RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STIL (Homo sapiens)

Ensembl gene IDs: ENSG00000123473

Ensembl transcript IDs: ENST00000337817.10, ENST00000337817.9, ENST00000360380.7, ENST00000371877.8, ENST00000396221.6, ENST00000413565.1, ENST00000418131.1, ENST00000433827.2, ENST00000436811.2, ENST00000447475.7, ENST00000682165.1, ENST00000682940.1, ENST00000682977.1, ENST00000683977.1, ENST00000684618.1

Found 547 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCTATCACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTaGCTGCTACCAAGAAACAGTGACTCCAGAATGATCAGGAGCCTT +
Preference number: 1 (lower is better)
Translates to: VLSPASHLTEVTLPN*LLPRNSDSRMIRSL
Trigger: AAGGCTCCTGATCATTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTGATAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337817.9
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
3UTR-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGTCACTCTTCCCAATTaGCTGCTACCAAGAAACAGT +
Preference number: 2 (lower is better)
Translates to: DLELDSICLLLKLVGITDVTLPN*LLPRNS
Trigger: ACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGAC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337817.9
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
3UTR TCA 72 bp AGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTaGCTCCAGAATGATCAGGAGCCTTGTGGTAGGCTC +
Preference number: 3 (lower is better)
Translates to: SHSSQLAATKKQ*LQNDQEPCGRL
Trigger: GAGCCTACCACAAGGCTCCTGATCATTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337817.9
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTCCGGCCCCGCCTCTaGGACGTTGGGGTCGCGGGA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLRPRL*DVGVAG
Trigger: TCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTCCGGCCCCGCCTCTaGGACGTTGGGGTCGCGGGA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELRPRL*DVGVAG
Trigger: TCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATCACTGCTTCTGGGCTaGTGCATGCCAACACACTGG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESLLLG*CMPTHW
Trigger: CCAGTGTGTTGGCATGCATCAGCCCAGAAGCAGTGA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTGAGATCCTGCCATTaGACTCCAGCCTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELRSCH*TPAWAT
Trigger: TGTAGCCCAGGCTGGAGTGCAATGGCAGGATCTCAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGCAGAGGTTGCAGTaGTCTGAGATCCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQERQRLQ*SEILPL
Trigger: CAATGGCAGGATCTCAGATCACTGCAACCTCTGCCT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGCAGGAAAATCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESRKIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTTTCCTGCT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCGTGTGGTTGGGACTaGGGGGCAAGAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSCGWD*GAREDC
Trigger: GCAGTCTTCTCTTGCCCCGCAGTCCCAACCACACGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATGTGGGGAGAACAACTaGCCATATCTCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQECGENN*PYLPEV
Trigger: GACCTCAGGGAGATATGGGCAGTTGTTCTCCCCACA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATCTTGGGTGTGTGCATaGACACTGTGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESWVCA*TLCKAV
Trigger: CACAGCCTTGCACAGTGTGCATGCACACACCCAAGA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATCAGTCTTGGGTGTGTaGATGCACACTGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESVLGV*MHTVQG
Trigger: GCCTTGCACAGTGTGCATGCACACACCCAAGACTGA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTGATCTGAGATCCTaGCATTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESDLRS*HCTPAW
Trigger: CCAGGCTGGAGTGCAATGGCAGGATCTCAGATCACT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTGGCGTATCTGCGTTaGTCCCCACAGATTCACAGT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELAYLR*SPQIHS
Trigger: ACTGTGAATCTGTGGGGACCAACGCAGATACGCCAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCACTGCTTCTGGGCTaGTGCATGCCAACACACTGG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSLLLG*CMPTHW
Trigger: CCAGTGTGTTGGCATGCATCAGCCCAGAAGCAGTGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGGCAGAGGTTGCAGTaGTCTGAGATCCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKRQRLQ*SEILPL
Trigger: CAATGGCAGGATCTCAGATCACTGCAACCTCTGCCT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGCAGGAAAATCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSRKIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTTTCCTGCT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGGCGGGTGGATCACCTaGAGTCAGGATTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAGGWIT*SQDFQT
Trigger: GGTCTGGAAATCCTGACTTCAGGTGATCCACCCGCC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCGTGTGGTTGGGACTaGGGGGCAAGAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASCGWD*GAREDC
Trigger: GCAGTCTTCTCTTGCCCCGCAGTCCCAACCACACGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCGTGTGGTTGGGACTaGGGGGCAAGAGAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESCGWD*GAREDC
Trigger: GCAGTCTTCTCTTGCCCCGCAGTCCCAACCACACGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATGTGGGGAGAACAACTaGCCATATCTCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKCGENN*PYLPEV
Trigger: GACCTCAGGGAGATATGGGCAGTTGTTCTCCCCACA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCTTGGGTGTGTGCATaGACACTGTGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSWVCA*TLCKAV
Trigger: CACAGCCTTGCACAGTGTGCATGCACACACCCAAGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGCTTTGGTAGACGGCTaGTCAGTTTCCTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEALVDG*SVSLEE
Trigger: TTCCTCCAAGGAAACTGAGCAGCCGTCTACCAAAGC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTCTGGGCTGATGCATaGCAACACACTGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFWADA*QHTGVI
Trigger: GATCACGCCAGTGTGTTGGCATGCATCAGCCCAGAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACAATACTGGCGTATCTaGGTTGGTCCCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEQYWRI*VGPHRF
Trigger: GAATCTGTGGGGACCAACGCAGATACGCCAGTATTG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTGAGATCCTGCCATTaGACTCCAGCCTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLRSCH*TPAWAT
Trigger: TGTAGCCCAGGCTGGAGTGCAATGGCAGGATCTCAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCCAGGAGGCAGAGGTTaGAGTGATCTGAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDPGGRG*SDLRSC
Trigger: GCAGGATCTCAGATCACTGCAACCTCTGCCTCCTGG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATGCCAGCTGGCCACTTaGAAAGAACACAGGTACATC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQECQLAT*KEHRYI
Trigger: GATGTACCTGTGTTCTTTCCAAGTGGCCAGCTGGCA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATGCATGCCAACACACTaGCGTGATCCACGTTATGTG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQECMPTH*RDPRYV
Trigger: CACATAACGTGGATCACGCCAGTGTGTTGGCATGCA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGAGATCACTGCTTCTaGGCTGATGCATGCCAACAC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQERDHCF*ADACQH
Trigger: GTGTTGGCATGCATCAGCCCAGAAGCAGTGATCTCT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTGGCGTATCTGCGTTaGTCCCCACAGATTCACAGT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLAYLR*SPQIHS
Trigger: ACTGTGAATCTGTGGGGACCAACGCAGATACGCCAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGGGGAGTAGGTATCTaGAGTTCCATTGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGGVGI*SSIGLP
Trigger: AGGAAGACCAATGGAACTTCAGATACCTACTCCCCC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGCCAACACACTGGCGTaGTCCACGTTATGTGCATTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKANTLA*STLCAF
Trigger: AAATGCACATAACGTGGATCACGCCAGTGTGTTGGC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCTCAGGATGTTGAGTaGACTCTGCTTTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSQDVE*TLLSRF
Trigger: GAACCGGGAAAGCAGAGTTCACTCAACATCCTGAGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATCCCTGGAAGTGATATaGACTCTTAGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESLEVI*TLRESS
Trigger: GCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGGGGCAAGAGAAGACTaGCTAGAATTAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEGARED*LELSVE
Trigger: CTCCACACTTAATTCTAGGCAGTCTTCTCTTGCCCC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGGGCATCAGAGACTGTaGTTCCAACAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEGHQRL*FQQTLN
Trigger: ATTCAGCGTTTGTTGGAAGCACAGTCTCTGATGCCC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTCTGGGCTGATGCATaGCAACACACTGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDFWADA*QHTGVI
Trigger: GATCACGCCAGTGTGTTGGCATGCATCAGCCCAGAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTCACTCTTGCTATCTaGATTGTCGGGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEFTLAI*IVGRFL
Trigger: GAGGAACCTCCCGACAATGCAGATAGCAAGAGTGAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACTGAGATCCTGCCATTaGACTCCAGCCTGGGCTACA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALRSCH*TPAWAT
Trigger: TGTAGCCCAGGCTGGAGTGCAATGGCAGGATCTCAG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACCAGGAGGCAGAGGTTaGAGTGATCTGAGATCCTGC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEPGGRG*SDLRSC
Trigger: GCAGGATCTCAGATCACTGCAACCTCTGCCTCCTGG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAACAAAATCGTGTGGTTaGGACTGCGGGGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKTKSCG*DCGARE
Trigger: TTCTCTTGCCCCGCAGTCCCAACCACACGATTTTGT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTTCAGAATTGTTACTaGCACCCCCTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEFQNCY*HPLLVQ
Trigger: CTGGACCAACAGGGGGTGCCAGTAACAATTCTGAAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGAGATCACTGCTTCTaGGCTGATGCATGCCAACAC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKRDHCF*ADACQH
Trigger: GTGTTGGCATGCATCAGCCCAGAAGCAGTGATCTCT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTGGCGTATCTGCGTTaGTCCCCACAGATTCACAGT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLAYLR*SPQIHS
Trigger: ACTGTGAATCTGTGGGGACCAACGCAGATACGCCAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATGCTTTAAAAGTCAATaGCTCATGTCAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQECFKSQ*LMSGAV
Trigger: CACCGCCCCTGACATGAGCCATTGACTTTTAAAGCA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTGCCCATATCTCCCTaGGGTCTCAAGGCTATAGGA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELPISP*GLKAIG
Trigger: TCCTATAGCCTTGAGACCTCAGGGAGATATGGGCAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACTGCCCATATCTCCCTaGGGTCTCAAGGCTATAGGA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALPISP*GLKAIG
Trigger: TCCTATAGCCTTGAGACCTCAGGGAGATATGGGCAG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTCTGTCTTGTTCTGTaGGGAACCGATATGCATCTG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKVCLVL*GTDMHL
Trigger: CAGATGCATATCGGTTCCTCACAGAACAAGACAGAC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTTGGTTCGATCGAGTaGCAGACAGTTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFGSIE*QTVVTA
Trigger: AGCTGTCACAACTGTCTGTCACTCGATCGAACCAAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCTTTCTCAGGATGTTaGGTGAACTCTGCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSFSGC*VNSAFP
Trigger: CGGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAGCAGGAAAATCGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASRKIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCGATTTTCCTGCT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCCCTGGAAGTGATATaGACTCTTAGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSLEVI*TLRESS
Trigger: GCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGGAAAGGTACCATCCTaGTTGAAGGAAACCTGGTAT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEGKVPS*LKETWY
Trigger: ATACCAGGTTTCCTTCAAGCAGGATGGTACCTTTCC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGGGCAAGAGAAGACTaGCTAGAATTAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGARED*LELSVE
Trigger: CTCCACACTTAATTCTAGGCAGTCTTCTCTTGCCCC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATGTGGGGAGAACAACTaGCCATATCTCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRACGENN*PYLPEV
Trigger: GACCTCAGGGAGATATGGGCAGTTGTTCTCCCCACA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATGTGCATGCACACTGTaGAAGGCTGTGGGTTACATA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKCACTL*KAVGYI
Trigger: TATGTAACCCACAGCCTTGCACAGTGTGCATGCACA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCTTGGGTGTGTGCATaGACACTGTGCAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASWVCA*TLCKAV
Trigger: CACAGCCTTGCACAGTGTGCATGCACACACCCAAGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCAGTCTTGGGTGTGTaGATGCACACTGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASVLGV*MHTVQG
Trigger: GCCTTGCACAGTGTGCATGCACACACCCAAGACTGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTCTTGATCCTCACCTaGTGCATTCCAAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELLILT*CIPKQA
Trigger: AGCTTGTTTTGGAATGCAGCAGGTGAGGATCAAGAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGCTTTGGTAGACGGCTaGTCAGTTTCCTTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDALVDG*SVSLEE
Trigger: TTCCTCCAAGGAAACTGAGCAGCCGTCTACCAAAGC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTCTGGGCTGATGCATaGCAACACACTGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEFWADA*QHTGVI
Trigger: GATCACGCCAGTGTGTTGGCATGCATCAGCCCAGAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACAGAGCTATAGCATTTaGCTCCATGCTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEQSYSI*LHAQIH
Trigger: GTGGATTTGAGCATGGAGGCAAATGCTATAGCTCTG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTCACTCTTGCTATCTaGATTGTCGGGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFTLAI*IVGRFL
Trigger: GAGGAACCTCCCGACAATGCAGATAGCAAGAGTGAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCAATACTGGCGTATCTaGGTTGGTCCCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDQYWRI*VGPHRF
Trigger: GAATCTGTGGGGACCAACGCAGATACGCCAGTATTG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGGTTCGAAGGTTCACTaGAGGACTTGGTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEGSKVH*RTWFKV
Trigger: AACCTTAAACCAAGTCCTGCAGTGAACCTTCGAACC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGTTACTGCTGCCCAATaGAAGTCAAATTCCACACTG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEVTAAQ*KSNSTL
Trigger: CAGTGTGGAATTTGACTTGCATTGGGCAGCAGTAAC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACATGCTTACACTTTCTaGCAGCTGGCCATTGGATAC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKHAYTF*QLAIGY
Trigger: GTATCCAATGGCCAGCTGGCAGAAAGTGTAAGCATG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGATAAGCAAGTCGGATaGTCTTCTCAGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEDKQVG*SSQSPQ
Trigger: TTGTGGTGACTGAGAAGACCATCCGACTTGCTTATC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATGTGGAACAGTAAGATaGCAGTGGGGGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKCGTVR*QWGSRY
Trigger: ATACCTACTCCCCCACTGCCATCTTACTGTTCCACA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCTTGCCACAGGCGATaGTTCAATATTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSCHRR*FNIAVG
Trigger: CCCCACAGCAATATTGAACCATCGCCTGTGGCAAGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTAGAGAAGAGCTGTTaGATACAGAAAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELEKSC*IQKVAG
Trigger: ACCAGCCACTTTCTGTATCCAACAGCTCTTCTCTAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371877.8
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTTCAGAATTGTTACTaGCACCCCCTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFQNCY*HPLLVQ
Trigger: CTGGACCAACAGGGGGTGCCAGTAACAATTCTGAAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTGCATGCCAACACACTaGCGTGATCCACGTTATGTG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDCMPTH*RDPRYV
Trigger: CACATAACGTGGATCACGCCAGTGTGTTGGCATGCA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGTCACTCTTCCCAATTaGCTGCTACCAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEVTLPN*LLPRNS
