translates to: ELREQQLRHALKWRGSDSPVMVV*VTASHL
Trigger: TAAATGGCTGGCTGTCACCAACACCACCATGACAGG...GCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533977.5
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTGCTGCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSAAVD
Trigger: GTCCACTGCAGCAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTGCCCTCAAGCTC +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSALKL
Trigger: GAGCTTGAGGGCAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS TCA 90 bp GCAGCTTCCGGAAGGTCTCCTCATACTGAGGCAGCTCCACATATGTaGTCAGCCACTGTACCACCTCATCCACGGTCCAATTGTATACTG +
Preference number: 5 (lower is better)
Translates to: AASGRSPHTEAAPHM*SATVPPHPRSNCIL
Trigger: CAGTATACAATTGGACCGTGGATGAGGTGGTACAGTGGCTGATCACATATGTGGAGCTGCCTCAGTATGAGGAGACCTTCCGGAAGCTGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533445.1
CDS-3UTR CAA 90 bp TGTCAGAAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGAAAATGACAGCATCCTaGCCCAACAACTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: CQKLLVLSSLQLLGEVGEKMTAS*PNNSRA
Trigger: AGCCCTGGAGTTGTTGGGCAAGGATGCTGTCATTTT...CTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTTCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp CATCATCGTCCATCAGTTTGTGGATGTTACGGACTGCCTCGAAGCTaGGTTTCTCATCCTCACTGTGACACAGGGGCTTGTCAATTCGGC +
Preference number: 5 (lower is better)
Translates to: HHRPSVCGCYGLPRS*VSHPHCDTGACQFG
Trigger: GCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS TCA 90 bp GCAGCTTCCGGAAGGTCTCCTCATACTGAGGCAGCTCCACATATGTaGTCAGCCACTGTACCACCTCATCCACGGTCCAATTGTATACTT +
Preference number: 5 (lower is better)
Translates to: AASGRSPHTEAAPHM*SATVPPHPRSNCIL
Trigger: AAGTATACAATTGGACCGTGGATGAGGTGGTACAGTGGCTGATCACATATGTGGAGCTGCCTCAGTATGAGGAGACCTTCCGGAAGCTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300737.8
ENST00000525403.5
ENST00000526596.2
ENST00000526771.5
ENST00000527651.5
ENST00000528656.5
ENST00000532610.5
ENST00000532919.5
ENST00000616714.4
CDS-3UTR CAA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTACATCCACATCACCATaGGCATCATCGTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPTSTSP*ASSSIS
Trigger: ACTGATGGACGATGATGCCAATGGTGATGTGGATGT...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTACATCCACATCACCATaGGCATCATCGTCCATCAGT +
Preference number: 5 (lower is better)
Translates to: SWELREQQLRHALKWRGSTSTSP*ASSSIS
Trigger: ACTGATGGACGATGATGCCAATGGTGATGTGGATGT...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCCAGCTGGGGTCTATGTaGAGGGCAGCCACCAGTGAG +
Preference number: 5 (lower is better)
Translates to: VERKSDCLITYSSGIHSCQLGSM*RAATSE
Trigger: CTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTG...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCATCAGGCTGTGGGCCTaGTCCAGCCCATGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: VERKSDCLITYSSGIHSCIRLWA*SSPWFS
Trigger: GCTGAACCATGGGCTGGACAAGGCCCACAGCCTGAT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GGGGAGTGGTGGGAGGGAGGAGCCCGAAAGCAAGAGACAGAAACAAGAAACCAAGGCTTCTTAAAGATTTaGAGGGGAAACTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: GEWWEGGARKQETETRNQGFLKI*RGNFFR
Trigger: CCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAGCC...TTGGTTTCTTGTTTCTGTCTCTTGCTTTCGGGCTCCTCCCTCCCACCACTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCTTAGCCACCGGCTTCTTAAAGATTTaGAGGGGAAACTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: WGKVVTQPPSPIPSSLATGFLKI*RGNFFR
Trigger: CCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAGCC...GGTGGCTAAGGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp TGGGAAGGGTGGGGGAAAGTGGTCACACAGCCGCCTTCACCTATACCATCTTCCAAAGTCTCTGGTGGGTaGTTCTCTGAGAATTGGTTT +
Preference number: 5 (lower is better)
Translates to: WEGWGKVVTQPPSPIPSSKVSGG*FSENWF
Trigger: AAACCAATTCTCAGAGAACAACCCACCAGAGACTTT...GGAAGATGGTATAGGTGAAGGCGGCTGTGTGACCACTTTCCCCCACCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTATTCCCAGCAAGTC +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNYSQQV
Trigger: GACTTGCTGGGAATAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524822.5
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTCAACTCCTCTCT +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSQLLS
Trigger: AGAGAGGAGTTGAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525055.5
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTTGCCTACAGGTT +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSCLQV
Trigger: AACCTGTAGGCAAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532919.5
