RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STEAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000115107

Ensembl transcript IDs: ENST00000393106.6, ENST00000393107.2, ENST00000393110.7, ENST00000409811.5

Found 723 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCTGCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATaGTCCAGGGATGGCTCTGGGCAGAGCCGTTGCCTTCCCTCCCCT +
Preference number: 1 (lower is better)
Translates to: LLLPQVEGRDQPLLT*SRDGSGQSRCLPSP
Trigger: AGGGGAGGGAAGGCAACGGCTCTGCCCAGAGCCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp GAGCCATTCCCTGGCCCAGGGCAGGCAGCCAGTACCCACCGGGGTTaGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: EPFPGPGQAASTHRG*GSLVGLHCPCSPCL
Trigger: GAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGCCCTGGGCCAGGGAATGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp CCAGGGCAGGCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTaGTCTGTGGGCAGCGTGAACTTGATGGTGCTCTCCCTCTCCCAG +
Preference number: 1 (lower is better)
Translates to: PGQAPHTWLVFSARA*SVGSVNLMVLSLSQ
Trigger: CTGGGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR TCA 90 bp GGACGCACAGTCAGGGCCCAGTACACAGCCCGCCTGCCTTTCGTGTaGTTGTCCAGCAGGTGGCACCTGTTCCCTCCTGCCACCCACCTT +
Preference number: 1 (lower is better)
Translates to: GRTVRAQYTARLPFV*LSSRWHLFPPATHL
Trigger: AAGGTGGGTGGCAGGAGGGAACAGGTGCCACCTGCTGGACAATCACACGAAAGGCAGGCGGGCTGTGTACTGGGCCCTGACTGTGCGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 90 bp AGAACTTGTAGCGGCTCTCCTCGAAGGCGCGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCAGCACGAGGGCCACAAAGCCCAGTG +
Preference number: 1 (lower is better)
Translates to: RTCSGSPRRRGSSRR*ACAVCSARGPQSPV
Trigger: CACTGGGCTTTGTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCCTTCGAGGAGAGCCGCTACAAGTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR GCA 90 bp AAGACAGCAGTGGACGCACAGTCAGGGCCCAGTACACAGCCCGCCTaGCTTTCGTGTGATTGTCCAGCAGGTGGCACCTGTTCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: KTAVDAQSGPSTQPA*LSCDCPAGGTCSLL
Trigger: CAGGAGGGAACAGGTGCCACCTGCTGGACAATCACACGAAAGGCAGGCGGGCTGTGTACTGGGCCCTGACTGTGCGTCCACTGCTGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp GCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTaGCCATGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCC +
Preference number: 1 (lower is better)
Translates to: AASTHRGWGSLVGLH*PCSPCLSLVGNRWA
Trigger: GGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp GTCCAGCAGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTaGTTCCCTCTTGAGCACCTTCAGCCAGAGGTGGGTGGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: VQQVAPVPSCHPPYN*FPLEHLQPEVGGKG
Trigger: CCCCTTCCCACCCACCTCTGGCTGAAGGTGCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCTGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp GGAAGGGGAGGACGTGCACTGGGTTCTGCTATGTGCCAGCATCTTTaGTATAAGGAGCCATTCCCTGGCCCAGGGCAGGCAGCCAGTACC +
Preference number: 1 (lower is better)
Translates to: GRGGRALGSAMCQHL*YKEPFPGPGQAAST
Trigger: GGTACTGGCTGCCTGCCCTGGGCCAGGGAATGGCTCCTTATACCAAAGATGCTGGCACATAGCAGAACCCAGTGCACGTCCTCCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp GCAGGGGCAGCCTCATCTGTGACATTCTCTCTGGGCAGCCTTCACTaGCCCTACTCTCTTCCTTCCATCAGAAGATGGCTTTGGGCCCAG +
Preference number: 1 (lower is better)
Translates to: AGAASSVTFSLGSLH*PYSLPSIRRWLWAQ
Trigger: CTGGGCCCAAAGCCATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATGTCACAGATGAGGCTGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp ACAAGTTTCTGCCGCTCAGCCTTGGCACAGCAGATGGAAAATACCTaGAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATG +
Preference number: 1 (lower is better)
Translates to: TSFCRSALAQQMENT*RKSFPGMAFPASVM
Trigger: CATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAAACTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATaGTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTT +
Preference number: 1 (lower is better)
Translates to: STHRGWGSLVGLHCP*SPCLSLVGNRWALV
Trigger: AACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp TGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTaGCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCA +
Preference number: 1 (lower is better)
Translates to: CRKSFPGMAFPASVM*LMSYPCSGLFSCFS
Trigger: TGAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp CCTGCCTTTCGTGTGATTGTCCAGCAGGTGGCACCTGTTCCCTCCTaGCACCCACCTTATAATTGCTTCCCTCTTGAGCACCTTCAGCCA +
Preference number: 1 (lower is better)
Translates to: PAFRVIVQQVAPVPS*HPPYNCFPLEHLQP
Trigger: TGGCTGAAGGTGCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCTGCTGGACAATCACACGAAAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp CTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATaGCTTTGGGCCCAGGAGACTCATGAAGACCTCACCCTCTTTGTC +
Preference number: 1 (lower is better)
Translates to: LGSLHWPYSLPSIRR*LWAQETHEDLTLFV
Trigger: GACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp GATGGAAAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTaGATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTT +
Preference number: 1 (lower is better)
Translates to: DGKYLQEELPRHGLP*IGHVPNELSLQWAL
Trigger: AAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp CTTCTCAGCAAGGCTCTCTGTGGGCCACAGCTGATGCTCCATCAGTaGCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGGCACAGC +
Preference number: 1 (lower is better)
Translates to: LLSKALCGPQLMLHQ*QFMRQVSAAQPWHS
Trigger: GCTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGCTGTGGCCCACAGAGAGCCTTGCTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp CAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGGCACAGCAGATaGAAAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTG +
Preference number: 1 (lower is better)
Translates to: QFMRQVSAAQPWHSR*KIPAGRASPAWPSL
Trigger: CAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 90 bp CTCTGCCAGAGGACATTTGGAGTCCCCAATATTTTTCCTCAGGACTaGCTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCT +
Preference number: 1 (lower is better)
Translates to: LCQRTFGVPNIFPQD*LREDSPSAQAGLNS
Trigger: AGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTCAGTCCTGAGGAAAAATATTGGGGACTCCAAATGTCCTCTGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp GGCATGGCCTTCCCTGCATCGGTCATGTGCCTAATGAGCTATCCTTaGAGTGGGCTCTTCTCCTGCTTTTCACTGAAGAACCCTTATGTG +
Preference number: 1 (lower is better)
Translates to: GMAFPASVMCLMSYP*SGLFSCFSLKNPYV
Trigger: CACATAAGGGTTCTTCAGTGAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCCATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp GGCCTTCCCTGCATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTaGGCTCTTCTCCTGCTTTTCACTGAAGAACCCTTATGTGCTGCA +
Preference number: 1 (lower is better)
Translates to: GLPCIGHVPNELSLQ*ALLLLFTEEPLCAA
Trigger: TGCAGCACATAAGGGTTCTTCAGTGAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp CTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTaGCACAGCAGATGGAAAATACCTGCAGGAAGAGCTTCCCCGGCA +
Preference number: 1 (lower is better)
Translates to: LHQCQFMRQVSAAQP*HSRWKIPAGRASPA
Trigger: TGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp GCCACAGCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTaGCGCTCAGCCTTGGCACAGCAGATGGAAAATACCTGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: ATADAPSVPIYETSF*RSALAQQMENTCRK
Trigger: CTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp AGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATGGCTTTaGGCCCAGGAGACTCATGAAGACCTCACCCTCTTTGTCTTCAAA +
Preference number: 1 (lower is better)
Translates to: SLHWPYSLPSIRRWL*AQETHEDLTLFVFK
Trigger: TTTGAAGACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 90 bp CTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTaGGCCACAGCTGATGCTCCATCAGTGCCAATTTATGAGACAAGT +
Preference number: 1 (lower is better)
Translates to: LKSLLYLPPSQQGSL*ATADAPSVPIYETS
Trigger: ACTTGTCTCATAAATTGGCACTGATGGAGCATCAGCTGTGGCCCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 90 bp CTCTCTTCCTTCCATCAGAAGATGGCTTTGGGCCCAGGAGACTCATaGAGACCTCACCCTCTTTGTCTTCAAAGATGCTTTTTCTGTGGC +
Preference number: 1 (lower is better)
Translates to: LSSFHQKMALGPGDS*RPHPLCLQRCFFCG
Trigger: GCCACAGAAAAAGCATCTTTGAAGACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGGAAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 90 bp TATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTaGGGCACTTTTGTACCCAGAGGCACATGGAATTTACCAGGCTGT +
Preference number: 1 (lower is better)
Translates to: YQPQTVAFGISRACR*GTFVPRGTWNLPGC
Trigger: ACAGCCTGGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 90 bp GAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTaGACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCC +
Preference number: 1 (lower is better)
Translates to: EFGPQTSYLHTVIPL*TTKKRKPNGLRAPS
Trigger: GGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR GCA 90 bp CAAAAAGTGTGTGTATATCTCTGCAAATGTCACAATAGCATGATCTaGTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTT +
Preference number: 1 (lower is better)
Translates to: QKVCVYLCKCHNSMI*SSLNVRHLFLNLQV
Trigger: AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTGACATTTGCAGAGATATACACACACTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR CAA 90 bp GGAGCCATTCCCTGGCCCAGGGCAGGCAGCCAGTACCCACCGGGGTaGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GAIPWPRAGSQYPPG*GIIGGSPLPMLSLP
Trigger: AGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGCCCTGGGCCAGGGAATGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp GCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCA +
Preference number: 2 (lower is better)
Translates to: APHTWLVFSARAWSVGSVGSSRR*ACAVCS
Trigger: TGAGCACACTGCACACGCTCACCTACGGCTGGACCC...CACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR-3UTR TCA 90 bp TCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTTGATGGTGCTCTCCCTCTCCGGGCTTTGGCCAGGATaGCGACGCAGGGCACCAGCA +
Preference number: 2 (lower is better)
Translates to: SARAWSVGSVNLMVLSLSGLWPG*RRRAPA
Trigger: TGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCC...GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR CAA 90 bp ATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGAAACAGGGCTTaGGCCAGGATGACGACGCAGGGCACCAGCAGCGTGAGCGTGAAG +
Preference number: 2 (lower is better)
Translates to: ILASLRLMQGRRNRA*ARMTTQGTSSVSVK
Trigger: CTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR-3UTR TCA 90 bp CCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTGGCGAGTCTGCGGCTaGTGCAGGGCAGGAGAAACA +
Preference number: 2 (lower is better)
Translates to: PHTWLVFSARAWSVGSVNWRVCG*CRAGET
Trigger: TGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCA...GTTCACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR-3UTR CCA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATCACATGCTCCAGGGATaGCTCTGGGCAGAGCCGTTG +
Preference number: 2 (lower is better)
Translates to: TSCGPGGALPSCALGQQHHMLQG*LWAEPL
Trigger: CAACGGCTCTGCCCAGAGCCATCCCTGGAGCATGTG...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 90 bp CCTGGCCCAGGGCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATaGGTGGGTCTCCATTGCCCATGCTCTCCCTGCCTCTCATTAGTA +
Preference number: 2 (lower is better)
Translates to: PGPGQAASTHRGWGS*VGLHCPCSPCLSLV
Trigger: TACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGCCCTGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATCTCTCCCCCTTGGGCTaGTTTCTAAAGGGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: TSCGPGGALPSCALGQQHLSPLG*FLKGLL
Trigger: GAGCAGACCCTTTAGAAATCAGCCCAAGGGGGAGAG...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp CGGATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGAAACAGGGCTTTGGCCGGCCACAAAGCCCAGTaGGGACTCAAAAGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: RILASLRLMQGRRNRALAGHKAQ*GLKSQH
Trigger: ATGCTGGCTTTTGAGTCCTCACTGGGCTTTGTGGCC...GGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR-3UTR GCA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCCGGCATGGCCTTCCCTaGATCGGTCATGTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPRHGLP*IGHVPN
Trigger: ATTAGGCACATGACCGATGCAGGGAAGGCCATGCCG...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 90 bp GGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATaGCCCATGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGC +
Preference number: 2 (lower is better)
Translates to: GSQYPPGLGIIGGSP*PMLSLPLISRESMG
Trigger: GCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCGGCCCAGGAGACTCATaGAGACCTCACCCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPGPGDS*RPHPLC
Trigger: ACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCC...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCCGGCATGGCCTTCCCTaGATCGGTCATGTGCCTAAT +
Preference number: 2 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPRHGLP*IGHVPN
Trigger: ATTAGGCACATGACCGATGCAGGGAAGGCCATGCCG...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: GFPEHVVEALLYPEAHGIAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCTCTGGGCAGAGCCGTTaGCTTCCCTCCCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: RWHLFPPATHLIIASLLSSGQSR*LPSPSE
Trigger: CTCTGAAGGGGAGGGAAGGCAACGGCTCTGCCCAGA...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGCCCACTCAGCAAGGATaGGGTGGAGCAGCTTCAGCC +
Preference number: 2 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRPTQQG*GGAASA
Trigger: GGCTGAAGCTGCTCCACCTCATCCTTGCTGAGTGGG...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGGGCCCAGGAGACTCATaGAGACCTCACCCTCTTTGT +
Preference number: 2 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVGPGDS*RPHPLC
Trigger: ACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCC...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGCTGTGGCCCCGGCGGTaGTCTTCCCTCTTGTGCTTT +
Preference number: 2 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRLWPRR*SSLLCF
Trigger: AAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAG...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCGAGCTATCCTTGCAGTaGGCTCTTCTCCTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPELSLQ*ALLLLF
Trigger: GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTC...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGCACAATAGCATGATCTaGTCTTCTCTTAACGTACGG +
Preference number: 2 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGHNSMI*SSLNVR
Trigger: CCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTCAGCCGCTGCTCACATaGTCCAGGGATGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PVWFSGSSARGHLESPIFQPLLT*SRDGSG
Trigger: CCCAGAGCCATCCCTGGAGCATGTGAGCAGCGGCTG...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCAAGTGTAATGCCCCATaGGGAGGAAGTTGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RWHLFPPATHLIIASLLSKCNAP*GGSWSQ
Trigger: CTGGCTCCAACTTCCTCCTCATGGGGCATTACACTT...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGAGCAAGGATGGCCTGTaGCTGGAGGACAGACGTCCT +
Preference number: 2 (lower is better)
Translates to: LSREHLFLHRGSKLESVGSKDGL*LEDRRP
Trigger: AGGACGTCTGTCCTCCAGTCACAGGCCATCCTTGCT...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGGCTCTGCAAGAGCCTTaGGGAAGTAGCAAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVALQEP*GSSKRE
Trigger: TTCCCTTTTGCTACTTCCCCAAGGCTCTTGCAGAGC...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp GCAGATGGAAAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTGAGAAGGCACAGTaGTTTAAAGGACGCTCATCG +
Preference number: 2 (lower is better)
Translates to: ADGKYLQEELPRHGLPCIGEKAQ*FKGRSS
Trigger: CGATGAGCGTCCTTTAAACCACTGTGCCTTCTCACC...GATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCCTGCCAGAGGACATTTaGAGTCCCCAATATTTTTCC +
Preference number: 2 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPLPEDI*SPQYFS
Trigger: GGAAAAATATTGGGGACTCCAAATGTCCTCTGGCAG...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 90 bp GCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTaGGCACAGCAGATGGAAAATACCTGCAGGAAGAGCTTCCCCGGC +
Preference number: 2 (lower is better)
Translates to: APSVPIYETSFCRSA*AQQMENTCRKSFPG
Trigger: GCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACG +
Preference number: 2 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGNVTIA*SALLLT
Trigger: CGTTAAGAGAAGAGCAGATCATGCTATTGTGACATT...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCGGGCAGCCTCATCTGTaGCATTCTCTCTGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTGQPHL*HSLWAA
Trigger: GGCTGCCCAGAGAGAATGTCACAGATGAGGCTGCCC...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR-3UTR GCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCTGCTCTTCCCTCTTGTaGTTTGGGGCAGCAGCATTT +
Preference number: 2 (lower is better)
Translates to: RWHLFPPATHLIIASLLSCSSLL*FGAAAF
Trigger: AAATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCA...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGAGGACAGACGTCCTGTaGCCCCGGCGGTGCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LDINLRLWHLGFPEHVVERTDVL*PRRCSS
Trigger: GGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCT...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGAGGGAGCAGCAAGGATaGCCTGTGACTGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: ADAPSVPIYETSFCRSALREQQG*PVTGGQ
Trigger: CTGTCCTCCAGTCACAGGCCATCCTTGCTGCTCCCT...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 90 bp CGGCATGGCCTTCCCTGCATCGGTCATGTGCCTAATGAGCTATCCTaGCAGTGGGCTCTTCTCCTGCTTTTCACTGAAGAACCCTTATGT +
Preference number: 2 (lower is better)
Translates to: RHGLPCIGHVPNELS*QWALLLLFTEEPLC
Trigger: ACATAAGGGTTCTTCAGTGAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCCATGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGGGCAGGGCTCAACTCTaGCGCCCGGGGAGCTTTACT +
Preference number: 2 (lower is better)
Translates to: LDINLRLWHLGFPEHVVEGRAQL*RPGSFT
Trigger: AGTAAAGCTCCCCGGGCGTCAGAGTTGAGCCCTGCC...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCAGCAAGGATGGCCTGTaGCTGGAGGACAGACGTCCT +
Preference number: 2 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTSKDGL*LEDRRP
Trigger: AGGACGTCTGTCCTCCAGTCACAGGCCATCCTTGCT...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTAGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 2 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR-3UTR GCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCAGATGGAAAATACCTaGAGGAAGAGCTTCCCCGGC +
Preference number: 2 (lower is better)
Translates to: ADAPSVPIYETSFCRSALQMENT*RKSFPG
Trigger: GCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGATGCTGCTGCCCCAGGTaGAGGGAAGAGACCAGCCGC +
Preference number: 2 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRCCCPR*REETSR
Trigger: GCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCA...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACG +
Preference number: 2 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPNVTIA*SALLLT
Trigger: CGTTAAGAGAAGAGCAGATCATGCTATTGTGACATT...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 90 bp AGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGGCACTTTaGTACCCAGAGGCACATGGAATTTACCAGGCTGTGGAGATGATG +
Preference number: 2 (lower is better)
Translates to: RLWHLGFPEHVVEAL*YPEAHGIYQAVEMM
Trigger: CATCATCTCCACAGCCTGGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 90 bp ATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTaGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCAGGCTG +
Preference number: 2 (lower is better)
Translates to: ISTSDCGIWDFQSMS*RHFCTQRHMEFTRL
Trigger: CAGCCTGGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGATTTTTCCTCAGGACTaGCTTCGTGAAGACAGTCCT +
Preference number: 2 (lower is better)
Translates to: ADAPSVPIYETSFCRSALIFPQD*LREDSP
Trigger: AGGACTGTCTTCACGAAGTCAGTCCTGAGGAAAAAT...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCACAGTTATACCACTTTaGACCACCAAGAAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPTVIPL*TTKKRK
Trigger: TTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR TCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCATCAGTGCCAATTTATaGGACAAGTTTCTGCCGCTC +
Preference number: 2 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTISANL*DKFLPL
Trigger: GAGCGGCAGAAACTTGTCTCATAAATTGGCACTGAT...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTGATGGGCCCTTGTTATaGCAAGGCAATGCTAAAATC +
Preference number: 2 (lower is better)
Translates to: GFPEHVVEALLYPEAHGIDGPLL*QGNAKI
Trigger: GATTTTAGCATTGCCTTGGCATAACAAGGGCCCATC...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCGATGGGCCCTTGTTATaGCAAGGCAATGCTAAAATC +
Preference number: 2 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTDGPLL*QGNAKI
Trigger: GATTTTAGCATTGCCTTGGCATAACAAGGGCCCATC...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATCTCAAACCTCCTATTTaGACACAGTTATACCACTTT +
Preference number: 2 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDLKPPI*TQLYHF
Trigger: AAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAG...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCACCTGTTCCCTCCTaGCACCCACCTTATAATTGC +
Preference number: 2 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRAPVPS*HPPYNC
Trigger: GCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGC...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGATATGAGACAAGTTTCTaGCGCTCAGCCTTGGCACAG +
Preference number: 2 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRYETSF*RSALAQ
Trigger: CTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATA...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAACGTGCACTGGGTTCTaGTATGTGCCAGCATCTTTG +
Preference number: 2 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRTCTGF*YVPASL
Trigger: CAAAGATGCTGGCACATAGCAGAACCCAGTGCACGT...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACACTCAAAAGCCAGCATaGCACTGTTGGCTGCACGCA +
Preference number: 2 (lower is better)
Translates to: KPPICTQLYHFAPPRKENTQKPA*HCWLHA
Trigger: TGCGTGCAGCCAACAGTGGCATGCTGGCTTTTGAGT...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGATGCTCTAGGCCTTCCTaGGAGTCATTCAAACTGAAG +
Preference number: 2 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRCSRPS*ESFKLK
Trigger: CTTCAGTTTGAATGACTCCCAGGAAGGCCTAGAGCA...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR GCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCACAGTTATACCACTTTaGACCACCAAGAAAAGAAAA +