Trigger: ACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGAC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTGCCAGCTGGCCATTaGATACAGAAAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELPAGH*IQKVAG
Trigger: ACCAGCCACTTTCTGTATCCAATGGCCAGCTGGCAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGGTACCATCCTGCTTaGAGGAAACCTGGTATTCAT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKRYHPA*RKPGIH
Trigger: ATGAATACCAGGTTTCCTTCAAGCAGGATGGTACCT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTAGGCAGAGGGTTTaGTTCTATGAAATTGCCATC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESRQRV*FYEIAI
Trigger: GATGGCAATTTCATAGAATCAAACCCTCTGCCTACT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGGGGGAGTAGGTATCTaGAGTTCCATTGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAGGVGI*SSIGLP
Trigger: AGGAAGACCAATGGAACTTCAGATACCTACTCCCCC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACATCATTCCATTATCTaGCTCAGTCTTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKHHSII*LSLGCV
Trigger: CACACACCCAAGACTGAGTCAGATAATGGAATGATG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGTCTGTCTTGTTCTGTaGGGAACCGATATGCATCTG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDVCLVL*GTDMHL
Trigger: CAGATGCATATCGGTTCCTCACAGAACAAGACAGAC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGCCAACACACTGGCGTaGTCCACGTTATGTGCATTT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAANTLA*STLCAF
Trigger: AAATGCACATAACGTGGATCACGCCAGTGTGTTGGC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCTCAGGATGTTGAGTaGACTCTGCTTTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASQDVE*TLLSRF
Trigger: GAACCGGGAAAGCAGAGTTCACTCAACATCCTGAGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCTCAGGATGTTGAGTaGACTCTGCTTTCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESQDVE*TLLSRF
Trigger: GAACCGGGAAAGCAGAGTTCACTCAACATCCTGAGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCCTGGAAGTGATATaGACTCTTAGGGAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSLEVI*TLRESS
Trigger: GCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAACTCTCCCTGGAAGTaGTATGAACTCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQENSPWK*YELLGK
Trigger: TTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGAAAGTCAGGTATCTTaGCATCACAAGGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEESQVS*HHKGSI
Trigger: AATGCTTCCCTTGTGATGGCAAGATACCTGACTTTC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGATGCTGACAACACCTaGAAACGTTTGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKDADNT*KRLWNS
Trigger: ACTGTTCCACAAACGTTTGCAGGTGTTGTCAGCATC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTGTGTTTGCTCCTTaGCAAGAATTTAGCGGACTA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQETVFAP*QEFSGL
Trigger: TAGTCCGCTAAATTCTTGGCAAGGAGCAAACACAGT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGCGATGGTTCAATATTaGTGTGGGGAGAACAACTGC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDAMVQY*CGENNC
Trigger: GCAGTTGTTCTCCCCACAGCAATATTGAACCATCGC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACACACCTTTTCTCATGTaGAAGCCAGGGGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDTPFLM*KPGEDC
Trigger: ACAGTCTTCCCCTGGCTTGCACATGAGAAAAGGTGT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTGTGCTCACAGCAATaGTTACACCTTTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELCSQQ*LHLFSC
Trigger: ACATGAGAAAAGGTGTAAGCATTGCTGTGAGCACAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTGATCCTCACCTGCTaGATTCCAAAACAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLILTC*IPKQAS
Trigger: GCTAGCTTGTTTTGGAATGCAGCAGGTGAGGATCAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACAGTCTGTAAACACATaGTTACACTTTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEQSVNT*LHFLPA
Trigger: AGCTGGCAGAAAGTGTAAGCATGTGTTTACAGACTG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATGACTGATAATTACTaGTTTGGTAGACGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEMTDNY*FGRRLL
Trigger: GAGCAGCCGTCTACCAAAGCAGTAATTATCAGTCAT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGAGCTATAGCATTTaGCTCCATGCTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKQSYSI*LHAQIH
Trigger: GTGGATTTGAGCATGGAGGCAAATGCTATAGCTCTG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGTTCGAAGGTTCACTaGAGGACTTGGTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGSKVH*RTWFKV
Trigger: AACCTTAAACCAAGTCCTGCAGTGAACCTTCGAACC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAATGTTGAGTGAACTCTaGTTTCCCGGTTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKMLSEL*FPGSKV
Trigger: AACCTTCGAACCGGGAAAGCAGAGTTCACTCAACAT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTCTTCCCAATTGGCTaGTACCAAGAAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLFPIG*YQETVT
Trigger: AGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAACCTGGTATTCATCTaGGGCCGTGCAAAAGGATAT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKNLVFI*GRAKGY
Trigger: ATATCCTTTTGCACGGCCCCAGATGAATACCAGGTT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATGCTTGAAGGAAACCTaGTATTCATCTGGGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRACLKET*YSSGAV
Trigger: CACGGCCCCAGATGAATACCAGGTTTCCTTCAAGCA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAATCTCCAGTTGGCGTTaGGTTCCAAAGTGCACATTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKISSWR*VPKCTF
Trigger: AAATGTGCACTTTGGAACCCAACGCCAACTGGAGAT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGATGAAATCTCCAGTTaGCGTTGGGTTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDDEISS*RWVPKC
Trigger: GCACTTTGGAACCCAACGCCAACTGGAGATTTCATC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGATAAGCAAGTCGGATaGTCTTCTCAGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKDKQVG*SSQSPQ
Trigger: TTGTGGTGACTGAGAAGACCATCCGACTTGCTTATC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTTCTTATAGGCAGGTaGCTGTCTTACTTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEFLIGR*LSYFAV
Trigger: CACTGCAAAGTAAGACAGCCACCTGCCTATAAGAAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAACCTGCAAACGTTTGTaGAACAGTAAGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKTCKRL*NSKMAV
Trigger: CACTGCCATCTTACTGTTCCACAAACGTTTGCAGGT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTGGACATCTTGAATaGATCCAACTGTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQETGHLE*IQLCLL
Trigger: GAGCAAACACAGTTGGATCCATTCAAGATGTCCAGT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAATTACAGTACAGGGCTaGACATCCACTTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKITVQG*TSTWVK
Trigger: TTTCACCCAAGTGGATGTCCAGCCCTGTACTGTAAT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCTTGCCACAGGCGATaGTTCAATATTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESCHRR*FNIAVG
Trigger: CCCCACAGCAATATTGAACCATCGCCTGTGGCAAGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTATCTGACTCAGTCTTaGGTGTGTGCATGCACACTG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDYLTQS*VCACTL
Trigger: CAGTGTGCATGCACACACCCAAGACTGAGTCAGATA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCAAATCCACACCATTaGGGCTTAAGCCGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASNPHH*GLSRSC
Trigger: GCATGAGCGGCTTAAGCCCCAATGGTGTGGATTTGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGGGTCACAATTATTTTaGTTCGATCGAGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEGSQLF*FDRVTD
Trigger: GTCTGTCACTCGATCGAACCAAAATAATTGTGACCC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTCACTCTTCCCAATTaGCTGCTACCAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKVTLPN*LLPRNS
Trigger: ACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGAC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCTTGCCAGAGCTGTTaGAATAATGGGGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSCQSC*NNGDGL
Trigger: AAGCCCATCCCCATTATTCCAACAGCTCTGGCAAGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACCTTTAAAGCTGAACTaGAGTCATCTACACTGTGAA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEPLKLN*SHLHCE
Trigger: TTCACAGTGTAGATGACTTCAGTTCAGCTTTAAAGG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTACTGGTTAGCAACTaGAACCGAAAGTCAGGTATC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLLVSN*NRKSGI
Trigger: GATACCTGACTTTCGGTTTCAGTTGCTAACCAGTAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCAACACCAGAGTCGTaGTCATGTATTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSTPES*SCIGIF
Trigger: GAAGATGCCAATACATGATCACGACTCTGGTGTTGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCAGACTGGACATCTTaGATGGATCCAACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSDWTS*MDPTVF
Trigger: AAACACAGTTGGATCCATTCAAGATGTCCAGTCTGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTTGGTTCGATCGAGTaGCAGACAGTTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEFGSIE*QTVVTA
Trigger: AGCTGTCACAACTGTCTGTCACTCGATCGAACCAAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATTTGGTTCGATCGAGTaGCAGACAGTTGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAFGSIE*QTVVTA
Trigger: AGCTGTCACAACTGTCTGTCACTCGATCGAACCAAA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTAGAAGGCTCTTTCTaGCCACCAAGCTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELEGSF*PPSCSG
Trigger: ACCTGAACAGCTTGGTGGTCAGAAAGAGCCTTCTAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCTTTCTCAGGATGTTaGGTGAACTCTGCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASFSGC*VNSAFP
Trigger: CGGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGAAAGTCAGGTATCTTaGCATCACAAGGGAAGCATT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKESQVS*HHKGSI
Trigger: AATGCTTCCCTTGTGATGGCAAGATACCTGACTTTC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGATGCTGACAACACCTaGAAACGTTTGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDDADNT*KRLWNS
Trigger: ACTGTTCCACAAACGTTTGCAGGTGTTGTCAGCATC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAACTGTGTTTGCTCCTTaGCAAGAATTTAGCGGACTA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKTVFAP*QEFSGL
Trigger: TAGTCCGCTAAATTCTTGGCAAGGAGCAAACACAGT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATGTGCATGCACACTGTaGAAGGCTGTGGGTTACATA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPECACTL*KAVGYI
Trigger: TATGTAACCCACAGCCTTGCACAGTGTGCATGCACA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAACACCTTTTCTCATGTaGAAGCCAGGGGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPETPFLM*KPGEDC
Trigger: ACAGTCTTCCCCTGGCTTGCACATGAGAAAAGGTGT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTGTGCTCACAGCAATaGTTACACCTTTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLCSQQ*LHLFSC
Trigger: ACATGAGAAAAGGTGTAAGCATTGCTGTGAGCACAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTGATCCTCACCTGCTaGATTCCAAAACAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLILTC*IPKQAS
Trigger: GCTAGCTTGTTTTGGAATGCAGCAGGTGAGGATCAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTCTTGATCCTCACCTaGTGCATTCCAAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLLILT*CIPKQA
Trigger: AGCTTGTTTTGGAATGCAGCAGGTGAGGATCAAGAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTTCCACAGCAATGTTaGTCTCTTCAAAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLPQQC*SLQNWE
Trigger: TTCCCAGTTTTGAAGAGAGCAACATTGCTGTGGAAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACATGCTTACACTTTCTaGCAGCTGGCCACTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAHAYTF*QLATWK
Trigger: TTTCCAAGTGGCCAGCTGGCAGAAAGTGTAAGCATG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTTCACTATTGTCACTaGTTTGTAGGAGTCCATATC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELHYCH*FVGVHI
Trigger: GATATGGACTCCTACAAAGCAGTGACAATAGTGAAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTCACTCTTGCTATCTaGATTGTCGGGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEFTLAI*IVGRFL
Trigger: GAGGAACCTCCCGACAATGCAGATAGCAAGAGTGAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATGTTGAGTGAACTCTaGTTTCCCGGTTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDMLSEL*FPGSKV
Trigger: AACCTTCGAACCGGGAAAGCAGAGTTCACTCAACAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATCTCCAGTTGGCGTTaGGTTCCAAAGTGCACATTT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDISSWR*VPKCTF
Trigger: AAATGTGCACTTTGGAACCCAACGCCAACTGGAGAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGATGAAATCTCCAGTTaGCGTTGGGTTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRADEISS*RWVPKC
Trigger: GCACTTTGGAACCCAACGCCAACTGGAGATTTCATC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTTCACAACGGATTaGATTTTTGTCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKQFTTD*IFVRRF
Trigger: GAACCTCCTGACAAAAATCCAATCCGTTGTGAACTG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAAGCTGGGGTTGCAATaGCTTCAAGTGTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAKLGLQ*LQVFQV
Trigger: CACTTGGAACACTTGAAGCCATTGCAACCCCAGCTT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAAGCTGGGGTTGCAATaGCTTCAAGTGTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEKLGLQ*LQVFQV
Trigger: CACTTGGAACACTTGAAGCCATTGCAACCCCAGCTT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATGTGGAACAGTAAGATaGCAGTGGGGGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRACGTVR*QWGSRY
Trigger: ATACCTACTCCCCCACTGCCATCTTACTGTTCCACA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATGTGGAACAGTAAGATaGCAGTGGGGGAGTAGGTAT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPECGTVR*QWGSRY
Trigger: ATACCTACTCCCCCACTGCCATCTTACTGTTCCACA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGGTTCAATATTGCTGTaGGGAGAACAACTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDGSILL*GEQLPI
Trigger: TATGGGCAGTTGTTCTCCCCACAGCAATATTGAACC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATATCTGACTCAGTCTTaGGTGTGTGCATGCACACTG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAYLTQS*VCACTL
Trigger: CAGTGTGCATGCACACACCCAAGACTGAGTCAGATA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAACACTTTCTGCCAGCTaGCCACTTGGAAAGAACACA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRATLSAS*PLGKNT
Trigger: TGTGTTCTTTCCAAGTGGCCAGCTGGCAGAAAGTGT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATTTCAGAATTGTTACTaGCACCCCCTGTTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAFQNCY*HPLLVQ
Trigger: CTGGACCAACAGGGGGTGCCAGTAACAATTCTGAAA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGCTGCTCAGTTTCCTTaGAGGAACTATTTAATAGGT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEAAQFP*RNYLIG
Trigger: ACCTATTAAATAGTTCCTCCAAGGAAACTGAGCAGC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGGTCACAATTATTTTaGTTCGATCGAGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGSQLF*FDRVTD
Trigger: GTCTGTCACTCGATCGAACCAAAATAATTGTGACCC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAATATTTCTCAATACTaGCGTATCTGCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKNISQY*RICVGP
Trigger: GGGACCAACGCAGATACGCCAGTATTGAGAAATATT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCTTGCCAGAGCTGTTaGAATAATGGGGATGGGCTT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASCQSC*NNGDGL
Trigger: AAGCCCATCCCCATTATTCCAACAGCTCTGGCAAGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACACACTTTCTGCCAGCTaGCCATTGGATACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDTLSAS*PLDTES
Trigger: ACTTTCTGTATCCAATGGCCAGCTGGCAGAAAGTGT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACCTTTAAAGCTGAACTaGAGTCATCTACACTGTGAA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKPLKLN*SHLHCE
Trigger: TTCACAGTGTAGATGACTTCAGTTCAGCTTTAAAGG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTTGAACAGAAGAATTaGATATGTATCGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELEQKN*ICIANS
Trigger: GCTGTTTGCGATACATATTCAATTCTTCTGTTCAAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAGTAGGCAGAGGGTTTaGTTCTATGAAATTGCCATC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSRQRV*FYEIAI
Trigger: GATGGCAATTTCATAGAATCAAACCCTCTGCCTACT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTATCCTGGTTTAACTaGTTTGGTATTCCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELSWFN*FGIPLK
Trigger: CTTGAGAGGAATACCAAATCAGTTAAACCAGGATAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCAGACTGGACATCTTaGATGGATCCAACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSDWTS*MDPTVF