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTGGTTACCAACCA +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSGYQP
Trigger: TGGTTGGTAACCAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532990.1
CDS GCA 90 bp ATCACCATTGGCATCATCGTCCATCAGTTTGTGGATGTTACGGACTaGCTCGAAGCTGAGTTTCTCATCCTCACTGTGACACAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: ITIGIIVHQFVDVTD*LEAEFLILTVTQGL
Trigger: AAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATGCCAATGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS-3UTR CAA 90 bp CTAAGACATGCACTGAAGTGGAGAGGGAGTGACAGCAGCAGCCCATGGTTGGGATCATCCACGGTCCAATaGTATACTTCTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: LRHALKWRGSDSSSPWLGSSTVQ*YTSDDF
Trigger: GAAGTCATCAGAAGTATACAATTGGACCGTGGATGA...TCCCAACCATGGGCTGCTGCTGTCACTCCCTCTCCACTTCAGTGCATGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp AGCTGGGAGCTGAGGGAACAGCAACTAAGACATGCACTGAAGTGGAGAGGGAGTGGCTTCTTAAAGATTTaGAGGGGAAACTTCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SWELREQQLRHALKWRGSGFLKI*RGNFFR
Trigger: CCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAGCC...ACTCCCTCTCCACTTCAGTGCATGTCTTAGTTGCTGTTCCCTCAGCTCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS-3UTR CAA 90 bp AAGCTACTCGTCCTATCTTCCCTGCAACTGCTAGGGGAAGTTGGGGAGTGGTGGAAAGTCTCTGGTGGGTaGTTCTCTGAGAATTGGTTT +
Preference number: 5 (lower is better)
Translates to: KLLVLSSLQLLGEVGEWWKVSGG*FSENWF
Trigger: AAACCAATTCTCAGAGAACAACCCACCAGAGACTTT...CCACCACTCCCCAACTTCCCCTAGCAGTTGCAGGGAAGATAGGACGAGTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATCCTTGCCCAACAACTCCAGGGCTCCATAAGAGCCCTGTATCATGGCTGTGGCATGCAGCGTAGGCACTaGGGAAATTCAGATTACTTT +
Preference number: 5 (lower is better)
Translates to: ILAQQLQGSIRALYHGCGMQRRH*GNSDYF
Trigger: AAAGTAATCTGAATTTCCCAAGTGCCTACGCTGCAT...GCCACAGCCATGATACAGGGCTCTTATGGAGCCCTGGAGTTGTTGGGCAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 90 bp TCTTCCACATCCACATCACCATTGGCATCATCGTCCATCAGTTTGTaGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SSTSTSPLASSSISL*MLRTASKLSFSSSL
Trigger: CAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATGCCAATGGTGATGTGGATGTGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS CCA 90 bp CAGCCTGATTCCTGTCCTTCTATGCCTCTCTCATCAGCTAAAAGTTaGGACTGCCAAAGCAAGATAAGAACAATCAGGCCAGAGGTCCCT +
Preference number: 5 (lower is better)
Translates to: QPDSCPSMPLSSAKS*DCQSKIRTIRPEVP
Trigger: AGGGACCTCTGGCCTGATTGTTCTTATCTTGCTTTGGCAGTCCCAACTTTTAGCTGATGAGAGAGGCATAGAAGGACAGGAATCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534707.1
CDS-3UTR CAA 90 bp GCATCCACTCATGCTCCAATGAACAGATGCCTCTCCCAACCCATTCCCAAGCCTTCATCCACGGTCCAATaGTATACTTCTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: ASTHAPMNRCLSQPIPKPSSTVQ*YTSDDF
Trigger: GAAGTCATCAGAAGTATACAATTGGACCGTGGATGA...AGGCTTGGGAATGGGTTGGGAGAGGCATCTGTTCATTGGAGCATGAGTGGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGCCTGTCATGGTGGTGTaGGTGACAGCCAGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKPVMVV*VTASLG
Trigger: GCCAAGGCTGGCTGTCACCAACACCACCATGACAGG...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS TCA 90 bp CCTCACCATGGAAGGTGCTGTGTTTCACTGTTGGGTCATGGTAATTaGGGTCTTCCCTCAGGAACTCAAATGGAAATGCAGAAATCACCC +
Preference number: 5 (lower is better)
Translates to: PHHGRCCVSLLGHGN*GLPSGTQMEMQKSP
Trigger: GGGTGATTTCTGCATTTCCATTTGAGTTCCTGAGGGAAGACCTCAATTACCATGACCCAACAGTGAAACACAGCACCTTCCATGGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527484.5
CDS TCA 90 bp TTGCCTGAAGACAGAGGAAAGAGAACTGCAGGCATGGACTTGGTGTaGGCCCCAATAGGAATGAAGCCTCTTCTCAGAGGAACAAGTTTT +
Preference number: 5 (lower is better)
Translates to: LPEDRGKRTAGMDLV*APIGMKPLLRGTSF
Trigger: AAAACTTGTTCCTCTGAGAAGAGGCTTCATTCCTATTGGGGCTCACACCAAGTCCATGCCTGCAGTTCTCTTTCCTCTGTCTTCAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS GCA 90 bp CACAAATTCGACCACCCAGCAACAAATACACACACAGACACACACTaGTTTCTAACCTGTGTGTGTGTGTTACACCTGAAGGCCACCCAT +
Preference number: 5 (lower is better)
Translates to: HKFDHPATNTHTDTH*FLTCVCVLHLKATH
Trigger: ATGGGTGGCCTTCAGGTGTAACACACACACACAGGTTAGAAAGCAGTGTGTGTCTGTGTGTGTATTTGTTGCTGGGTGGTCGAATTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530554.5
CDS CCA 90 bp GCTGATGAGCTTATCCTCACCATGGAAGGTGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTCTTCCCTCAGGAACTCATCACTTTC +
Preference number: 5 (lower is better)
Translates to: ADELILTMEGAVFHC*VMVIEVFPQELITF
Trigger: GAAAGTGATGAGTTCCTGAGGGAAGACCTCAATTACCATGACCCAACAGTGAAACACAGCACCTTCCATGGTGAGGATAAGCTCATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGATGCTTGGGGAGCTTaGGGGCAGCACCTCTTAGAG +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKDAWGA*GQHLLE