Preference number: 2 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEITVIPL*TTKKRK
Trigger: TTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR CCA 72 bp CCCGGGGTCCAGAGCCCAGGGCAGGCACCTCATACGTaGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGC +
Preference number: 3 (lower is better)
Translates to: PGVQSPGQAPHT*LVFSARAWSVG
Trigger: GCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTGCCCTGGGCTCTGGACCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR TCA 72 bp AGCGGCTCTCCTCGAAGGCGCGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCAGCACGAGGGCCACAA +
Preference number: 3 (lower is better)
Translates to: SGSPRRRGSSRR*ACAVCSARGPQ
Trigger: TTGTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCCTTCGAGGAGAGCCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR GCA 72 bp CCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATaGTCCAGGGATGGCTCTGGGCAGAGCCGTTGCCTT +
Preference number: 3 (lower is better)
Translates to: PQVEGRDQPLLT*SRDGSGQSRCL
Trigger: AAGGCAACGGCTCTGCCCAGAGCCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp AGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAGGGCAGGCACCTCATA +
Preference number: 3 (lower is better)
Translates to: RKPNGLRAPSLV*PGSRAQGRHLI
Trigger: TATGAGGTGCCTGCCCTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR-3UTR CAA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATCTCTGGGCAGAGCCGTaGCCTTCCCTCCCCTTCAGA +
Preference number: 3 (lower is better)
Translates to: TSCGPGGALPSCALGQQHLWAEP*PSLPFR
Trigger: TCTGAAGGGGAGGGAAGGCAACGGCTCTGCCCAGAG...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp TCTCCCAGCCTCTCCGGATCCTGGCGAGTCTGCGGCTaGTGCAGGGCAGGAGAAACAGGGCTTTGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: SPSLSGSWRVCG*CRAGETGLWPG
Trigger: TCCTGGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCGGAGAGGCTGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR CCA 72 bp GCAAGGATGGCCTGTGACTGGAGGACAGACGTCCTGTaGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGG +
Preference number: 3 (lower is better)
Translates to: ARMACDWRTDVL*PRRCSSLLCFG
Trigger: CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCAGTCACAGGCCATCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp GTGGACGCACAGTCAGGGCCCAGTACACAGCCCGCCTaGCTTTCGTGTGATTGTCCAGCAGGTGGCACCTGT +
Preference number: 3 (lower is better)
Translates to: VDAQSGPSTQPA*LSCDCPAGGTC
Trigger: ACAGGTGCCACCTGCTGGACAATCACACGAAAGGCAGGCGGGCTGTGTACTGGGCCCTGACTGTGCGTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp TGTGACTGGAGGACAGACGTCCTGTGGCCCCGGCGGTaGTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATTT +
Preference number: 3 (lower is better)
Translates to: CDWRTDVLWPRR*SSLLCFGAAAF
Trigger: AAATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCAGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 72 bp AGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTaGGTCTCCATTGCCCATGCTCTCCCTGCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: RQPVPTGVGDHW*VSIAHALPASH
Trigger: ATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCTTCTGCCGCTCAGCCTaGGCACAGCAGATGGAAAAT +
Preference number: 3 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPFCRSA*AQQMEN
Trigger: ATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAA...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp AGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTaGCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: SFPGMAFPASVM*LMSYPCSGLFS
Trigger: GGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 72 bp GGACGTGCACTGGGTTCTGCTATGTGCCAGCATCTTTaGTATAAGGAGCCATTCCCTGGCCCAGGGCAGGCA +
Preference number: 3 (lower is better)
Translates to: GRALGSAMCQHL*YKEPFPGPGQA
Trigger: TGCCTGCCCTGGGCCAGGGAATGGCTCCTTATACCAAAGATGCTGGCACATAGCAGAACCCAGTGCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp ACCCAGAGGCACATGGAATTTACCAGGCTGTGGAGATaGTGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGG +
Preference number: 3 (lower is better)
Translates to: TQRHMEFTRLWR*CALGMLLPVAW
Trigger: CCAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAATTCCATGTGCCTCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp TACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTaGATCGGTCATGTGCCTAATGAGCTATCCTTGCAG +
Preference number: 3 (lower is better)
Translates to: YLQEELPRHGLP*IGHVPNELSLQ
Trigger: CTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp CGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATaGTCTCCCTGCCTCTCATTAGTAGGGAATCGATGG +
Preference number: 3 (lower is better)
Translates to: RGWGSLVGLHCP*SPCLSLVGNRW
Trigger: CCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp ACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTaGCCATGCTCTCCCTGCCTCTCATTAGTAGGGAAT +
Preference number: 3 (lower is better)
Translates to: THRGWGSLVGLH*PCSPCLSLVGN
Trigger: ATTCCCTACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp GTGGGAAGGGGAGGACGTGCACTGGGTTCTGCTATGTaGCAGCATCTTTGGTATAAGGAGCCATTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: VGRGGRALGSAM*QHLWYKEPFPG
Trigger: GCCAGGGAATGGCTCCTTATACCAAAGATGCTGGCACATAGCAGAACCCAGTGCACGTCCTCCCCTTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp GTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTaGTTCCCTCTTGAGCACCTTCAGCCAGAGGTGGGT +
Preference number: 3 (lower is better)
Translates to: VAPVPSCHPPYN*FPLEHLQPEVG
Trigger: ACCCACCTCTGGCTGAAGGTGCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp GAGGCACATGGAATTTACCAGGCTGTGGAGATGATGTaGTCTCGGGATGCTGCTGCCAGTAGCCTGGTGAGG +
Preference number: 3 (lower is better)
Translates to: EAHGIYQAVEMM*SRDAAASSLVR
Trigger: CCTCACCAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAATTCCATGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp CCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGAGGTaGCGTCACTCTCACAGGAGGATCCATTTGCAGGCT +
Preference number: 3 (lower is better)
Translates to: PKPGSLMALERR*RHSHRRIHLQA
Trigger: AGCCTGCAAATGGATCCTCCTGTGAGAGTGACGTCACCTCCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp CGTGTGATTGTCCAGCAGGTGGCACCTGTTCCCTCCTaGCACCCACCTTATAATTGCTTCCCTCTTGAGCAC +
Preference number: 3 (lower is better)
Translates to: RVIVQQVAPVPS*HPPYNCFPLEH
Trigger: GTGCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCTGCTGGACAATCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGGGAATCGATGGGCCCTaGTTATGCCAAGGCAATGCT +
Preference number: 3 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLGIDGP*LCQGNA
Trigger: AGCATTGCCTTGGCATAACAAGGGCCCATCGATTCC...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp ACTTTCAGGGAAAATGTCTCCCCCACTCAGCAAGGATaGGGTGGAGCAGCTTCAGCCCAATCCCTCCATCCT +
Preference number: 3 (lower is better)
Translates to: TFRENVSPTQQG*GGAASAQSLHP
Trigger: AGGATGGAGGGATTGGGCTGAAGCTGCTCCACCTCATCCTTGCTGAGTGGGGGAGACATTTTCCCTGAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 72 bp CTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATaGCTTTGGGCCCAGGAGACTCATGAAGACCTCACC +
Preference number: 3 (lower is better)
Translates to: LHWPYSLPSIRR*LWAQETHEDLT
Trigger: GGTGAGGTCTTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 72 bp TGGCCCTACTCTCTTCCTTCCATCAGAAGATGGCTTTaGGCCCAGGAGACTCATGAAGACCTCACCCTCTTT +
Preference number: 3 (lower is better)
Translates to: WPYSLPSIRRWL*AQETHEDLTLF
Trigger: AAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGGAAGAGAGTAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGCAGTACCCACCGGGGTaGGGGATCATTGGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: LDINLRLWHLGFPEHVVEQYPPG*GIIGGS
Trigger: AGACCCACCAATGATCCCCAACCCCGGTGGGTACTG...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp AGGACATTTGGAGTCCCCAATATTTTTCCTCAGGACTaGCTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: RTFGVPNIFPQD*LREDSPSAQAG
Trigger: CCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTCAGTCCTGAGGAAAAATATTGGGGACTCCAAATGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CCA 72 bp TGTCTTCAAAGATGCTTTTTCTGTGGCAGATCAACCTaGTTCTGCAGAGGGTTGGGGGCTCAGCCGAGAACA +
Preference number: 3 (lower is better)
Translates to: CLQRCFFCGRST*FCRGLGAQPRT
Trigger: TGTTCTCGGCTGAGCCCCCAACCCTCTGCAGAACCAGGTTGATCTGCCACAGAAAAAGCATCTTTGAAGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp CACTCTCACAGGAGGATCCATTTGCAGGCTCTATGGTaGCTTCTGACTTTCAGGGAAAATGTCTCCCCCACT +
Preference number: 3 (lower is better)
Translates to: HSHRRIHLQALW*LLTFRENVSPT
Trigger: AGTGGGGGAGACATTTTCCCTGAAAGTCAGAAGTCACCATAGAGCCTGCAAATGGATCCTCCTGTGAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp TTCCCTGCATCGGTCATGTGCCTAATGAGCTATCCTTaGAGTGGGCTCTTCTCCTGCTTTTCACTGAAGAAC +
Preference number: 3 (lower is better)
Translates to: FPASVMCLMSYP*SGLFSCFSLKN
Trigger: GTTCTTCAGTGAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGCCAGCATGCCACTGTaGGCTGCACGCATCCTGCAT +
Preference number: 3 (lower is better)
Translates to: PICTQLYHFAPPRKENLTASMPL*AARILH
Trigger: ATGCAGGATGCGTGCAGCCAACAGTGGCATGCTGGC...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR GCA 72 bp GATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTaGCGCTCAGCCTTGGCACAGCAGATGGAAAATACC +
Preference number: 3 (lower is better)
Translates to: DAPSVPIYETSF*RSALAQQMENT
Trigger: GGTATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGTTGAGTCCCAGGAATTaGGACCTCAAACCTCCTATT +
Preference number: 3 (lower is better)
Translates to: GKEITLVPKPGSLMALERLSPRN*DLKPPI
Trigger: AATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAA...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAATTGGTGGGTCTCCATaGCCCATGCTCTCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRIGGSP*PMLSLP
Trigger: AGGCAGGGAGAGCATGGGCAATGGAGACCCACCAAT...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGAAGACCTCACCCTCTTaGTCTTCAAAGATGCTTTTT +
Preference number: 3 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWKTSPS*SSKMLF
Trigger: AAAAAGCATCTTTGAAGACAAAGAGGGTGAGGTCTT...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp TTCCATCAGAAGATGGCTTTGGGCCCAGGAGACTCATaGAGACCTCACCCTCTTTGTCTTCAAAGATGCTTT +
Preference number: 3 (lower is better)
Translates to: FHQKMALGPGDS*RPHPLCLQRCF
Trigger: AAAGCATCTTTGAAGACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR TCA 72 bp CAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTaGGGCACTTTTGTACCCAGAGGCACATGGAATTTA +
Preference number: 3 (lower is better)
Translates to: QTVAFGISRACR*GTFVPRGTWNL
Trigger: TAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGACCTAATGAGCTATCCTaGCAGTGGGCTCTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRPNELS*QWALLL
Trigger: CAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGG...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTaGACCACCAAGAAAAGAAAACCTAACGGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: PQTSYLHTVIPL*TTKKRKPNGLR
Trigger: CCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR-3UTR CAA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCAAGACCTCACCCTCTTaGTCTTCAAAGATGCTTTTT +
Preference number: 3 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTKTSPS*SSKMLF
Trigger: AAAAAGCATCTTTGAAGACAAAGAGGGTGAGGTCTT...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR-3UTR CAA 90 bp GATAAATCGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATTTGAGTCCCAGGAATTaGGACCTCAAACCTCCTATT +
Preference number: 3 (lower is better)
Translates to: DKSNPPQHKPLLYKKCVYLSPRN*DLKPPI
Trigger: AATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAA...ATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCGATTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR GCA 72 bp TTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTaGACACAGTTATACCACTTTGCACCACCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LSPRNLDLKPPI*TQLYHFAPPRK
Trigger: TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR TCA 72 bp AAGTGTGTGTATATCTCTGCAAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACGTACGGCACTTGTTTT +
Preference number: 3 (lower is better)
Translates to: KCVYISANVTIA*SALLLTYGTCF
Trigger: AAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTGACATTTGCAGAGATATACACACACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GGCGCGGGTCCAGCCGTAGGTGAGCGTGTGCAGTGTGCTCAGCACGAGGGCCACGGAAGCGCTGGTACTTaGTGCCGCGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GAGPAVGERVQCAQHEGHGSAGT*CRAAAA
Trigger: TGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCC...GTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp GCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAGCGCTGGTACTTGGTaGCGCGCCGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: APHTWLVFSARAWSVGSVSAGTW*RAAAAG
Trigger: CCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCT...CACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp GGCGCGGGTCCAGCCGTAGGTGAGCGTGTGCAGTGTGCTCAGCACGAGGGCCACCCGAGACAGCACGCTTaGCTTCTGGCTGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: GAGPAVGERVQCAQHEGHPRQHA*LLAGHR
Trigger: GCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGG...GTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GCCAGGATGACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGTGCAATGGACGGCAGTaGGGTCACGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARMTTQGTSSVSVKVGGRCNGRQ*GHGQQG
Trigger: TCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCA...CCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCATCCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPGSSRR*ACAVCS
Trigger: TGAGCACACTGCACACGCTCACCTACGGCTGGACCC...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CCTCTCCCAGCCTCTCCGGATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGCGCTTGGCTTCTGGCTaGTCACCGCAGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: PLPASPDPGESAADAGQERLASG*SPQMGT
Trigger: GGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCG...CTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCGGAGAGGCTGGGAGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp GGTCCAGAGCCCAGGGCAGGCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCCGGTGCTGTAGCCAGTaGTCCAGCCAGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPEPRAGTSYVARLLGQGRCCSQ*SSQSGK
Trigger: CTTCCCCGACTGGCTGGACCACTGGCTACAGCACCG...GCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTGCCCTGGGCTCTGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp GCCAGGATGACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGCTTCTGGCATTTTGGTaGCTCTGCGGCCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ARMTTQGTSSVSVKVGGRLLAFW*LCGPPL
Trigger: GAGCGGCGGGCCGCAGAGCCACCAAAATGCCAGAAG...CCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCATCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp CGGATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGAAACAGGGCTTTGGCCCCATGTCCACGGGCATaGAGCCCATGGCGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RILASLRLMQGRRNRALAPCPRA*SPWRAP
Trigger: TGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGG...GGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGCTCCACCTCCCAGGCTaGCGCCAGGGATCCCATGTC +
Preference number: 4 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGLHLPG*RQGSHV
Trigger: GACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAG...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGACGGCAGTGTGGTGTTaGCCACGGACACGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWTAVWC*PRTRAA
Trigger: AGCTGCCCGTGTCCGTGGTCAACACCACACTGCCGT...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCCTCCTGCTGCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCCCGCTACCCAGGATaGCCACTTTGGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: ASCCCPRWREETSRCSHAPRYPG*PLWGPH
Trigger: ATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGGGG...AGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCAGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCCAGGATGACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGCCGCAGATGGGCACCTaGCTGTTACCATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ARMTTQGTSSVSVKVGGRPQMGT*LLPSLG
Trigger: CCCAAGGGATGGTAACAGGCAGGTGCCCATCTGCGG...CCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCATCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp GCCAGGATGACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGCCGATCTGCTTGCGGTaGTGTAGCCAGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARMTTQGTSSVSVKVGGRPICLR*CSQWSS
Trigger: GCTGGACCACTGGCTACAGCACCGCAAGCAGATCGG...CCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTCATCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGAGCGCAGCTCTGGCCTaGTGCTTCCTGCTCGGGGAG +
Preference number: 4 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGSAALA*CFLLGE
Trigger: CTCCCCGAGCAGGAAGCAGCAGGCCAGAGCTGCGCT...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCAGCCCACCAGGCGTGTaGCCAGGGAGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPSPPGV*PGSGQS
Trigger: ACTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCT...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCCTGTTACCATCCCTTaGGCCAGCCTGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPPVTIP*ASLQGP
Trigger: TGGACCCTGCAGGCTGGCCCAAGGGATGGTAACAGG...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR CAA 72 bp GGGCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATaGGTGGGTCTCCATTGCCCATGCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GQAASTHRGWGS*VGLHCPCSPCL
Trigger: GAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGTCCCCACCACCACTTTaGAGCCAGAGCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGSPPPL*SQSPPG
Trigger: GCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGA...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGAAACAGGGCTTTGGCCAGCTCCACCTCCCAGGCTaGCGCCAGGGATCCCATGTC +
Preference number: 4 (lower is better)
Translates to: DPGESAADAGQEKQGFGQLHLPG*RQGSHV
Trigger: GACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAG...CTGGCCAAAGCCCTGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GAGCGTGAAGGTGGGAGGCAGGTAGAACTTGTAGCGGCTCTCCTCGAAGGCGCGGGGCTTTGGCCAGGATaGCGACGCAGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: EREGGRQVELVAALLEGAGLWPG*RRRAPA
Trigger: TGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCC...CGCGCCTTCGAGGAGAGCCGCTACAAGTTCTACCTGCCTCCCACCTTCACGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GCCTCCTGCTGCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTTGGCGAGTCTGCGGCTaGTGCAGGGCAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: ASCCCPRWREETSRCSHAWRVCG*CRAGET
Trigger: TGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCA...AGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTTGATGGTGCTCTCCCTCTCCCCCCGCTACCCAGGATaGCCACTTTGGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: SARAWSVGSVNLMVLSLSPRYPG*PLWGPH
Trigger: ATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGGGG...GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp CTCGAAGGCGCGGGTCCAGCCGTAGGTGAGCGTGTGCAGTGTGCTCAGCACGAGGAAACAGCCTGGCTGTaGGTTTGGGGTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LEGAGPAVGERVQCAQHEETAWL*VWGCGS
Trigger: GGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTC...CTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCCTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp TCCCAGCCTCTCCGGATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGAAACTCCCTTGGGCCAGCCTaGAGGGTCCAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SQPLRILASLRLMQGRRNSLGPA*RVQAEM
Trigger: CATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGA...GTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCGGAGAGGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATGCAGCTCTGGCCTGCTaGTTCCTGCTCGGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TSCGPGGALPSCALGQQHAALAC*FLLGEE
Trigger: TTCCTCCCCGAGCAGGAAGCAGCAGGCCAGAGCTGC...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCTCGCTGTCCACCAGGTaGAGGCTGATCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPSLSTR*RLISGL
Trigger: CAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGA...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTTGTCCCCACCACCACTTTaGAGCCAGAGCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: HTWLVFSARAWSVGSVNLSPPPL*SQSPPG
Trigger: GCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGA...CAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGTAGAACTTACGGCAGTGTGGTGTTaGCCACGGACACGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DDAGHQQREREGGRQVELTAVWC*PRTRAA
Trigger: AGCTGCCCGTGTCCGTGGTCAACACCACACTGCCGT...AAGTTCTACCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GCCTCCTGCTGCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTGCTCTGGAAAGGAGGTaGCGTCACTCTCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: ASCCCPRWREETSRCSHAALERR*RHSHRR
Trigger: CCTCCTGTGAGAGTGACGTCACCTCCTTTCCAGAGC...AGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCGAAACAGCCTGGCTGTaGGTTTGGGGTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPETAWL*VWGCGS
Trigger: GGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTC...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCTCCGGGGAGCTCACTaGCTCCTCTTGGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: RKPNGLRAPSLVCPGSRALRGAH*LLLESH
Trigger: GTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAG...GGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp TCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTTGATGGTGCTCTCCCTCTCCGCAGCCCGATCTGCTTaGGGTGCTGTAGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: SARAWSVGSVNLMVLSLSAARSA*GAVASG
Trigger: ACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGC...GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp GGCGCGGGTCCAGCCGTAGGTGAGCGTGTGCAGTGTGCTCAGCACGAGGGCCACTTGTTGGCCAAGACCTaGTTGACTGCCAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: GAGPAVGERVQCAQHEGHLLAKT*LTARLT
Trigger: GGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAACAA...GTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACCCGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATTCTGGGCAGAGCCGTTaGCTTCCCTCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: TSCGPGGALPSCALGQQHSGQSR*LPSPSE