Trigger: AAACACAGTTGGATCCATTCAAGATGTCCAGTCTGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAATAATGAATGCTTTTaGAGGGCTTCAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKNNECF*RASDWT
Trigger: TGTCCAGTCTGAAGCCCTTCAAAAGCATTCATTATT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACATCATTCCATTATCTaGCTCAGTCTTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEHHSII*LSLGCV
Trigger: CACACACCCAAGACTGAGTCAGATAATGGAATGATG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAATTTTCTGGTTATCTaGTGGTTGATGAAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKNFLVI*WLMKQG
Trigger: CCCTTGCTTCATCAACCATCAGATAACCAGAAAATT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAACTCTCCCTGGAAGTaGTATGAACTCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDNSPWK*YELLGK
Trigger: TTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDELRSV*RVGAGA
Trigger: GGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGGAAAGGTACCATCCTaGTTGAAGGAAACCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEGKVPS*LKETWY
Trigger: ATACCAGGTTTCCTTCAAGCAGGATGGTACCTTTCC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTCCAAGGAATCTTTaGTACATATATGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQESPRNL*YIYGTV
Trigger: TACAGTGCCATATATGTAGCAAAGATTCCTTGGACT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGATGCTGACAACACCTaGAAACGTTTGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEDADNT*KRLWNS
Trigger: ACTGTTCCACAAACGTTTGCAGGTGTTGTCAGCATC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATTTGTCTTCCAGCTTaGACTGTGTCTTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDICLPA*TVSSTA
Trigger: TGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTCTTGATCCTCACCTaGTGCATTCCAAAACAAGCT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELLILT*CIPKQA
Trigger: AGCTTGTTTTGGAATGCAGCAGGTGAGGATCAAGAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGGGTTGCATTACATaGTCAATTTTTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEKGCIT*SIFGSS
Trigger: AGAGGAACCAAAAATTGAGCATGTAATGCAACCCTT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATGACTGATAATTACTaGTTTGGTAGACGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDMTDNY*FGRRLL
Trigger: GAGCAGCCGTCTACCAAAGCAGTAATTATCAGTCAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACAGAGCTATAGCATTTaGCTCCATGCTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAQSYSI*LHAQIH
Trigger: GTGGATTTGAGCATGGAGGCAAATGCTATAGCTCTG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTCTTCCCAATTGGCTaGTACCAAGAAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELFPIG*YQETVT
Trigger: AGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGTTACTGCTGCCCAATaGAAGTCAAATTCCACACTG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEVTAAQ*KSNSTL
Trigger: CAGTGTGGAATTTGACTTGCATTGGGCAGCAGTAAC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGTTACTGCTGCCCAATaGAAGTCAAATTCCACACTG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAVTAAQ*KSNSTL
Trigger: CAGTGTGGAATTTGACTTGCATTGGGCAGCAGTAAC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAACCTGGTATTCATCTaGGGCCGTGCAAAAGGATAT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRANLVFI*GRAKGY
Trigger: ATATCCTTTTGCACGGCCCCAGATGAATACCAGGTT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGTCACCACAAGCTTTaGATTTCTGTAGTAACTGAG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSHHKL*ISVVTE
Trigger: CTCAGTTACTACAGAAATCCAAAGCTTGTGGTGACT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGTAATGTTTCCTTACTaGTTAGCAACTGAAACCGAA +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEVMFPY*LATETE
Trigger: TTCGGTTTCAGTTGCTAACCAGTAAGGAAACATTAC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCTGTTTCTGCATTTTaGCTTTCAGCGCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSVSAF*LSALSS
Trigger: TGAACTGAGCGCTGAAAGCCAAAATGCAGAAACAGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAATCTTCTGACTCACTaGATGAGGACTAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDNLLTH*MRTRNW
Trigger: CCAATTCCTAGTCCTCATCCAGTGAGTCAGAAGATT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACCCATTATGAGAAGATaGTTTAATACTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEPIMRR*FNTVPG
Trigger: ACCAGGAACAGTATTAAACCATCTTCTCATAATGGG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAACCTGCAAACGTTTGTaGAACAGTAAGATGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPETCKRL*NSKMAV
Trigger: CACTGCCATCTTACTGTTCCACAAACGTTTGCAGGT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAATTACAGTACAGGGCTaGACATCCACTTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEITVQG*TSTWVK
Trigger: TTTCACCCAAGTGGATGTCCAGCCCTGTACTGTAAT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGGTTCAATATTGCTGTaGGGAGAACAACTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEGSILL*GEQLPI
Trigger: TATGGGCAGTTGTTCTCCCCACAGCAATATTGAACC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGTCACTCTTCCCAATTaGCTGCTACCAAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAVTLPN*LLPRNS
Trigger: ACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGAC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTATCCAGACTTATaGAAAAGTCCCCATAATGCT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKQYPDL*KSPHNA
Trigger: AGCATTATGGGGACTTTTCCATAAGTCTGGATACTG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTACTGGTTAGCAACTaGAACCGAAAGTCAGGTATC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELLVSN*NRKSGI
Trigger: GATACCTGACTTTCGGTTTCAGTTGCTAACCAGTAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGAAGACCTCTTAATTaGAAAATTCTTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGRPLN*KILGSL
Trigger: AAGGCTTCCAAGAATTTTTCAATTAAGAGGTCTTCC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAGTAGGCAGAGGGTTTaGTTCTATGAAATTGCCATC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESRQRV*FYEIAI
Trigger: GATGGCAATTTCATAGAATCAAACCCTCTGCCTACT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTATCCTGGTTTAACTaGTTTGGTATTCCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLSWFN*FGIPLK
Trigger: CTTGAGAGGAATACCAAATCAGTTAAACCAGGATAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAATAATGAATGCTTTTaGAGGGCTTCAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDNNECF*RASDWT
Trigger: TGTCCAGTCTGAAGCCCTTCAAAAGCATTCATTATT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGGCTATAGGACTACTTaGAGAACAGAATGCATTACA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDGYRTT*RTECIT
Trigger: TGTAATGCATTCTGTTCTTCAAGTAGTCCTATAGCC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGTTCTGGTGCATTCATaGCTGATAATTACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDVLVHS*LIITAL
Trigger: CAAAGCAGTAATTATCAGTCATGAATGCACCAGAAC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGCTCTATTTGAACAATaGGAACTTAGTCCTATCACC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDALFEQ*ELSPIT
Trigger: GGTGATAGGACTAAGTTCTCATTGTTCAAATAGAGC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAACTCTCCCTGGAAGTaGTATGAACTCTTAGGGAAA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPENSPWK*YELLGK
Trigger: TTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAATTTGTCTTCCAGCTTaGACTGTGTCTTCAACAGCA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEICLPA*TVSSTA
Trigger: TGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAAT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTGTGCTCACAGCAATaGTTACACCTTTTCTCATGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELCSQQ*LHLFSC
Trigger: ACATGAGAAAAGGTGTAAGCATTGCTGTGAGCACAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTTCCACAGCAATGTTaGTCTCTTCAAAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELPQQC*SLQNWE
Trigger: TTCCCAGTTTTGAAGAGAGCAACATTGCTGTGGAAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACAGTCTGTAAACACATaGTTACACTTTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEQSVNT*LHFLPA
Trigger: AGCTGGCAGAAAGTGTAAGCATGTGTTTACAGACTG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTTCACTATTGTCACTaGTTTGTAGGAGTCCATATC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLHYCH*FVGVHI
Trigger: GATATGGACTCCTACAAAGCAGTGACAATAGTGAAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAATAAATATTCACTCTTaGTATCTGCATTGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKINIHS*YLHCRE
Trigger: CTCCCGACAATGCAGATAGCAAGAGTGAATATTTAT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTCATGCTATTCATCTaGTTTAGCGTTTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFMLFI*FSVSEG
Trigger: ACCTTCTGAAACGCTAAAGCAGATGAATAGCATGAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTAATGTTTCCTTACTaGTTAGCAACTGAAACCGAA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKVMFPY*LATETE
Trigger: TTCGGTTTCAGTTGCTAACCAGTAAGGAAACATTAC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACAGTTCACAACGGATTaGATTTTTGTCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAQFTTD*IFVRRF
Trigger: GAACCTCCTGACAAAAATCCAATCCGTTGTGAACTG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCTGTTTCTGCATTTTaGCTTTCAGCGCTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESVSAF*LSALSS
Trigger: TGAACTGAGCGCTGAAAGCCAAAATGCAGAAACAGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAATGAGGACTAGGAATTaGTCTTGGAGAAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKMRTRN*SWRKIF
Trigger: GAAGATTTTTCTCCAAGACCAATTCCTAGTCCTCAT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAATCTTCTGACTCACTaGATGAGGACTAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRANLLTH*MRTRNW
Trigger: CCAATTCCTAGTCCTCATCCAGTGAGTCAGAAGATT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTTCTTATAGGCAGGTaGCTGTCTTACTTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEFLIGR*LSYFAV
Trigger: CACTGCAAAGTAAGACAGCCACCTGCCTATAAGAAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAATATATCATGAGATaGCCCATTATGAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEKYIMR*PIMRRW
Trigger: CCATCTTCTCATAATGGGCCATCTCATGATATATTT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAACTGGACATCTTGAATaGATCCAACTGTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRATGHLE*IQLCLL
Trigger: GAGCAAACACAGTTGGATCCATTCAAGATGTCCAGT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGATACAGAAAGTGGCTaGTTAAATTCTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKDTESG*LNSSST
Trigger: TGTGGAAGAAGAATTTAACCAGCCACTTTCTGTATC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGGGTCACAATTATTTTaGTTCGATCGAGTGACAGAC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEGSQLF*FDRVTD
Trigger: GTCTGTCACTCGATCGAACCAAAATAATTGTGACCC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAATGGAGAAGGCTGAATaGGTCACAATTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKMEKAE*VTIILV
Trigger: AACCAAAATAATTGTGACCCATTCAGCCTTCTCCAT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAATATTTCTCAATACTaGCGTATCTGCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPENISQY*RICVGP
Trigger: GGGACCAACGCAGATACGCCAGTATTGAGAAATATT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACAACTAGAGAAGAGTTaGATACAGAAAGTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAQLEKS*IQKVAG
Trigger: ACCAGCCACTTTCTGTATCCAACTCTTCTCTAGTTG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360380.7
CDS-3UTR CCA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTGGATACAGAAAGTaGCTGGTTAAATTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEIGYRK*LVKFFF
Trigger: GAAGAAGAATTTAACCAGCCACTTTCTGTATCCAAT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTCCATGATGTCTGGTaGATGATTTCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLHDVW*MISLIP
Trigger: TGGAATTAAAGAAATCATTCACCAGACATCATGGAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGGAAGACCTCTTAATTaGAAAATTCTTGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDGRPLN*KILGSL
Trigger: AAGGCTTCCAAGAATTTTTCAATTAAGAGGTCTTCC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGGCTATAGGACTACTTaGAGAACAGAATGCATTACA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEGYRTT*RTECIT
Trigger: TGTAATGCATTCTGTTCTTCAAGTAGTCCTATAGCC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGGCTATAGGACTACTTaGAGAACAGAATGCATTACA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAGYRTT*RTECIT
Trigger: TGTAATGCATTCTGTTCTTCAAGTAGTCCTATAGCC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAATTTTCTGGTTATCTaGTGGTTGATGAAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPENFLVI*WLMKQG
Trigger: CCCTTGCTTCATCAACCATCAGATAACCAGAAAATT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGTTCTGGTGCATTCATaGCTGATAATTACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEVLVHS*LIITAL
Trigger: CAAAGCAGTAATTATCAGTCATGAATGCACCAGAAC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCACTGCTTCTGGGCTaGTGCATGCCAACACACTGG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDSLLLG*CMPTHW
Trigger: CCAGTGTGTTGGCATGCATCAGCCCAGAAGCAGTGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGCTCTATTTGAACAATaGGAACTTAGTCCTATCACC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAALFEQ*ELSPIT
Trigger: GGTGATAGGACTAAGTTCTCATTGTTCAAATAGAGC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGAAAAACTCTGTTTCTaGATTTTGGCTTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAEKLCF*ILAFSA
Trigger: AGCGCTGAAAGCCAAAATGCAGAAACAGAGTTTTTC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACCAAGGCTTCTTAGTTaGTTAAGAGTTGCATTAAGG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEPRLLS*LRVALR
Trigger: CCTTAATGCAACTCTTAAGCAACTAAGAAGCCTTGG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACCAAGGCTTCTTAGTTaGTTAAGAGTTGCATTAAGG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAPRLLS*LRVALR
Trigger: CCTTAATGCAACTCTTAAGCAACTAAGAAGCCTTGG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACTTCACTATTGTCACTaGTTTGTAGGAGTCCATATC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALHYCH*FVGVHI
Trigger: GATATGGACTCCTACAAAGCAGTGACAATAGTGAAG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAGTCACCACAAGCTTTaGATTTCTGTAGTAACTGAG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESHHKL*ISVVTE
Trigger: CTCAGTTACTACAGAAATCCAAAGCTTGTGGTGACT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATGAGGACTAGGAATTaGTCTTGGAGAAAAATCTTC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDMRTRN*SWRKIF
Trigger: GAAGATTTTTCTCCAAGACCAATTCCTAGTCCTCAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTCAAGTGTTCCAAGTaGTTAATCAAAGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFKCSK*LIKGGF
Trigger: AAATCCTCCTTTGATTAACCACTTGGAACACTTGAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGATACAGAAAGTGGCTaGTTAAATTCTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDDTESG*LNSSST
Trigger: TGTGGAAGAAGAATTTAACCAGCCACTTTCTGTATC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGTTGGATACAGAAAGTaGCTGGTTAAATTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDVGYRK*LVKFFF
Trigger: GAAGAAGAATTTAACCAGCCACTTTCTGTATCCAAC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGCTGCTCAGTTTCCTTaGAGGAACTATTTAATAGGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEAAQFP*RNYLIG
Trigger: ACCTATTAAATAGTTCCTCCAAGGAAACTGAGCAGC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACAGTATCCAGACTTATaGAAAAGTCCCCATAATGCT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAQYPDL*KSPHNA
Trigger: AGCATTATGGGGACTTTTCCATAAGTCTGGATACTG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACTCCATGATGTCTGGTaGATGATTTCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALHDVW*MISLIP
Trigger: TGGAATTAAAGAAATCATTCACCAGACATCATGGAG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTCCATGATGTCTGGTaGATGATTTCTTTAATTCCA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELHDVW*MISLIP
Trigger: TGGAATTAAAGAAATCATTCACCAGACATCATGGAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACTTGAACAGAAGAATTaGATATGTATCGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALEQKN*ICIANS
Trigger: GCTGTTTGCGATACATATTCAATTCTTCTGTTCAAG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAGGCAGAGGTTGCAGTaGTCTGAGATCCTGCCATTG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDRQRLQ*SEILPL
Trigger: CAATGGCAGGATCTCAGATCACTGCAACCTCTGCCT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAGTCCAAGGAATCTTTaGTACATATATGGCACTGTA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASPRNL*YIYGTV