Trigger: CTCTAAGAGGTGCTGCCCCAAAGCTCCCCAAGCATC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGCAGAGATACCCGGCTaGTCAAGAAGTGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKAEIPG*SRSGQP
Trigger: AGGCTGGCCACTTCTTGACAAGCCGGGTATCTCTGC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCATGTGAATTCTAT +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSCEFY
Trigger: ATAGAATTCACATGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532610.5
CDS TCA 90 bp TGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCATCGAAGTTATTT +
Preference number: 5 (lower is better)
Translates to: WMLRTASKLSFSSSL*HRGLSIRQNSSKLF
Trigger: AAATAACTTCGATGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530554.5
CDS CCA 90 bp GCTGATGAGCTTATCCTCACCATGGAAGGTGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTCTTCCCTCAGGAACTCAAATGGAAA +
Preference number: 5 (lower is better)
Translates to: ADELILTMEGAVFHC*VMVIEVFPQELKWK
Trigger: TTTCCATTTGAGTTCCTGAGGGAAGACCTCAATTACCATGACCCAACAGTGAAACACAGCACCTTCCATGGTGAGGATAAGCTCATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527484.5
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGGAGTGGATGCCAGGGTaGTTGACAATCTGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKEWMPG*LTIWKP
Trigger: TGGCTTCCAGATTGTCAACAACCCTGGCATCCACTC...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTCATCGTCCATCAGTTaGTGGATGTTACGGACTGCC +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKSSSIS*WMLRTA
Trigger: GGCAGTCCGTAACATCCACAAACTGATGGACGATGA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp GTAGAGAGAAAAAGTGACTGCCTTATAACCTACAGTTCTGGCATCCACTCATGCATGCAGCGTAGGCACTaGGGAAATTCAGATTACTTT +
Preference number: 5 (lower is better)
Translates to: VERKSDCLITYSSGIHSCMQRRH*GNSDYF
Trigger: AAAGTAATCTGAATTTCCCAAGTGCCTACGCTGCAT...GCATGAGTGGATGCCAGAACTGTAGGTTATAAGGCAGTCACTTTTTCTCTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGTCATCCACGGTCCAATaGTATACTTCTGATGACTTC +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKSSTVQ*YTSDDF
Trigger: GAAGTCATCAGAAGTATACAATTGGACCGTGGATGA...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS-3UTR CAA 90 bp ATTAGGATGAGGCTCCTTCTGACCCACATCAATACCAAAGAACAAACTTCAAAGAAAGTCTCTGGTGGGTaGTTCTCTGAGAATTGGTTT +
Preference number: 5 (lower is better)
Translates to: IRMRLLLTHINTKEQTSKKVSGG*FSENWF
Trigger: AAACCAATTCTCAGAGAACAACCCACCAGAGACTTT...CTTTGAAGTTTGTTCTTTGGTATTGATGTGGGTCAGAAGGAGCCTCATCCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp GGTCAGCGCCCCCGCCCAGTCCCGTGCCCAGGCGGCTaGCGGTGCCCAGGTCCAGCAGGCGGACGCACACCG +
Preference number: 6 (lower is better)
Translates to: GQRPRPVPCPGG*RCPGPAGGRTP
Trigger: CGGTGTGCGTCCGCCTGCTGGACCTGGGCACCGCCAGCCGCCTGGGCACGGGACTGGGCGGGGGCGCTGACC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS GCA 72 bp CTCCTAGGCCGAGGTCAGCGCCCCCGCCCAGTCCCGTaGCCAGGCGGCTGGCGGTGCCCAGGTCCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: LLGRGQRPRPVP*PGGWRCPGPAG
Trigger: GCCTGCTGGACCTGGGCACCGCCAGCCGCCTGGGCACGGGACTGGGCGGGGGCGCTGACCTCGGCCTAGGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS TCA 72 bp GCAGAAGCTGGGGAGGGCGTGCGACCCGCAGGGTCCTaGGGGCGCGGGCGTCTCCGGGATCCTGGGCCTCCT +
Preference number: 6 (lower is better)
Translates to: AEAGEGVRPAGS*GRGRLRDPGPP
Trigger: AGGAGGCCCAGGATCCCGGAGACGCCCGCGCCCTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTTCTGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp GGTGCGGGAGGAGGGCTGGCTCCTCAGGTCCAACAGTaGGTCCGCCGGGGCTGCGGCGGCCTGAGCTCGTGC +
Preference number: 6 (lower is better)
Translates to: GAGGGLAPQVQQ*VRRGCGGLSSC
Trigger: GCACGAGCTCAGGCCGCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp ACCTCGCCCTGCCGAAGAGCGGCGAGCAGCAGAAGCTaGGGAGGGCGTGCGACCCGCAGGGTCCTGAGGGCG +
Preference number: 6 (lower is better)
Translates to: TSPCRRAASSRS*GGRATRRVLRA
Trigger: CGCCCTCAGGACCCTGCGGGTCGCACGCCCTCCCCAGCTTCTGCTGCTCGCCGCTCTTCGGCAGGGCGAGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 72 bp CTGGCTCCTCAGGTCCAACAGTGGGTCCGCCGGGGCTaGGGCGGCCTGAGCTCGTGCCGCTTCCGGAGACTT +
Preference number: 6 (lower is better)
Translates to: LAPQVQQWVRRG*GGLSSCRFRRL
Trigger: AAGTCTCCGGAAGCGGCACGAGCTCAGGCCGCCGCAGCCCCGGCGGACCCACTGTTGGACCTGAGGAGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 72 bp CTCGGGATCCCAGAGGCAAAGCCAGGAGCCCGGGAGTaGAGCCGACGGTCTCCAGGCAAGATGCCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: LGIPEAKPGARE*SRRSPGKMPSR