Trigger: CTCTGAAGGGGAGGGAAGGCAACGGCTCTGCCCAGA...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCCTCATCGGGGACCTTaGCAAGGCTACTATCGCTGT +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPPHRGP*QGYYRC
Trigger: ACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGG...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCTCACTGCCTCCTCTTaGAAAGTCACTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPLTASS*KVTWAA
Trigger: AGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAG...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGCCTGTTACCATCCCTTaGGCCAGCCTGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGPVTIP*ASLQGP
Trigger: TGGACCCTGCAGGCTGGCCCAAGGGATGGTAACAGG...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGACACAGCCACAAAGATaGCCTCCGGGGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGTQPQR*PPGSSL
Trigger: CAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGT...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TCCCAGCCTCTCCGGATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGAAACACACAGCCACAAAGATaGCCTCCGGGGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SQPLRILASLRLMQGRRNTQPQR*PPGSSL
Trigger: CAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGT...GTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCGGAGAGGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCACTGAGACTGCACAGTaGAGAGTAGTGCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPTETAQ*RVVLPE
Trigger: TTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGT...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GGTCCAGCCGTAGGTGAGCGTGTGCAGTGTGCTCAGCACGAGGGCCACAAAGCCCCGCCAGCTGGTCACTaGGACTGCACAGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: GPAVGERVQCAQHEGHKAPPAGH*DCTVKS
Trigger: ACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGG...GGCTTTGTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCGGACACGGGCAGCTTaGAGAACTTGTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPRTRAA*RTCSGF
Trigger: AAAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCG...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCACGGCAGTGTGGTGTTaGCCACGGACACGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPTAVWC*PRTRAA
Trigger: AGCTGCCCGTGTCCGTGGTCAACACCACACTGCCGT...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCGGCAGGGCTCAACTCTaGCGCCCGGGGAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPGRAQL*RPGSFT
Trigger: AGTAAAGCTCCCCGGGCGTCAGAGTTGAGCCCTGCC...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GAGCGTGAAGGTGGGAGGCAGGTAGAACTTGTAGCGGCTCTCCTCGAAGGCGCGCTGAGCAGCCCGATCTaGTTGCGGTGCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: EREGGRQVELVAALLEGALSSPI*LRCCSQ
Trigger: CTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAG...CGCGCCTTCGAGGAGAGCCGCTACAAGTTCTACCTGCCTCCCACCTTCACGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGTGCTTGGTTGGAGAGTaGACTGAGAGAGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWCLVGE*TERAQL
Trigger: GAGCTGCGCTCTCTCAGTGCACTCTCCAACCAAGCA...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp AGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCTCATCGGGGACCTTaGCAAGGCTACTATCGCTGT +
Preference number: 4 (lower is better)
Translates to: RKPNGLRAPSLVCPGSRAPHRGP*QGYYRC
Trigger: ACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGG...GGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGCCTCATCGGGGACCTTaGCAAGGCTACTATCGCTGT +
Preference number: 4 (lower is better)
Translates to: APHTWLVFSARAWSVGSVPHRGP*QGYYRC
Trigger: ACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGG...CACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp CCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACCTGAGGGAAACAGCCTaGCTGTGCGTTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: PHTWLVFSARAWSVGSVNLRETA*LCVWGC
Trigger: GCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAG...GTTCACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCCCGAGACAGCACGCTTaGCTTCTGGCTGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPPRQHA*LLAGHR
Trigger: GCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGG...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGCACATGCTCCAGGGATaGCTCTGGGCAGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGHMLQG*LWAEPL
Trigger: CAACGGCTCTGCCCAGAGCCATCCCTGGAGCATGTG...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GGTCCAGAGCCCAGGGCAGGCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGATGACCATATGGGGTaGACACAGGCACAAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GPEPRAGTSYVARLLGQGDDHMG*TQAQVS
Trigger: GCTCACTTGTGCCTGTGTCCACCCCATATGGTCATC...GCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTGCCCTGGGCTCTGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGAGCGACCGCGGCAGCTaGAGGTCCGCGGCGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWSDRGS*RSAAKA
Trigger: CGCCTTCGCCGCGGACCTTCAGCTGCCGCGGTCGCT...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCTCGACAGCCTCACCGTaGGGTGAGCCACCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPSTASP*GEPPFL
Trigger: CAGAAAGGGTGGCTCACCTCACGGTGAGGCTGTCGA...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCCAGGCCTCCTGCTGCTaGCCCAGGTGGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPQASCC*PRWREE
Trigger: CTCTTCCCTCCACCTGGGGCAGCAGCAGGAGGCCTG...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGCAGATGGAAAATACCTaGAGGAAGAGCTTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWQMENT*RKSFPG
Trigger: GCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTG...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGTCTTGGAAAGTCACTTaGGCCGCTGAGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWSWKVT*AAEGNS
Trigger: GCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGA...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGGCTGGTCACCGCAGATaGGCACCTGCCTGTTACCAT +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGAGHRR*APACYH
Trigger: ATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGC...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGAGGGAGCAGCAAGGATaGCCTGTGACTGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGREQQG*PVTGGQ
Trigger: CTGTCCTCCAGTCACAGGCCATCCTTGCTGCTCCCT...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCTCTCTTCTGGCATTTTaGTGGCAACAGCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPSLLAF*WQQQAG
Trigger: ACCAGCCTGCTGTTGCCACCAAAATGCCAGAAGAGA...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCCCGCCAGCTGGTCACTaGGACTGCACAGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPPPAGH*DCTVKS
Trigger: ACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGG...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGCCATGTCCACGGGCATaGAGCCCATGGCGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLPCPRA*SPWRAP
Trigger: TGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGG...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGCTCCACCTCCCAGGCTaGCGCCAGGGATCCCATGTC +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLLHLPG*RQGSHV
Trigger: GACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAG...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCTCCAGGCCGACTGCCTaGTTTTCCTCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPSRPTA*FSSSPG
Trigger: GCCTGGGGAGGAGGAAAATCAGGCAGTCGGCCTGGA...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCCTGGACCGGGAGTGGTaGCTGATGCTTGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPLDREW*LMLGWR
Trigger: TCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAG...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR TCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCGACATCCGGCTGACGTaGGGGTCTGAGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPDIRLT*GSEALR
Trigger: CCTGAGAGCCTCAGACCCTCACGTCAGCCGGATGTC...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGGGTGCGACATCCGGCTaGCGTGAGGGTCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLGATSG*REGLRL
Trigger: GAGCCTCAGACCCTCACGTCAGCCGGATGTCGCACC...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCTTGGTGGGTCTCCATTaGCCATGCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPLVGLH*PCSPCL
Trigger: GAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAA...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CACCGGGCAAAGGACCAGGCACAGACTCCAGGCCGACTGCCTGATTTTCCTCCTTTGGTGGGTCTCCATTaGCCATGCTCTCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HRAKDQAQTPGRLPDFPPLVGLH*PCSPCL
Trigger: GAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAA...AGGAGGAAAATCAGGCAGTCGGCCTGGAGTCTGTGCCTGGTCCTTTGCCCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGTCTTGCACAGCCAGCTaGCTCCCGCAGCCTGCACGC +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLSCTAS*LPQPAR
Trigger: GCGTGCAGGCTGCGGGAGGCAGCTGGCTGTGCAAGA...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGTGGCATTTTGGTGGCTaGGTGTGTTGGCACGTGCCT +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGWHFGG*VCWHVP
Trigger: AGGCACGTGCCAACACACCCAGCCACCAAAATGCCA...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGCCTGGCTGTGCGTTTaGGGTTGCGGCTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLAWLCV*GCGSPP
Trigger: TGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGC...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGGGAGGCGCAGGGGCATaGCCTCCACCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGGGAGA*PPPPRL
Trigger: CAGCCTGGGAGGTGGAGGCCATGCCCCTGCGCCTCC...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGGCTCTGCAAGAGCCTTaGGGAAGTAGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWALQEP*GSSKRE
Trigger: TTCCCTTTTGCTACTTCCCCAAGGCTCTTGCAGAGC...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGGGTGAGAAGGCACAGTaGTTTAAAGGACGCTCATCG +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWGEKAQ*FKGRSS
Trigger: CGATGAGCGTCCTTTAAACCACTGTGCCTTCTCACC...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCTGCAATGGACGGCAGTaGGGTCACGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLCNGRQ*GHGQQG
Trigger: TCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCA...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGAGCGCTGGTACTTGGTaGCGCGCCGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGSAGTW*RAAAAG
Trigger: CCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCT...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGCCGATCTGCTTGCGGTaGTGTAGCCAGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVPICLR*CSQWSS
Trigger: GCTGGACCACTGGCTACAGCACCGCAAGCAGATCGG...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAGATGGAAAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGCAGCCCGATCTGCTTaGGGTGCTGTAGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: ADGKYLQEELPRHGLPCIAARSA*GAVASG
Trigger: ACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGC...GATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCCTGTGGCCCCGGCGGTaGTCTTCCCTCTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPLWPRR*SSLLCF
Trigger: AAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAG...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCGTGGTCTGTGGGCAGCGTGAACTTGATGGTGCTCTCCCTCTCCCAGCCTCTCACTCAAAAGCCAGCATaGCACTGTTGGCTGCACGCA +
Preference number: 4 (lower is better)
Translates to: AWSVGSVNLMVLSLSQPLTQKPA*HCWLHA
Trigger: TGCGTGCAGCCAACAGTGGCATGCTGGCTTTTGAGT...GAGAGGCTGGGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp CATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTTGTCTTGGAAAGTCACTTaGGCCGCTGAGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: HTWLVFSARAWSVGSVNLSWKVT*AAEGNS
Trigger: GCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGA...CAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATCCAGGTACTCAGCATTaGACTCACGATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TSCGPGGALPSCALGQQHPGTQH*THDAEG
Trigger: ACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGG...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGTTAGTAGGGAATCGATaGGCCCTTGTTATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWLVGNR*ALVMPR
Trigger: CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAA...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGGGGCAAGTACACGAGTaGCAGCAGCACGTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLGQVHE*QQHVGH
Trigger: GTGGCCTACGTGCTGCTGTCACTCGTGTACTTGCCC...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCCCCACTCAGCAAGGATaGGGTGGAGCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: RWHLFPPATHLIIASLLSPTQQG*GGAASA
Trigger: GGCTGAAGCTGCTCCACCTCATCCTTGCTGAGTGGG...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGGGCAGGGCTCAACTCTaGCGCCCGGGGAGCTTTACT +
Preference number: 4 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRGRAQL*RPGSFT
Trigger: AGTAAAGCTCCCCGGGCGTCAGAGTTGAGCCCTGCC...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCTCAGGACTGACTTCGTaGAGACAGTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPSGLTS*RQSFSP
Trigger: TGGGCTGAAGGACTGTCTTCACGAAGTCAGTCCTGA...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGTCCAGAGCATGTCGTTaGGGCACTTTTGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGSRACR*GTFVPR
Trigger: TCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGA...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGAGCCTCACCGTGAGGTaGGCCACCCTTTCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLSLTVR*ATLSGS
Trigger: TGAGCCAGAAAGGGTGGCTCACCTCACGGTGAGGCT...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCCCGCAGATGGGCACCTaGCTGTTACCATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLPQMGT*LLPSLG
Trigger: CCCAAGGGATGGTAACAGGCAGGTGCCCATCTGCGG...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGCCGCAGATGGGCACCTaGCTGTTACCATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLPQMGT*LLPSLG
Trigger: CCCAAGGGATGGTAACAGGCAGGTGCCCATCTGCGG...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGGTTTTCTGGGTCCTCTaGCAGAGGACATTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGVFWVL*QRTFGV
Trigger: GACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAAC...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCAGTGGGCTCTTCTCCTaGTTTTCACTGAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPSGLFS*FSLKNP
Trigger: AGGGTTCTTCAGTGAAAAGCAGGAGAAGAGCCCACT...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCGCTGGTCACCGCAGATaGGCACCTGCCTGTTACCAT +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPAGHRR*APACYH
Trigger: ATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGC...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGGGAAGCGCTGGTACTTaGTGCCGCGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWGSAGT*CRAAAA
Trigger: TGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCC...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCCAGGCACCTCATACGTaGCTCGTCTTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLQAPHT*LVFSAR
Trigger: CCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTG...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGGAGCTATCCTTGCAGTaGGCTCTTCTCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGELSLQ*ALLLLF
Trigger: GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTC...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTCCATGTCCACGGGCATaGAGCCCATGGCGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: PVWFSGSSARGHLESPIFPCPRA*SPWRAP
Trigger: TGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGG...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCGGGCTTTGGCCAGGATaGCGACGCAGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFGLWPG*RRRAPA
Trigger: TGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCC...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCCTGCCAGTAGCCTGGTaGGGTAGGGAAGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: RWHLFPPATHLIIASLLSLPVAW*GREDSS
Trigger: ACTGCTGTCTTCCCTACCTCACCAGGCTACTGGCAG...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCACCGGGAGTGGTGACTaGTGCTTGGTTGGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLTGSGD*CLVGEC
Trigger: GCACTCTCCAACCAAGCATCAGTCACCACTCCCGGT...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGCCGCAGATGGGCACCTaGCTGTTACCATCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRPQMGT*LLPSLG
Trigger: CCCAAGGGATGGTAACAGGCAGGTGCCCATCTGCGG...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGCCTCATCGGGGACCTTaGCAAGGCTACTATCGCTGT +
Preference number: 4 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVPHRGP*QGYYRC
Trigger: ACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGG...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGGCCTGGCTGTGCGTTTaGGGTTGCGGCTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPAWLCV*GCGSPP
Trigger: TGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGC...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGCCTGTTACCATCCCTTaGGCCAGCCTGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRPVTIP*ASLQGP
Trigger: TGGACCCTGCAGGCTGGCCCAAGGGATGGTAACAGG...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGCTGGTCACCGCAGATaGGCACCTGCCTGTTACCAT +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLAGHRR*APACYH
Trigger: ATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGC...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTGGAAGCGCTGGTACTTaGTGCCGCGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PVWFSGSSARGHLESPIFGSAGT*CRAAAA
Trigger: TGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCC...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGCGGTGCTGTAGCCAGTaGTCCAGCCAGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWRCCSQ*SSQSGK
Trigger: CTTCCCCGACTGGCTGGACCACTGGCTACAGCACCG...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCAGGGAGCAGCAAGGATaGCCTGTGACTGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLREQQG*PVTGGQ
Trigger: CTGTCCTCCAGTCACAGGCCATCCTTGCTGCTCCCT...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCCTGGGCAGCCTTCACTaGCCCTACTCTCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLLGSLH*PYSLPS
Trigger: GGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAG...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCAGTACCCACCGGGGTTaGGGATCATTGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLSTHRG*GSLVGL
Trigger: GAGACCCACCAATGATCCCCAACCCCGGTGGGTACT...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCCTGCACGCCAGCTCTTaGCCACAGGGGCTGGACCGG +
Preference number: 4 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTLHASS*PQGLDR
Trigger: CCGGTCCAGCCCCTGTGGCCAAGAGCTGGCGTGCAG...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATGTGGCAACAGCAGGCTaGTGCGACATCCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDVATAG*CDIRLT
Trigger: CGTCAGCCGGATGTCGCACCAGCCTGCTGTTGCCAC...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
3UTR CAA 72 bp TACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATaGCCCATGCTCTCCCTGCCTCTCATTAGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: YPPGLGIIGGSP*PMLSLPLISRE
Trigger: TTCCCTACTAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGTCCCCACCACCACTTTaGAGCCAGAGCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALSPPPL*SQSPPG
Trigger: GCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGA...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGAGTCACTTGGGCCGCTaGGGGAAACAGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGSHLGR*GKQPGC
Trigger: ACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACT...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGCGGCGCAGAAGAAGCTaGGCAGCCCGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GKEITLVPKPGSLMALERRRRRS*AARSAC
Trigger: GCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCG...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFGSSRR*ACAVCS
Trigger: TGAGCACACTGCACACGCTCACCTACGGCTGGACCC...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACG +
Preference number: 4 (lower is better)
Translates to: RKPNGLRAPSLVCPGSRANVTIA*SALLLT
Trigger: CGTTAAGAGAAGAGCAGATCATGCTATTGTGACATT...GGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATCGCCTGCCTTTCGTGTaGTTGTCCAGCAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDRLPFV*LSSRWH
Trigger: GTGCCACCTGCTGGACAATCACACGAAAGGCAGGCG...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCGGTTGGAGAGTGCACTaGGAGAGCGCAGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFGWRVH*ESAALA
Trigger: GGCCAGAGCTGCGCTCTCTCAGTGCACTCTCCAACC...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR TCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCGCCTGGCTTTGGTTCTaGCTCTCGGTTTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RWHLFPPATHLIIASLLSAWLWF*LSVSQE
Trigger: CTCCTGAGAAACCGAGAGTCAGAACCAAAGCCAGGC...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATGAAACAGCCTGGCTGTaGGTTTGGGGTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDETAWL*VWGCGS
Trigger: GGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTC...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCCGCTTGGCTTCTGGCTaGTCACCGCAGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFRLASG*SPQMGT
Trigger: GGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCG...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGAGGCGCAGGGGCATaGCCTCCACCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSGGAGA*PPPPRL
Trigger: CAGCCTGGGAGGTGGAGGCCATGCCCCTGCGCCTCC...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCAGGACAGACGTCCTGTaGCCCCGGCGGTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTRTDVL*PRRCSS
Trigger: GGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCT...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CACCGGGCAAAGGACCAGGCACAGACTCCAGGCCGACTGCCTGATTTTCCTCCTCCTTGGCACAGCAGATaGAAAATACCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HRAKDQAQTPGRLPDFPPPWHSR*KIPAGR
Trigger: TCTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGG...AGGAGGAAAATCAGGCAGTCGGCCTGGAGTCTGTGCCTGGTCCTTTGCCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGGGGCTTTGGCCAGGATaGCGACGCAGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLGLWPG*RRRAPA
Trigger: TGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCC...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCGCCTGCCTTTCGTGTaGTTGTCCAGCAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALRLPFV*LSSRWH
Trigger: GTGCCACCTGCTGGACAATCACACGAAAGGCAGGCG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCCTTTGCTACAGGAACTaGGGTGGGACGACCAGTAGA +