Trigger: TACAGTGCCATATATGTAGCAAAGATTCCTTGGACT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAAATATTCAGATTACTaGTCAAGTTTCTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDKYSDY*SSFLPE
Trigger: CTCTGGCAAGAAACTTGAGCAGTAATCTGAATATTT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAAGGGTTGCATTACATaGTCAATTTTTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEKGCIT*SIFGSS
Trigger: AGAGGAACCAAAAATTGAGCATGTAATGCAACCCTT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAAGGGTTGCATTACATaGTCAATTTTTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAKGCIT*SIFGSS
Trigger: AGAGGAACCAAAAATTGAGCATGTAATGCAACCCTT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAATAAATATTCACTCTTaGTATCTGCATTGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAINIHS*YLHCRE
Trigger: CTCCCGACAATGCAGATAGCAAGAGTGAATATTTAT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTCATGCTATTCATCTaGTTTAGCGTTTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEFMLFI*FSVSEG
Trigger: ACCTTCTGAAACGCTAAAGCAGATGAATAGCATGAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCTTTGCTACATATATaGCACTGTAGAGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDSLLHI*HCRAFK
Trigger: TTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGTAGAGAATAAACCTTaGGATCAGATTCCAACAAAA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDVENKP*DQIPTK
Trigger: TTTTGTTGGAATCTGATCCCAAGGTTTATTCTCTAC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGTAATGTTTCCTTACTaGTTAGCAACTGAAACCGAA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEVMFPY*LATETE
Trigger: TTCGGTTTCAGTTGCTAACCAGTAAGGAAACATTAC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTCAAGTGTTCCAAGTaGTTAATCAAAGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDFKCSK*LIKGGF
Trigger: AAATCCTCCTTTGATTAACCACTTGGAACACTTGAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACCCATTATGAGAAGATaGTTTAATACTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEPIMRR*FNTVPG
Trigger: ACCAGGAACAGTATTAAACCATCTTCTCATAATGGG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACCCATTATGAGAAGATaGTTTAATACTGTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAPIMRR*FNTVPG
Trigger: ACCAGGAACAGTATTAAACCATCTTCTCATAATGGG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTGCTCTCTTCAAAACTaGGAATATCAACTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDCSLQN*EYQLLL
Trigger: TAAAAGCAGTTGATATTCCCAGTTTTGAAGAGAGCA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGATACAGAAAGTGGCTaGTTAAATTCTTCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEDTESG*LNSSST
Trigger: TGTGGAAGAAGAATTTAACCAGCCACTTTCTGTATC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGCCAACACACTGGCGTaGTCCACGTTATGTGCATTT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDANTLA*STLCAF
Trigger: AAATGCACATAACGTGGATCACGCCAGTGTGTTGGC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCAATACTGGCGTATCTaGGTTGGTCCCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDQYWRI*VGPHRF
Trigger: GAATCTGTGGGGACCAACGCAGATACGCCAGTATTG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATGCAGAGATGCAACATaGTGGAACTTCTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPECRDAT*WNFLKY
Trigger: ATATTTTAAGAAGTTCCAGCATGTTGCATCTCTGCA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR GCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATGCAGAGATGCAACATaGTGGAACTTCTTAAAATAT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRACRDAT*WNFLKY
Trigger: ATATTTTAAGAAGTTCCAGCATGTTGCATCTCTGCA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCTTTGCTACATATATaGCACTGTAGAGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESLLHI*HCRAFK
Trigger: TTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCTTTGCTACATATATaGCACTGTAGAGCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASLLHI*HCRAFK
Trigger: TTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGTAGAGAATAAACCTTaGGATCAGATTCCAACAAAA +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEVENKP*DQIPTK
Trigger: TTTTGTTGGAATCTGATCCCAAGGTTTATTCTCTAC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATTCAAGTGTTCCAAGTaGTTAATCAAAGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAFKCSK*LIKGGF
Trigger: AAATCCTCCTTTGATTAACCACTTGGAACACTTGAA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAAATATATCATGAGATaGCCCATTATGAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEKYIMR*PIMRRW
Trigger: CCATCTTCTCATAATGGGCCATCTCATGATATATTT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAAATATATCATGAGATaGCCCATTATGAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAKYIMR*PIMRRW
Trigger: CCATCTTCTCATAATGGGCCATCTCATGATATATTT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATACAAAATCGTGTGGTTaGGACTGCGGGGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDTKSCG*DCGARE
Trigger: TTCTCTTGCCCCGCAGTCCCAACCACACGATTTTGT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCTTGCCACAGGCGATaGTTCAATATTGCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDSCHRR*FNIAVG
Trigger: CCCCACAGCAATATTGAACCATCGCCTGTGGCAAGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATGCTCTCTTCAAAACTaGGAATATCAACTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PVFPKYLQETPCPCIKRACSLQN*EYQLLL
Trigger: TAAAAGCAGTTGATATTCCCAGTTTTGAAGAGAGCA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTGCCAGCTGGCCACTTaGAAAGAACACAGGTACATC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDCQLAT*KEHRYI
Trigger: GATGTACCTGTGTTCTTTCCAAGTGGCCAGCTGGCA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCAAATCCACACCATTaGGGCTTAAGCCGCTCATGC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDSNPHH*GLSRSC
Trigger: GCATGAGCGGCTTAAGCCCCAATGGTGTGGATTTGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGTCTGTCTTGTTCTGTaGGGAACCGATATGCATCTG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDVCLVL*GTDMHL
Trigger: CAGATGCATATCGGTTCCTCACAGAACAAGACAGAC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTTAGAAGGCTCTTTCTaGCCACCAAGCTGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDLEGSF*PPSCSG
Trigger: ACCTGAACAGCTTGGTGGTCAGAAAGAGCCTTCTAA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCTTTCTCAGGATGTTaGGTGAACTCTGCTTTCCCG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDSFSGC*VNSAFP
Trigger: CGGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGGGGCAAGAGAAGACTaGCTAGAATTAAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDGARED*LELSVE
Trigger: CTCCACACTTAATTCTAGGCAGTCTTCTCTTGCCCC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGCGATGGTTCAATATTaGTGTGGGGAGAACAACTGC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDAMVQY*CGENNC
Trigger: GCAGTTGTTCTCCCCACAGCAATATTGAACCATCGC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTGTGCATGCACACTGTaGAAGGCTGTGGGTTACATA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDCACTL*KAVGYI
Trigger: TATGTAACCCACAGCCTTGCACAGTGTGCATGCACA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGGGCATCAGAGACTGTaGTTCCAACAAACGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDGHQRL*FQQTLN
Trigger: ATTCAGCGTTTGTTGGAAGCACAGTCTCTGATGCCC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATACACCTTTTCTCATGTaGAAGCCAGGGGAAGACTGT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDTPFLM*KPGEDC
Trigger: ACAGTCTTCCCCTGGCTTGCACATGAGAAAAGGTGT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCATGCTTACACTTTCTaGCAGCTGGCCACTTGGAAA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDHAYTF*QLATWK
Trigger: TTTCCAAGTGGCCAGCTGGCAGAAAGTGTAAGCATG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGATGAAATCTCCAGTTaGCGTTGGGTTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDDEISS*RWVPKC
Trigger: GCACTTTGGAACCCAACGCCAACTGGAGATTTCATC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAAGCTGGGGTTGCAATaGCTTCAAGTGTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDKLGLQ*LQVFQV
Trigger: CACTTGGAACACTTGAAGCCATTGCAACCCCAGCTT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATACACTTTCTGCCAGCTaGCCACTTGGAAAGAACACA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDTLSAS*PLGKNT
Trigger: TGTGTTCTTTCCAAGTGGCCAGCTGGCAGAAAGTGT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTGCTTTAAAAGTCAATaGCTCATGTCAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDCFKSQ*LMSGAV
Trigger: CACCGCCCCTGACATGAGCCATTGACTTTTAAAGCA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAGGTACCATCCTGCTTaGAGGAAACCTGGTATTCAT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDRYHPA*RKPGIH
Trigger: ATGAATACCAGGTTTCCTTCAAGCAGGATGGTACCT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCAACACCAGAGTCGTaGTCATGTATTGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDSTPES*SCIGIF
Trigger: GAAGATGCCAATACATGATCACGACTCTGGTGTTGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGGTTCGAAGGTTCACTaGAGGACTTGGTTTAAGGTT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDGSKVH*RTWFKV
Trigger: AACCTTAAACCAAGTCCTGCAGTGAACCTTCGAACC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATATGTTGAGTGAACTCTaGTTTCCCGGTTCGAAGGTT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDMLSEL*FPGSKV
Trigger: AACCTTCGAACCGGGAAAGCAGAGTTCACTCAACAT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCTCTTCCCAATTGGCTaGTACCAAGAAACAGTGACT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDLFPIG*YQETVT
Trigger: AGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGATAAGCAAGTCGGATaGTCTTCTCAGTCACCACAA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDDKQVG*SSQSPQ
Trigger: TTGTGGTGACTGAGAAGACCATCCGACTTGCTTATC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTTACTGGTTAGCAACTaGAACCGAAAGTCAGGTATC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDLLVSN*NRKSGI
Trigger: GATACCTGACTTTCGGTTTCAGTTGCTAACCAGTAA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCTTCCACAGCAATGTTaGTCTCTTCAAAACTGGGAA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDLPQQC*SLQNWE
Trigger: TTCCCAGTTTTGAAGAGAGCAACATTGCTGTGGAAG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCAGTCTGTAAACACATaGTTACACTTTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDQSVNT*LHFLPA
Trigger: AGCTGGCAGAAAGTGTAAGCATGTGTTTACAGACTG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATATGACTGATAATTACTaGTTTGGTAGACGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDMTDNY*FGRRLL
Trigger: GAGCAGCCGTCTACCAAAGCAGTAATTATCAGTCAT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCAGTTCACAACGGATTaGATTTTTGTCAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDQFTTD*IFVRRF
Trigger: GAACCTCCTGACAAAAATCCAATCCGTTGTGAACTG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAATCTTCTGACTCACTaGATGAGGACTAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDNLLTH*MRTRNW
Trigger: CCAATTCCTAGTCCTCATCCAGTGAGTCAGAAGATT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTTTCTTATAGGCAGGTaGCTGTCTTACTTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDFLIGR*LSYFAV
Trigger: CACTGCAAAGTAAGACAGCCACCTGCCTATAAGAAA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATACTGGACATCTTGAATaGATCCAACTGTGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDTGHLE*IQLCLL
Trigger: GAGCAAACACAGTTGGATCCATTCAAGATGTCCAGT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAATATTTCTCAATACTaGCGTATCTGCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDNISQY*RICVGP
Trigger: GGGACCAACGCAGATACGCCAGTATTGAGAAATATT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAATAATGAATGCTTTTaGAGGGCTTCAGACTGGACA +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDNNECF*RASDWT
Trigger: TGTCCAGTCTGAAGCCCTTCAAAAGCATTCATTATT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAATTTTCTGGTTATCTaGTGGTTGATGAAGCAAGGG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDNFLVI*WLMKQG
Trigger: CCCTTGCTTCATCAACCATCAGATAACCAGAAAATT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGTTCTGGTGCATTCATaGCTGATAATTACTGCTTTG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDVLVHS*LIITAL
Trigger: CAAAGCAGTAATTATCAGTCATGAATGCACCAGAAC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGAAAAACTCTGTTTCTaGATTTTGGCTTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDEKLCF*ILAFSA
Trigger: AGCGCTGAAAGCCAAAATGCAGAAACAGAGTTTTTC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCCAAGGCTTCTTAGTTaGTTAAGAGTTGCATTAAGG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDPRLLS*LRVALR
Trigger: CCTTAATGCAACTCTTAAGCAACTAAGAAGCCTTGG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR TCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCTTGAACAGAAGAATTaGATATGTATCGCAAACAGC +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDLEQKN*ICIANS
Trigger: GCTGTTTGCGATACATATTCAATTCTTCTGTTCAAG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATATAAATATTCACTCTTaGTATCTGCATTGTCGGGAG +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDINIHS*YLHCRE
Trigger: CTCCCGACAATGCAGATAGCAAGAGTGAATATTTAT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR GCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTTCATGCTATTCATCTaGTTTAGCGTTTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDFMLFI*FSVSEG
Trigger: ACCTTCTGAAACGCTAAAGCAGATGAATAGCATGAA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CCA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATATGGAGAAGGCTGAATaGGTCACAATTATTTTGGTT +
Preference number: 4 (lower is better)
Translates to: DLELDSICLLLKLVGITDMEKAE*VTIILV
Trigger: AACCAAAATAATTGTGACCCATTCAGCCTTCTCCAT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS CCA 90 bp GGAGCCGGCTCCAAGGAGCGCCACCGCCGACTCCGGCCCCGCCTCTaGGACGTTGGGGTCGCGGGAACTGAGGCGGCAAACACAAGCTCG +
Preference number: 5 (lower is better)
Translates to: GAGSKERHRRLRPRL*DVGVAGTEAANTSS
Trigger: CGAGCTTGTGTTTGCCGCCTCAGTTCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAGTCGGCGGTGGCGCTCCTTGGAGCCGGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS TCA 90 bp CCGCCGACTCCGGCCCCGCCTCTGGGACGTTGGGGTCGCGGGAACTaGGGCGGCAAACACAAGCTCGCGAAACTGAAGGCCGCGCCACGC +
Preference number: 5 (lower is better)
Translates to: PPTPAPPLGRWGRGN*GGKHKLAKLKAAPR
Trigger: GCGTGGCGCGGCCTTCAGTTTCGCGAGCTTGTGTTTGCCGCCTCAGTTCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAGTCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CCA 90 bp AGCGGGGGTGGTGCTAGAGAGCCGCGCACGGTCGCCGTTACGTATTaGTGTGCCGACCAATCAGCGCCCCGCACTGGTTCCGCGCTCGAC +
Preference number: 5 (lower is better)
Translates to: SGGGAREPRTVAVTY*CADQSAPRTGSALD
Trigger: GTCGAGCGCGGAACCAGTGCGGGGCGCTGATTGGTCGGCACACCAATACGTAACGGCGACCGTGCGCGGCTCTCTAGCACCACCCCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS GCA 90 bp ATGGTGAAACCCCGTCTCGCAACTTCCGCGGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGCCACCGCCGA +
Preference number: 5 (lower is better)
Translates to: MVKPRLATSAELRSV*RVGAGAGSKERHRR
Trigger: TCGGCGGTGGCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGAGACGGGGTTTCACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360380.7
CDS CCA 90 bp CAGCGCCCCGCACTGGTTCCGCGCTCGACCAATCCCAAGTCTTCTTaGAGAACTGCGGGCGCCACCGGCGCTCCAGGATCAAGGATCCGA +
Preference number: 5 (lower is better)
Translates to: QRPALVPRSTNPKSS*RTAGATGAPGSRIR
Trigger: TCGGATCCTTGATCCTGGAGCGCCGGTGGCGCCCGCAGTTCTCCAAGAAGACTTGGGATTGGTCGAGCGCGGAACCAGTGCGGGGCGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS GCA 90 bp TCCAAATCCTCAGTATCCGCAACTTCCGCGGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGCCACCGCCGA +
Preference number: 5 (lower is better)
Translates to: SKSSVSATSAELRSV*RVGAGAGSKERHRR
Trigger: TCGGCGGTGGCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGGATACTGAGGATTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337817.10
ENST00000371877.8
CDS GCA 90 bp ATCAAATTATTCTCCTGCGCAACTTCCGCGGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGCCACCGCCGA +
Preference number: 5 (lower is better)
Translates to: IKLFSCATSAELRSV*RVGAGAGSKERHRR
Trigger: TCGGCGGTGGCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGCAGGAGAATAATTTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447475.7
CDS CCA 90 bp GGTCGCCGTTACGTATTGGTGTGCCGACCAATCAGCGCCCCGCACTaGTTCCGCGCTCGACCAATCCCAAGTCTTCTTGGAGAACTGCGG +