Trigger: CCGCGAGGGCATCTTGCCTGGAGACCGTCGGCTGCACTCCCGGGCTCCTGGCTTTGCCTCTGGGATCCCGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 72 bp CGCTTCCGGAGACTTCGGGCAGGGTGGCTGCGGGGCTaGTGTCAGCTCCGCAGATTACTACACCCCTGCGGA +
Preference number: 6 (lower is better)
Translates to: RFRRLRAGWLRG*CQLRRLLHPCG
Trigger: TCCGCAGGGGTGTAGTAATCTGCGGAGCTGACAGCAGCCCCGCAGCCACCCTGCCCGAAGTCTCCGGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 72 bp CCGCGAGCCTGCCCCCTCCAACAGCCAAAGGTCAAGTaGTCCAAGTTTGGGTGCGGGAGGAGGGCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: PRACPLQQPKVK*SKFGCGRRAGS
Trigger: GGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGTTGGAGGGGGCAGGCTCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp GGTCAAGTGCTCCAAGTTTGGGTGCGGGAGGAGGGCTaGCTCCTCAGGTCCAACAGTGGGTCCGCCGGGGCT +
Preference number: 6 (lower is better)
Translates to: GQVLQVWVREEG*LLRSNSGSAGA
Trigger: AGCCCCGGCGGACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp CTGAGCTCGTGCCGCTTCCGGAGACTTCGGGCAGGGTaGCTGCGGGGCTGCTGTCAGCTCCGCAGATTACTA +
Preference number: 6 (lower is better)
Translates to: LSSCRFRRLRAG*LRGCCQLRRLL
Trigger: TAGTAATCTGCGGAGCTGACAGCAGCCCCGCAGCCACCCTGCCCGAAGTCTCCGGAAGCGGCACGAGCTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp GAGCCTCGTCTGCAGCACGGCTCATCTGAGGAGGTTTaGGGGCCACACGCTGGCGGTCACTCATGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: EPRLQHGSSEEV*GPHAGGHSCGG
Trigger: CCCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526156.1
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp CGCGAGCCTGCCCCCTCCAACAGCCAAAGGTCAAGTGCTCCAAGTTaGGGTGCGGGAGGAGGGCTGGCTCCTCAGGTCCAACAGTGGGTC +
Preference number: 6 (lower is better)
Translates to: REPAPSNSQRSSAPS*GAGGGLAPQVQQWV
Trigger: GACCCACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGTTGGAGGGGGCAGGCTCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp GGAAGGGGGCGGCCGGAGTCTCCGCGGGCACAGAAGTaGAGGAGGAAGAGAAGAGAAGAGAAGAGAGGCGAG +
Preference number: 6 (lower is better)
Translates to: GRGRPESPRAQK*RRKRREEKRGE
Trigger: CTCGCCTCTCTTCTCTTCTCTTCTCTTCCTCCTCCACTTCTGTGCCCGCGGAGACTCCGGCCGCCCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS CCA 72 bp GCCCTCTACCAACCTCTGAGATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCGAACACTGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: ALYQPLRSQAML*LRQALPNTALQ
Trigger: CTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGATCTCAGAGGTTGGTAGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS TCA 72 bp ATGGCATTGAGAGCCTCGTCTGCAGCACGGCTCATCTaGGGAGGTTTGGGGGCCACACGCTGGCGGTCACTC +
Preference number: 6 (lower is better)
Translates to: MALRASSAARLI*GGLGATRWRSL
Trigger: GAGTGACCGCCAGCGTGTGGCCCCCAAACCTCCTCAGATGAGCCGTGCTGCAGACGAGGCTCTCAATGCCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526156.1
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533977.5
ENST00000616714.4
CDS GCA 72 bp TGCTGTGGCTCCGTCAGGCGCTGCCGAACACTGCTCTaGAGGCTAGGGGACTGCATGGACAAGGGAGACACA +
Preference number: 6 (lower is better)
Translates to: CCGSVRRCRTLL*RLGDCMDKGDT
Trigger: TGTGTCTCCCTTGTCCATGCAGTCCCCTAGCCTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000527651.5
ENST00000531332.1
ENST00000533977.5
ENST00000616714.4
CDS GCA 72 bp CTCGATCTGTTGCCAGCGGTGCAGGCGCTCCCGCAATaGTGCTGTCACCTCGCTCAGTGCTTGCCTGAAGAC +
Preference number: 6 (lower is better)
Translates to: LDLLPAVQALPQ*CCHLAQCLPED
Trigger: GTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS GCA 72 bp CCCCCAAGCTCTCTGAATGCCCAGGCATCACAGCGGTaGTGTCAGAAGGGGGTGTGTCAGGGTAGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: PPSSLNAQASQR*CQKGVCQGRAP
Trigger: TGGAGCCCTACCCTGACACACCCCCTTCTGACAGCACCGCTGTGATGCCTGGGCATTCAGAGAGCTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS TCA 72 bp AGCTGGTTCCTGTCGCCTTCTCACTGTGACTATGGCTaGGGCTCTGGCCCTGGTGCAGGAGGAGTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: SWFLSPSHCDYG*GSGPGAGGVPR
Trigger: TCTGGGGACTCCTCCTGCACCAGGGCCAGAGCCTCAGCCATAGTCACAGTGAGAAGGCGACAGGAACCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS TCA 72 bp CTCTGCAGGCTAGGGGCGGGGTATTTCCAGAGGGACTaGTCATCCGAGCCGGCGGATGTAGAGCAGAGAGAG +
Preference number: 6 (lower is better)
Translates to: LCRLGAGYFQRD*SSEPADVEQRE
Trigger: CTCTCTCTGCTCTACATCCGCCGGCTCGGATGATCAGTCCCTCTGGAAATACCCCGCCCCTAGCCTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526596.2
CDS GCA 72 bp GATCTGTTGCCAGCGGTGCAGGCGCTCCCGCAATGCTaGTGTCACCTCGCTCAGTGCTTGCCTGAAGACAGA +
Preference number: 6 (lower is better)
Translates to: DLLPAVQALPQC*CHLAQCLPEDR