Preference number: 4 (lower is better)
Translates to: RWHLFPPATHLIIASLLSLCYRN*GGTTSR
Trigger: TCTACTGGTCGTCCCACCTCAGTTCCTGTAGCAAAG...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAAATCGCTTGAACCTCTaGGGCCCGCCGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRANRLNL*GPPLGA
Trigger: CGCTCCGAGCGGCGGGCCGCAGAGGTTCAAGCGATT...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS-3UTR GCA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGCTGAGCAGCCCGATCTaGTTGCGGTGCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKEITLVPKPGSLMALERLSSPI*LRCCSQ
Trigger: CTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAG...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGTAGAACTTCACAATAGCATGATCTaGTCTTCTCTTAACGTACGG +
Preference number: 4 (lower is better)
Translates to: DDAGHQQREREGGRQVELHNSMI*SSLNVR
Trigger: CCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG...AAGTTCTACCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCTGTGGCCCCGGCGGTaGTCTTCCCTCTTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALLWPRR*SSLLCF
Trigger: AAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCCTAATGAGCTATCCTTaGAGTGGGCTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPLMSYP*SGLFSC
Trigger: GCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAG...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGTATGAGACAAGTTTCTaGCGCTCAGCCTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVYETSF*RSALAQ
Trigger: CTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATA...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCTGGCCTGCTGCTTCCTaGTCGGGGAGGAAACCTCAC +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFWPAAS*SGRKPH
Trigger: GTGAGGTTTCCTCCCCGAGCAGGAAGCAGCAGGCCA...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGCTTGTCCATCTCTTCTaGCATTTTGGTGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVLVHLF*HFGGWV
Trigger: CACCCAGCCACCAAAATGCCAGAAGAGATGGACAAG...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS-3UTR CCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAAGCCCACCAGGCGTGTaGCCAGGGAGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRASPPGV*PGSGQS
Trigger: ACTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCT...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGAGCCCACCAGGCGTGTaGCCAGGGAGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLSPPGV*PGSGQS
Trigger: ACTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCT...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTCGCTTGGCTTCTGGCTaGTCACCGCAGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGIRLASG*SPQMGT
Trigger: GGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCG...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTGGAGGCGCAGGGGCATaGCCTCCACCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVGGAGA*PPPPRL
Trigger: CAGCCTGGGAGGTGGAGGCCATGCCCCTGCGCCTCC...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGCCTTCCATCAGAAGATaGCTTTGGGCCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLPSIRR*LWAQET
Trigger: AGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGG...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCAGATGGAAAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGAGCTATCCTTGCAGTaGGCTCTTCTCCTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ADGKYLQEELPRHGLPCIELSLQ*ALLLLF
Trigger: GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTC...GATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTAGAGCTTCCCCGGCATaGCCTTCCCTGCATCGGTCA +
Preference number: 4 (lower is better)
Translates to: PVWFSGSSARGHLESPIFRASPA*PSLHRS
Trigger: TGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCT...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CACCGGGCAAAGGACCAGGCACAGACTCCAGGCCGACTGCCTGATTTTCCTCCTATCAACCTCAGACTGTaGCATTTGGGATTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HRAKDQAQTPGRLPDFPPINLRL*HLGFPE
Trigger: CTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGAT...AGGAGGAAAATCAGGCAGTCGGCCTGGAGTCTGTGCCTGGTCCTTTGCCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCCTCCACCTCCCAGGCTaGCGCCAGGGATCCCATGTC +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTLHLPG*RQGSHV
Trigger: GACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAG...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAACGGCAGTGTGGTGTTaGCCACGGACACGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRATAVWC*PRTRAA
Trigger: AGCTGCCCGTGTCCGTGGTCAACACCACACTGCCGT...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGGGCCCAGGAGACTCATaGAGACCTCACCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWGPGDS*RPHPLC
Trigger: ACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCC...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCTCTCCTGCTTTTCACTaGAGAACCCTTATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPSPAFH*RTLMCC
Trigger: GCAGCACATAAGGGTTCTTCAGTGAAAAGCAGGAGA...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTGCAGCCCGATCTGCTTaGGGTGCTGTAGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGIAARSA*GAVASG
Trigger: ACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGC...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGTGCTCTTCCCTCTTGTaGTTTGGGGCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLCSSLL*FGAAAF
Trigger: AAATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCA...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGGCTGTGGAGATGATGTaGTCTCGGGATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALAVEMM*SRDAAA
Trigger: GGCAGCAGCATCCCGAGAGCACATCATCTCCACAGC...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAGCCCTGCCAGGGTCTTaGACAGCCAGCTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRALPGS*TASCLP
Trigger: CGGGAGGCAGCTGGCTGTGCAAGACCCTGGCAGGGC...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCGCCTGGCTGTGCGTTTaGGGTTGCGGCTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLAWLCV*GCGSPP
Trigger: TGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGC...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCCTGAGGGAAACAGCCTaGCTGTGCGTTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFLRETA*LCVWGC
Trigger: GCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAG...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGAGACAGCACGCTTaGCTTCTGGCTGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRAPRQHA*LLAGHR
Trigger: GCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGG...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAGGAGGCGCAGGGGCATaGCCTCCACCTCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIGGAGA*PPPPRL
Trigger: CAGCCTGGGAGGTGGAGGCCATGCCCCTGCGCCTCC...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAACAGTCGGGGAAGCGCTaGTACTTGGTGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: IWTSNLLFAHSYTTLHHQQSGKR*YLVPRR
Trigger: GCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTG...TTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GTTGGAGCCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCATCAGAAGATGGCTTTaGGCCCAGGAGACTCATGAA +
Preference number: 4 (lower is better)
Translates to: VGASVVFWVLCQRTFGVPIRRWL*AQETHE
Trigger: TTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGAT...GGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGCTCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGGTTGGGGATCATTGGTaGGTCTCCATTGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRVGDHW*VSIAHA
Trigger: AGCATGGGCAATGGAGACCCACCAATGATCCCCAAC...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCCTTGTCCATCTCTTCTaGCATTTTGGTGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLLVHLF*HFGGSA
Trigger: CGCAGAGCCACCAAAATGCCAGAAGAGATGGACAAG...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR TCA 90 bp AGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCATGCTCTCCCAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACG +
Preference number: 4 (lower is better)
Translates to: STHRGWGSLVGLHCPCSPNVTIA*SALLLT
Trigger: CGTTAAGAGAAGAGCAGATCATGCTATTGTGACATT...GGGAGAGCATGGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGAAGTGTAATGCCCCATaGGGAGGAAGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGKCNAP*GGSWSQ
Trigger: CTGGCTCCAACTTCCTCCTCATGGGGCATTACACTT...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGTCTGTGGGCCACAGCTaGTGCTCCATCAGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALSVGHS*CSISAN
Trigger: ATTGGCACTGATGGAGCATCAGCTGTGGCCCACAGA...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGGGCCACAAAGCCCAGTaGGGACTCAAAAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPGHKAQ*GLKSQH
Trigger: ATGCTGGCTTTTGAGTCCTCACTGGGCTTTGTGGCC...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAAGCGCTGGTACTTGGTaGCGCGCCGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVISAGTW*RAAAAG
Trigger: CCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCT...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGCAAGACCTGCTTGACTaGCAGGTTGACCAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGQDLLD*QVDQVV
Trigger: TACGACCTGGTCAACCTGGCAGTCAAGCAGGTCTTG...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GAGCGTGAAGGTGGGAGGCAGGTAGAACTTGTAGCGGCTCTCCTCGAAGGCGCGCTCAAACCTCCTATTTaGACACAGTTATACCACTTT +
Preference number: 4 (lower is better)
Translates to: EREGGRQVELVAALLEGALKPPI*TQLYHF
Trigger: AAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAG...CGCGCCTTCGAGGAGAGCCGCTACAAGTTCTACCTGCCTCCCACCTTCACGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCGAAGAGACCAGCCGCTaGTCACATGCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTEETSR*SHAPGM
Trigger: CATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTC...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCGGCATGGCCTTCCCTaGATCGGTCATGTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALRHGLP*IGHVPN
Trigger: ATTAGGCACATGACCGATGCAGGGAAGGCCATGCCG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAGATGGAAAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGATGGGCCCTTGTTATaGCAAGGCAATGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: ADGKYLQEELPRHGLPCIDGPLL*QGNAKI
Trigger: GATTTTAGCATTGCCTTGGCATAACAAGGGCCCATC...GATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGAGTACACAGCCCGCCTaGCTTTCGTGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWSTQPA*LSCDCP
Trigger: TGGACAATCACACGAAAGGCAGGCGGGCTGTGTACT...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGCATTTTGGTGGCTCTaGGGCCCGCCGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTAFWWL*GPPLGA
Trigger: CGCTCCGAGCGGCGGGCCGCAGAGCCACCAAAATGC...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR GCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGGCATTTTGGTGGCTCTaGGGCCCGCCGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGAFWWL*GPPLGA
Trigger: CGCTCCGAGCGGCGGGCCGCAGAGCCACCAAAATGC...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR GCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACTGCCTCCCGCAGCCTaGACGCCAGCTCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVILPPAA*TPALGH
Trigger: GTGGCCAAGAGCTGGCGTGCAGGCTGCGGGAGGCAG...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTCTGAGGGAAACAGCCTaGCTGTGCGTTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGILRETA*LCVWGC
Trigger: GCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAG...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGTCTTGGAAAGTCACTTaGGCCGCTGAGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGSWKVT*AAEGNS
Trigger: GCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGA...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCAGTCGGGGAAGCGCTaGTACTTGGTGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGQSGKR*YLVPRR
Trigger: GCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTG...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCGGTGCTGTAGCCAGTaGTCCAGCCAGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLRCCSQ*SSQSGK
Trigger: CTTCCCCGACTGGCTGGACCACTGGCTACAGCACCG...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGGCCAGTGTGGTTTTCTaGGTCCTCTGCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: GKEITLVPKPGSLMALERASVVF*VLCQRT
Trigger: TGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGC...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAGGTTCTGCAGAGGGTTaGGGGCTCAGCCGAGAACAC +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRAGSAEG*GLSREH
Trigger: GTGTTCTCGGCTGAGCCCCCAACCCTCTGCAGAACC...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCTTAGTAGGGAATCGATaGGCCCTTGTTATGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RWHLFPPATHLIIASLLSLVGNR*ALVMPR
Trigger: CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAA...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGGAGAGAGCGCAGCTCTaGCCTGCTGCTTCCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLERAQL*PAASCS
Trigger: CGAGCAGGAAGCAGCAGGCCAGAGCTGCGCTCTCTC...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR TCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTCCATGTCCACGGGCATaGAGCCCATGGCGAGCGCCA +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPPCPRA*SPWRAP
Trigger: TGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGG...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTCGGCGCAGAAGAAGCTaGGCAGCCCGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVRRRRS*AARSAC
Trigger: GCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCG...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGATGCAATGGACGGCAGTaGGGTCACGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRCNGRQ*GHGQQG
Trigger: TCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCA...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKGSSRR*ACAVCS
Trigger: TGAGCACACTGCACACGCTCACCTACGGCTGGACCC...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGGCTTTGGCCAGGATaGCGACGCAGGGCACCAGCA +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTGLWPG*RRRAPA
Trigger: TGCTGGTGCCCTGCGTCGTCATCCTGGCCAAAGCCC...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTAAGTGTAATGCCCCATaGGGAGGAAGTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: PVWFSGSSARGHLESPIFKCNAP*GGSWSQ
Trigger: CTGGCTCCAACTTCCTCCTCATGGGGCATTACACTT...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAGCCTCATCTGTaGCATTCTCTCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSGQPHL*HSLWAA
Trigger: GGCTGCCCAGAGAGAATGTCACAGATGAGGCTGCCC...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGGCTGACGTGAGGGTCTaGGGCTCTCAGGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLADVRV*GSQVTR
Trigger: TCGAGTGACCTGAGAGCCTCAGACCCTCACGTCAGC...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR GCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCCCCGCTACCCAGGATaGCCACTTTGGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYPRYPG*PLWGPH
Trigger: ATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGGGG...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCGAAACAGCCTGGCTGTaGGTTTGGGGTTGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLETAWL*VWGCGS
Trigger: GGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTC...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTTCCCTTGGGCCAGCCTaGAGGGTCCAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVSLGPA*RVQAEM
Trigger: CATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGA...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGCACCGTCCCTCGTGTaGCCGGGGTCCAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVAPSLV*PGSRAQ
Trigger: CTGGGCTCTGGACCCCGGGCACACGAGGGACGGTGC...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGCAGGCCTCCTGCTGCTaGCCCAGGTGGAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTQASCC*PRWREE
Trigger: CTCTTCCCTCCACCTGGGGCAGCAGCAGGAGGCCTG...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTCAGATGGAAAATACCTaGAGGAAGAGCTTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: PVWFSGSSARGHLESPIFQMENT*RKSFPG
Trigger: GCCGGGGAAGCTCTTCCTGCAGGTATTTTCCATCTG...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGAATCTCTGCTTTACCTaGCCCCTTCTCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWNLCFT*PLLSKA
Trigger: AGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATT...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ATTTACCAGGCTGTGGAGATGATGTGCTCTCGGGATGCTGCTGCCAGTAGCCTGGATGGGCCCTTGTTATaGCAAGGCAATGCTAAAATC +
Preference number: 4 (lower is better)
Translates to: IYQAVEMMCSRDAAASSLDGPLL*QGNAKI
Trigger: GATTTTAGCATTGCCTTGGCATAACAAGGGCCCATC...CAGGCTACTGGCAGCAGCATCCCGAGAGCACATCATCTCCACAGCCTGGTAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGGGTCTCCATTGCCCATaGTCTCCCTGCCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPGLHCP*SPCLSL
Trigger: TAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACC...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCCTGGGTTCTGCTATGTaGCAGCATCTTTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: RWHLFPPATHLIIASLLSLGSAM*QHLWYK
Trigger: CTTATACCAAAGATGCTGGCACATAGCAGAACCCAG...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAAGCCCACCAGGCGTGTaGCCAGGGAGCGGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVISPPGV*PGSGQS
Trigger: ACTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCT...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGCCAGGTACTCAGCATTaGACTCACGATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LSREHLFLHRGSKLESVGPGTQH*THDAEG
Trigger: ACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGG...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTGGAAGCGCTGGTACTTaGTGCCGCGCCGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPGSAGT*CRAAAA
Trigger: TGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCC...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAACAGTCGGGGAAGCGCTaGTACTTGGTGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKQSGKR*YLVPRR
Trigger: GCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTG...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTCGGTGCTGTAGCCAGTaGTCCAGCCAGTCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVRCCSQ*SSQSGK
Trigger: CTTCCCCGACTGGCTGGACCACTGGCTACAGCACCG...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTCTCCAGGGATGGCTCTaGGCAGAGCCGTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVLQGWL*AEPLPS
Trigger: GGAAGGCAACGGCTCTGCCCAGAGCCATCCCTGGAG...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTTGCTGCTGCCCCAGGTaGAGGGAAGAGACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPCCCPR*REETSR
Trigger: GCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCA...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATGGTGAGAAGGCACAGTaGTTTAAAGGACGCTCATCG +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDGEKAQ*FKGRSS
Trigger: CGATGAGCGTCCTTTAAACCACTGTGCCTTCTCACC...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAAGAGCTTCCCCGGCATaGCCTTCCCTGCATCGGTCA +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSRASPA*PSLHRS
Trigger: TGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCT...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCGGGGAGGACGTGCACTaGGTTCTGCTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTGEDVH*VLLCAS
Trigger: GCTGGCACATAGCAGAACCCAGTGCACGTCCTCCCC...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCTTCTGGCATTTTGGTaGCTCTGCGGCCCGCCGCTC +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYLLAFW*LCGPPL
Trigger: GAGCGGCGGGCCGCAGAGCCACCAAAATGCCAGAAG...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR TCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCCCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLPPGGG*SVACPS
Trigger: AGATGGACAAGCCACTGATCAGCCTCCACCTGGTGG...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGTCCCCACCACCACTTTaGAGCCAGAGCCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGSPPPL*SQSPPG
Trigger: GCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGA...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGGGCAAGTACACGAGTaGCAGCAGCACGTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKGQVHE*QQHVGH
Trigger: GTGGCCTACGTGCTGCTGTCACTCGTGTACTTGCCC...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGCGGCGCAGAAGAAGCTaGGCAGCCCGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTRRRRS*AARSAC
Trigger: GCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCG...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGATGCAATGGACGGCAGTaGGGTCACGGCCAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRCNGRQ*GHGQQG
Trigger: TCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCA...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGGGGTCCAGCCGTAGGTaGGCGTGTGCAGTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGGSSRR*ACAVCS
Trigger: TGAGCACACTGCACACGCTCACCTACGGCTGGACCC...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAATGGCGAGTCTGCGGCTaGTGCAGGGCAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: IWTSNLLFAHSYTTLHHQWRVCG*CRAGET
Trigger: TGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCA...TTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGTCTGTGGGCCACAGCTaGTGCTCCATCAGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLSVGHS*CSISAN
Trigger: ATTGGCACTGATGGAGCATCAGCTGTGGCCCACAGA...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCCTGCCAGTAGCCTGGTaGGGTAGGGAAGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTLPVAW*GREDSS
Trigger: ACTGCTGTCTTCCCTACCTCACCAGGCTACTGGCAG...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCCTCCGGGGAGCTCACTaGCTCCTCTTGGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLLRGAH*LLLESH
Trigger: GTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAG...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCACTCCGGGGAGCTCACTaGCTCCTCTTGGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSLRGAH*LLLESH
Trigger: GTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAG...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATATCCCTTGGGCCAGCCTaGAGGGTCCAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVISLGPA*RVQAEM
Trigger: CATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGA...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTAGCGCTGGTACTTGGTaGCGCGCCGCAGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVSAGTW*RAAAAG