Preference number: 5 (lower is better)
Translates to: GRRYVLVCRPISAPH*FRARPIPSLLGELR
Trigger: CCGCAGTTCTCCAAGAAGACTTGGGATTGGTCGAGCGCGGAACCAGTGCGGGGCGCTGATTGGTCGGCACACCAATACGTAACGGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CCA 90 bp TCAACGGTTAAGTTCCGGGGCGGGGTAGGCTTTCCGCAAGCGCAATaGAAAGCCCAGCTAGGTAGACGGAGGAGCGAGTGGCAGATGAAG +
Preference number: 5 (lower is better)
Translates to: STVKFRGGVGFPQAQ*KAQLGRRRSEWQMK
Trigger: CTTCATCTGCCACTCGCTCCTCCGTCTACCTAGCTGGGCTTTCCATTGCGCTTGCGGAAAGCCTACCCCGCCCCGGAACTTAACCGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEGAEVC*QGRSGS
Trigger: GCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS CCA 90 bp CCGCAAGCGCAATGGAAAGCCCAGCTAGGTAGACGGAGGAGCGAGTaGCAGATGAAGCCGGAAGTGCTCTATAAGATGATCATTGGTCGG +
Preference number: 5 (lower is better)
Translates to: PQAQWKAQLGRRRSE*QMKPEVLYKMIIGR
Trigger: CCGACCAATGATCATCTTATAGAGCACTTCCGGCTTCATCTGCCACTCGCTCCTCCGTCTACCTAGCTGGGCTTTCCATTGCGCTTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEGAEVC*QGRSGS
Trigger: GCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS GCA 90 bp AGTCCATATGTGAAGGCGGTCTTGCCACAGGCGATGGTTCAATATTaGTGTGGGGAGAACAACTGCCCATATCTCCCTGAGGTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: SPYVKAVLPQAMVQY*CGENNCPYLPEVSR
Trigger: CCTTGAGACCTCAGGGAGATATGGGCAGTTGTTCTCCCCACAGCAATATTGAACCATCGCCTGTGGCAAGACCGCCTTCACATATGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATATGTGAAGGCGGTCTaGCCACAGGCGATGGTTCAA +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEYVKAV*PQAMVQ
Trigger: TTGAACCATCGCCTGTGGCAAGACCGCCTTCACATA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTGCCAGCTGGCCACTaGGAAAGAACACAGGTACAT +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELPAGH*ERTQVH
Trigger: ATGTACCTGTGTTCTTTCCAAGTGGCCAGCTGGCAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATACTGGCACCCCCTGTaGGTCCAGTCTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEYWHPL*VQSVNT
Trigger: TGTGTTTACAGACTGGACCAACAGGGGGTGCCAGTA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAACTGGCGTATCTGCGTaGGTCCCCACAGATTCACAG +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKTGVSA*VPTDSQ
Trigger: CTGTGAATCTGTGGGGACCAACGCAGATACGCCAGT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCTGCCAGCTGGCCATaGGATACAGAAAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSASWP*DTESGW
Trigger: CCAGCCACTTTCTGTATCCAATGGCCAGCTGGCAGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAACAAAATCGTGTGGTaGGGACTGCGGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKNKIVW*GLRGKR
Trigger: TCTCTTGCCCCGCAGTCCCAACCACACGATTTTGTT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATACTGGCACCCCCTGTaGGTCCAGTCTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKYWHPL*VQSVNT
Trigger: TGTGTTTACAGACTGGACCAACAGGGGGTGCCAGTA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS GCA 90 bp ACCCAAGGCAGCTTGAGATACATAATGATATTCCAAAGCGCTCAGTaGAGCATGGACAGGAAACAAGAGAGCCAGTGGCCTGAACAGGGT +
Preference number: 5 (lower is better)
Translates to: TQGSLRYIMIFQSAQ*SMDRKQESQWPEQG
Trigger: ACCCTGTTCAGGCCACTGGCTCTCTTGTTTCCTGTCCATGCTGCACTGAGCGCTTTGGAATATCATTATGTATCTCAAGCTGCCTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAACTCTGTTTCTGCATTTaGGCTTTCAGCGCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELCFCI*AFSAQF
Trigger: GAACTGAGCGCTGAAAGCCAAAATGCAGAAACAGAG...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAACAAAATCGTGTGGTaGGGACTGCGGGGCAAGAGA +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDNKIVW*GLRGKR
Trigger: TCTCTTGCCCCGCAGTCCCAACCACACGATTTTGTT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGCGATGGTTCAATATaGCTGTGGGGAGAACAACTG +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGDGSI*LWGEQL
Trigger: CAGTTGTTCTCCCCACAGCAATATTGAACCATCGCC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTATGTGAAGGCGGTCTaGCCACAGGCGATGGTTCAA +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDYVKAV*PQAMVQ
Trigger: TTGAACCATCGCCTGTGGCAAGACCGCCTTCACATA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTGCCAGCTGGCCACTaGGAAAGAACACAGGTACAT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLPAGH*ERTQVH
Trigger: ATGTACCTGTGTTCTTTCCAAGTGGCCAGCTGGCAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360380.7
ENST00000371877.8
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTCTTGCTATCTGCATaGTCGGGAGGTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLLLSA*SGGSSS
Trigger: TGAAGAGGAACCTCCCGACAATGCAGATAGCAAGAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS GCA 90 bp GAAGACTGTGCTTCCACAGAAACCAACTCCATTTGTCTTCCAGCTTaGACTGTGTCTTCAACAGCAGTTGTCTTAGGGGAACAGGGCATC +
Preference number: 5 (lower is better)
Translates to: EDCASTETNSICLPA*TVSSTAVVLGEQGI
Trigger: GATGCCCTGTTCCCCTAAGACAACTGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCTGTGGAAGCACAGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 90 bp AAGCTAGCACCTGTGCTCACAGCAATGCTTACACCTTTTCTCATGTaGAAGCCAGGGGAAGACTGTGCTTCCACAGAAACCAACTCCATT +
Preference number: 5 (lower is better)
Translates to: KLAPVLTAMLTPFLM*KPGEDCASTETNSI
Trigger: AATGGAGTTGGTTTCTGTGGAAGCACAGTCTTCCCCTGGCTTGCACATGAGAAAAGGTGTAAGCATTGCTGTGAGCACAGGTGCTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGGTACCATCCTGCTaGAAGGAAACCTGGTATTCA +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEKVPSC*KETWYS
Trigger: TGAATACCAGGTTTCCTTCAAGCAGGATGGTACCTT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTCTGTTTCTGCATTTaGGCTTTCAGCGCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLCFCI*AFSAQF
Trigger: GAACTGAGCGCTGAAAGCCAAAATGCAGAAACAGAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAACACCTGCAAACGTTaGTGGAACAGTAAGATGGCA +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQENTCKR*WNSKMA
Trigger: TGCCATCTTACTGTTCCACAAACGTTTGCAGGTGTT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGGGCTGGACATCCACTaGGGTGAAATAATGAATGCT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKGLDIH*GEIMNA
Trigger: AGCATTCATTATTTCACCCAAGTGGATGTCCAGCCC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATATGTGAAGGCGGTCTaGCCACAGGCGATGGTTCAA +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAYVKAV*PQAMVQ
Trigger: TTGAACCATCGCCTGTGGCAAGACCGCCTTCACATA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTATCTGACTCAGTCTaGGGTGTGTGCATGCACACT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLSDSV*GVCMHT
Trigger: AGTGTGCATGCACACACCCAAGACTGAGTCAGATAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACATTTGTCTTCCAGCTaGCACTGTGTCTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKHLSSS*HCVFNS
Trigger: GCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGAAACCAACTCCATTaGTCTTCCAGCTTGCACTGT +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQERNQLH*SSSLHC
Trigger: ACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACTCAAATCCACACCATaGGGGCTTAAGCCGCTCATG +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALKSTP*GLKPLM
Trigger: CATGAGCGGCTTAAGCCCCAATGGTGTGGATTTGAG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTCTTGCTATCTGCATaGTCGGGAGGTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLLLSA*SGGSSS
Trigger: TGAAGAGGAACCTCCCGACAATGCAGATAGCAAGAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTCTTTCTCAGGATGTaGAGTGAACTCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEFFLRM*SELCFP
Trigger: GGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS TCA 90 bp ACAACTGCCCATATCTCCCTGAGGTCTCAAGGCTATAGGACTACTTaGAGAACAGAATGCATTACAGTACAGGGCTGGACATCCACTTGG +
Preference number: 5 (lower is better)
Translates to: TTAHISLRSQGYRTT*RTECITVQGWTSTW
Trigger: CCAAGTGGATGTCCAGCCCTGTACTGTAATGCATTCTGTTCTTCAAGTAGTCCTATAGCCTTGAGACCTCAGGGAGATATGGGCAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 90 bp TCATTCCATTATCTGACTCAGTCTTGGGTGTGTGCATGCACACTGTaGAAGGCTGTGGGTTACATAAGTCCATATGTGAAGGCGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SFHYLTQSWVCACTL*KAVGYISPYVKAVL
Trigger: CAAGACCGCCTTCACATATGGACTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 90 bp GGTATCATCTTGCTTCATTTGAGAGTCAGGCTCTTGATCCTCACCTaGTGCATTCCAAAACAAGCTAGCACCTGTGCTCACAGCAATGCT +
Preference number: 5 (lower is better)
Translates to: GIILLHLRVRLLILT*CIPKQASTCAHSNA
Trigger: AGCATTGCTGTGAGCACAGGTGCTAGCTTGTTTTGGAATGCAGCAGGTGAGGATCAAGAGCCTGACTCTCAAATGAAGCAAGATGATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 90 bp CCAGTTGGCGTTGGGTTCCAAAGTGCACATTTTGATGGAGGAAAGTaGAAAGGTACCATCCTGCTTGAAGGAAACCTGGTATTCATCTGG +
Preference number: 5 (lower is better)
Translates to: PVGVGFQSAHFDGGK*KGTILLEGNLVFIW
Trigger: CCAGATGAATACCAGGTTTCCTTCAAGCAGGATGGTACCTTTCCACTTTCCTCCATCAAAATGTGCACTTTGGAACCCAACGCCAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000436811.2
ENST00000447475.7
ENST00000682977.1
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAATCTCCAGTTGGCGTaGGGTTCCAAAGTGCACATT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDNLQLA*GSKVHI
Trigger: AATGTGCACTTTGGAACCCAACGCCAACTGGAGATT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCGAAAGTCAGGTATCTaGCCATCACAAGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDRKSGI*PSQGKH
Trigger: ATGCTTCCCTTGTGATGGCAAGATACCTGACTTTCG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGGTGGCTGTCTTACTTaGCAGTGTCTCAAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDGGCLT*QCLKRA
Trigger: AGCTCTTTTGAGACACTGCAAAGTAAGACAGCCACC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAGTATCTGAAGTTCCATaGGTCTTCCTGAATTATGGG +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEVSEVP*VFLNYG
Trigger: CCCATAATTCAGGAAGACCAATGGAACTTCAGATAC...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATGGATCCAACTGTGTTaGCTCCTTGCCAAGAATTTA +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEWIQLC*LLAKNL
Trigger: TAAATTCTTGGCAAGGAGCAAACACAGTTGGATCCA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTATCTGACTCAGTCTaGGGTGTGTGCATGCACACT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLSDSV*GVCMHT
Trigger: AGTGTGCATGCACACACCCAAGACTGAGTCAGATAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCATCTTGCTTCATTaGAGAGTCAGGCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQEIILLH*RVRLLI
Trigger: GATCAAGAGCCTGACTCTCAAATGAAGCAAGATGAT...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACTGATAATTACTGCTTaGGTAGACGGCTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLIITA*VDGCSV
Trigger: AACTGAGCAGCCGTCTACCAAAGCAGTAATTATCAG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTCTTTCTCAGGATGTaGAGTGAACTCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKFFLRM*SELCFP
Trigger: GGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS GCA 90 bp GGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTTGGGTGTGTaGATGCACACTGTGCAAGGCTGTGGGTTACATAAGTCCATATGT +
Preference number: 5 (lower is better)
Translates to: GDSPIIPLSDSVLGV*MHTVQGCGLHKSIC
Trigger: ACATATGGACTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 90 bp ATGCATCTGGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTTaGGTGTGTGCATGCACACTGTGCAAGGCTGTGGGTTACATAAGT +
Preference number: 5 (lower is better)
Translates to: MHLEIVPSFHYLTQS*VCACTLCKAVGYIS
Trigger: ACTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCCAGATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAAATCTCCAGTTGGCGTaGGGTTCCAAAGTGCACATT +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRANLQLA*GSKVHI
Trigger: AATGTGCACTTTGGAACCCAACGCCAACTGGAGATT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACGAAAGTCAGGTATCTaGCCATCACAAGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPERKSGI*PSQGKH
Trigger: ATGCTTCCCTTGTGATGGCAAGATACCTGACTTTCG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACTCTGTTTCTGCATTTaGGCTTTCAGCGCTCAGTTC +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELCFCI*AFSAQF
Trigger: GAACTGAGCGCTGAAAGCCAAAATGCAGAAACAGAG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGTCGTGATCATGTATaGGCATCTTCCCAGAAGATA +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSRDHV*ASSQKI
Trigger: TATCTTCTGGGAAGATGCCAATACATGATCACGACT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATCATAAAGCTGGGGTaGCAATGGCTTCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDIIKLG*QWLQVF
Trigger: GAACACTTGAAGCCATTGCAACCCCAGCTTTATGAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACCTGGTTTAACTGATTaGGTATTCCTCTCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKPGLTD*VFLSRK
Trigger: CTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAGGTGGCTGTCTTACTTaGCAGTGTCTCAAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEGGCLT*QCLKRA
Trigger: AGCTCTTTTGAGACACTGCAAAGTAAGACAGCCACC...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAGTATCTGAAGTTCCATaGGTCTTCCTGAATTATGGG +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKVSEVP*VFLNYG
Trigger: CCCATAATTCAGGAAGACCAATGGAACTTCAGATAC...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAACACCTGCAAACGTTaGTGGAACAGTAAGATGGCA +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDNTCKR*WNSKMA
Trigger: TGCCATCTTACTGTTCCACAAACGTTTGCAGGTGTT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGGGCTGGACATCCACTaGGGTGAAATAATGAATGCT +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAGLDIH*GEIMNA
Trigger: AGCATTCATTATTTCACCCAAGTGGATGTCCAGCCC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATTATCTGACTCAGTCTaGGGTGTGTGCATGCACACT +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRALSDSV*GVCMHT
Trigger: AGTGTGCATGCACACACCCAAGACTGAGTCAGATAA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACATTTGTCTTCCAGCTaGCACTGTGTCTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAHLSSS*HCVFNS
Trigger: GCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAACTAGAGAAGAGCTGTaGGATACAGAAAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRATREEL*DTESGW
Trigger: CCAGCCACTTTCTGTATCCAACAGCTCTTCTCTAGT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371877.8
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGGCTGCTCAGTTTCCTaGGAGGAACTATTTAATAGG +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDGCSVS*EELFNR
Trigger: CCTATTAAATAGTTCCTCCAAGGAAACTGAGCAGCC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCTGATAATTACTGCTTaGGTAGACGGCTGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLIITA*VDGCSV
Trigger: AACTGAGCAGCCGTCTACCAAAGCAGTAATTATCAG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATGGGTCACAATTATTTaGGTTCGATCGAGTGACAGA +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKWVTII*VRSSDR
Trigger: TCTGTCACTCGATCGAACCAAAATAATTGTGACCCA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTCTTTCTCAGGATGTaGAGTGAACTCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDFFLRM*SELCFP
Trigger: GGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACACAACTAGAGAAGAGTaGGATACAGAAAGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDTTREE*DTESGW
Trigger: CCAGCCACTTTCTGTATCCAACTCTTCTCTAGTTGT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360380.7
CDS TCA 90 bp CCCAATGCAAGTCAAATTCCACACTGTCCAAACTCTCCCTGGAAGTaGTATGAACTCTTAGGGAAAGCAGCTTACCACAGTCCAAGGAAT +
Preference number: 5 (lower is better)
Translates to: PNASQIPHCPNSPWK*YELLGKAAYHSPRN
Trigger: ATTCCTTGGACTGTGGTAAGCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTTTGGACAGTGTGGAATTTGACTTGCATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS TCA 90 bp TGGCCTGAACAGGGTCAAAAGTTGCAGCAGGAACTTGCACAAATCTaGCAAAGACCAGATGCAAATGAAAACACCTCAGCAGATTGTAGC +
Preference number: 5 (lower is better)
Translates to: WPEQGQKLQQELAQI*QRPDANENTSADCS
Trigger: GCTACAATCTGCTGAGGTGTTTTCATTTGCATCTGGTCTTTGTCAGATTTGTGCAAGTTCCTGCTGCAACTTTTGACCCTGTTCAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418131.1
CDS GCA 90 bp ATAGTCCCATCATTCCATTATCTGACTCAGTCTTGGGTGTGTGCATaGACACTGTGCAAGGCTGTGGGTTACATAAGTCCATATGTGAAG +
Preference number: 5 (lower is better)
Translates to: IVPSFHYLTQSWVCA*TLCKAVGYISPYVK
Trigger: CTTCACATATGGACTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 90 bp ATGCATCTGGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTTaGGTGTGTGCATGCACACTGTGCAAGGTTTGCAGTGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: MHLEIVPSFHYLTQS*VCACTLCKVCSVSK
Trigger: TTTTGAGACACTGCAAACCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCCAGATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAACGGATTGGATTTTaGTCAGGAGGTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKQRIGF*SGGSTF
Trigger: AAATGTTGAACCTCCTGACAAAAATCCAATCCGTTG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAGGATACTCTTCGTTTaGTACATTTCCAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKRILFV*YISSRN
Trigger: GTTTCTGCTGGAAATGTACAAAACGAAGAGTATCCT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTGGATCCAACTGTGTTaGCTCCTTGCCAAGAATTTA +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDWIQLC*LLAKNL
Trigger: TAAATTCTTGGCAAGGAGCAAACACAGTTGGATCCA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTCAGACTGGACATCTaGAATGGATCCAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDFRLDI*NGSNCV
Trigger: AACACAGTTGGATCCATTCAAGATGTCCAGTCTGAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAAAGAAACCAACTCCATTaGTCTTCCAGCTTGCACTGT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPERNQLH*SSSLHC
Trigger: ACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCT...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACATCATCTTGCTTCATTaGAGAGTCAGGCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDIILLH*RVRLLI
Trigger: GATCAAGAGCCTGACTCTCAAATGAAGCAAGATGAT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTACATGCTCAATTTTaGGTTCCTCTGATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELHAQF*VPLMFQ
Trigger: CTGAAACATCAGAGGAACCAAAAATTGAGCATGTAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAATTGATGAAGCAAGGGTaGCATTACATGCTCAATTTT +
Preference number: 5 (lower is better)
Translates to: HQPAISQKSLFPIGCYQELMKQG*HYMLNF
Trigger: AAAATTGAGCATGTAATGCAACCCTTGCTTCATCAA...TTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTGTATGGTAAACGTTTaGGGTTCTGGTGCATTCATG +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDCMVNV*GSGAFM
Trigger: CATGAATGCACCAGAACCCAAAACGTTTACCATACA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTCAACTGCTGTTTaGCTTTTGTCTGCAAAACTT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKQSTAV*LLSAKL
Trigger: AAGTTTTGCAGACAAAAGCAAAACAGCAGTTGACTG...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS TCA 90 bp CATCTGGGGCCGTGCAAAAGGATATATAGGCTCCATGATGTCTGGTaGATGATTTCTTTAATTCCAAATCCTCAGTATCCGCAACTTCCG +
Preference number: 5 (lower is better)
Translates to: HLGPCKRIYRLHDVW*MISLIPNPQYPQLP
Trigger: CGGAAGTTGCGGATACTGAGGATTTGGAATTAAAGAAATCATTCACCAGACATCATGGAGCCTATATATCCTTTTGCACGGCCCCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337817.10
ENST00000371877.8
CDS TCA 90 bp GATGGTTCAATATTGCTGTGGGGAGAACAACTGCCCATATCTCCCTaGGGTCTCAAGGCTATAGGACTACTTGAAGAACAGAATGCATTA +
Preference number: 5 (lower is better)
Translates to: DGSILLWGEQLPISP*GLKAIGLLEEQNAL
Trigger: TAATGCATTCTGTTCTTCAAGTAGTCCTATAGCCTTGAGACCTCAGGGAGATATGGGCAGTTGTTCTCCCCACAGCAATATTGAACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 90 bp GCTGAATCTGTGCCTGAAGTAGTCTTAGCTGTCTGTCTTGTTCTGTaGGGAACCGATATGCATCTGGAGATAGTCCCATCATTCCATTAT +
Preference number: 5 (lower is better)
Translates to: AESVPEVVLAVCLVL*GTDMHLEIVPSFHY
Trigger: ATAATGGAATGATGGGACTATCTCCAGATGCATATCGGTTCCTCACAGAACAAGACAGACAGCTAAGACTACTTCAGGCACAGATTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 90 bp TTGATGAAGCAAGGGTTGCATTACATGCTCAATTTTTGGTTCCTCTaGTGTTTCAGAATTGTTACTGGCACCCCCTGTTGGTCCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LMKQGLHYMLNFWFL*CFRIVTGTPCWSSL
Trigger: CAGACTGGACCAACAGGGGGTGCCAGTAACAATTCTGAAACATCAGAGGAACCAAAAATTGAGCATGTAATGCAACCCTTGCTTCATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 90 bp TGCAAGTCAAATTCCACACTGTCCAAACTCTCCCTGGAAGTGATATaGACTCTTAGGGAAAGCAGCTTACCACAGTCCAAGGAATCTTTG +
Preference number: 5 (lower is better)
Translates to: CKSNSTLSKLSLEVI*TLRESSLPQSKESL
Trigger: CAAAGATTCCTTGGACTGTGGTAAGCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTTTGGACAGTGTGGAATTTGACTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS GCA 90 bp TGGTATGGGGGTTCCCTTTCTTATAGGCAGGTGGCTGTCTTACTTTaGAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTGATTTG +
Preference number: 5 (lower is better)
Translates to: WYGGSLSYRQVAVLL*SVSKELVYPGLTDL
Trigger: CAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGACACTGCAAAGTAAGACAGCCACCTGCCTATAAGAAAGGGAACCCCCATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACAGTCCAAGGAATCTTaGCTACATATATGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEQSKES*LHIWHC
Trigger: ACAGTGCCATATATGTAGCAAAGATTCCTTGGACTG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACAGTCCAAGGAATCTTaGCTACATATATGGCACTGT +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAQSKES*LHIWHC
Trigger: ACAGTGCCATATATGTAGCAAAGATTCCTTGGACTG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATCAGTTCACAACGGATaGGATTTTTGTCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRASVHNG*DFCQEV
Trigger: AACCTCCTGACAAAAATCCAATCCGTTGTGAACTGA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCAGTTCACAACGGATaGGATTTTTGTCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESVHNG*DFCQEV
Trigger: AACCTCCTGACAAAAATCCAATCCGTTGTGAACTGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACCTGGTTTAACTGATTaGGTATTCCTCTCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEPGLTD*VFLSRK
Trigger: CTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCACCTGGTTTAACTGATTaGGTATTCCTCTCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAPGLTD*VFLSRK
Trigger: CTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGG...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACAGGATACTCTTCGTTTaGTACATTTCCAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDRILFV*YISSRN
Trigger: GTTTCTGCTGGAAATGTACAAAACGAAGAGTATCCT...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGTATCTGAAGTTCCATaGGTCTTCCTGAATTATGGG +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAVSEVP*VFLNYG
Trigger: CCCATAATTCAGGAAGACCAATGGAACTTCAGATAC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATGGATCCAACTGTGTTaGCTCCTTGCCAAGAATTTA +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEWIQLC*LLAKNL
Trigger: TAAATTCTTGGCAAGGAGCAAACACAGTTGGATCCA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTCAGACTGGACATCTaGAATGGATCCAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEFRLDI*NGSNCV
Trigger: AACACAGTTGGATCCATTCAAGATGTCCAGTCTGAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAATCATCTTGCTTCATTaGAGAGTCAGGCTCTTGATC +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAIILLH*RVRLLI
Trigger: GATCAAGAGCCTGACTCTCAAATGAAGCAAGATGAT...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAAAATTTTGGTATCATCTaGCTTCATTTGAGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKNFGII*LHLRVR
Trigger: CCTGACTCTCAAATGAAGCAAGATGATACCAAAATT...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATCCTCACTGGAAATTTaGGTATCATCTTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKSSLEI*VSSCFI
Trigger: AATGAAGCAAGATGATACCAAAATTTCCAGTGAGGA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp ACCAGCCAGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAATTGATGAAGCAAGGGTaGCATTACATGCTCAATTTT +
Preference number: 5 (lower is better)
Translates to: TSQPSHRSHSSQLAATKKLMKQG*HYMLNF
Trigger: AAAATTGAGCATGTAATGCAACCCTTGCTTCATCAA...TTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCTGGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATGTATGGTAAACGTTTaGGGTTCTGGTGCATTCATG +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPECMVNV*GSGAFM
Trigger: CATGAATGCACCAGAACCCAAAACGTTTACCATACA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCATGGGTCACAATTATTTaGGTTCGATCGAGTGACAGA +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAWVTII*VRSSDR
Trigger: TCTGTCACTCGATCGAACCAAAATAATTGTGACCCA...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACCAGTCAACTGCTGTTTaGCTTTTGTCTGCAAAACTT +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDQSTAV*LLSAKL
Trigger: AAGTTTTGCAGACAAAAGCAAAACAGCAGTTGACTG...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS TCA 90 bp CAAGGTTTGCAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTaGTTTGGTATTCCTCTCAAGGAAGGCTCTCCAGCTTCAACTTCT +
Preference number: 5 (lower is better)
Translates to: QGLQCLKRAGLSWFN*FGIPLKEGSPASTS
Trigger: AGAAGTTGAAGCTGGAGAGCCTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGACACTGCAAACCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS CCA 90 bp AGTACTACCCTCCCATTTAGTCAGGAATACTCATTGTATCACAGATaGCATGCCCAGCAAAACAGAAAATTTCTGAGTGCTGGTACCAAG +
Preference number: 5 (lower is better)
Translates to: STTLPFSQEYSLYHR*HAQQNRKFLSAGTK
Trigger: CTTGGTACCAGCACTCAGAAATTTTCTGTTTTGCTGGGCATGCCATCTGTGATACAATGAGTATTCCTGACTAAATGGGAGGGTAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAACAACGGATTGGATTTTaGTCAGGAGGTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPEQRIGF*SGGSTF
Trigger: AAATGTTGAACCTCCTGACAAAAATCCAATCCGTTG...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTTACATGCTCAATTTTaGGTTCCTCTGATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDLHAQF*VPLMFQ
Trigger: CTGAAACATCAGAGGAACCAAAAATTGAGCATGTAA...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATACTGGCGTATCTGCGTaGGTCCCCACAGATTCACAG +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDTGVSA*VPTDSQ
Trigger: CTGTGAATCTGTGGGGACCAACGCAGATACGCCAGT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp AGCCATCTCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACGTTGAACAGCTCTATTaGAACAATGAGAACTTAGTC +
Preference number: 5 (lower is better)
Translates to: SHLTEVTLPNWLLPRNSDVEQLY*NNENLV
Trigger: GACTAAGTTCTCATTGTTCAAATAGAGCTGTTCAAC...GTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGAGATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS TCA 90 bp CTTACTTTGCAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTaGTTTGGTATTCCTCTCAAGGAAGGCTCTCCAGCTTCAACTTCT +
Preference number: 5 (lower is better)
Translates to: LTLQCLKRAGLSWFN*FGIPLKEGSPASTS
Trigger: AGAAGTTGAAGCTGGAGAGCCTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGACACTGCAAAGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 90 bp CATCTGGGGCCGTGCAAAAGGATATATAGGCTCCATGATGTCTGGTaGATGATTTCTTTAATTCCAAATCCTCAGTATCCAGACTTATGG +
Preference number: 5 (lower is better)
Translates to: HLGPCKRIYRLHDVW*MISLIPNPQYPDLW
Trigger: CCATAAGTCTGGATACTGAGGATTTGGAATTAAAGAAATCATTCACCAGACATCATGGAGCCTATATATCCTTTTGCACGGCCCCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360380.7
ENST00000396221.6
ENST00000447475.7
ENST00000682977.1
CDS GCA 90 bp ACAGGTGTGCATTTAAAGTTATTTGCTAGAGTTACTGCTGCCCAATaGAAGTCAAATTCCACACTGTCCAAACTCTCCCTGGAAGTGATA +
Preference number: 5 (lower is better)
Translates to: TGVHLKLFARVTAAQ*KSNSTLSKLSLEVI
Trigger: TATCACTTCCAGGGAGAGTTTGGACAGTGTGGAATTTGACTTGCATTGGGCAGCAGTAACTCTAGCAAATAACTTTAAATGCACACCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATCCTCACTGGAAATTTaGGTATCATCTTGCTTCATT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPESSLEI*VSSCFI
Trigger: AATGAAGCAAGATGATACCAAAATTTCCAGTGAGGA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTACTGGCACCCCCTGTaGGTCCAGTCTGTAAACACA +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDYWHPL*VQSVNT
Trigger: TGTGTTTACAGACTGGACCAACAGGGGGTGCCAGTA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTACATGCTCAATTTTaGGTTCCTCTGATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELHAQF*VPLMFQ
Trigger: CTGAAACATCAGAGGAACCAAAAATTGAGCATGTAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp TCACAGAAGTCACTCTTCCCAATTGGCTGCTACCAAGAAACAGTGACTCCAGAATTGATGAAGCAAGGGTaGCATTACATGCTCAATTTT +
Preference number: 5 (lower is better)
Translates to: SQKSLFPIGCYQETVTPELMKQG*HYMLNF
Trigger: AAAATTGAGCATGTAATGCAACCCTTGCTTCATCAA...TTCTGGAGTCACTGTTTCTTGGTAGCAGCCAATTGGGAAGAGTGACTTCTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCTCAAATCCACACCATaGGGGCTTAAGCCGCTCATG +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDLKSTP*GLKPLM
Trigger: CATGAGCGGCTTAAGCCCCAATGGTGTGGATTTGAG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp CCTGTTTTCCCTAAGTATCTTCAGGAGACACCCTGTCCCTGTATTAAAAGGGCAGTTGAACAGCTCTATTaGAACAATGAGAACTTAGTC +
Preference number: 5 (lower is better)
Translates to: PVFPKYLQETPCPCIKRAVEQLY*NNENLV
Trigger: GACTAAGTTCTCATTGTTCAAATAGAGCTGTTCAAC...TGCCCTTTTAATACAGGGACAGGGTGTCTCCTGAAGATACTTAGGGAAAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS TCA 90 bp GGAATTGGTCTTGGAGAAAAATCTTCATCTTCAACACCAGAGTCGTaGTCATGTATTGGCATCTTCCCAGAAGATAACTTTTGGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GIGLGEKSSSSTPES*SCIGIFPEDNFWED
Trigger: GTCTTCCCAAAAGTTATCTTCTGGGAAGATGCCAATACATGATCACGACTCTGGTGTTGAAGATGAAGATTTTTCTCCAAGACCAATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
CDS CCA 90 bp TTGGATCTTAGAAATCTTCTGACTCACTGGATGAGGACTAGGAATTaGTCTTGGAGAAAAATCTTCATCTTCAACACCAGAGTCGTGATC +
Preference number: 5 (lower is better)
Translates to: LDLRNLLTHWMRTRN*SWRKIFIFNTRVVI
Trigger: GATCACGACTCTGGTGTTGAAGATGAAGATTTTTCTCCAAGACCAATTCCTAGTCCTCATCCAGTGAGTCAGAAGATTTCTAAGATCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
CDS CCA 90 bp GGTGAAATTAAACTAAGCCCCACTGTGCTTCTGTCTGTATTAATATaGAGAAGGCTGAATGGGTCACAATTATTTTGGTTCGATCGAGTG +
Preference number: 5 (lower is better)
Translates to: GEIKLSPTVLLSVLI*RRLNGSQLFWFDRV
Trigger: CACTCGATCGAACCAAAATAATTGTGACCCATTCAGCCTTCTCCATATTAATACAGACAGAAGCACAGTGGGGCTTAGTTTAATTTCACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGGCGATGGTTCAATATaGCTGTGGGGAGAACAACTG +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDGDGSI*LWGEQL
Trigger: CAGTTGTTCTCCCCACAGCAATATTGAACCATCGCC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCTCTTGCTATCTGCATaGTCGGGAGGTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDLLLSA*SGGSSS
Trigger: TGAAGAGGAACCTCCCGACAATGCAGATAGCAAGAG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS CCA 90 bp CTTAGAAATCTTCTGACTCACTGGATGAGGACTAGGAATTGGTCTTaGAGAAAAATCTTCATCTTCAACACCAGAGTCGTGATCATGTAT +
Preference number: 5 (lower is better)
Translates to: LRNLLTHWMRTRNWS*RKIFIFNTRVVIMY
Trigger: ATACATGATCACGACTCTGGTGTTGAAGATGAAGATTTTTCTCCAAGACCAATTCCTAGTCCTCATCCAGTGAGTCAGAAGATTTCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
CDS CCA 90 bp TTCAACTTCTGGACTGTGTTTCTCATCATAAAGCTGGGGTTGCAATaGCTTCAAGTGTTCCAAGTGGTTAATCAAAGGAGGATTTTCATT +
Preference number: 5 (lower is better)
Translates to: FNFWTVFLIIKLGLQ*LQVFQVVNQRRIFI
Trigger: AATGAAAATCCTCCTTTGATTAACCACTTGGAACACTTGAAGCCATTGCAACCCCAGCTTTATGATGAGAAACACAGTCCAGAAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 90 bp TTGGAGCTTTTCAAATATATCATGAGATGGCCCATTATGAGAAGATaGTTTAATACTGTTCCTGGTATGGGGGTTCCCTTTCTTATAGGC +
Preference number: 5 (lower is better)
Translates to: LELFKYIMRWPIMRR*FNTVPGMGVPFLIG
Trigger: GCCTATAAGAAAGGGAACCCCCATACCAGGAACAGTATTAAACCATCTTCTCATAATGGGCCATCTCATGATATATTTGAAAAGCTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAATCTCCAGTTGGCGTaGGGTTCCAAAGTGCACATT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDNLQLA*GSKVHI
Trigger: AATGTGCACTTTGGAACCCAACGCCAACTGGAGATT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCGAAAGTCAGGTATCTaGCCATCACAAGGGAAGCAT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDRKSGI*PSQGKH
Trigger: ATGCTTCCCTTGTGATGGCAAGATACCTGACTTTCG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGGTGGCTGTCTTACTTaGCAGTGTCTCAAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDGGCLT*QCLKRA
Trigger: AGCTCTTTTGAGACACTGCAAAGTAAGACAGCCACC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCATTTGTCTTCCAGCTaGCACTGTGTCTTCAACAGC +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDHLSSS*HCVFNS
Trigger: GCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS CCA 90 bp ATTTCCAGCAGAAACTGTTTGGAGCTTTTCAAATATATCATGAGATaGCCCATTATGAGAAGATGGTTTAATACTGTTCCTGGTATGGGG +
Preference number: 5 (lower is better)
Translates to: ISSRNCLELFKYIMR*PIMRRWFNTVPGMG
Trigger: CCCCATACCAGGAACAGTATTAAACCATCTTCTCATAATGGGCCATCTCATGATATATTTGAAAAGCTCCAAACAGTTTCTGCTGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAAGGTACCATCCTGCTaGAAGGAAACCTGGTATTCA +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDKVPSC*KETWYS