Trigger: TCTGTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS CCA 72 bp ATGGGTCAAATCCCTCTGAGATCCCAGGCCATGCTGTaGCTCCGTCAGGCGCTGCCGAACACTGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: MGQIPLRSQAML*LRQALPNTALQ
Trigger: CTGCAGAGCAGTGTTCGGCAGCGCCTGACGGAGCCACAGCATGGCCTGGGATCTCAGAGGGATTTGACCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526156.1
ENST00000526596.2
ENST00000531332.1
ENST00000533977.5
CDS CCA 72 bp GGAGGTTTGGGGGCCACACGCTGGCGGTCACTCATGTaGAGGGAGGACTCCGAATCGGAATGGGTCAAATCC +
Preference number: 6 (lower is better)
Translates to: GGLGATRWRSLM*REDSESEWVKS
Trigger: GGATTTGACCCATTCCGATTCGGAGTCCTCCCTCCACATGAGTGACCGCCAGCGTGTGGCCCCCAAACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526156.1
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp GCCAGGGTTGTTGACAATCTGGAAGCCACAGAGGATCTCGATCTGTaGCCAGCGGTGCAGGCGCTCCCGCAATGCTGCTGTCACCTCGCT +
Preference number: 6 (lower is better)
Translates to: ARVVDNLEATEDLDL*PAVQALPQCCCHLA
Trigger: AGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp GCGGTGCAGGCGCTCCCGCAATGCTGCTGTCACCTCGCTCAGTGCTaGCCTGAAGACAGAGGAAAGAGAACTGCAGGCATGGACTTGGTG +
Preference number: 6 (lower is better)
Translates to: AVQALPQCCCHLAQC*PEDRGKRTAGMDLV
Trigger: CACCAAGTCCATGCCTGCAGTTCTCTTTCCTCTGTCTTCAGGCAAGCACTGAGCGAGGTGACAGCAGCATTGCGGGAGCGCCTGCACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS GCA 72 bp CTCCAACAGCCAAAGGTCAAGTGCTCCAAGTTTGGGTaGGGGAGGAGGGCTGGCTCCTCAGGTCCAACAGTG +
Preference number: 6 (lower is better)
Translates to: LQQPKVKCSKFG*GRRAGSSGPTV
Trigger: CACTGTTGGACCTGAGGAGCCAGCCCTCCTCCCGCACCCAAACTTGGAGCACTTGACCTTTGGCTGTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000616714.4
CDS GCA 72 bp ACAATCAGGCCAGAGGTCCCTCCCCAAAGGCTGGGCTaGCTCGGACTCCCATCCCAAGCTACTGACCTTACT +
Preference number: 6 (lower is better)
Translates to: TIRPEVPPQRLG*LGLPSQATDLT
Trigger: AGTAAGGTCAGTAGCTTGGGATGGGAGTCCGAGGCAGCCCAGCCTTTGGGGAGGGACCTCTGGCCTGATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534707.1
CDS CCA 72 bp CTTGCTGGAGACCACCCTGGGCCTCTAATGCCAATCTaGAGAATGGGGCACCTCCTCCCAGAAACCTCCCAC +
Preference number: 6 (lower is better)
Translates to: LAGDHPGPLMPI*RMGHLLPETSH
Trigger: GTGGGAGGTTTCTGGGAGGAGGTGCCCCATTCTCCAGATTGGCATTAGAGGCCCAGGGTGGTCTCCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526156.1
CDS CAA 72 bp ATGAAAGGCTGCGCATTCGCCGCAGAGATACCCGGCTaGTCAAGAAGTGGCCAGCCTCGCCCTCTACCAACC +
Preference number: 6 (lower is better)
Translates to: MKGCAFAAEIPG*SRSGQPRPLPT
Trigger: GGTTGGTAGAGGGCGAGGCTGGCCACTTCTTGACAAGCCGGGTATCTCTGCGGCGAATGCGCAGCCTTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS CAA 90 bp CCCTCCCGCAGCTCCTTCAGCCGCTGGGCTTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTCTTTTCCAGATGGACCTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: PSRSSFSRWASCLAR*ISSRSFFSRWTFST
Trigger: GGTGGAGAAGGTCCATCTGGAAAAGAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCTGCGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp CCTCAAGGCCTCCCGAACCTGCTCCAACTCCTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTCAGTACCCTCCCGCAGCTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: PQGLPNLLQLLLSIF*AAPLILSTLPQLLQ
Trigger: CTGAAGGAGCTGCGGGAGGGTACTGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAGGAGTTGGAGCAGGTTCGGGAGGCCTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp ACTGTCCAGATGAAAGGCTGCGCATTCGCCGCAGAGATACCCGGCTaGTCAAGAAGTGGCCAGCCTCGCCCTCTACCAACCTCTGAGATC +
Preference number: 6 (lower is better)
Translates to: TVQMKGCAFAAEIPG*SRSGQPRPLPTSEI
Trigger: GATCTCAGAGGTTGGTAGAGGGCGAGGCTGGCCACTTCTTGACAAGCCGGGTATCTCTGCGGCGAATGCGCAGCCTTTCATCTGGACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616714.4
CDS GCA 72 bp TTGACAATCTGGAAGCCACAGAGGATCTCGATCTGTTaGCAGCGGTGCAGGCGCTCCCGCAATGCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: LTIWKPQRISIC*QRCRRSRNAAV
Trigger: GACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTCTGTGGCTTCCAGATTGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS GCA 72 bp CTCTGGTGGAGGAGGTGTCAGCGACTTGAGAATGAGTaGGCCAAAGAAGACAGAGCCACGCCTGAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LWWRRCQRLENE*AKEDRATPEPP
Trigger: AGGAGGCTCAGGCGTGGCTCTGTCTTCTTTGGCGCACTCATTCTCAAGTCGCTGACACCTCCTCCACCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS CCA 72 bp TTCGGCAAAACTCTGCTGCAGTGGACTCCTCAGAGTTaGCCCCCGAGCTGGTTCCTGTCGCCTTCTCACTGT +
Preference number: 6 (lower is better)
Translates to: FGKTLLQWTPQS*PPSWFLSPSHC
Trigger: ACAGTGAGAAGGCGACAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS CCA 72 bp TCCCGAACCTGCTCCAACTCCTCCTCAGCATATTTTTaGCGGCTCCGCTCATTCTCAGTACCCTCCCGCAGC +