Trigger: CCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCT...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGCAGCCCGATCTGCTTaGGGTGCTGTAGCCAGTGGT +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKAARSA*GAVASG
Trigger: ACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGC...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAACTGAGCAGCCCGATCTaGTTGCGGTGCTGTAGCCAG +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKLSSPI*LRCCSQ
Trigger: CTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAG...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGGCTGTGGAGATGATGTaGTCTCGGGATGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LDINLRLWHLGFPEHVVEAVEMM*SRDAAA
Trigger: GGCAGCAGCATCCCGAGAGCACATCATCTCCACAGC...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCATCGCTGTCCACCAGGTaGAGGCTGATCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSSLSTR*RLISGL
Trigger: CAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGA...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCCTGAGGGAAACAGCCTaGCTGTGCGTTTGGGGTTGC +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTLRETA*LCVWGC
Trigger: GCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAG...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATTGCTCTAGGCCTTCCTaGGAGTCATTCAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDCSRPS*ESFKLK
Trigger: CTTCAGTTTGAATGACTCCCAGGAAGGCCTAGAGCA...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTAAGTTGGAGCCAGTGTaGTTTTCTGGGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGIKLEPV*FSGSSA
Trigger: GGCAGAGGACCCAGAAAACCACACTGGCTCCAACTT...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGGGGGTTGGGGATCATTaGTGGGTCTCCATTGCCCAT +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLGVGDH*WVSIAH
Trigger: ATGGGCAATGGAGACCCACCAATGATCCCCAACCCC...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGTCAGACTGTGGCATTTaGGATTTCCAGAGCATGTCG +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWSDCGI*DFQSMS
Trigger: CGACATGCTCTGGAAATCCCAAATGCCACAGTCTGA...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAATCTCTTCTGGCATTTTaGTGGCTCTGCGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IWTSNLLFAHSYTTLHHQSLLAF*WLCGPP
Trigger: CGGCGGGCCGCAGAGCCACCAAAATGCCAGAAGAGA...TTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR CCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCGTGGTGACTGATGCTTaGTTGGAGAGTGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFVVTDA*LESALR
Trigger: TCTCAGTGCACTCTCCAACCAAGCATCAGTCACCAC...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
3UTR CAA 72 bp CTTCCCTGCATCGGTCATGTGCCTAATGAGCTATCCTaGCAGTGGGCTCTTCTCCTGCTTTTCACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: LPCIGHVPNELS*QWALLLLFTEE
Trigger: TTCTTCAGTGAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGATGCAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAACCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: IWTSNLLFAHSYTTLHHQPPGGG*SVACPS
Trigger: AGATGGACAAGCCACTGATCAGCCTCCACCTGGTGG...TTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYPPGGG*SVACPS
Trigger: AGATGGACAAGCCACTGATCAGCCTCCACCTGGTGG...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAACCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKPPGGG*SVACPS
Trigger: AGATGGACAAGCCACTGATCAGCCTCCACCTGGTGG...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGAGTCACTTGGGCCGCTaGGGGAAACAGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTSHLGR*GKQPGC
Trigger: ACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACT...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGACCGCCAGCTGGTCACTaGGACTGCACAGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRPPAGH*DCTVKS
Trigger: ACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGG...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCGGCGCAGAAGAAGCTaGGCAGCCCGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENRRRRS*AARSAC
Trigger: GCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCG...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTTGGCGAGTCTGCGGCTaGTGCAGGGCAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPWRVCG*CRAGET
Trigger: TGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCA...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTCCCACTCAGCAAGGATaGGGTGGAGCAGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPPTQQG*GGAASA
Trigger: GGCTGAAGCTGCTCCACCTCATCCTTGCTGAGTGGG...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATCGGTCATGTGCCTAATGAGCTATCCTTGCAGTGGGCTCTTCTCCTGCTTTTCTTGCAGGCTCTATGGTaGCTTCTGACTTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IGHVPNELSLQWALLLLFLQALW*LLTFRE
Trigger: TTCCCTGAAAGTCAGAAGTCACCATAGAGCCTGCAA...GAAAAGCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGGCACATGACCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTTGCAGGCTCTATGGTaGCTTCTGACTTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPLQALW*LLTFRE
Trigger: TTCCCTGAAAGTCAGAAGTCACCATAGAGCCTGCAA...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GATAAATCGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATGCTCTGGAAAGGAGGTaGCGTCACTCTCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: DKSNPPQHKPLLYKKCVYALERR*RHSHRR
Trigger: CCTCCTGTGAGAGTGACGTCACCTCCTTTCCAGAGC...ATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCGATTTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGCTCTCCCCCTTGGGCTaGTTTCTAAAGGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LDINLRLWHLGFPEHVVELSPLG*FLKGLL
Trigger: GAGCAGACCCTTTAGAAATCAGCCCAAGGGGGAGAG...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAACCAGGCTGTGGAGATaGTGTGCTCTCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRTRLWR*CALGML
Trigger: CAGCATCCCGAGAGCACATCATCTCCACAGCCTGGT...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTGGACACAGGCACAAGTaGGCAGCAGAAGCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPGHRHK*AAEAPR
Trigger: CCTCGGAGCTTCTGCTGCTCACTTGTGCCTGTGTCC...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAATCCCTTGGGCCAGCCTaGAGGGTCCAGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKSLGPA*RVQAEM
Trigger: CATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGA...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGCCGATCTGCTTGCGGTaGTGTAGCCAGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTPICLR*CSQWSS
Trigger: GCTGGACCACTGGCTACAGCACCGCAAGCAGATCGG...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCCGATCTGCTTGCGGTaGTGTAGCCAGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGPICLR*CSQWSS
Trigger: GCTGGACCACTGGCTACAGCACCGCAAGCAGATCGG...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACAAGACCTGCTTGACTaGCAGGTTGACCAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRAQDLLD*QVDQVV
Trigger: TACGACCTGGTCAACCTGGCAGTCAAGCAGGTCTTG...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGTTGTTGGCCAAGACCTaGTTGACTGCCAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLLLAKT*LTARLT
Trigger: GGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAACAA...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTAATCTCTGCTTTACCTaGCCCCTTCTCAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGINLCFT*PLLSKA
Trigger: AGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATT...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTACCACGTGCACTGGGTTCTaGTATGTGCCAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: FQSMSLRHFCTQRHMEFTTCTGF*YVPASL
Trigger: CAAAGATGCTGGCACATAGCAGAACCCAGTGCACGT...GGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGGCACCTGTTCCCTCCTaGCACCCACCTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLAPVPS*HPPYNC
Trigger: GCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGC...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAATCGCTGTCCACCAGGTaGAGGCTGATCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKSLSTR*RLISGL
Trigger: CAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGA...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGCCTGGCTGTGCGTTTaGGGTTGCGGCTCCCCACCA +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVAWLCV*GCGSPP
Trigger: TGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGC...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCACTCACTGCCTCCTCTTaGAAAGTCACTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSLTASS*KVTWAA
Trigger: AGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAG...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGCTCACTGCCTCCTCTTaGAAAGTCACTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LDINLRLWHLGFPEHVVELTASS*KVTWAA
Trigger: AGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAG...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGATCTTGCCCGCCAGCTaGTCACTGAGACTGCACAGT +
Preference number: 4 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLILPAS*SLRLHS
Trigger: ACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGAT...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCATCTTGCCCGCCAGCTaGTCACTGAGACTGCACAGT +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTILPAS*SLRLHS
Trigger: ACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGAT...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCGCCAGTGTGGTTTTCTaGGTCCTCTGCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLASVVF*VLCQRT
Trigger: TGTCCTCTGGCAGAGGACCCAGAAAACCACACTGGC...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTAGGATGGCCTGTGACTaGAGGACAGACGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVRMACD*RTDVLW
Trigger: CCACAGGACGTCTGTCCTCCAGTCACAGGCCATCCT...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTCTGCCGCTCAGCCTTaGCACAGCAGATGGAAAATA +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGISAAQP*HSRWKI
Trigger: TATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGA...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGTCAGACTGTGGCATTTaGGATTTCCAGAGCATGTCG +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALSDCGI*DFQSMS
Trigger: CGACATGCTCTGGAAATCCCAAATGCCACAGTCTGA...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGTCTCTTCTGGCATTTTaGTGGCTCTGCGGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGSLLAF*WLCGPP
Trigger: CGGCGGGCCGCAGAGCCACCAAAATGCCAGAAGAGA...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR CCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCACCAGCATGCCACTGTTaGCTGCACGCATCCTGCATT +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSPACHC*LHASCI
Trigger: AATGCAGGATGCGTGCAGCCAACAGTGGCATGCTGG...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409811.5
3UTR CAA 72 bp CATTTGGGATTTCCAGAGCATGTCGTTGAGGCACTTTaGTACCCAGAGGCACATGGAATTTACCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLGFPEHVVEAL*YPEAHGIYQAV
Trigger: CACAGCCTGGTAAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCCCAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGACACAGCCACAAAGATaGCCTCCGGGGAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGTQPQR*PPGSSL
Trigger: CAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGT...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACTGAGACTGCACAGTaGAGAGTAGTGCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTTETAQ*RVVLPE
Trigger: TTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGT...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCATTGGACTCACGATGCTaGAGGTGCTCTTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRALDSRC*RCSCSV
Trigger: TACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAA...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCACGGACACGGGCAGCTTaGAGAACTTGTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSRTRAA*RTCSGF
Trigger: AAAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCG...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAGGCCACAAAGCCCAGTaGGGACTGAACGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRGHKAQ*GLNEAE
Trigger: TTCAGCTTCGTTCAGTCCTCACTGGGCTTTGTGGCC...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
CDS-3UTR TCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGGCCACAAAGCCCAGTaGGGACTGAACGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKGHKAQ*GLNEAE
Trigger: TTCAGCTTCGTTCAGTCCTCACTGGGCTTTGTGGCC...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
CDS-3UTR TCA 90 bp CATTCTCTCTGGGCAGCCTTCACTGGCCCTACTCTCTTCCTTCCATCAGAAGATCTCTATGGTGACTTCTaGCTTTCAGGGAAAATGTCT +
Preference number: 4 (lower is better)
Translates to: HSLWAAFTGPTLFLPSEDLYGDF*LSGKMS
Trigger: AGACATTTTCCCTGAAAGTCAGAAGTCACCATAGAG...ATCTTCTGATGGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAGAGAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAACTCTCCCCCTTGGGCTaGTTTCTAAAGGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IWTSNLLFAHSYTTLHHQLSPLG*FLKGLL
Trigger: GAGCAGACCCTTTAGAAATCAGCCCAAGGGGGAGAG...TTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAGCAAGGATGGCCTGTaGCTGGAGGACAGACGTCCT +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPSKDGL*LEDRRP
Trigger: AGGACGTCTGTCCTCCAGTCACAGGCCATCCTTGCT...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GGATTTCCAGAGCATGTCGTTGAGGCACTTTTGTACCCAGAGGCACATGGAATTTCTCCTGCTTTTCACTaGAGAACCCTTATGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GFPEHVVEALLYPEAHGISPAFH*RTLMCC
Trigger: GCAGCACATAAGGGTTCTTCAGTGAAAAGCAGGAGA...AATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGATCAGTGCCAATTTATaGGACAAGTTTCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALISANL*DKFLPL
Trigger: GAGCGGCAGAAACTTGTCTCATAAATTGGCACTGAT...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGACTCCGGGGAGCTCACTaGCTCCTCTTGGAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRLRGAH*LLLESH
Trigger: GTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAG...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACTCTGGGCAGAGCCGTTaGCTTCCCTCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENSGQSR*LPSPSE
Trigger: CTCTGAAGGGGAGGGAAGGCAACGGCTCTGCCCAGA...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATATCGCTGTCCACCAGGTaGAGGCTGATCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVISLSTR*RLISGL
Trigger: CAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGA...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAACTCACTGCCTCCTCTTaGAAAGTCACTTGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: IWTSNLLFAHSYTTLHHQLTASS*KVTWAA
Trigger: AGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAG...TTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAGCTGGTCACCGCAGATaGGCACCTGCCTGTTACCAT +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIAGHRR*APACYH
Trigger: ATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGC...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCAGGCACCTCATACGTaGCTCGTCTTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENQAPHT*LVFSAR
Trigger: CCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTG...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAACAGGCACCTCATACGTaGCTCGTCTTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKQAPHT*LVFSAR
Trigger: CCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTG...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACTCCAGGGATGGCTCTaGGCAGAGCCGTTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLLQGWL*AEPLPS
Trigger: GGAAGGCAACGGCTCTGCCCAGAGCCATCCCTGGAG...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCACATGCTCCAGGGATaGCTCTGGGCAGAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENHMLQG*LWAEPL
Trigger: CAACGGCTCTGCCCAGAGCCATCCCTGGAGCATGTG...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTGCTGCTGCCCCAGGTaGAGGGAAGAGACCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEICCCPR*REETSR
Trigger: GCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCA...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACGGTTCTGCAGAGGGTTaGGGGCTCAGCCGAGAACAC +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENGSAEG*GLSREH
Trigger: GTGTTCTCGGCTGAGCCCCCAACCCTCTGCAGAACC...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTCTGGGCAGCCTTCACTaGCCCTACTCTCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPLGSLH*PYSLPS
Trigger: GGAAGGAAGAGAGTAGGGCCAGTGAAGGCTGCCCAG...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCATCTGCCGCTCAGCCTTaGCACAGCAGATGGAAAATA +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRASAAQP*HSRWKI
Trigger: TATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGA...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACGGGGTTGGGGATCATTaGTGGGTCTCCATTGCCCAT +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYGVGDH*WVSIAH
Trigger: ATGGGCAATGGAGACCCACCAATGATCCCCAACCCC...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAAGTACCCACCGGGGTTaGGGATCATTGGTGGGTCTC +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRSTHRG*GSLVGL
Trigger: GAGACCCACCAATGATCCCCAACCCCGGTGGGTACT...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTAGTCACTTGGGCCGCTaGGGGAAACAGCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVSHLGR*GKQPGC
Trigger: ACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACT...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGACGGACACGGGCAGCTTaGAGAACTTGTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRRTRAA*RTCSGF
Trigger: AAAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCG...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTAGGGCAAGTACACGAGTaGCAGCAGCACGTAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLGQVHE*QQHVGH
Trigger: GTGGCCTACGTGCTGCTGTCACTCGTGTACTTGCCC...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCCACAAAGCCCAGTaGGGACTGAACGAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTGHKAQ*GLNEAE
Trigger: TTCAGCTTCGTTCAGTCCTCACTGGGCTTTGTGGCC...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
CDS-3UTR TCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCCAGGCCGACTGCCTaGTTTTCCTCCTCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEISRPTA*FSSSPG
Trigger: GCCTGGGGAGGAGGAAAATCAGGCAGTCGGCCTGGA...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCTCTATGGTGACTTCTaGCTTTCAGGGAAAATGTCT +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALLYGDF*LSGKMS
Trigger: AGACATTTTCCCTGAAAGTCAGAAGTCACCATAGAG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACACCAGGCTGTGGAGATaGTGTGCTCTCGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENTRLWR*CALGML
Trigger: CAGCATCCCGAGAGCACATCATCTCCACAGCCTGGT...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCCCCCGCTACCCAGGATaGCCACTTTGGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEIPRYPG*PLWGPH
Trigger: ATGAGGCCCCCAAAGTGGGCATCCTGGGTAGCGGGG...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAACAAGACCTGCTTGACTaGCAGGTTGACCAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKQDLLD*QVDQVV
Trigger: TACGACCTGGTCAACCTGGCAGTCAAGCAGGTCTTG...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGACAAGACCTGCTTGACTaGCAGGTTGACCAGGTCGTA +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRQDLLD*QVDQVV
Trigger: TACGACCTGGTCAACCTGGCAGTCAAGCAGGTCTTG...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGCAGCCGCTGCTCACATaGTCCAGGGATGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEQPLLT*SRDGSG
Trigger: CCCAGAGCCATCCCTGGAGCATGTGAGCAGCGGCTG...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAGAAGAGACCAGCCGCTaGTCACATGCTCCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKEETSR*SHAPGM
Trigger: CATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTC...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGCTGATGCTCCATCAGTaGCAATTTATGAGACAAGTT +
Preference number: 4 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWLMLHQ*QFMRQV
Trigger: AACTTGTCTCATAAATTGGCACTGATGGAGCATCAG...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGATCTTGGAAAGTCACTTaGGCCGCTGAGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRSWKVT*AAEGNS
Trigger: GCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGA...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGATCTTGCCCGCCAGCTaGTCACTGAGACTGCACAGT +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGILPAS*SLRLHS
Trigger: ACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGAT...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAATCTTGCCCGCCAGCTaGTCACTGAGACTGCACAGT +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIILPAS*SLRLHS
Trigger: ACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGAT...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACCTGTTACCATCCCTTaGGCCAGCCTGCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLPVTIP*ASLQGP
Trigger: TGGACCCTGCAGGCTGGCCCAAGGGATGGTAACAGG...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCCGCTTGGCTTCTGGCTaGTCACCGCAGATGGGCACC +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEIRLASG*SPQMGT
Trigger: GGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCG...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGCCGAGACAGCACGCTTaGCTTCTGGCTGGTCACCGC +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEPRQHA*LLAGHR
Trigger: GCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGG...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGGGGAGGACGTGCACTaGGTTCTGCTATGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVGEDVH*VLLCAS
Trigger: GCTGGCACATAGCAGAACCCAGTGCACGTCCTCCCC...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCGTACCCAGAGGCACATaGAATTTACCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTVPRGT*NLPGCG
Trigger: TCCACAGCCTGGTAAATTCCATGTGCCTCTGGGTAC...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGGTACCCAGAGGCACATaGAATTTACCAGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LDINLRLWHLGFPEHVVEVPRGT*NLPGCG
Trigger: TCCACAGCCTGGTAAATTCCATGTGCCTCTGGGTAC...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCCTTGTCCATCTCTTCTaGCATTTTGGTGGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLLVHLF*HFGGSA
Trigger: CGCAGAGCCACCAAAATGCCAGAAGAGATGGACAAG...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
3UTR CAA 72 bp TCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTaGAGGCACTTTTGTACCCAGAGGCACATGGAATTT +
Preference number: 4 (lower is better)
Translates to: SDCGIWDFQSMS*RHFCTQRHMEF
Trigger: AAATTCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGACTGAGACTGCACAGTaGAGAGTAGTGCTCCCGGAA +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGTETAQ*RVVLPE