Trigger: TGAATACCAGGTTTCCTTCAAGCAGGATGGTACCTT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATATCATAAAGCTGGGGTaGCAATGGCTTCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDIIKLG*QWLQVF
Trigger: GAACACTTGAAGCCATTGCAACCCCAGCTTTATGAT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATGGCTGCTCAGTTTCCTaGGAGGAACTATTTAATAGG +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDGCSVS*EELFNR
Trigger: CCTATTAAATAGTTCCTCCAAGGAAACTGAGCAGCC...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS TCA 90 bp TCTTTCTGTACAAGGTATTACAATGAAGCAATCAGAATGTCTGCATaGTTATGTTTAAGCAGAAATGGGTCTTCAGTCCCACAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SFCTRYYNEAIRMSA*LCLSRNGSSVPQSS
Trigger: AGAGCTTTGTGGGACTGAAGACCCATTTCTGCTTAAACATAATCATGCAGACATTCTGATTGCTTCATTGTAATACCTTGTACAGAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCCAAAGTGCACATTTaGATGGAGGAAAGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDSKVHI*MEESGK
Trigger: CTTTCCACTTTCCTCCATCAAAATGTGCACTTTGGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTCAGTTCACAACGGATaGGATTTTTGTCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDSVHNG*DFCQEV
Trigger: AACCTCCTGACAAAAATCCAATCCGTTGTGAACTGA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAGTCGTGATCATGTATaGGCATCTTCCCAGAAGATA +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDSRDHV*ASSQKI
Trigger: TATCTTCTGGGAAGATGCCAATACATGATCACGACT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTTCAGACTGGACATCTaGAATGGATCCAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDFRLDI*NGSNCV
Trigger: AACACAGTTGGATCCATTCAAGATGTCCAGTCTGAA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATTGTATGGTAAACGTTTaGGGTTCTGGTGCATTCATG +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDCMVNV*GSGAFM
Trigger: CATGAATGCACCAGAACCCAAAACGTTTACCATACA...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS GCA 90 bp CGTTTTACATCTAAGAAGGTGCCTACTGAATTCATGCTATTCATCTaGTTTAGCGTTTCAGAAGGTTGCAAACTTTCAGGAAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: RFTSKKVPTEFMLFI*FSVSEGCKLSGKIV
Trigger: TACAATTTTTCCTGAAAGTTTGCAACCTTCTGAAACGCTAAAGCAGATGAATAGCATGAATTCAGTAGGCACCTTCTTAGATGTAAAACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCAACGGATTGGATTTTaGTCAGGAGGTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDQRIGF*SGGSTF
Trigger: AAATGTTGAACCTCCTGACAAAAATCCAATCCGTTG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATAGGATACTCTTCGTTTaGTACATTTCCAGCAGAAAC +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDRILFV*YISSRN
Trigger: GTTTCTGCTGGAAATGTACAAAACGAAGAGTATCCT...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS-3UTR CAA 90 bp GACTTAGAGCTGGATAGTATCTGTCTACTACTTAAACTTGTAGGAATAACTGATCAGTCAACTGCTGTTTaGCTTTTGTCTGCAAAACTT +
Preference number: 5 (lower is better)
Translates to: DLELDSICLLLKLVGITDQSTAV*LLSAKL
Trigger: AAGTTTTGCAGACAAAAGCAAAACAGCAGTTGACTG...ATCAGTTATTCCTACAAGTTTAAGTAGTAGACAGATACTATCCAGCTCTAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
CDS GCA 90 bp TGTCTGCAAAACTTCATTTGTAATATTTCTCAATACTGGCGTATCTaGGTTGGTCCCCACAGATTCACAGTTAGAACAATTAATTATTTC +
Preference number: 5 (lower is better)
Translates to: CLQNFICNISQYWRI*VGPHRFTVRTINYF
Trigger: GAAATAATTAATTGTTCTAACTGTGAATCTGTGGGGACCAACGCAGATACGCCAGTATTGAGAAATATTACAAATGAAGTTTTGCAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp TCCAAGGAGCGCCACCGCCGACTCCGGCCCCGCCTCTaGGACGTTGGGGTCGCGGGAACTGAGGCGGCAAAC +
Preference number: 6 (lower is better)
Translates to: SKERHRRLRPRL*DVGVAGTEAAN
Trigger: GTTTGCCGCCTCAGTTCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAGTCGGCGGTGGCGCTCCTTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CAA 72 bp AGCGCCACCGCCGACTCCGGCCCCGCCTCTGGGACGTaGGGGTCGCGGGAACTGAGGCGGCAAACACAAGCT +
Preference number: 6 (lower is better)
Translates to: SATADSGPASGT*GSRELRRQTQA
Trigger: AGCTTGTGTTTGCCGCCTCAGTTCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAGTCGGCGGTGGCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CAA 90 bp GCTCCAAGGAGCGCCACCGCCGACTCCGGCCCCGCCTCTGGGACGTaGGGGTCGCGGGAACTGAGGCGGCAAACACAAGCTCGCGAAACT +
Preference number: 6 (lower is better)
Translates to: APRSATADSGPASGT*GSRELRRQTQARET
Trigger: AGTTTCGCGAGCTTGTGTTTGCCGCCTCAGTTCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGGAGTCGGCGGTGGCGCTCCTTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS TCA 72 bp CCGGCCCCGCCTCTGGGACGTTGGGGTCGCGGGAACTaGGGCGGCAAACACAAGCTCGCGAAACTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: PAPPLGRWGRGN*GGKHKLAKLKA
Trigger: GGCCTTCAGTTTCGCGAGCTTGTGTTTGCCGCCTCAGTTCCCGCGACCCCAACGTCCCAGAGGCGGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS GCA 72 bp CCCCGTCTCGCAACTTCCGCGGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: PRLATSAELRSV*RVGAGAGSKER
Trigger: GCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGAGACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360380.7
CDS CCA 72 bp GCTCGCGAAACTGAAGGCCGCGCCACGCCTGCTGACTaGTCAGAAACCTCGCCAGTCAGGGAGCGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: ARETEGRATPAD*SETSPVRERGW
Trigger: CCACCCCCGCTCCCTGACTGGCGAGGTTTCTGACCAGTCAGCAGGCGTGGCGCGGCCTTCAGTTTCGCGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CAA 90 bp CATGGTGAAACCCCGTCTCGCAACTTCCGCGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: HGETPSRNFRGAEVC*QGRSGSRLQGAPPP
Trigger: CGGCGGTGGCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGAGACGGGGTTTCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360380.7
CDS CAA 72 bp ACCCCGTCTCGCAACTTCCGCGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: TPSRNFRGAEVC*QGRSGSRLQGA
Trigger: CGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGAGACGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360380.7
CDS CAA 90 bp TCAGCGCCCCGCACTGGTTCCGCGCTCGACCAATCCCAAGTCTTCTaGGAGAACTGCGGGCGCCACCGGCGCTCCAGGATCAAGGATCCG +
Preference number: 6 (lower is better)
Translates to: SAPRTGSALDQSQVF*ENCGRHRRSRIKDP
Trigger: CGGATCCTTGATCCTGGAGCGCCGGTGGCGCCCGCAGTTCTCCAAGAAGACTTGGGATTGGTCGAGCGCGGAACCAGTGCGGGGCGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS GCA 72 bp TTCTCCTGCGCAACTTCCGCGGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: FSCATSAELRSV*RVGAGAGSKER
Trigger: GCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGCAGGAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447475.7
CDS CCA 72 bp GGTGCTAGAGAGCCGCGCACGGTCGCCGTTACGTATTaGTGTGCCGACCAATCAGCGCCCCGCACTGGTTCC +
Preference number: 6 (lower is better)
Translates to: GAREPRTVAVTY*CADQSAPRTGS
Trigger: GGAACCAGTGCGGGGCGCTGATTGGTCGGCACACCAATACGTAACGGCGACCGTGCGCGGCTCTCTAGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CAA 72 bp CGCACTGGTTCCGCGCTCGACCAATCCCAAGTCTTCTaGGAGAACTGCGGGCGCCACCGGCGCTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: RTGSALDQSQVF*ENCGRHRRSRI
Trigger: GATCCTGGAGCGCCGGTGGCGCCCGCAGTTCTCCAAGAAGACTTGGGATTGGTCGAGCGCGGAACCAGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS GCA 72 bp TCCGCGCTCGACCAATCCCAAGTCTTCTTGGAGAACTaGGGGCGCCACCGGCGCTCCAGGATCAAGGATCCG +
Preference number: 6 (lower is better)
Translates to: SALDQSQVFLEN*GRHRRSRIKDP
Trigger: CGGATCCTTGATCCTGGAGCGCCGGTGGCGCCCGCAGTTCTCCAAGAAGACTTGGGATTGGTCGAGCGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS GCA 72 bp TCAGTATCCGCAACTTCCGCGGAGCTGAGGTCTGTTTaGAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: SVSATSAELRSV*RVGAGAGSKER
Trigger: GCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGGATACTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337817.10
ENST00000371877.8
CDS CCA 72 bp GCACTGGTTCCGCGCTCGACCAATCCCAAGTCTTCTTaGAGAACTGCGGGCGCCACCGGCGCTCCAGGATCA +
Preference number: 6 (lower is better)
Translates to: ALVPRSTNPKSS*RTAGATGAPGS
Trigger: TGATCCTGGAGCGCCGGTGGCGCCCGCAGTTCTCCAAGAAGACTTGGGATTGGTCGAGCGCGGAACCAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CAA 72 bp CTCAGTATCCGCAACTTCCGCGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: LSIRNFRGAEVC*QGRSGSRLQGA
Trigger: CGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGGATACTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337817.10
ENST00000371877.8
CDS CAA 72 bp ATTCTCCTGCGCAACTTCCGCGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCG +
Preference number: 6 (lower is better)
Translates to: ILLRNFRGAEVC*QGRSGSRLQGA
Trigger: CGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGCAGGAGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447475.7
CDS CAA 90 bp TTCCAAATCCTCAGTATCCGCAACTTCCGCGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: FQILSIRNFRGAEVC*QGRSGSRLQGAPPP
Trigger: CGGCGGTGGCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGGATACTGAGGATTTGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337817.10
ENST00000371877.8
CDS CAA 90 bp GATCAAATTATTCTCCTGCGCAACTTCCGCGGAGCTGAGGTCTGTTaGCAGGGTAGGAGCGGGAGCCGGCTCCAAGGAGCGCCACCGCCG +
Preference number: 6 (lower is better)
Translates to: DQIILLRNFRGAEVC*QGRSGSRLQGAPPP
Trigger: CGGCGGTGGCGCTCCTTGGAGCCGGCTCCCGCTCCTACCCTGCAAACAGACCTCAGCTCCGCGGAAGTTGCGCAGGAGAATAATTTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447475.7
CDS CCA 72 bp AAGTTCCGGGGCGGGGTAGGCTTTCCGCAAGCGCAATaGAAAGCCCAGCTAGGTAGACGGAGGAGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: KFRGGVGFPQAQ*KAQLGRRRSEW
Trigger: CCACTCGCTCCTCCGTCTACCTAGCTGGGCTTTCCATTGCGCTTGCGGAAAGCCTACCCCGCCCCGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CCA 72 bp TACGTATTGGTGTGCCGACCAATCAGCGCCCCGCACTaGTTCCGCGCTCGACCAATCCCAAGTCTTCTTGGA +
Preference number: 6 (lower is better)
Translates to: YVLVCRPISAPH*FRARPIPSLLG
Trigger: TCCAAGAAGACTTGGGATTGGTCGAGCGCGGAACCAGTGCGGGGCGCTGATTGGTCGGCACACCAATACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CCA 72 bp TTCAAGCGATTCTCCTGTCTCAGCTTCCCAATTAGCTaGTATTACAGGCGTCCACCACCCACCACCACGCCC +
Preference number: 6 (lower is better)
Translates to: FKRFSCLSFPIS*YYRRPPPTTTP
Trigger: GGGCGTGGTGGTGGGTGGTGGACGCCTGTAATACCAGCTAATTGGGAAGCTGAGACAGGAGAATCGCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS TCA 72 bp TTCAGTTCACAGCAACCTCCGCCTCCAAGGTTCAAGTaGTTCTTGAGCCTCAGCGTCCGAGGAGCTCAGACT +
Preference number: 6 (lower is better)
Translates to: FSSQQPPPPRFK*FLSLSVRGAQT
Trigger: AGTCTGAGCTCCTCGGACGCTGAGGCTCAAGAATCACTTGAACCTTGGAGGCGGAGGTTGCTGTGAACTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418131.1
CDS CCA 72 bp CAATGGAAAGCCCAGCTAGGTAGACGGAGGAGCGAGTaGCAGATGAAGCCGGAAGTGCTCTATAAGATGATC +
Preference number: 6 (lower is better)
Translates to: QWKAQLGRRRSE*QMKPEVLYKMI
Trigger: GATCATCTTATAGAGCACTTCCGGCTTCATCTGCCACTCGCTCCTCCGTCTACCTAGCTGGGCTTTCCATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337817.10
CDS CAA 90 bp CTGTGCAAGGCTGTGGGTTACATAAGTCCATATGTGAAGGCGGTCTaGCCACAGGCGATGGTTCAATATTGCTGTGGGGAGAACAACTGC +
Preference number: 6 (lower is better)
Translates to: LCKAVGYISPYVKAV*PQAMVQYCCGENNC
Trigger: GCAGTTGTTCTCCCCACAGCAATATTGAACCATCGCCTGTGGCAAGACCGCCTTCACATATGGACTTATGTAACCCACAGCCTTGCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp GCTGTGGGTTACATAAGTCCATATGTGAAGGCGGTCTaGCCACAGGCGATGGTTCAATATTGCTGTGGGGAG +
Preference number: 6 (lower is better)
Translates to: AVGYISPYVKAV*PQAMVQYCCGE
Trigger: CTCCCCACAGCAATATTGAACCATCGCCTGTGGCAAGACCGCCTTCACATATGGACTTATGTAACCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp GGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTaGGGTGTGTGCATGCACACTGTGCAAGGCTGTGGG +
Preference number: 6 (lower is better)
Translates to: GDSPIIPLSDSV*GVCMHTVQGCG
Trigger: CCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp GTGCAAGCCAGGGGAAGACTGTGCTTCCACAGAAACCAACTCCATTaGTCTTCCAGCTTGCACTGTGTCTTCAACAGCAGTTGTCTTAGG +
Preference number: 6 (lower is better)
Translates to: VQARGRLCFHRNQLH*SSSLHCVFNSSCLR
Trigger: CCTAAGACAACTGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCTGTGGAAGCACAGTCTTCCCCTGGCTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp GAGATAGTCCCATCATTCCATTATCTGACTCAGTCTTaGGTGTGTGCATGCACACTGTGCAAGGCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: EIVPSFHYLTQS*VCACTLCKAVG
Trigger: ACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp GGAAGACTGTGCTTCCACAGAAACCAACTCCATTTGTCTTCCAGCTaGCACTGTGTCTTCAACAGCAGTTGTCTTAGGGGAACAGGGCAT +
Preference number: 6 (lower is better)
Translates to: GRLCFHRNQLHLSSS*HCVFNSSCLRGTGH
Trigger: ATGCCCTGTTCCCCTAAGACAACTGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCTGTGGAAGCACAGTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp AAATCGTGTGGTTGGGACTGCGGGGCAAGAGAAGACTaGCTAGAATTAAGTGTGGAGGGTCTTATAGGATAC +
Preference number: 6 (lower is better)
Translates to: KSCGWDCGARED*LELSVEGLIGY
Trigger: GTATCCTATAAGACCCTCCACACTTAATTCTAGGCAGTCTTCTCTTGCCCCGCAGTCCCAACCACACGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp CCCATCATTCCATTATCTGACTCAGTCTTGGGTGTGTaGATGCACACTGTGCAAGGCTGTGGGTTACATAAG +
Preference number: 6 (lower is better)
Translates to: PIIPLSDSVLGV*MHTVQGCGLHK
Trigger: CTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp CCCTTCATTTTCTTTCTCAGGATGTTGAGTGAACTCTaGTTTCCCGGTTCGAAGGTTCACTGCAGGACTTGG +
Preference number: 6 (lower is better)
Translates to: PFIFFLRMLSEL*FPGSKVHCRTW
Trigger: CCAAGTCCTGCAGTGAACCTTCGAACCGGGAAAGCAGAGTTCACTCAACATCCTGAGAAAGAAAATGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp AGGGGAAGACTGTGCTTCCACAGAAACCAACTCCATTaGTCTTCCAGCTTGCACTGTGTCTTCAACAGCAGT +
Preference number: 6 (lower is better)
Translates to: RGRLCFHRNQLH*SSSLHCVFNSS
Trigger: ACTGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCTGTGGAAGCACAGTCTTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp GGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTaGGGTGTGTGCATGCACACTGTGCAAGGTTTGCAG +
Preference number: 6 (lower is better)
Translates to: GDSPIIPLSDSV*GVCMHTVQGLQ
Trigger: CTGCAAACCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS CAA 90 bp TATGCATCTGGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTaGGGTGTGTGCATGCACACTGTGCAAGGCTGTGGGTTACATAAG +
Preference number: 6 (lower is better)
Translates to: YASGDSPIIPLSDSV*GVCMHTVQGCGLHK
Trigger: CTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCCAGATGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 72 bp GTGCCTGAAGTAGTCTTAGCTGTCTGTCTTGTTCTGTaGGGAACCGATATGCATCTGGAGATAGTCCCATCA +
Preference number: 6 (lower is better)
Translates to: VPEVVLAVCLVL*GTDMHLEIVPS
Trigger: TGATGGGACTATCTCCAGATGCATATCGGTTCCTCACAGAACAAGACAGACAGCTAAGACTACTTCAGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp TATCTGACTCAGTCTTGGGTGTGTGCATGCACACTGTaGAAGGCTGTGGGTTACATAAGTCCATATGTGAAG +
Preference number: 6 (lower is better)
Translates to: YLTQSWVCACTL*KAVGYISPYVK
Trigger: CTTCACATATGGACTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp TCATTCCATTATCTGACTCAGTCTTGGGTGTGTGCATaGACACTGTGCAAGGCTGTGGGTTACATAAGTCCA +
Preference number: 6 (lower is better)
Translates to: SFHYLTQSWVCA*TLCKAVGYISP
Trigger: TGGACTTATGTAACCCACAGCCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp AGCTTGAGATACATAATGATATTCCAAAGCGCTCAGTaGAGCATGGACAGGAAACAAGAGAGCCAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SLRYIMIFQSAQ*SMDRKQESQWP
Trigger: AGGCCACTGGCTCTCTTGTTTCCTGTCCATGCTGCACTGAGCGCTTTGGAATATCATTATGTATCTCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS GCA 72 bp CCCATCATTCCATTATCTGACTCAGTCTTGGGTGTGTaGATGCACACTGTGCAAGGTTTGCAGTGTCTCAAA +
Preference number: 6 (lower is better)
Translates to: PIIPLSDSVLGV*MHTVQGLQCLK
Trigger: TTTGAGACACTGCAAACCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS CCA 72 bp CCAGTCTGTAAACACATGCTTACACTTTCTGCCAGCTaGCCACTTGGAAAGAACACAGGTACATCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: PVCKHMLTLSAS*PLGKNTGTSGS
Trigger: AGAACCTGATGTACCTGTGTTCTTTCCAAGTGGCCAGCTGGCAGAAAGTGTAAGCATGTGTTTACAGACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000418131.1
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp GAGATAGTCCCATCATTCCATTATCTGACTCAGTCTTaGGTGTGTGCATGCACACTGTGCAAGGTTTGCAGT +
Preference number: 6 (lower is better)
Translates to: EIVPSFHYLTQS*VCACTLCKVCS