Preference number: 6 (lower is better)
Translates to: SRTCSNSSSAYF*RLRSFSVPSRS
Trigger: GCTGCGGGAGGGTACTGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAGGAGTTGGAGCAGGTTCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS CCA 72 bp CCTCCCTGCATCTCATTCTCCCAGCTACCTCTCTGGTaGAGGAGGTGTCAGCGACTTGAGAATGAGTGCGCC +
Preference number: 6 (lower is better)
Translates to: PPCISFSQLPLW*RRCQRLENECA
Trigger: GGCGCACTCATTCTCAAGTCGCTGACACCTCCTCCACCAGAGAGGTAGCTGGGAGAATGAGATGCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS CAA 72 bp ATTCGGCAAAACTCTGCTGCAGTGGACTCCTCAGAGTaGGCCCCCGAGCTGGTTCCTGTCGCCTTCTCACTG +
Preference number: 6 (lower is better)
Translates to: IRQNSAAVDSSE*APELVPVAFSL
Trigger: CAGTGAGAAGGCGACAGGAACCAGCTCGGGGGCCAACTCTGAGGAGTCCACTGCAGCAGAGTTTTGCCGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS CAA 72 bp CTCCCGAACCTGCTCCAACTCCTCCTCAGCATATTTTaGGCGGCTCCGCTCATTCTCAGTACCCTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: LPNLLQLLLSIF*AAPLILSTLPQ
Trigger: CTGCGGGAGGGTACTGAGAATGAGCGGAGCCGCCAAAAATATGCTGAGGAGGAGTTGGAGCAGGTTCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS CAA 72 bp GTTGACAATCTGGAAGCCACAGAGGATCTCGATCTGTaGCCAGCGGTGCAGGCGCTCCCGCAATGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: VDNLEATEDLDL*PAVQALPQCCC
Trigger: ACAGCAGCATTGCGGGAGCGCCTGCACCGCTGGCAACAGATCGAGATCCTCTGTGGCTTCCAGATTGTCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS CAA 72 bp CCCAGCTACCTCTCTGGTGGAGGAGGTGTCAGCGACTaGAGAATGAGTGCGCCAAAGAAGACAGAGCCACGC +
Preference number: 6 (lower is better)
Translates to: PSYLSGGGGVSD*RMSAPKKTEPR
Trigger: GCGTGGCTCTGTCTTCTTTGGCGCACTCATTCTCAAGTCGCTGACACCTCCTCCACCAGAGAGGTAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS CAA 90 bp TCTCATTCTCCCAGCTACCTCTCTGGTGGAGGAGGTGTCAGCGACTaGAGAATGAGTGCGCCAAAGAAGACAGAGCCACGCCTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: SHSPSYLSGGGGVSD*RMSAPKKTEPRLSL
Trigger: GAGGCTCAGGCGTGGCTCTGTCTTCTTTGGCGCACTCATTCTCAAGTCGCTGACACCTCCTCCACCAGAGAGGTAGCTGGGAGAATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS TCA 72 bp CATCCAGCTGGGGTCTATGTTGAGGGCAGCCACCAGTaGGTGGATGCCAGGGTTGTTGACAATCTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: HPAGVYVEGSHQ*VDARVVDNLEA
Trigger: GGCTTCCAGATTGTCAACAACCCTGGCATCCACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS CCA 72 bp CAGCTGGGGTCTATGTTGAGGGCAGCCACCAGTGAGTaGATGCCAGGGTTGTTGACAATCTGGAAGCCACAG +
Preference number: 6 (lower is better)
Translates to: QLGSMLRAATSE*MPGLLTIWKPQ
Trigger: CTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCACTCACTGGTGGCTGCCCTCAACATAGACCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp CTGGGGTCTATGTTGAGGGCAGCCACCAGTGAGTGGATGCCAGGGTaGTTGACAATCTGGAAGCCACAGAGGATCTCGATCTGTTGCCAG +
Preference number: 6 (lower is better)
Translates to: LGSMLRAATSEWMPG*LTIWKPQRISICCQ
Trigger: CTGGCAACAGATCGAGATCCTCTGTGGCTTCCAGATTGTCAACAACCCTGGCATCCACTCACTGGTGGCTGCCCTCAACATAGACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000531332.1
ENST00000533343.1
ENST00000533977.5
ENST00000616714.4
CDS TCA 72 bp CCACTGAGCTGCAGCTTCCGGAAGGTCTCCTCATACTaGGGCAGCTCCACATATGTGATCAGCCACTGTACC +
Preference number: 6 (lower is better)
Translates to: PLSCSFRKVSSY*GSSTYVISHCT
Trigger: GGTACAGTGGCTGATCACATATGTGGAGCTGCCTCAGTATGAGGAGACCTTCCGGAAGCTGCAGCTCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000300737.8
ENST00000525403.5
ENST00000526596.2
ENST00000526771.5
ENST00000527484.5
ENST00000527651.5
ENST00000528656.5
ENST00000532610.5
ENST00000532919.5
ENST00000533445.1
ENST00000616714.4
CDS TCA 72 bp ACTGTATCCAGAGCCTTCAGCTGCAGCTTCTGCCGATaGCTCCGGTCTGTCATCTTCAGCACAGTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: TVSRAFSCSFCR*LRSVIFSTVPV
Trigger: GACAGGGACTGTGCTGAAGATGACAGACCGGAGTCATCGGCAGAAGCTGCAGCTGAAGGCTCTGGATACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000526771.5
ENST00000527484.5
ENST00000527651.5
ENST00000532610.5
ENST00000532919.5
ENST00000533445.1
ENST00000533977.5
ENST00000616714.4
CDS CAA 72 bp AGCTCCTTCAGCCGCTGGGCTTCCTGCTTAGCAAGGTaGATCTCATCGCGCAGCTTCTTTTCCAGATGGACC +
Preference number: 6 (lower is better)
Translates to: SSFSRWASCLAR*ISSRSFFSRWT
Trigger: GGTCCATCTGGAAAAGAAGCTGCGCGATGAGATCAACCTTGCTAAGCAGGAAGCCCAGCGGCTGAAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533977.5
ENST00000616714.4
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTGCC +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSA
Trigger: GGCAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525403.5
CDS TCA 72 bp ACCAGCTTCTCACCTCAACTCCTCTCTGCTGCCAACTaGGCCTGGGAGAGCTGTTTGGCTTCCTTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: TSFSPQLLSAAN*AWESCLASFLP
Trigger: AGGAAGAAAGGAAGCCAAACAGCTCTCCCAGGCTCAGTTGGCAGCAGAGAGGAGTTGAGGTGAGAAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532990.1
CDS GCA 72 bp GGAACTCAAATGGAAATGCAGAAATCACCCGTCTACTaGGTCGCTCACGCTGGGAGCTGTAGACCAGAGCTC +
Preference number: 6 (lower is better)
Translates to: GTQMEMQKSPVY*VAHAGSCRPEL
Trigger: GAGCTCTGGTCTACAGCTCCCAGCGTGAGCGACGCAGTAGACGGGTGATTTCTGCATTTCCATTTGAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527484.5
CDS TCA 72 bp TACATCCATGACTCTAGGTCTCAGTCAACATGCGTCTaGTGTGGACACCTCGGGATCCCAGAGGCAAAGCCA +
Preference number: 6 (lower is better)
Translates to: YIHDSRSQSTCV*CGHLGIPEAKP
Trigger: TGGCTTTGCCTCTGGGATCCCGAGGTGTCCACATCAGACGCATGTTGACTGAGACCTAGAGTCATGGATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTGCT +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSA
Trigger: AGCAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000616714.4
CDS TCA 72 bp GGAAGGTCTCCTCATACTGAGGCAGCTCCACATATGTaGTCAGCCACTGTACCACCTCATCCACGGTCCAAT +
Preference number: 6 (lower is better)
Translates to: GRSPHTEAAPHM*SATVPPHPRSN
Trigger: ATTGGACCGTGGATGAGGTGGTACAGTGGCTGATCACATATGTGGAGCTGCCTCAGTATGAGGAGACCTTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000300737.8
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000526771.5
ENST00000527484.5
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000533445.1
ENST00000616714.4
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTGGT +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSG
Trigger: ACCAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528656.5
ENST00000532990.1
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTTGC +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSC
Trigger: GCAAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532919.5
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCATCG +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSS
Trigger: CGATGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530554.5
CDS TCA 72 bp CCATCAGTTTGTGGATGTTACGGACTGCCTCGAAGCTaGGTTTCTCATCCTCACTGTGACACAGGGGCTTGT +
Preference number: 6 (lower is better)
Translates to: PSVCGCYGLPRS*VSHPHCDTGAC
Trigger: ACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTATTCC +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNYS
Trigger: GGAATAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524822.5
CDS TCA 72 bp ATTCGGCAAAACTCTCAACTCCTCTCTGCTGCCAACTaGGCCTGGGAGAGCTGTTTGGCTTCCTTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: IRQNSQLLSAAN*AWESCLASFLP
Trigger: AGGAAGAAAGGAAGCCAAACAGCTCTCCCAGGCTCAGTTGGCAGCAGAGAGGAGTTGAGAGTTTTGCCGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525055.5
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCTCAA +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSQ
Trigger: TTGAGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525055.5
CDS TCA 72 bp GACAGAGGAAAGAGAACTGCAGGCATGGACTTGGTGTaGGCCCCAATAGGAATGAAGCCTCTTCTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: DRGKRTAGMDLV*APIGMKPLLRG
Trigger: TCCTCTGAGAAGAGGCTTCATTCCTATTGGGGCTCACACCAAGTCCATGCCTGCAGTTCTCTTTCCTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531332.1
CDS TCA 72 bp CGGACTGCCTCGAAGCTGAGTTTCTCATCCTCACTGTaGCACAGGGGCTTGTCAATTCGGCAAAACTCATGT +
Preference number: 6 (lower is better)
Translates to: RTASKLSFSSSL*HRGLSIRQNSC
Trigger: ACATGAGTTTTGCCGAATTGACAAGCCCCTGTGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532610.5
CDS GCA 72 bp CTTGTCAATTCGGCAAAACTCTCAACTCCTCTCTGCTaGCAACTGAGCCTGGGAGAGCTGTTTGGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: LVNSAKLSTPLC*QLSLGELFGFL
Trigger: AAGGAAGCCAAACAGCTCTCCCAGGCTCAGTTGGCAGCAGAGAGGAGTTGAGAGTTTTGCCGAATTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525055.5
CDS TCA 72 bp ATAACGATAGACACCACCAGCATGAAGTCCTTGAGGTaGTTATGGCGAGTCAAGAGAGGAGGCCCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: ITIDTTSMKSLR*LWRVKRGGPKS
Trigger: GCTCTTTGGGCCTCCTCTCTTGACTCGCCATAATCACCTCAAGGACTTCATGCTGGTGGTGTCTATCGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300737.8
ENST00000526596.2
ENST00000527651.5
ENST00000533445.1
ENST00000533977.5
ENST00000616714.4
CDS GCA 72 bp GGCATCATCGTCCATCAGTTTGTGGATGTTACGGACTaGCTCGAAGCTGAGTTTCTCATCCTCACTGTGACA +
Preference number: 6 (lower is better)