Trigger: TTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGT...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp GATAAATCGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATTTGGACTCACGATGCTaGAGGTGCTCTTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: DKSNPPQHKPLLYKKCVYLDSRC*RCSCSV
Trigger: TACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAA...ATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGTGGCGAGTCTGCGGCTaGTGCAGGGCAGGAGAAACA +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEWRVCG*CRAGET
Trigger: TGTTTCTCCTGCCCTGCATCAGCCGCAGACTCGCCA...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTAGCAAGGATGGCCTGTaGCTGGAGGACAGACGTCCT +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVSKDGL*LEDRRP
Trigger: AGGACGTCTGTCCTCCAGTCACAGGCCATCCTTGCT...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGGGGCAGCCTCATCTGTaGCATTCTCTCTGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEGQPHL*HSLWAA
Trigger: GGCTGCCCAGAGAGAATGTCACAGATGAGGCTGCCC...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGATCCAGAGCATGTCGTTaGGGCACTTTTGTACCCAGA +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRSRACR*GTFVPR
Trigger: TCTGGGTACAAAAGTGCCTCAACGACATGCTCTGGA...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGACAGGAGGATCCATTTaGAGGCTCTATGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLTGGSI*RLYGDF
Trigger: GAAGTCACCATAGAGCCTGCAAATGGATCCTCCTGT...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACGTTTTCTGGGTCCTCTaGCAGAGGACATTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYVFWVL*QRTFGV
Trigger: GACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAAC...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGTGGGCTCTTCTCCTaGTTTTCACTGAAGAACCCT +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLSGLFS*FSLKNP
Trigger: AGGGTTCTTCAGTGAAAAGCAGGAGAAGAGCCCACT...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp GATAAATCGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATTATGAGACAAGTTTCTaGCGCTCAGCCTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: DKSNPPQHKPLLYKKCVYYETSF*RSALAQ
Trigger: CTGTGCCAAGGCTGAGCGGCAGAAACTTGTCTCATA...ATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCGATTTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGTCTCCATTGCCCATaGTCTCCCTGCCTCTCATTA +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTGLHCP*SPCLSL
Trigger: TAATGAGAGGCAGGGAGAGCATGGGCAATGGAGACC...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTAATAAATGTCATCTCTaGGGCCCGCCGCTCGGAGCG +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVNKCHL*GPPLGA
Trigger: CGCTCCGAGCGGCGGGCCGCAGAGATGACATTTATT...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCCAGGCACCTCATACGTaGCTCGTCTTCTCGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEIQAPHT*LVFSAR
Trigger: CCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTG...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAAAGTTGGAGCCAGTGTaGTTTTCTGGGTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRKLEPV*FSGSSA
Trigger: GGCAGAGGACCCAGAAAACCACACTGGCTCCAACTT...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGACCTTCCATCAGAAGATaGCTTTGGGCCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRPSIRR*LWAQET
Trigger: AGTCTCCTGGGCCCAAAGCCATCTTCTGATGGAAGG...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGTTGGGGATCATTGGTaGGTCTCCATTGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRVGDHW*VSIAHA
Trigger: AGCATGGGCAATGGAGACCCACCAATGATCCCCAAC...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTTCTGGCATTTTGGTaGCAACAGCAGGCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENLLAFW*QQQAGA
Trigger: CGCACCAGCCTGCTGTTGCCACCAAAATGCCAGAAG...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR TCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCCCGCCAGCTGGTCACTaGGACTGCACAGTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEIPPAGH*DCTVKS
Trigger: ACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGG...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATATTGGACTCACGATGCTaGAGGTGCTCTTGCTCTGTA +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVILDSRC*RCSCSV
Trigger: TACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAA...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAACGGACACGGGCAGCTTaGAGAACTTGTTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKRTRAA*RTCSGF
Trigger: AAAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCG...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACTCAGGACTGACTTCGTaGAGACAGTCCTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENSGLTS*RQSFSP
Trigger: TGGGCTGAAGGACTGTCTTCACGAAGTCAGTCCTGA...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCATTTTTCCTCAGGACTaGCTTCGTGAAGACAGTCCT +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTIFPQD*LREDSP
Trigger: AGGACTGTCTTCACGAAGTCAGTCCTGAGGAAAAAT...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCATCAGTGCCAATTTATaGGACAAGTTTCTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLISANL*DKFLPL
Trigger: GAGCGGCAGAAACTTGTCTCATAAATTGGCACTGAT...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR TCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACGAAGTTGCCACACACTaGACGAAGCTGAACTCCCTC +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENEVATH*TKLNSL
Trigger: GAGGGAGTTCAGCTTCGTTCAGTGTGTGGCAACTTC...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR GCA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGCTCAAACCTCCTATTTaGACACAGTTATACCACTTT +
Preference number: 4 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPLKPPI*TQLYHF
Trigger: AAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAG...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCTCAAACCTCCTATTTaGACACAGTTATACCACTTT +
Preference number: 4 (lower is better)
Translates to: ADAPSVPIYETSFCRSALLKPPI*TQLYHF
Trigger: AAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGCACAATAGCATGATCTaGTCTTCTCTTAACGTACGG +
Preference number: 4 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLHNSMI*SSLNVR
Trigger: CCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACGGCATGGCCTTCCCTaGATCGGTCATGTGCCTAAT +
Preference number: 4 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLRHGLP*IGHVPN
Trigger: ATTAGGCACATGACCGATGCAGGGAAGGCCATGCCG...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTACGTGCACTGGGTTCTaGTATGTGCCAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPTCTGF*YVPASL
Trigger: CAAAGATGCTGGCACATAGCAGAACCCAGTGCACGT...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCCACCCACCTTATAATTaGTTCCCTCTTGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTHPPYN*FPLEHL
Trigger: AAGGTGCTCAAGAGGGAAGCAATTATAAGGTGGGTG...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAGCACCTGTTCCCTCCTaGCACCCACCTTATAATTGC +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKAPVPS*HPPYNC
Trigger: GCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGC...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACAGTACACAGCCCGCCTaGCTTTCGTGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENSTQPA*LSCDCP
Trigger: TGGACAATCACACGAAAGGCAGGCGGGCTGTGTACT...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACATGCCACTGTTGGCTaGACGCATCCTGCATTTAAC +
Preference number: 4 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIHATVG*THPAFN
Trigger: GTTAAATGCAGGATGCGTGCAGCCAACAGTGGCATG...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CCA 90 bp GAAGGCATAGATTTTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCTCTGCAAGAGCCTTaGGGAAGTAGCAAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: EGIDFRYQPQTVAFGISRALQEP*GSSKRE
Trigger: TTCCCTTTTGCTACTTCCCCAAGGCTCTTGCAGAGC...TCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAAAATCTATGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAATGCTCTAGGCCTTCCTaGGAGTCATTCAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKCSRPS*ESFKLK
Trigger: CTTCAGTTTGAATGACTCCCAGGAAGGCCTAGAGCA...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCAGGATGGCCTGTGACTaGAGGACAGACGTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEIRMACD*RTDVLW
Trigger: CCACAGGACGTCTGTCCTCCAGTCACAGGCCATCCT...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTTGTGGCAGATCAACCTaGTTCTGCAGAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVCGRST*FCRGLG
Trigger: CCCCAACCCTCTGCAGAACCAGGTTGATCTGCCACA...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGATGTGCCAGCATCTTTaGTATAAGGAGCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: LDINLRLWHLGFPEHVVEMCQHL*YKEPFP
Trigger: AGGGAATGGCTCCTTATACCAAAGATGCTGGCACAT...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCTGTGTTTCCTGCACTaGAAGTTGCCACACACTGAA +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYLCFLH*KLPHTE
Trigger: TTCAGTGTGTGGCAACTTCCAGTGCAGGAAACACAG...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR TCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGGGCCCAGGAGACTCATaGAGACCTCACCCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEGPGDS*RPHPLC
Trigger: ACAAAGAGGGTGAGGTCTTCATGAGTCTCCTGGGCC...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CCAGTGTGGTTTTCTGGGTCCTCTGCCAGAGGACATTTGGAGTCCCCAATATTTACAGTTATACCACTTTaGACCACCAAGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PVWFSGSSARGHLESPIFTVIPL*TTKKRK
Trigger: TTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT...AAATATTGGGGACTCCAAATGTCCTCTGGCAGAGGACCCAGAAAACCACACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAATGCTCTTCCCTCTTGTaGTTTGGGGCAGCAGCATTT +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKCSSLL*FGAAAF
Trigger: AAATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCA...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGTGGAGGCTGATCAGTaGCTTGTCCATCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVVEADQ*LVHLFW
Trigger: CCAGAAGAGATGGACAAGCCACTGATCAGCCTCCAC...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTAGTGGAGGCTGATCAGTaGCTTGTCCATCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLVEADQ*LVHLFW
Trigger: CCAGAAGAGATGGACAAGCCACTGATCAGCCTCCAC...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAACCAGGTACTCAGCATTaGACTCACGATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKPGTQH*THDAEG
Trigger: ACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGG...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTCTGCCAGAGGACATTTaGAGTCCCCAATATTTTTCC +
Preference number: 4 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVLPEDI*SPQYFS
Trigger: GGAAAAATATTGGGGACTCCAAATGTCCTCTGGCAG...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTGTGGCAGATCAACCTaGTTCTGCAGAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEICGRST*FCRGLG
Trigger: CCCCAACCCTCTGCAGAACCAGGTTGATCTGCCACA...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACATGTGCCAGCATCTTTaGTATAAGGAGCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYMCQHL*YKEPFP
Trigger: AGGGAATGGCTCCTTATACCAAAGATGCTGGCACAT...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
3UTR CAA 72 bp TTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTaGCACACAGTTATACCACTTTGCACCACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: FESQEFGPQTSY*HTVIPLCTTKK
Trigger: TTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACG +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSNVTIA*SALLLT
Trigger: CGTTAAGAGAAGAGCAGATCATGCTATTGTGACATT...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGATTTTTCCTCAGGACTaGCTTCGTGAAGACAGTCCT +
Preference number: 4 (lower is better)
Translates to: PICTQLYHFAPPRKENLTIFPQD*LREDSP
Trigger: AGGACTGTCTTCACGAAGTCAGTCCTGAGGAAAAAT...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGTTGTTGGCCAAGACCTaGTTGACTGCCAGGTTGACC +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISELLAKT*LTARLT
Trigger: GGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAACAA...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAACACAATAGCATGATCTaGTCTTCTCTTAACGTACGG +
Preference number: 4 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKHNSMI*SSLNVR
Trigger: CCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp GATAAATCGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATCACAATAGCATGATCTaGTCTTCTCTTAACGTACGG +
Preference number: 4 (lower is better)
Translates to: DKSNPPQHKPLLYKKCVYHNSMI*SSLNVR
Trigger: CCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG...ATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCGATTTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACAGGAGGATCCATTTaGAGGCTCTATGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKTGGSI*RLYGDF
Trigger: GAAGTCACCATAGAGCCTGCAAATGGATCCTCCTGT...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTCTAATGAGCTATCCTTaGAGTGGGCTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVLMSYP*SGLFSC
Trigger: GCAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAG...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAGGTGTTTATTTGCACTaGTTTTATACTGTCTACCAG +
Preference number: 4 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRAGVYLH*FYTVYQ
Trigger: CTGGTAGACAGTATAAAAGCAGTGCAAATAAACACC...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTCCAGGTACTCAGCATTaGACTCACGATGCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVPGTQH*THDAEG
Trigger: ACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGG...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTGGGTTCTGCTATGTaGCAGCATCTTTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENLGSAM*QHLWYK
Trigger: CTTATACCAAAGATGCTGGCACATAGCAGAACCCAG...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGTGTTTATTTGCACTaGTTTTATACTGTCTACCAG +
Preference number: 4 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSGVYLH*FYTVYQ
Trigger: CTGGTAGACAGTATAAAAGCAGTGCAAATAAACACC...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCTCTTCTGGCATTTTaGTGGCTGGGTGTGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEISLLAF*WLGVLA
Trigger: TGCCAACACACCCAGCCACCAAAATGCCAGAAGAGA...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS-3UTR CCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACATCAACCTCAGACTGTaGCATTTGGGATTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENINLRL*HLGFPE
Trigger: CTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGAT...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTCTGATGCTCCATCAGTaGCAATTTATGAGACAAGTT +
Preference number: 4 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPLMLHQ*QFMRQV
Trigger: AACTTGTCTCATAAATTGGCACTGATGGAGCATCAG...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACACCCACCTTATAATTaGTTCCCTCTTGAGCACCTT +
Preference number: 4 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLHPPYN*FPLEHL
Trigger: AAGGTGCTCAAGAGGGAAGCAATTATAAGGTGGGTG...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGATCAGAAGATGGCTTTaGGCCCAGGAGACTCATGAA +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEIRRWL*AQETHE
Trigger: TTCATGAGTCTCCTGGGCCCAAAGCCATCTTCTGAT...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGCCTTGGCACAGCAGATaGAAAATACCTGCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEPWHSR*KIPAGR
Trigger: TCTTCCTGCAGGTATTTTCCATCTGCTGTGCCAAGG...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAACAGTTATACCACTTTaGACCACCAAGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRTVIPL*TTKKRK
Trigger: TTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CCA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGCTGCCAGAGGACATTTaGAGTCCCCAATATTTTTCC +
Preference number: 4 (lower is better)
Translates to: SSLNVRHLFLNLQVEISELPEDI*SPQYFS
Trigger: GGAAAAATATTGGGGACTCCAAATGTCCTCTGGCAG...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR GCA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGACAGTTATACCACTTTaGACCACCAAGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGTVIPL*TTKKRK
Trigger: TTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTCAAACCTCCTATTTaGACACAGTTATACCACTTT +
Preference number: 4 (lower is better)
Translates to: KPPICTQLYHFAPPRKENLKPPI*TQLYHF
Trigger: AAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAG...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
3UTR CAA 72 bp AATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTaGTTTTTAAATCTACAAGTTGAAATCTCAGAGACC +
Preference number: 4 (lower is better)
Translates to: NSMICSSLNVRH*FLNLQVEISET
Trigger: GGTCTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR TCA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCAATGTCACAATAGCATaGTCTGCTCTTCTCTTAACG +
Preference number: 4 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEINVTIA*SALLLT
Trigger: CGTTAAGAGAAGAGCAGATCATGCTATTGTGACATT...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR GCA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTACAGTTATACCACTTTaGACCACCAAGAAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVTVIPL*TTKKRK
Trigger: TTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 90 bp GGTGCTGTAGCCAGTGGTCCAGCCAGTCGGGGAAGCGCTGGTACTTaGTGCCGCGCCGCAGCTGCAGGGCAGCCGCCAGCACGCCGGGCA +
Preference number: 5 (lower is better)
Translates to: GAVASGPASRGSAGT*CRAAAAGQPPARRA
Trigger: TGCCCGGCGTGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 90 bp GCTGTAGCCAGTGGTCCAGCCAGTCGGGGAAGCGCTGGTACTTGGTaGCGCGCCGCAGCTGCAGGGCAGCCGCCAGCACGCCGGGCAAGT +
Preference number: 5 (lower is better)
Translates to: AVASGPASRGSAGTW*RAAAAGQPPARRAS
Trigger: ACTTGCCCGGCGTGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 90 bp TCCAGCCAGTCGGGGAAGCGCTGGTACTTGGTGCCGCGCCGCAGCTaGAGGGCAGCCGCCAGCACGCCGGGCAAGTACACGAGTGACAGC +
Preference number: 5 (lower is better)
Translates to: SSQSGKRWYLVPRRS*RAAASTPGKYTSDS
Trigger: GCTGTCACTCGTGTACTTGCCCGGCGTGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 90 bp TGCTTGCGGTGCTGTAGCCAGTGGTCCAGCCAGTCGGGGAAGCGCTaGTACTTGGTGCCGCGCCGCAGCTGCAGGGCAGCCGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: CLRCCSQWSSQSGKR*YLVPRRSCRAAAST
Trigger: CGTGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 90 bp GTTTCTCAGGAGGCGAGGGCCCTGCCAGGGTCTTGCACAGCCAGCTaGCTCCCGCAGCCTGCACGCCAGCTCTTGGCCACAGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VSQEARALPGSCTAS*LPQPARQLLATGAG
Trigger: TCCAGCCCCTGTGGCCAAGAGCTGGCGTGCAGGCTGCGGGAGGCAGCTGGCTGTGCAAGACCCTGGCAGGGCCCTCGCCTCCTGAGAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCCCAGGATGCCCACTTaGGGGGCCTCATCGGGGACC +
Preference number: 5 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPPRMPT*GASSGT
Trigger: GGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGG...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 90 bp AGTTGTAGGCATAGAAGCAGACGAAGAGCCCCAGGGCCAGCAGGGTaGGCACCTTCCAGGCCGGGAGGAGGCGCAGGGGCATGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: SCRHRSRRRAPGPAG*APSRPGGGAGAWPP
Trigger: TGGAGGCCATGCCCCTGCGCCTCCTCCCGGCCTGGAAGGTGCCCACCCTGCTGGCCCTGGGGCTCTTCGTCTGCTTCTATGCCTACAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCAGCCTGGCTGTGCGTTaGGGGTTGCGGCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPSLAVR*GLRLPT
Trigger: GGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCT...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS TCA 90 bp ACAGCCTGGCTGTGCGTTTGGGGTTGCGGCTCCCCACCACCACTTTaGAGCCAGAGCCCACCAGGCGTGTGGCCAGGGAGCGGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: TAWLCVWGCGSPPPL*SQSPPGVWPGSGQS
Trigger: ACTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 90 bp CCTCCACCTCCCAGGCTGACGCCAGGGATCCCATGTCCACGGGCATaGAGCCCATGGCGAGCGCCATCTCCGAGACAGCACGCTTGGCTT +
Preference number: 5 (lower is better)
Translates to: PPPPRLTPGIPCPRA*SPWRAPSPRQHAWL
Trigger: AAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGGGATCCCTGGCGTCAGCCTGGGAGGTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 90 bp CAGAAGAAGCTGAGCAGCCCGATCTGCTTGCGGTGCTGTAGCCAGTaGTCCAGCCAGTCGGGGAAGCGCTGGTACTTGGTGCCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: QKKLSSPICLRCCSQ*SSQSGKRWYLVPRR
Trigger: GCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGAGCCTGGCTGTGCGTTaGGGGTTGCGGCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGSLAVR*GLRLPT
Trigger: GGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCT...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GGTCCAGCCGTAGGTGAGCGTGTGCAGTGTGCTCAGCACGAGGGCCACAAAGCCCACGGCAGTGTGGTGTaGACCACGGACACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GPAVGERVQCAQHEGHKAHGSVV*TTDTGS
Trigger: GCTGCCCGTGTCCGTGGTCAACACCACACTGCCGTG...GGCTTTGTGGCCCTCGTGCTGAGCACACTGCACACGCTCACCTACGGCTGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp GCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTCCAGGGATGGAGCAGCCCGATCTGCTaGCGGTGCTGTAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: AAPGGGKRPAAAHMLQGWSSPIC*RCCSQW
Trigger: CCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCT...CCATCCCTGGAGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp AGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCAGCAGCCCGATCTGCTaGCGGTGCTGTAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RKPNGLRAPSLVCPGSRASSPIC*RCCSQW
Trigger: CCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCT...GGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 90 bp GCAAGCAGAAGCTGTAGAGGGCGTGCAGGGCGGCGCAGAAGAAGCTaGGCAGCCCGATCTGCTTGCGGTGCTGTAGCCAGTGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: ASRSCRGRAGRRRRS*AARSACGAVASGPA
Trigger: GGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCACGCCCTCTACAGCTTCTGCTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 90 bp GGTGGCAACAGCAGGCTGGTGCGACATCCGGCTGACGTGAGGGTCTaGGGCTCTCAGGTCACTCGACAGCCTCACCGTGAGGTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: GGNSRLVRHPADVRV*GSQVTRQPHREVSH
Trigger: GTGGCTCACCTCACGGTGAGGCTGTCGAGTGACCTGAGAGCCTCAGACCCTCACGTCAGCCGGATGTCGCACCAGCCTGCTGTTGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS GCA 90 bp TGCAGGGCGGCGCAGAAGAAGCTGAGCAGCCCGATCTGCTTGCGGTaGTGTAGCCAGTGGTCCAGCCAGTCGGGGAAGCGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: CRAAQKKLSSPICLR*CSQWSSQSGKRWYL
Trigger: CAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATCTCCCCACCACCACTTaGAAGCCAGAGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: TSCGPGGALPSCALGQQHLPTTT*KPEPTR
Trigger: CCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAG...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCTTGGCCAAGACCTGCTaGACTGCCAGGTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPLAKTC*TARLTR