Trigger: ACTGCAAACCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS CAA 72 bp AATCTCCAGTTGGCGTTGGGTTCCAAAGTGCACATTTaGATGGAGGAAAGTGGAAAGGTACCATCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: NLQLALGSKVHI*MEESGKVPSCL
Trigger: CAAGCAGGATGGTACCTTTCCACTTTCCTCCATCAAAATGTGCACTTTGGAACCCAACGCCAACTGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000413565.1
ENST00000436811.2
ENST00000447475.7
ENST00000682977.1
CDS CAA 72 bp TGCTTCCACAGAAACCAACTCCATTTGTCTTCCAGCTaGCACTGTGTCTTCAACAGCAGTTGTCTTAGGGGA +
Preference number: 6 (lower is better)
Translates to: CFHRNQLHLSSS*HCVFNSSCLRG
Trigger: TCCCCTAAGACAACTGCTGTTGAAGACACAGTGCAAGCTGGAAGACAAATGGAGTTGGTTTCTGTGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp GCTATAGCATTTGCCTCCATGCTCAAATCCACACCATaGGGGCTTAAGCCGCTCATGCCAACATTAGCAAAT +
Preference number: 6 (lower is better)
Translates to: AIAFASMLKSTP*GLKPLMPTLAN
Trigger: ATTTGCTAATGTTGGCATGAGCGGCTTAAGCCCCAATGGTGTGGATTTGAGCATGGAGGCAAATGCTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp AGTCCCACAAAGCTCTTCTCCAACACCCAAGGCAGCTaGAGATACATAATGATATTCCAAAGCGCTCAGTGC +
Preference number: 6 (lower is better)
Translates to: SPTKLFSNTQGS*RYIMIFQSAQC
Trigger: GCACTGAGCGCTTTGGAATATCATTATGTATCTCAAGCTGCCTTGGGTGTTGGAGAAGAGCTTTGTGGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS CAA 90 bp TATTTCAGAGCTATAGCATTTGCCTCCATGCTCAAATCCACACCATaGGGGCTTAAGCCGCTCATGCCAACATTAGCAAATGACATGCAG +
Preference number: 6 (lower is better)
Translates to: YFRAIAFASMLKSTP*GLKPLMPTLANDMQ
Trigger: CTGCATGTCATTTGCTAATGTTGGCATGAGCGGCTTAAGCCCCAATGGTGTGGATTTGAGCATGGAGGCAAATGCTATAGCTCTGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp TATGCATCTGGAGATAGTCCCATCATTCCATTATCTGACTCAGTCTaGGGTGTGTGCATGCACACTGTGCAAGGTTTGCAGTGTCTCAAA +
Preference number: 6 (lower is better)
Translates to: YASGDSPIIPLSDSV*GVCMHTVQGLQCLK
Trigger: TTTGAGACACTGCAAACCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGATGGGACTATCTCCAGATGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS TCA 72 bp CATATCTCCCTGAGGTCTCAAGGCTATAGGACTACTTaGAGAACAGAATGCATTACAGTACAGGGCTGGACA +
Preference number: 6 (lower is better)
Translates to: HISLRSQGYRTT*RTECITVQGWT
Trigger: TGTCCAGCCCTGTACTGTAATGCATTCTGTTCTTCAAGTAGTCCTATAGCCTTGAGACCTCAGGGAGATATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 72 bp AATTCCACACTGTCCAAACTCTCCCTGGAAGTGATATaGACTCTTAGGGAAAGCAGCTTACCACAGTCCAAG +
Preference number: 6 (lower is better)
Translates to: NSTLSKLSLEVI*TLRESSLPQSK
Trigger: CTTGGACTGTGGTAAGCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTTTGGACAGTGTGGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS TCA 72 bp AATGAAAACACCTCAGCAGATTGTAGCACAGATGGATaGGAATCACGTCACCCCATATCACCAGTACTGGCA +
Preference number: 6 (lower is better)
Translates to: NENTSADCSTDG*ESRHPISPVLA
Trigger: TGCCAGTACTGGTGATATGGGGTGACGTGATTCTCATCCATCTGTGCTACAATCTGCTGAGGTGTTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418131.1
CDS GCA 72 bp GTTTTGGGTTCTGGTGCATTCATGACTGATAATTACTaGTTTGGTAGACGGCTGCTCAGTTTCCTTGGAGGA +
Preference number: 6 (lower is better)
Translates to: VLGSGAFMTDNY*FGRRLLSFLGG
Trigger: TCCTCCAAGGAAACTGAGCAGCCGTCTACCAAAGCAGTAATTATCAGTCATGAATGCACCAGAACCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000684618.1
CDS GCA 72 bp TCATTCCATTATCTGACTCAGTCTTGGGTGTGTGCATaGACACTGTGCAAGGTTTGCAGTGTCTCAAAAGAG +
Preference number: 6 (lower is better)
Translates to: SFHYLTQSWVCA*TLCKVCSVSKE
Trigger: CTCTTTTGAGACACTGCAAACCTTGCACAGTGTGCATGCACACACCCAAGACTGAGTCAGATAATGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS CCA 72 bp GTTGGGTTCCAAAGTGCACATTTTGATGGAGGAAAGTaGAAAGGTACCATCCTGCTTGAAGGAAACCTGGTA +
Preference number: 6 (lower is better)
Translates to: VGFQSAHFDGGK*KGTILLEGNLV
Trigger: TACCAGGTTTCCTTCAAGCAGGATGGTACCTTTCCACTTTCCTCCATCAAAATGTGCACTTTGGAACCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000436811.2
ENST00000447475.7
ENST00000682977.1
CDS CAA 72 bp CCTCTGATGTTTCAGAATTGTTACTGGCACCCCCTGTaGGTCCAGTCTGTAAACACATGCTTACACTTTCTG +
Preference number: 6 (lower is better)
Translates to: PLMFQNCYWHPL*VQSVNTCLHFL
Trigger: CAGAAAGTGTAAGCATGTGTTTACAGACTGGACCAACAGGGGGTGCCAGTAACAATTCTGAAACATCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp CTTTGCAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTGATTaGGTATTCCTCTCAAGGAAGGCTCTCCAGCTTCAACTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: LCSVSKELVYPGLTD*VFLSRKALQLQLLD
Trigger: GTCCAGAAGTTGAAGCTGGAGAGCCTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGACACTGCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp GTTTGCAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTGATTaGGTATTCCTCTCAAGGAAGGCTCTCCAGCTTCAACTTCTGGAC +
Preference number: 6 (lower is better)
Translates to: VCSVSKELVYPGLTD*VFLSRKALQLQLLD
Trigger: GTCCAGAAGTTGAAGCTGGAGAGCCTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGACACTGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436811.2
ENST00000682940.1
CDS TCA 72 bp CAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTaGTTTGGTATTCCTCTCAAGGAAGGCTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: QCLKRAGLSWFN*FGIPLKEGSPA
Trigger: AGCTGGAGAGCCTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 72 bp AGTCAAATTCCACACTGTCCAAACTCTCCCTGGAAGTaGTATGAACTCTTAGGGAAAGCAGCTTACCACAGT +
Preference number: 6 (lower is better)
Translates to: SQIPHCPNSPWK*YELLGKAAYHS
Trigger: ACTGTGGTAAGCTGCTTTCCCTAAGAGTTCATATCACTTCCAGGGAGAGTTTGGACAGTGTGGAATTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS GCA 72 bp GGTTCCCTTTCTTATAGGCAGGTGGCTGTCTTACTTTaGAGTGTCTCAAAAGAGCTGGTTTATCCTGGTTTA +
Preference number: 6 (lower is better)
Translates to: GSLSYRQVAVLL*SVSKELVYPGL
Trigger: TAAACCAGGATAAACCAGCTCTTTTGAGACACTGCAAAGTAAGACAGCCACCTGCCTATAAGAAAGGGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp GCCAGAGCACAGTCCAAGGAATCTTTGCTACATATATaGCACTGTAGAGCCTTTAAAGCTGAACTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: ARAQSKESLLHI*HCRAFKAELKS
Trigger: TGACTTCAGTTCAGCTTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGATTCCTTGGACTGTGCTCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337817.10
ENST00000447475.7
ENST00000682977.1
CDS CCA 72 bp TGGACTGTGTTTCTCATCATAAAGCTGGGGTTGCAATaGCTTCAAGTGTTCCAAGTGGTTAATCAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: WTVFLIIKLGLQ*LQVFQVVNQRR
Trigger: CCTCCTTTGATTAACCACTTGGAACACTTGAAGCCATTGCAACCCCAGCTTTATGATGAGAAACACAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp GTTGGGTTCCAAAGTGCACATTTTGATGGAGGAAAGTaGAAAGGTACCATCCTGCTTGAAGGAAACCTTTTG +
Preference number: 6 (lower is better)
Translates to: VGFQSAHFDGGK*KGTILLEGNLL
Trigger: CAAAAGGTTTCCTTCAAGCAGGATGGTACCTTTCCACTTTCCTCCATCAAAATGTGCACTTTGGAACCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413565.1
CDS CAA 72 bp GTCCTCACTGGAAATTTTGGTATCATCTTGCTTCATTaGAGAGTCAGGCTCTTGATCCTCACCTGCTGCATT +
Preference number: 6 (lower is better)
Translates to: VLTGNFGIILLH*RVRLLILTCCI
Trigger: AATGCAGCAGGTGAGGATCAAGAGCCTGACTCTCAAATGAAGCAAGATGATACCAAAATTTCCAGTGAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp ATGGATGAGAATCACGTCACCCCATATCACCAGTACTaGCATACCATTAGTCCCCTCTACATTACATATAAC +
Preference number: 6 (lower is better)
Translates to: MDENHVTPYHQY*HTISPLYITYN
Trigger: GTTATATGTAATGTAGAGGGGACTAATGGTATGCCAGTACTGGTGATATGGGGTGACGTGATTCTCATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418131.1
CDS CAA 72 bp CTCAAGTTTCTTGCCAGAGCACAGTCCAAGGAATCTTaGCTACATATATGGCACTGTAGAGCCTTTAAAGCT +
Preference number: 6 (lower is better)
Translates to: LKFLARAQSKES*LHIWHCRAFKA
Trigger: AGCTTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGATTCCTTGGACTGTGCTCTGGCAAGAAACTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337817.10
ENST00000447475.7
ENST00000682977.1
CDS CAA 72 bp CTTGGAAGCCTTACTGAAAAACTCTGTTTCTGCATTTaGGCTTTCAGCGCTCAGTTCACAACGGATTGGATT +
Preference number: 6 (lower is better)
Translates to: LGSLTEKLCFCI*AFSAQFTTDWI
Trigger: AATCCAATCCGTTGTGAACTGAGCGCTGAAAGCCAAAATGCAGAAACAGAGTTTTTCAGTAAGGCTTCCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000436811.2
ENST00000447475.7
ENST00000682165.1
ENST00000682977.1
ENST00000683977.1
CDS CAA 72 bp GTCTCAAAAGAGCTGGTTTATCCTGGTTTAACTGATTaGGTATTCCTCTCAAGGAAGGCTCTCCAGCTTCAA +
Preference number: 6 (lower is better)
Translates to: VSKELVYPGLTD*VFLSRKALQLQ
Trigger: TTGAAGCTGGAGAGCCTTCCTTGAGAGGAATACCAAATCAGTTAAACCAGGATAAACCAGCTCTTTTGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp CTTAGGGAAAGCAGCTTACCACAGTCCAAGGAATCTTaGCTACATATATGGCACTGTAGAGCCTTTAAAGCT +
Preference number: 6 (lower is better)
Translates to: LRESSLPQSKES*LHIWHCRAFKA
Trigger: AGCTTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGATTCCTTGGACTGTGGTAAGCTGCTTTCCCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS CAA 90 bp TTCACCATTTCCAATGGAGTAGGCAGAGGGTTTGATTCTATGAAATaGCCATCCAACACAAGTGAAAGTTCAGGAACTGATGGTTGGATC +
Preference number: 6 (lower is better)
Translates to: FTISNGVGRGFDSMK*PSNTSESSGTDGWI
Trigger: GATCCAACCATCAGTTCCTGAACTTTCACTTGTGTTGGATGGCAATTTCATAGAATCAAACCCTCTGCCTACTCCATTGGAAATGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp TATCTGATGGTTGATGAAGCAAGGGTTGCATTACATGCTCAATTTTaGGTTCCTCTGATGTTTCAGAATTGTTACTGGCACCCCCTGTTG +
Preference number: 6 (lower is better)
Translates to: YLMVDEARVALHAQF*VPLMFQNCYWHPLL
Trigger: CAACAGGGGGTGCCAGTAACAATTCTGAAACATCAGAGGAACCAAAAATTGAGCATGTAATGCAACCCTTGCTTCATCAACCATCAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp CATTTAAAGTTATTTGCTAGAGTTACTGCTGCCCAATaGAAGTCAAATTCCACACTGTCCAAACTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: HLKLFARVTAAQ*KSNSTLSKLSL
Trigger: CAGGGAGAGTTTGGACAGTGTGGAATTTGACTTGCATTGGGCAGCAGTAACTCTAGCAAATAACTTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS CCA 72 bp AATGCTTTTGAAGGGCTTCAGACTGGACATCTTGAATaGATCCAACTGTGTTTGCTCCTTGCCAAGAATTTA +
Preference number: 6 (lower is better)
Translates to: NAFEGLQTGHLE*IQLCLLLAKNL
Trigger: TAAATTCTTGGCAAGGAGCAAACACAGTTGGATCCATTCAAGATGTCCAGTCTGAAGCCCTTCAAAAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp AGCTTACCACAGTCCAAGGAATCTTTGCTACATATATaGCACTGTAGAGCCTTTAAAGCTGAACTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: SLPQSKESLLHI*HCRAFKAELKS
Trigger: TGACTTCAGTTCAGCTTTAAAGGCTCTACAGTGCCATATATGTAGCAAAGATTCCTTGGACTGTGGTAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000682165.1
CDS CCA 72 bp CTCCCATTTAGTCAGGAATACTCATTGTATCACAGATaGCATGCCCAGCAAAACAGAAAATTTCTGAGTGCT +
Preference number: 6 (lower is better)
Translates to: LPFSQEYSLYHR*HAQQNRKFLSA
Trigger: AGCACTCAGAAATTTTCTGTTTTGCTGGGCATGCCATCTGTGATACAATGAGTATTCCTGACTAAATGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS CAA 72 bp AATCTTCATCTTCAACACCAGAGTCGTGATCATGTATaGGCATCTTCCCAGAAGATAACTTTTGGGAAGACC +
Preference number: 6 (lower is better)
Translates to: NLHLQHQSRDHV*ASSQKITFGKT
Trigger: GGTCTTCCCAAAAGTTATCTTCTGGGAAGATGCCAATACATGATCACGACTCTGGTGTTGAAGATGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000436811.2
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
CDS CAA 72 bp CTTCAGACTGGACATCTTGAATGGATCCAACTGTGTTaGCTCCTTGCCAAGAATTTAGCGGACTATATTGAA +
Preference number: 6 (lower is better)
Translates to: LQTGHLEWIQLC*LLAKNLADYIE
Trigger: TTCAATATAGTCCGCTAAATTCTTGGCAAGGAGCAAACACAGTTGGATCCATTCAAGATGTCCAGTCTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp CAAAGTACTACCCTCCCATTTAGTCAGGAATACTCATaGTATCACAGATGGCATGCCCAGCAAAACAGAAAA +
Preference number: 6 (lower is better)
Translates to: QSTTLPFSQEYS*YHRWHAQQNRK
Trigger: TTTTCTGTTTTGCTGGGCATGCCATCTGTGATACAATGAGTATTCCTGACTAAATGGGAGGGTAGTACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS CAA 90 bp TTTGAAGGGCTTCAGACTGGACATCTTGAATGGATCCAACTGTGTTaGCTCCTTGCCAAGAATTTAGCGGACTATATTGAATATGACTAT +
Preference number: 6 (lower is better)
Translates to: FEGLQTGHLEWIQLC*LLAKNLADYIEYDY
Trigger: ATAGTCATATTCAATATAGTCCGCTAAATTCTTGGCAAGGAGCAAACACAGTTGGATCCATTCAAGATGTCCAGTCTGAAGCCCTTCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp TCTAAGAAGGTGCCTACTGAATTCATGCTATTCATCTaGTTTAGCGTTTCAGAAGGTTGCAAACTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: SKKVPTEFMLFI*FSVSEGCKLSG
Trigger: TCCTGAAAGTTTGCAACCTTCTGAAACGCTAAAGCAGATGAATAGCATGAATTCAGTAGGCACCTTCTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS GCA 72 bp GACGTTTTACATCTAAGAAGGTGCCTACTGAATTCATaGTATTCATCTGCTTTAGCGTTTCAGAAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: DVLHLRRCLLNS*YSSALAFQKVA
Trigger: TGCAACCTTCTGAAACGCTAAAGCAGATGAATAGCATGAATTCAGTAGGCACCTTCTTAGATGTAAAACGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp TGTGCTTCTGTCTGTATTAATATGGAGAAGGCTGAATaGGTCACAATTATTTTGGTTCGATCGAGTGACAGA +
Preference number: 6 (lower is better)
Translates to: CASVCINMEKAE*VTIILVRSSDR
Trigger: TCTGTCACTCGATCGAACCAAAATAATTGTGACCCATTCAGCCTTCTCCATATTAATACAGACAGAAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CCA 72 bp AAACTAAGCCCCACTGTGCTTCTGTCTGTATTAATATaGAGAAGGCTGAATGGGTCACAATTATTTTGGTTC +
Preference number: 6 (lower is better)
Translates to: KLSPTVLLSVLI*RRLNGSQLFWF
Trigger: GAACCAAAATAATTGTGACCCATTCAGCCTTCTCCATATTAATACAGACAGAAGCACAGTGGGGCTTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 72 bp ATTAAGTGTGGAGGGTCTTATAGGATACTCTTCGTTTaGTACATTTCCAGCAGAAACTGTTTGGAGCTTTTC +
Preference number: 6 (lower is better)
Translates to: IKCGGSYRILFV*YISSRNCLELF
Trigger: GAAAAGCTCCAAACAGTTTCTGCTGGAAATGTACAAAACGAAGAGTATCCTATAAGACCCTCCACACTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp CTGCCTAGAATTAAGTGTGGAGGGTCTTATAGGATACTCTTCGTTTaGTACATTTCCAGCAGAAACTGTTTGGAGCTTTTCAAATATATC +
Preference number: 6 (lower is better)
Translates to: LPRIKCGGSYRILFV*YISSRNCLELFKYI
Trigger: GATATATTTGAAAAGCTCCAAACAGTTTCTGCTGGAAATGTACAAAACGAAGAGTATCCTATAAGACCCTCCACACTTAATTCTAGGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000418131.1
ENST00000447475.7
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS TCA 72 bp TACATATATGGCACTGTAGAGCCTTTAAAGCTGAACTaGAGTCATCTACACTGTGAACTATCATTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: YIYGTVEPLKLN*SHLHCELSFLL
Trigger: CAAGAGAAATGATAGTTCACAGTGTAGATGACTTCAGTTCAGCTTTAAAGGCTCTACAGTGCCATATATGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000433827.2
ENST00000436811.2
ENST00000447475.7
ENST00000682165.1
ENST00000682977.1
CDS TCA 72 bp ACAAGGTATTACAATGAAGCAATCAGAATGTCTGCATaGTTATGTTTAAGCAGAAATGGGTCTTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: TRYYNEAIRMSA*LCLSRNGSSVP
Trigger: TGGGACTGAAGACCCATTTCTGCTTAAACATAATCATGCAGACATTCTGATTGCTTCATTGTAATACCTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418131.1
ENST00000682165.1
CDS CAA 90 bp TGTTTCATCCATGGTAAGATATCCATATTTATAAGTCCCTTGAACTaGAGAAATATTCAGATTACTGCTCAAGTTTCTTGCCAGAGCACA +
Preference number: 6 (lower is better)
Translates to: CFIHGKISIFISPLN*RNIQITAQVSCQST
Trigger: TGTGCTCTGGCAAGAAACTTGAGCAGTAATCTGAATATTTCTCAAGTTCAAGGGACTTATAAATATGGATATCTTACCATGGATGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337817.10
ENST00000447475.7
ENST00000682977.1
CDS CAA 90 bp TGCAAAACTTCATTTGTAATATTTCTCAATACTGGCGTATCTGCGTaGGTCCCCACAGATTCACAGTTAGAACAATTAATTATTTCATGG +
Preference number: 6 (lower is better)
Translates to: CKTSFVIFLNTGVSA*VPTDSQLEQLIISW
Trigger: CCATGAAATAATTAATTGTTCTAACTGTGAATCTGTGGGGACCAACGCAGATACGCCAGTATTGAGAAATATTACAAATGAAGTTTTGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1
CDS CAA 90 bp TGTTTCATCCATGGTAAGATATCCATATTTATAAGTCCCTTGAACTaGAGAAATATTCAGATTACTGCTCAAGTTTCTTGCCAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CFIHGKISIFISPLN*RNIQITAQVSCQSC
Trigger: ACAGCTCTGGCAAGAAACTTGAGCAGTAATCTGAATATTTCTCAAGTTCAAGGGACTTATAAATATGGATATCTTACCATGGATGAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000436811.2
ENST00000682165.1
CDS CAA 72 bp TCATTTGTAATATTTCTCAATACTGGCGTATCTGCGTaGGTCCCCACAGATTCACAGTTAGAACAATTAATT +
Preference number: 6 (lower is better)
Translates to: SFVIFLNTGVSA*VPTDSQLEQLI
Trigger: AATTAATTGTTCTAACTGTGAATCTGTGGGGACCAACGCAGATACGCCAGTATTGAGAAATATTACAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000337817.10
ENST00000360380.7
ENST00000371877.8
ENST00000396221.6
ENST00000447475.7
ENST00000682940.1
ENST00000682977.1
ENST00000683977.1
ENST00000684618.1