Translates to: GIIVHQFVDVTD*LEAEFLILTVT
Trigger: TGTCACAGTGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS CCA 72 bp TCCACATCACCATTGGCATCATCGTCCATCAGTTTGTaGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: STSPLASSSISL*MLRTASKLSFS
Trigger: TGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATGCCAATGGTGATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS CCA 72 bp CTTATCCTCACCATGGAAGGTGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTCTTCCCTCAGGAACTC +
Preference number: 6 (lower is better)
Translates to: LILTMEGAVFHC*VMVIEVFPQEL
Trigger: GAGTTCCTGAGGGAAGACCTCAATTACCATGACCCAACAGTGAAACACAGCACCTTCCATGGTGAGGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527484.5
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS CCA 72 bp CTTATCCTCACCATGGAAGGTGCTGTGTTTCACTGTTaGGTCATGGTAATTGAGGTCTTCCCTCAGGAACTG +
Preference number: 6 (lower is better)
Translates to: LILTMEGAVFHC*VMVIEVFPQEL
Trigger: CAGTTCCTGAGGGAAGACCTCAATTACCATGACCCAACAGTGAAACACAGCACCTTCCATGGTGAGGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526771.5
CDS CCA 72 bp GTCATGGTAATTGAGGTCTTCCCTCAGGAACTCAAATaGAAATGCAGAAATCACCCGTCTACTGCGTCGCTC +
Preference number: 6 (lower is better)
Translates to: VMVIEVFPQELK*KCRNHPSTASL
Trigger: GAGCGACGCAGTAGACGGGTGATTTCTGCATTTCCATTTGAGTTCCTGAGGGAAGACCTCAATTACCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527484.5
CDS CAA 72 bp ACATCCACATCACCATTGGCATCATCGTCCATCAGTTaGTGGATGTTACGGACTGCCTCGAAGCTGAGTTTC +
Preference number: 6 (lower is better)
Translates to: TSTSPLASSSIS*WMLRTASKLSF
Trigger: GAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATGCCAATGGTGATGTGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS CAA 72 bp CATCCTGCCTACTTCTTAAGAGGCTTCTTAAAGATTTaGAGGGGAAACTTCTTCCGGCCTGGGCTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: HPAYFLRGFLKI*RGNFFRPGLES
Trigger: AGACTCCAGCCCAGGCCGGAAGAAGTTTCCCCTCAAAATCTTTAAGAAGCCTCTTAAGAAGTAGGCAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300737.8
ENST00000526156.1
ENST00000526596.2
ENST00000533977.5
ENST00000616714.4
CDS CAA 90 bp CTTTCTTCCACATCCACATCACCATTGGCATCATCGTCCATCAGTTaGTGGATGTTACGGACTGCCTCGAAGCTGAGTTTCTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: LSSTSTSPLASSSIS*WMLRTASKLSFSSS
Trigger: TGAGGATGAGAAACTCAGCTTCGAGGCAGTCCGTAACATCCACAAACTGATGGACGATGATGCCAATGGTGATGTGGATGTGGAAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000300737.8
ENST00000524822.5
ENST00000525055.5
ENST00000525403.5
ENST00000526596.2
ENST00000527651.5
ENST00000528656.5
ENST00000530554.5
ENST00000532610.5
ENST00000532919.5
ENST00000532990.1
ENST00000616714.4
CDS TCA 72 bp GGAAGGTGCTGTGTTTCACTGTTGGGTCATGGTAATTaGGGTCTTCCCTCAGGAACTCAAATGGAAATGCAG +
Preference number: 6 (lower is better)
Translates to: GRCCVSLLGHGN*GLPSGTQMEMQ
Trigger: CTGCATTTCCATTTGAGTTCCTGAGGGAAGACCTCAATTACCATGACCCAACAGTGAAACACAGCACCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527484.5
CDS TCA 72 bp CTGAGAAGGGAGGTCACTTCCATAAGGTCATACAGCTaGGCAGAGACTGAAACTCTGTCTTCTGACACTCAA +
Preference number: 6 (lower is better)
Translates to: LRREVTSIRSYS*AETETLSSDTQ
Trigger: TTGAGTGTCAGAAGACAGAGTTTCAGTCTCTGCTCAGCTGTATGACCTTATGGAAGTGACCTCCCTTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532990.1
CDS TCA 72 bp CTCGTTAAAACTTTCTGGCTCCAGAGAGGAGGAAATTaGACCCTGAGAAGGGAGGTCACTTCCATAAGGTCA +
Preference number: 6 (lower is better)
Translates to: LVKTFWLQRGGN*TLRREVTSIRS
Trigger: TGACCTTATGGAAGTGACCTCCCTTCTCAGGGTTCAATTTCCTCCTCTCTGGAGCCAGAAAGTTTTAACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532990.1
CDS TCA 72 bp TCAATTCGGCAAAACTCTGGTTACCAACCACACAGCTaGTTTACTGGGCAATTCGGTGACACCAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SIRQNSGYQPHS*FTGQFGDTSFS
Trigger: TGAGAAGCTGGTGTCACCGAATTGCCCAGTAAATCAGCTGTGTGGTTGGTAACCAGAGTTTTGCCGAATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532990.1
CDS TCA 72 bp GTCAATTCGGCAAAACTATTCCCAGCAAGTCCATGCTaGTTGTTGTCAGGAAACACTAGTTCTCCACATGGC +
Preference number: 6 (lower is better)
Translates to: VNSAKLFPASPC*LLSGNTSSPHG
Trigger: GCCATGTGGAGAACTAGTGTTTCCTGACAACAATCAGCATGGACTTGCTGGGAATAGTTTTGCCGAATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524822.5
CDS GCA 72 bp CTTATTTTGTCCAATATAGGAAATGCAAAGGTAGCCTaGTGTGTCTCTTGTAGGATGGAGTATGTGGAAAAA +
Preference number: 6 (lower is better)
Translates to: LILSNIGNAKVA*CVSCRMEYVEK
Trigger: TTTTTCCACATACTCCATCCTACAAGAGACACAGCAGGCTACCTTTGCATTTCCTATATTGGACAAAATAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532990.1