Trigger: CCTGGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAA...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CCTCTCCCAGCCTCTCCGGATCCTGGCGAGTCTGCGGCTGATGCAGGGCAGGAGTTGGCCAAGACCTGCTaGACTGCCAGGTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: PLPASPDPGESAADAGQELAKTC*TARLTR
Trigger: CCTGGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAA...CTCCTGCCCTGCATCAGCCGCAGACTCGCCAGGATCCGGAGAGGCTGGGAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCCTCTGGGCAGAGCCGTaGCCTTCCCTCCCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPLWAEP*PSLPFR
Trigger: TCTGAAGGGGAGGGAAGGCAACGGCTCTGCCCAGAG...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS TCA 90 bp TGCACGCCAGCTCTTGGCCACAGGGGCTGGACCGGGAGTGGTGACTaGTGCTTGGTTGGAGAGTGCACTGAGAGAGCGCAGCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: CTPALGHRGWTGSGD*CLVGECTERAQLWP
Trigger: AGGCCAGAGCTGCGCTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGTGGCCAAGAGCTGGCGTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS GCA 90 bp AGTTTGCAATGGACGGCAGTGAGGTCACGGCCAGCAGGGACAACGTaGCGAGGGCCAGCACTCCCAGGGAGAGGTAGATCTCCATCCGCC +
Preference number: 5 (lower is better)
Translates to: SLQWTAVRSRPAGTT*RGPALPGRGRSPSA
Trigger: GGCGGATGGAGATCTACCTCTCCCTGGGAGTGCTGGCCCTCGGCACGTTGTCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCAAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 90 bp GAAGCCCATGGCGAGCGCCATCTCCGAGACAGCACGCTTGGCTTCTaGCTGGTCACCGCAGATGGGCACCTGCCTGTTACCATCCCTTGG +
Preference number: 5 (lower is better)
Translates to: EAHGERHLRDSTLGF*LVTADGHLPVTIPW
Trigger: CCAAGGGATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCTCACTGCCTCCTCTaGGAAAGTCACTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGAHCLL*ESHLGR
Trigger: GCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGC...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGTAGAACTTAGCAGCCCGATCTGCTaGCGGTGCTGTAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: DDAGHQQREREGGRQVELSSPIC*RCCSQW
Trigger: CCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCT...AAGTTCTACCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp GAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGTGCCCGGGGTCCAGAGCCCCAGAGGTGGCTCTTGTaGGCCAAGACCTGCTTGACT +
Preference number: 5 (lower is better)
Translates to: ENLTGSGHRPSCARGPEPQRWLL*AKTCLT
Trigger: AGTCAAGCAGGTCTTGGCCAACAAGAGCCACCTCTG...GGGCTCTGGACCCCGGGCACACGAGGGACGGTGCCCTGAGCCCGTTAGGTTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATCGGGGTTGGGGATCATaGGTGGGTCTCCATTGCCCA +
Preference number: 5 (lower is better)
Translates to: TSCGPGGALPSCALGQQHRGWGS*VGLHCP
Trigger: TGGGCAATGGAGACCCACCAATGATCCCCAACCCCG...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCCAGTACCCACCGGGGTaGGGGATCATTGGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPQYPPG*GIIGGS
Trigger: AGACCCACCAATGATCCCCAACCCCGGTGGGTACTG...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS TCA 90 bp GAAGCTGAACTCCCTCCAGTTGAGCGAGTTTGCAATGGACGGCAGTaGGGTCACGGCCAGCAGGGACAACGTGCCGAGGGCCAGCACTCC +
Preference number: 5 (lower is better)
Translates to: EAELPPVERVCNGRQ*GHGQQGQRAEGQHS
Trigger: GGAGTGCTGGCCCTCGGCACGTTGTCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 90 bp GGCATTTTGGTGGCAACAGCAGGCTGGTGCGACATCCGGCTGACGTaGGGGTCTGAGGCTCTCAGGTCACTCGACAGCCTCACCGTGAGG +
Preference number: 5 (lower is better)
Translates to: GILVATAGWCDIRLT*GSEALRSLDSLTVR
Trigger: CCTCACGGTGAGGCTGTCGAGTGACCTGAGAGCCTCAGACCCTCACGTCAGCCGGATGTCGCACCAGCCTGCTGTTGCCACCAAAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CCA 90 bp CAGCTCTTGGCCACAGGGGCTGGACCGGGAGTGGTGACTGATGCTTaGTTGGAGAGTGCACTGAGAGAGCGCAGCTCTGGCCTGCTGCTT +
Preference number: 5 (lower is better)
Translates to: QLLATGAGPGVVTDA*LESALRERSSGLLL
Trigger: AAGCAGCAGGCCAGAGCTGCGCTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGTGGCCAAGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp GACTTCGTGAAGACAGTCCTTCAGCCCAGGCAGGGCTCAACTCTGACGCCCGGGGCCTCATCGGGGACCTaGGCAAGGCTACTATCGCTG +
Preference number: 5 (lower is better)
Translates to: DFVKTVLQPRQGSTLTPGASSGT*ARLLSL
Trigger: CAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGC...CCCGGGCGTCAGAGTTGAGCCCTGCCTGGGCTGAAGGACTGTCTTCACGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GGTCCAGAGCCCAGGGCAGGCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCATGCTGAAGGTGCTCTaGCTCTGTAGGGTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: GPEPRAGTSYVARLLGQGMLKVL*LCRVAH
Trigger: GTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCAT...GCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGCCTGCCCTGGGCTCTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS TCA 90 bp CTTCTGGCATTTTGGTGGCAACAGCAGGCTGGTGCGACATCCGGCTaGCGTGAGGGTCTGAGGCTCTCAGGTCACTCGACAGCCTCACCG +
Preference number: 5 (lower is better)
Translates to: LLAFWWQQQAGATSG*REGLRLSGHSTASP
Trigger: CGGTGAGGCTGTCGAGTGACCTGAGAGCCTCAGACCCTCACGTCAGCCGGATGTCGCACCAGCCTGCTGTTGCCACCAAAATGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CCA 90 bp AAGATGACCTCCGGGGAGCTCACTGCCTCCTCTTGGAAAGTCACTTaGGCCGCTGAGGGAAACAGCCTGGCTGTGCGTTTGGGGTTGCGG +
Preference number: 5 (lower is better)
Translates to: KMTSGELTASSWKVT*AAEGNSLAVRLGLR
Trigger: CCGCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CACCGGGCAAAGGACCAGGCACAGACTCCAGGCCGACTGCCTGATTTTCCTCCTGCTCACTGCCTCCTCTaGGAAAGTCACTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: HRAKDQAQTPGRLPDFPPAHCLL*ESHLGR
Trigger: GCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGC...AGGAGGAAAATCAGGCAGTCGGCCTGGAGTCTGTGCCTGGTCCTTTGCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCACCTCATACGTGGCTCGTCTTCTCGGCCAGGGCGTGGTCTGTGGGCAGCGTGCAGGCAGAGATGACATaGAAGGCCTTGACCACTGTG +
Preference number: 5 (lower is better)
Translates to: APHTWLVFSARAWSVGSVQAEMT*KALTTV
Trigger: CACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTG...CACGCTGCCCACAGACCACGCCCTGGCCGAGAAGACGAGCCACGTATGAGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp CACCGGGCAAAGGACCAGGCACAGACTCCAGGCCGACTGCCTGATTTTCCTCCTCGGGGTTGGGGATCATaGGTGGGTCTCCATTGCCCA +
Preference number: 5 (lower is better)
Translates to: HRAKDQAQTPGRLPDFPPRGWGS*VGLHCP
Trigger: TGGGCAATGGAGACCCACCAATGATCCCCAACCCCG...AGGAGGAAAATCAGGCAGTCGGCCTGGAGTCTGTGCCTGGTCCTTTGCCCGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCCTCCTGCTGCTGCCCCAGGTGGAGGGAAGAGACCAGCCGCTGCTCACATGCTGTCGTTGAGGCACTTTaGTACCCAGAGGCACATGGA +
Preference number: 5 (lower is better)
Translates to: ASCCCPRWREETSRCSHAVVEAL*YPEAHG
Trigger: TCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGAC...AGCATGTGAGCAGCGGCTGGTCTCTTCCCTCCACCTGGGGCAGCAGCAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TCGGCCAGGGCGTGGTCTGTGGGCAGCGTGAACTTGATGGTGCTCTCCCTCTCCCTGAACTCCCTCCAGTaGAGCGAGTTTGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: SARAWSVGSVNLMVLSLSLNSLQ*SEFAMD
Trigger: GTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAG...GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCACAGACCACGCCCTGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGCCTAATGAGCTATCCTaGCAGTGGGCTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGPNELS*QWALLL
Trigger: CAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGG...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS CCA 90 bp AACACAGCCACAAAGATGACCTCCGGGGAGCTCACTGCCTCCTCTTaGAAAGTCACTTGGGCCGCTGAGGGAAACAGCCTGGCTGTGCGT +
Preference number: 5 (lower is better)
Translates to: NTATKMTSGELTASS*KVTWAAEGNSLAVR
Trigger: ACGCACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 90 bp CTTGGCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTGATCAGTaGCTTGTCCATCTCTTCTGGCATTTTGGTGGCTCTGCGGCCCGC +
Preference number: 5 (lower is better)
Translates to: LGKATIAVHQVEADQ*LVHLFWHFGGSAAR
Trigger: GCGGGCCGCAGAGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR CAA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCCTCCCCACCACCACTTaGAAGCCAGAGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: RWHLFPPATHLIIASLLSLPTTT*KPEPTR
Trigger: CCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAG...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TGGAGGACAGACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGGCAGCTTGAAGAACTaGTTCTGGCTTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: WRTDVLWPRRCSSLLCFGGSLKN*FWLSCT
Trigger: TGTGCAGGAAAGCCAGAACAAGTTCTTCAAGCTGCC...CCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGTCTGTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp AAATACCTGCAGGAAGAGCTTCCCCGGCATGGCCTTCCCTGCATCGGTCATGTGGTGGGCAGCGTGAACTaGATGGTGCTCTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KYLQEELPRHGLPCIGHVVGSVN*MVLSLS
Trigger: GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCAC...CACATGACCGATGCAGGGAAGGCCATGCCGGGGAAGCTCTTCCTGCAGGTATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCAGGCAGCCAGTACCCACCGGGGTTGGGGATCATTGGTGGGTCTCCATTGCCCGGAAGGAAATTACACTaGTTCCCAAGCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: AGSQYPPGLGIIGGSPLPGRKLH*FPSQAH
Trigger: GTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCC...GGGCAATGGAGACCCACCAATGATCCCCAACCCCGGTGGGTACTGGCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS TCA 90 bp CGGGGACCTTGGCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCTCTTCTGGCATTTTGGTGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: RGPWQGYYRCPPGGG*SVACPSLLAFWWLG
Trigger: ACCCAGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS TCA 90 bp ATCCACCAGGATCTTGCCCGCCAGCTGGTCACTGAGACTGCACAGTaGAGAGTAGTGCTCCCGGAACACAGCCACAAAGATGACCTCCGG +
Preference number: 5 (lower is better)
Translates to: IHQDLARQLVTETAQ*RVVLPEHSHKDDLR
Trigger: CCGGAGGTCATCTTTGTGGCTGTGTTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGATCCTGGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 90 bp CGGGGACCTTGGCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCTCTTCTGGCATTTTGGTGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RGPWQGYYRCPPGGG*SVACPSLLAFWWLC
Trigger: GCAGAGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGGTCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS CCA 90 bp TCTCAGGTCACTCGACAGCCTCACCGTGAGGTGAGCCACCCTTTCTaGCTCAGTCTCCAACCAGGACAGCCTGGCTTTGGTTCTGACTCT +
Preference number: 5 (lower is better)
Translates to: SQVTRQPHREVSHPF*LSLQPGQPGFGSDS
Trigger: AGAGTCAGAACCAAAGCCAGGCTGTCCTGGTTGGAGACTGAGCCAGAAAGGGTGGCTCACCTCACGGTGAGGCTGTCGAGTGACCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGAGCCTGGCTGTGCGTTaGGGGTTGCGGCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPSLAVR*GLRLPT
Trigger: GGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCT...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GACGACGCAGGGCACCAGCAGCGTGAGCGTGAAGGTGGGAGGCAGGTAGAACTTGGCAGCTTGAAGAACTaGTTCTGGCTTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: DDAGHQQREREGGRQVELGSLKN*FWLSCT
Trigger: TGTGCAGGAAAGCCAGAACAAGTTCTTCAAGCTGCC...AAGTTCTACCTGCCTCCCACCTTCACGCTCACGCTGCTGGTGCCCTGCGTCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGTGGGCAGCGTGAACTaGATGGTGCTCTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLVGSVN*MVLSLS
Trigger: GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCAC...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGCTCTGGGCAGAGCCGTaGCCTTCCCTCCCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRLWAEP*PSLPFR
Trigger: TCTGAAGGGGAGGGAAGGCAACGGCTCTGCCCAGAG...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCCAGTACCCACCGGGGTaGGGGATCATTGGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLQYPPG*GIIGGS
Trigger: AGACCCACCAATGATCCCCAACCCCGGTGGGTACTG...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS TCA 90 bp GACTGCACAGTGAAGAGTAGTGCTCCCGGAACACAGCCACAAAGATaGCCTCCGGGGAGCTCACTGCCTCCTCTTGGAAAGTCACTTGGG +
Preference number: 5 (lower is better)
Translates to: DCTVKSSAPGTQPQR*PPGSSLPPLGKSLG
Trigger: CCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGTTCCGGGAGCACTACTCTTCACTGTGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 90 bp CGGGGACCTTGGCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTaGTCAGTGGCTTGTCCATCTCTTCTGGCATTTTGGTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: RGPWQGYYRCPPGGG*SVACPSLLAFWWQQ
Trigger: CTGTTGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGGTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGCACGGCAGTGTGGTGTaGACCACGGACACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GKEITLVPKPGSLMALERHGSVV*TTDTGS
Trigger: GCTGCCCGTGTCCGTGGTCAACACCACACTGCCGTG...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGAGCAGCCCGATCTGCTaGCGGTGCTGTAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWSSPIC*RCCSQW
Trigger: CCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCT...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp ACGTCCTGTGGCCCCGGCGGTGCTCTTCCCTCTTGTGCTTTGGGGCAGCAGCATTTGAGTCCCAGGAATTaGGACCTCAAACCTCCTATT +
Preference number: 5 (lower is better)
Translates to: TSCGPGGALPSCALGQQHLSPRN*DLKPPI
Trigger: AATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAA...ATGCTGCTGCCCCAAAGCACAAGAGGGAAGAGCACCGCCGGGGCCACAGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS CCA 90 bp CTTGGCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTGATCAGTaGCTTGTCCATCTCTTCTGGCATTTTGGTGGCAACAGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LGKATIAVHQVEADQ*LVHLFWHFGGNSRL
Trigger: CAGCCTGCTGTTGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp CGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATATCTCTGCCCAGGATGCCCACTTaGGGGGCCTCATCGGGGACC +
Preference number: 5 (lower is better)
Translates to: RTHHSTSLFCTKSVCISLPRMPT*GASSGT
Trigger: GGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGG...CAGAGATATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCAATGCTAAAATCTCTGCTTTACCTGCCCCCTTCTCAGCAAGGCTCTCTGTGGACATCCACCAGGATCTaGCCCGCCAGCTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: AMLKSLLYLPPSQQGSLWTSTRI*PASWSL
Trigger: CAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGT...CCACAGAGAGCCTTGCTGAGAAGGGGGCAGGTAAAGCAGAGATTTTAGCATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS TCA 90 bp CGGGTTCCACTGCCTGTGTTTCCTGCACTGGAAGTTGCCACACACTaGACGAAGCTGAACTCCCTCCAGTTGAGCGAGTTTGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: RVPLPVFPALEVATH*TKLNSLQLSEFAMD
Trigger: GTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTTCAGTGTGTGGCAACTTCCAGTGCAGGAAACACAGGCAGTGGAACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCCCCAGGATGCCCACTTaGGGGGCCTCATCGGGGACC +
Preference number: 5 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTPRMPT*GASSGT
Trigger: GGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGG...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGGCTCACTGCCTCCTCTaGGAAAGTCACTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPAHCLL*ESHLGR
Trigger: GCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGC...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGACATCCACCAGGATCTaGCCCGCCAGCTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPTSTRI*PASWSL
Trigger: CAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGT...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCCCCATGAGGAGGAAGTaGGAGCCAGTGTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLPMRRK*EPVWFS
Trigger: AGAAAACCACACTGGCTCCAACTTCCTCCTCATGGG...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGATCTCTTCTGGCATTTaGGTGGCTCTGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPISSGI*VALRPA
Trigger: GGCGGGCCGCAGAGCCACCAAAATGCCAGAAGAGAT...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR CAA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGACCTGCACGCCAGCTCTaGGCCACAGGGGCTGGACCG +
Preference number: 5 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRPARQL*ATGAGP
Trigger: CGGTCCAGCCCCTGTGGCCAAGAGCTGGCGTGCAGG...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS GCA 90 bp TTGGGACTGAGATTCAGGTCTTCGGGTTCCACTGCCTGTGTTTCCTaGACTGGAAGTTGCCACACACTGAACGAAGCTGAACTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LGLRFRSSGSTACVS*TGSCHTLNEAELPP
Trigger: TGGAGGGAGTTCAGCTTCGTTCAGTGTGTGGCAACTTCCAGTGCAGGAAACACAGGCAGTGGAACCCGAAGACCTGAATCTCAGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCGGCAGCTTGAAGAACTaGTTCTGGCTTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLGSLKN*FWLSCT
Trigger: TGTGCAGGAAAGCCAGAACAAGTTCTTCAAGCTGCC...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTTGGCCAAGACCTGCTaGACTGCCAGGTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPLAKTC*TARLTR
Trigger: CCTGGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAA...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TGCTCTCCCTGCCTCTCATTAGTAGGGAATCGATGGGCCCTTGTTATGCCAAGGCCCATGAGGAGGAAGTaGGAGCCAGTGTGGTTTTCT +
Preference number: 5 (lower is better)
Translates to: CSPCLSLVGNRWALVMPRPMRRK*EPVWFS
Trigger: AGAAAACCACACTGGCTCCAACTTCCTCCTCATGGG...CCTTGGCATAACAAGGGCCCATCGATTCCCTACTAATGAGAGGCAGGGAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTCCCTCTTCCAGAGCATGTCGTaGAGGCACTTTTGTACCCAG +
Preference number: 5 (lower is better)
Translates to: PLCTTKKRKPNGLRAPSLFQSMS*RHFCTQ
Trigger: CTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA...GAGGGACGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCCTCCCCACCACCACTTaGAAGCCAGAGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTLPTTT*KPEPTR
Trigger: CCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAG...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CTCAGCCGAGAACACCTGTTTCTTCACAGGGGAAGTAAGCTAGAGTCAGTAGGGATGCTGAAGGTGCTCTaGCTCTGTAGGGTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: LSREHLFLHRGSKLESVGMLKVL*LCRVAH
Trigger: GTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCAT...CCCTACTGACTCTAGCTTACTTCCCCTGTGAAGAAACAGGTGTTCTCGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCATCCGAGACAGCACGCTaGGCTTCTGGCTGGTCACCG +
Preference number: 5 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSSETAR*ASGWSP
Trigger: CGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGA...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGACACGGCAGTGTGGTGTaGACCACGGACACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRHGSVV*TTDTGS
Trigger: GCTGCCCGTGTCCGTGGTCAACACCACACTGCCGTG...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCGCCTCATCGGGGACCTaGGCAAGGCTACTATCGCTG +
Preference number: 5 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLASSGT*ARLLSL
Trigger: CAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGC...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAACCCAGGATGCCCACTTaGGGGGCCTCATCGGGGACC +
Preference number: 5 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKPRMPT*GASSGT
Trigger: GGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGG...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTCTCCCCACCACCACTTaGAAGCCAGAGCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVLPTTT*KPEPTR
Trigger: CCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAG...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACATCCACCAGGATCTaGCCCGCCAGCTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTTSTRI*PASWSL
Trigger: CAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGT...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGATGCTGAAGGTGCTCTaGCTCTGTAGGGTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPMLKVL*LCRVAH
Trigger: GTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCAT...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCAGGCAGAGATGACATaGAAGGCCTTGACCACTGTG +
Preference number: 5 (lower is better)
Translates to: ADAPSVPIYETSFCRSALQAEMT*KALTTV
Trigger: CACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAATCCGAGACAGCACGCTaGGCTTCTGGCTGGTCACCG +
Preference number: 5 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKSETAR*ASGWSP
Trigger: CGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGA...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGCTGAACTCCCTCCAGTaGAGCGAGTTTGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: ADAPSVPIYETSFCRSALLNSLQ*SEFAMD
Trigger: GTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAG...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGGGAATCGATGGGCCCTaGTTATGCCAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: GKEITLVPKPGSLMALERGIDGP*LCQGNA
Trigger: AGCATTGCCTTGGCATAACAAGGGCCCATCGATTCC...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GCTGATGCTCCATCAGTGCCAATTTATGAGACAAGTTTCTGCCGCTCAGCCTTGGTCGTTGAGGCACTTTaGTACCCAGAGGCACATGGA +
Preference number: 5 (lower is better)
Translates to: ADAPSVPIYETSFCRSALVVEAL*YPEAHG
Trigger: TCCATGTGCCTCTGGGTACAAAAGTGCCTCAACGAC...CAAGGCTGAGCGGCAGAAACTTGTCTCATAAATTGGCACTGATGGAGCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCATCTCTTCTGGCATTTaGGTGGCTCTGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLISSGI*VALRPA
Trigger: GGCGGGCCGCAGAGCCACCAAAATGCCAGAAGAGAT...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS-3UTR CAA 90 bp CATACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTGCCTCATCGGGGACCTaGGCAAGGCTACTATCGCTG +
Preference number: 5 (lower is better)
Translates to: HTFESQEFGPQTSYLHTVASSGT*ARLLSL
Trigger: CAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGC...AACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACGCCTCATCGGGGACCTaGGCAAGGCTACTATCGCTG +
Preference number: 5 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYASSGT*ARLLSL
Trigger: CAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGC...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGCTCACTGCCTCCTCTaGGAAAGTCACTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKAHCLL*ESHLGR
Trigger: GCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGC...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAAGGAGAAACAGGGCTTaGGCCAGGATGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSRRNRA*ARMTTQ
Trigger: CTGCGTCGTCATCCTGGCCAAAGCCCTGTTTCTCCT...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGAGGAGAAACAGGGCTTaGGCCAGGATGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLRRNRA*ARMTTQ
Trigger: CTGCGTCGTCATCCTGGCCAAAGCCCTGTTTCTCCT...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GATAAATCGAACCCACCACAGCACAAGCCTCTTCTGTACAAAAAGTGTGTGTATGTGGGCAGCGTGAACTaGATGGTGCTCTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: DKSNPPQHKPLLYKKCVYVGSVN*MVLSLS
Trigger: GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCAC...ATACACACACTTTTTGTACAGAAGAGGCTTGTGCTGTGGTGGGTTCGATTTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAATTGGTGGGTCTCCATaGCCCATGCTCTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: CTQLYHFAPPRKENLTGSIGGSP*PMLSLP
Trigger: AGGCAGGGAGAGCATGGGCAATGGAGACCCACCAAT...TGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAGCCAGCATGCCACTGTaGGCTGCACGCATCCTGCAT +
Preference number: 5 (lower is better)
Translates to: PQTSYLHTVIPLCTTKKRASMPL*AARILH
Trigger: ATGCAGGATGCGTGCAGCCAACAGTGGCATGCTGGC...TCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAATCTCTTCTGGCATTTaGGTGGCTGGGTGTGTTGGC +
Preference number: 5 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRAISSGI*VAGCVG
Trigger: GCCAACACACCCAGCCACCAAAATGCCAGAAGAGAT...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS-3UTR CAA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGAGCCTGGCTGTGCGTTaGGGGTTGCGGCTCCCCACC +
Preference number: 5 (lower is better)
Translates to: SSLNVRHLFLNLQVEISESLAVR*GLRLPT
Trigger: GGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCT...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAATGCTGAAGGTGCTCTaGCTCTGTAGGGTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRAMLKVL*LCRVAH
Trigger: GTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCAT...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCAACGGACACGGGCAGCTaGAAGAACTTGTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRATDTGS*KNLFWL
Trigger: AAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGT...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTCACGGCAGTGTGGTGTaGACCACGGACACGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVHGSVV*TTDTGS
Trigger: GCTGCCCGTGTCCGTGGTCAACACCACACTGCCGTG...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCAGAGGTGGCTCTTGTaGGCCAAGACCTGCTTGACT +
Preference number: 5 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLQRWLL*AKTCLT
Trigger: AGTCAAGCAGGTCTTGGCCAACAAGAGCCACCTCTG...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACTGAACTCCCTCCAGTaGAGCGAGTTTGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: TVIPLCTTKKRKPNGLRALNSLQ*SEFAMD
Trigger: GTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAG...TGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp AGGTGGCACCTGTTCCCTCCTGCCACCCACCTTATAATTGCTTCCCTCTTGAGCAAGACCTCACCCTCTTaGTCTTCAAAGATGCTTTTT +
Preference number: 5 (lower is better)
Translates to: RWHLFPPATHLIIASLLSKTSPS*SSKMLF
Trigger: AAAAAGCATCTTTGAAGACAAAGAGGGTGAGGTCTT...GCTCAAGAGGGAAGCAATTATAAGGTGGGTGGCAGGAGGGAACAGGTGCCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACACATCCACCAGGATCTaGCCCGCCAGCTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: KPPICTQLYHFAPPRKENTSTRI*PASWSL
Trigger: CAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGT...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTTCCGAGACAGCACGCTaGGCTTCTGGCTGGTCACCG +
Preference number: 5 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVSETAR*ASGWSP
Trigger: CGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGA...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCACGGACACGGGCAGCTaGAAGAACTTGTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLTDTGS*KNLFWL
Trigger: AAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGT...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTTTGGCCAAGACCTGCTaGACTGCCAGGTTGACCAGG +
Preference number: 5 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPLAKTC*TARLTR
Trigger: CCTGGTCAACCTGGCAGTCAAGCAGGTCTTGGCCAA...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCAGGGCACCGTTTAGGTTTGTAGCTTaGGTGGAAAAGTTGCTCCCC +
Preference number: 5 (lower is better)
Translates to: VIPLCTTKKRKPNGLRAPFRFVA*VEKLLP
Trigger: GGGGAGCAACTTTTCCACCAAAGCTACAAACCTAAA...CGGTGCCCTGAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCCCTAATGAGCTATCCTaGCAGTGGGCTCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLPNELS*QWALLL
Trigger: CAGGAGAAGAGCCCACTGCAAGGATAGCTCATTAGG...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCTCTTCTGCCGCTCAGCCTaGGCACAGCAGATGGAAAAT +
Preference number: 5 (lower is better)
Translates to: LHTVIPLCTTKKRKPNGLFCRSA*AQQMEN
Trigger: ATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAA...GAGCCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAATTGGTGGGTCTCCATaGCCCATGCTCTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIIGGSP*PMLSLP
Trigger: AGGCAGGGAGAGCATGGGCAATGGAGACCCACCAAT...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCTTCCTGCACTGGAAGTaGCCACACACTGAACGAAGC +
Preference number: 5 (lower is better)
Translates to: QEFGPQTSYLHTVIPLCTFLHWK*PHTERS
Trigger: GCTTCGTTCAGTGTGTGGCAACTTCCAGTGCAGGAA...GGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS-3UTR CAA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCAGGCAGAGATGACATaGAAGGCCTTGACCACTGTG +
Preference number: 5 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYQAEMT*KALTTV
Trigger: CACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTG...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGTCCGAGACAGCACGCTaGGCTTCTGGCTGGTCACCG +
Preference number: 5 (lower is better)
Translates to: SSLNVRHLFLNLQVEISESETAR*ASGWSP
Trigger: CGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGA...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGCAGAGGTGGCTCTTGTaGGCCAAGACCTGCTTGACT +
Preference number: 5 (lower is better)
Translates to: PICTQLYHFAPPRKENLTQRWLL*AKTCLT
Trigger: AGTCAAGCAGGTCTTGGCCAACAAGAGCCACCTCTG...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGGGCAGAGGTGGCTCTTGTaGGCCAAGACCTGCTTGACT +
Preference number: 5 (lower is better)
Translates to: YLHTVIPLCTTKKRKPNGQRWLL*AKTCLT
Trigger: AGTCAAGCAGGTCTTGGCCAACAAGAGCCACCTCTG...CCCGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp AAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACAGGAGAAACAGGGCTTaGGCCAGGATGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: KPPICTQLYHFAPPRKENRRNRA*ARMTTQ
Trigger: CTGCGTCGTCATCCTGGCCAAAGCCCTGTTTCTCCT...GTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTAGTGGGCAGCGTGAACTaGATGGTGCTCTCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLVGSVN*MVLSLS
Trigger: GGAGAGGGAGAGCACCATCAAGTTCACGCTGCCCAC...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TTAGATATCAACCTCAGACTGTGGCATTTGGGATTTCCAGAGCATGTCGTTGAGGGAAGGAAATTACACTaGTTCCCAAGCCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: LDINLRLWHLGFPEHVVEGRKLH*FPSQAH
Trigger: GTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCC...CTCAACGACATGCTCTGGAAATCCCAAATGCCACAGTCTGAGGTTGATATCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACGGAATCGATGGGCCCTaGTTATGCCAAGGCAATGCT +
Preference number: 5 (lower is better)
Translates to: HLSPRNLDLKPPICTQLYGIDGP*LCQGNA
Trigger: AGCATTGCCTTGGCATAACAAGGGCCCATCGATTCC...GTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCTCAGACTGTGGCATTaGGGATTTCCAGAGCATGTC +
Preference number: 5 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLLRLWH*GFPEHV
Trigger: GACATGCTCTGGAAATCCCAAATGCCACAGTCTGAG...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp ACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTACGGACACGGGCAGCTaGAAGAACTTGTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: TSYLHTVIPLCTTKKRKPTDTGS*KNLFWL
Trigger: AAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGT...AGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGCTGAACTCCCTCCAGTaGAGCGAGTTTGCAATGGAC +
Preference number: 5 (lower is better)
Translates to: PICTQLYHFAPPRKENLTLNSLQ*SEFAMD
Trigger: GTCCATTGCAAACTCGCTCAACTGGAGGGAGTTCAG...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACGGACACGGGCAGCTaGAAGAACTTGTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKTDTGS*KNLFWL
Trigger: AAGCCAGAACAAGTTCTTCAAGCTGCCCGTGTCCGT...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCAGGAGAAACAGGGCTTaGGCCAGGATGACGACGCAG +
Preference number: 5 (lower is better)
Translates to: ICSSLNVRHLFLNLQVEIRRNRA*ARMTTQ
Trigger: CTGCGTCGTCATCCTGGCCAAAGCCCTGTTTCTCCT...GATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGTCTGCCAGAGGACATTaGGAGTCCCCAATATTTTTC +
Preference number: 5 (lower is better)
Translates to: VPGIWTSNLLFAHSYTTLSARGH*ESPIFF
Trigger: GAAAAATATTGGGGACTCCAAATGTCCTCTGGCAGA...CAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGTTCCAGAGCATGTCGTaGAGGCACTTTTGTACCCAG +
Preference number: 5 (lower is better)
Translates to: PICTQLYHFAPPRKENLTFQSMS*RHFCTQ
Trigger: CTGGGTACAAAAGTGCCTCAACGACATGCTCTGGAA...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp GGGAAGGAAATTACACTTGTTCCCAAGCCAGGCTCACTAATGGCTCTGGAAAGGAGGTTAGGTGTTTATTaGCACTGCTTTTATACTGTC +
Preference number: 5 (lower is better)
Translates to: GKEITLVPKPGSLMALERRLGVY*HCFYTV
Trigger: GACAGTATAAAAGCAGTGCAAATAAACACCTAACCT...CCTTTCCAGAGCCATTAGTGAGCCTGGCTTGGGAACAAGTGTAATTTCCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAACCTAACGCAGACTCAAGTCTCTTaGCTACAGGAACTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: PICTQLYHFAPPRKENLTQTQVS*LQELRW
Trigger: CCACCTCAGTTCCTGTAGCAAAGAGACTTGAGTCTG...CGTTAGGTTTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp TCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAGAAAATCTCTTCTGGCATTTaGGTGGCAACAGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SNLLFAHSYTTLHHQEKKISSGI*VATAGW
Trigger: CCAGCCTGCTGTTGCCACCAAAATGCCAGAAGAGAT...TTTCTTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp AGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTTTCTGCCGCTCAGCCTaGGCACAGCAGATGGAAAAT +
Preference number: 5 (lower is better)
Translates to: SMICSSLNVRHLFLNLQVFCRSA*AQQMEN
Trigger: ATTTTCCATCTGCTGTGCCAAGGCTGAGCGGCAGAA...AACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATATCTGCCAGAGGACATTaGGAGTCCCCAATATTTTTC +
Preference number: 5 (lower is better)
Translates to: TFESQEFGPQTSYLHTVISARGH*ESPIFF
Trigger: GAAAAATATTGGGGACTCCAAATGTCCTCTGGCAGA...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACTCAGACTGTGGCATTaGGGATTTCCAGAGCATGTC +
Preference number: 5 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLLRLWH*GFPEHV
Trigger: GACATGCTCTGGAAATCCCAAATGCCACAGTCTGAG...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGGTGACTGATGCTTGGTaGGAGAGTGCACTGAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEVTDAW*ESALRE
Trigger: CTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCAC...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS-3UTR CAA 90 bp TCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTACAAGTTGAAATCTCAGAGGGCAGCTTGAAGAACTaGTTCTGGCTTTCCTGCACA +
Preference number: 5 (lower is better)
Translates to: SSLNVRHLFLNLQVEISEGSLKN*FWLSCT
Trigger: TGTGCAGGAAAGCCAGAACAAGTTCTTCAAGCTGCC...CTCTGAGATTTCAACTTGTAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp GACCTCAAACCTCCTATTTGCACACAGTTATACCACTTTGCACCACCAAGAAAAAAGACCTCACCCTCTTaGTCTTCAAAGATGCTTTTT +
Preference number: 5 (lower is better)
Translates to: DLKPPICTQLYHFAPPRKKTSPS*SSKMLF
Trigger: AAAAAGCATCTTTGAAGACAAAGAGGGTGAGGTCTT...TTTTCTTGGTGGTGCAAAGTGGTATAACTGTGTGCAAATAGGAGGTTTGAGGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS-3UTR CAA 90 bp CACAATAGCATGATCTGCTCTTCTCTTAACGTACGGCACTTGTTTTTAAATCTATTGAGTCCCAGGAATTaGGACCTCAAACCTCCTATT +
Preference number: 5 (lower is better)
Translates to: HNSMICSSLNVRHLFLNLLSPRN*DLKPPI
Trigger: AATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAA...TAGATTTAAAAACAAGTGCCGTACGTTAAGAGAAGAGCAGATCATGCTATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS-3UTR CAA 90 bp ACATTTGAGTCCCAGGAATTTGGACCTCAAACCTCCTATTTGCACACAGTTATAAGGTTAGGTGTTTATTaGCACTGCTTTTATACTGTC +
Preference number: 5 (lower is better)
Translates to: TFESQEFGPQTSYLHTVIRLGVY*HCFYTV
Trigger: GACAGTATAAAAGCAGTGCAAATAAACACCTAACCT...TATAACTGTGTGCAAATAGGAGGTTTGAGGTCCAAATTCCTGGGACTCAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393106.6
ENST00000393110.7
CDS GCA 72 bp AGTGGTCCAGCCAGTCGGGGAAGCGCTGGTACTTGGTaGCGCGCCGCAGCTGCAGGGCAGCCGCCAGCACGC +
Preference number: 6 (lower is better)
Translates to: SGPASRGSAGTW*RAAAAGQPPAR
Trigger: GCGTGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 72 bp GCCAGTGGTCCAGCCAGTCGGGGAAGCGCTGGTACTTaGTGCCGCGCCGCAGCTGCAGGGCAGCCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: ASGPASRGSAGT*CRAAAAGQPPA
Trigger: TGCTGGCGGCTGCCCTGCAGCTGCGGCGCGGCACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 72 bp TCGGTTTCTCAGGAGGCGAGGGCCCTGCCAGGGTCTTaGACAGCCAGCTGCCTCCCGCAGCCTGCACGCCAG +
Preference number: 6 (lower is better)
Translates to: SVSQEARALPGS*TASCLPQPARQ
Trigger: CTGGCGTGCAGGCTGCGGGAGGCAGCTGGCTGTGCAAGACCCTGGCAGGGCCCTCGCCTCCTGAGAAACCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CAA 90 bp AGGGCGTGCAGGGCGGCGCAGAAGAAGCTGAGCAGCCCGATCTGCTaGCGGTGCTGTAGCCAGTGGTCCAGCCAGTCGGGGAAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: RACRAAQKKLSSPIC*RCCSQWSSQSGKRW
Trigger: CCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCACGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp GGGTCTTGCACAGCCAGCTGCCTCCCGCAGCCTGCACGCCAGCTCTaGGCCACAGGGGCTGGACCGGGAGTGGTGACTGATGCTTGGTTG +
Preference number: 6 (lower is better)
Translates to: GSCTASCLPQPARQL*ATGAGPGVVTDAWL
Trigger: CAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGTGGCCAAGAGCTGGCGTGCAGGCTGCGGGAGGCAGCTGGCTGTGCAAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS TCA 72 bp CTGTGCGTTTGGGGTTGCGGCTCCCCACCACCACTTTaGAGCCAGAGCCCACCAGGCGTGTGGCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: LCVWGCGSPPPL*SQSPPGVWPGS
Trigger: GCTCCCTGGCCACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 72 bp CCCAGGCTGACGCCAGGGATCCCATGTCCACGGGCATaGAGCCCATGGCGAGCGCCATCTCCGAGACAGCAC +
Preference number: 6 (lower is better)
Translates to: PRLTPGIPCPRA*SPWRAPSPRQH
Trigger: GTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGGGATCCCTGGCGTCAGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp GCTGTGCGTTTGGGGTTGCGGCTCCCCACCACCACTTaGAAGCCAGAGCCCACCAGGCGTGTGGCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: AVRLGLRLPTTT*KPEPTRRVARE
Trigger: CTCCCTGGCCACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp AGGGCGGCGCAGAAGAAGCTGAGCAGCCCGATCTGCTaGCGGTGCTGTAGCCAGTGGTCCAGCCAGTCGGGG +
Preference number: 6 (lower is better)
Translates to: RAAQKKLSSPIC*RCCSQWSSQSG
Trigger: CCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp AACAGCCTGGCTGTGCGTTTGGGGTTGCGGCTCCCCACCACCACTTaGAAGCCAGAGCCCACCAGGCGTGTGGCCAGGGAGCGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: NSLAVRLGLRLPTTT*KPEPTRRVARERAK
Trigger: CTTTGCCCGCTCCCTGGCCACACGCCTGGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 72 bp GCGCAGAAGAAGCTGAGCAGCCCGATCTGCTTGCGGTaGTGTAGCCAGTGGTCCAGCCAGTCGGGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: AQKKLSSPICLR*CSQWSSQSGKR
Trigger: GCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 72 bp TGCAGGGCGGCGCAGAAGAAGCTGAGCAGCCCGATCTaGTTGCGGTGCTGTAGCCAGTGGTCCAGCCAGTCG +
Preference number: 6 (lower is better)
Translates to: CRAAQKKLSSPI*LRCCSQWSSQS
Trigger: CGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAGCTTCTTCTGCGCCGCCCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 72 bp TGGACGGCAGTGAGGTCACGGCCAGCAGGGACAACGTaGCGAGGGCCAGCACTCCCAGGGAGAGGTAGATCT +
Preference number: 6 (lower is better)
Translates to: WTAVRSRPAGTT*RGPALPGRGRS
Trigger: AGATCTACCTCTCCCTGGGAGTGCTGGCCCTCGGCACGTTGTCCCTGCTGGCCGTGACCTCACTGCCGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 72 bp GGCGAGCGCCATCTCCGAGACAGCACGCTTGGCTTCTaGCTGGTCACCGCAGATGGGCACCTGCCTGTTACC +
Preference number: 6 (lower is better)
Translates to: GERHLRDSTLGF*LVTADGHLPVT
Trigger: GGTAACAGGCAGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp AAGCCCATGGCGAGCGCCATCTCCGAGACAGCACGCTaGGCTTCTGGCTGGTCACCGCAGATGGGCACCTGC +
Preference number: 6 (lower is better)
Translates to: KPMASAISETAR*ASGWSPQMGTC
Trigger: GCAGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 72 bp CTCCCTCCAGTTGAGCGAGTTTGCAATGGACGGCAGTaGGGTCACGGCCAGCAGGGACAACGTGCCGAGGGC +
Preference number: 6 (lower is better)
Translates to: LPPVERVCNGRQ*GHGQQGQRAEG
Trigger: GCCCTCGGCACGTTGTCCCTGCTGGCCGTGACCTCACTGCCGTCCATTGCAAACTCGCTCAACTGGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 72 bp GTGGCAACAGCAGGCTGGTGCGACATCCGGCTGACGTaGGGGTCTGAGGCTCTCAGGTCACTCGACAGCCTC +
Preference number: 6 (lower is better)
Translates to: VATAGWCDIRLT*GSEALRSLDSL
Trigger: GAGGCTGTCGAGTGACCTGAGAGCCTCAGACCCTCACGTCAGCCGGATGTCGCACCAGCCTGCTGTTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CCA 72 bp CCAGGATGCCCACTTTGGGGGCCTCATCGGGGACCTTaGCAAGGCTACTATCGCTGTCCACCAGGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: PGCPLWGPHRGP*QGYYRCPPGGG
Trigger: GCCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 72 bp CTGAGCAGCCCGATCTGCTTGCGGTGCTGTAGCCAGTaGTCCAGCCAGTCGGGGAAGCGCTGGTACTTGGTG +
Preference number: 6 (lower is better)
Translates to: LSSPICLRCCSQ*SSQSGKRWYLV
Trigger: CACCAAGTACCAGCGCTTCCCCGACTGGCTGGACCACTGGCTACAGCACCGCAAGCAGATCGGGCTGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CCA 72 bp GCCACAGGGGCTGGACCGGGAGTGGTGACTGATGCTTaGTTGGAGAGTGCACTGAGAGAGCGCAGCTCTGGC +
Preference number: 6 (lower is better)
Translates to: ATGAGPGVVTDA*LESALRERSSG
Trigger: GCCAGAGCTGCGCTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CAA 72 bp CCCAGGATGCCCACTTTGGGGGCCTCATCGGGGACCTaGGCAAGGCTACTATCGCTGTCCACCAGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: PRMPTLGASSGT*ARLLSLSTRWR
Trigger: CCTCCACCTGGTGGACAGCGATAGTAGCCTTGCCAAGGTCCCCGATGAGGCCCCCAAAGTGGGCATCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp ACGGGCATGAAGCCCATGGCGAGCGCCATCTCCGAGACAGCACGCTaGGCTTCTGGCTGGTCACCGCAGATGGGCACCTGCCTGTTACCA +
Preference number: 6 (lower is better)
Translates to: TGMKPMASAISETAR*ASGWSPQMGTCLLP
Trigger: TGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCTCGCCATGGGCTTCATGCCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp TGGAAAGTCACTTGGGCCGCTGAGGGAAACAGCCTGGCTGTGCGTTaGGGGTTGCGGCTCCCCACCACCACTTTGAAGCCAGAGCCCACC +
Preference number: 6 (lower is better)
Translates to: WKVTWAAEGNSLAVR*GLRLPTTTLKPEPT
Trigger: GGTGGGCTCTGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp CTCTTGGCCACAGGGGCTGGACCGGGAGTGGTGACTGATGCTTGGTaGGAGAGTGCACTGAGAGAGCGCAGCTCTGGCCTGCTGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LLATGAGPGVVTDAW*ESALRERSSGLLLP
Trigger: AGGAAGCAGCAGGCCAGAGCTGCGCTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGTGGCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS TCA 72 bp GCTCTTGGCCACAGGGGCTGGACCGGGAGTGGTGACTaGTGCTTGGTTGGAGAGTGCACTGAGAGAGCGCAG +
Preference number: 6 (lower is better)
Translates to: ALGHRGWTGSGD*CLVGECTERAQ
Trigger: CTGCGCTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGTGGCCAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CCA 72 bp AGCGCCATCTCCGAGACAGCACGCTTGGCTTCTGGCTaGTCACCGCAGATGGGCACCTGCCTGTTACCATCC +
Preference number: 6 (lower is better)
Translates to: SAISETARLASG*SPQMGTCLLPS
Trigger: GGATGGTAACAGGCAGGTGCCCATCTGCGGTGACCAGCCAGAAGCCAAGCGTGCTGTCTCGGAGATGGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp ACTTGGGCCGCTGAGGGAAACAGCCTGGCTGTGCGTTaGGGGTTGCGGCTCCCCACCACCACTTTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: TWAAEGNSLAVR*GLRLPTTTLKP
Trigger: TGGCTTCAAAGTGGTGGTGGGGAGCCGCAACCCCAAACGCACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp ACAGGGGCTGGACCGGGAGTGGTGACTGATGCTTGGTaGGAGAGTGCACTGAGAGAGCGCAGCTCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: TGAGPGVVTDAW*ESALRERSSGL
Trigger: CAGGCCAGAGCTGCGCTCTCTCAGTGCACTCTCCAACCAAGCATCAGTCACCACTCCCGGTCCAGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CCA 72 bp TCCGGGGAGCTCACTGCCTCCTCTTGGAAAGTCACTTaGGCCGCTGAGGGAAACAGCCTGGCTGTGCGTTTG +
Preference number: 6 (lower is better)
Translates to: SGELTASSWKVT*AAEGNSLAVRL
Trigger: CAAACGCACAGCCAGGCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp GCCTGCAGGGTCCAGGCAGAGATGACATTGAAGGCCTaGACCACTGTGCAAGTGGGGAAGAGGGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: ACRVQAEMTLKA*TTVQVGKREAR
Trigger: CCTGGCCTCCCTCTTCCCCACTTGCACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTGGACCCTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp TTACCATCCCTTGGGCCAGCCTGCAGGGTCCAGGCAGAGATGACATaGAAGGCCTTGACCACTGTGCAAGTGGGGAAGAGGGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LPSLGPACRVQAEMT*KALTTVQVGKREAR
Trigger: CCTGGCCTCCCTCTTCCCCACTTGCACAGTGGTCAAGGCCTTCAATGTCATCTCTGCCTGGACCCTGCAGGCTGGCCCAAGGGATGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp GCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTGATCAGTGGCTaGTCCATCTCTTCTGGCATTTTGGTGGCTCTGCGGCCCGCCGCT +
Preference number: 6 (lower is better)
Translates to: ARLLSLSTRWRLISG*SISSGILVALRPAA
Trigger: AGCGGCGGGCCGCAGAGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393107.2
ENST00000409811.5
CDS TCA 72 bp TTTTGGTGGCAACAGCAGGCTGGTGCGACATCCGGCTaGCGTGAGGGTCTGAGGCTCTCAGGTCACTCGACA +
Preference number: 6 (lower is better)
Translates to: FWWQQQAGATSG*REGLRLSGHST
Trigger: TGTCGAGTGACCTGAGAGCCTCAGACCCTCACGTCAGCCGGATGTCGCACCAGCCTGCTGTTGCCACCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CCA 72 bp ACTCGACAGCCTCACCGTGAGGTGAGCCACCCTTTCTaGCTCAGTCTCCAACCAGGACAGCCTGGCTTTGGT +
Preference number: 6 (lower is better)
Translates to: TRQPHREVSHPF*LSLQPGQPGFG
Trigger: ACCAAAGCCAGGCTGTCCTGGTTGGAGACTGAGCCAGAAAGGGTGGCTCACCTCACGGTGAGGCTGTCGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CAA 90 bp GGAGGCCAGGTACTCAGCATTGGACTCACGATGCTGAAGGTGCTCTaGCTCTGTAGGGTTGCTCACATCCACCAGGATCTTGCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: GGQVLSIGLTMLKVL*LCRVAHIHQDLARQ
Trigger: CTGGCGGGCAAGATCCTGGTGGATGTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp ACACAGGCACAAGTGAGCAGCAGAAGCTCCGAGGGCCTAGGAAACTaGTCTGATGATGCGGGGCAGGTAAGTGGGGGTCTTGGGACTGAG +
Preference number: 6 (lower is better)
Translates to: TQAQVSSRSSEGLGN*SDDAGQVSGGLGTE
Trigger: CTCAGTCCCAAGACCCCCACTTACCTGCCCCGCATCATCAGACAAGTTTCCTAGGCCCTCGGAGCTTCTGCTGCTCACTTGTGCCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS CCA 72 bp ACAAAGATGACCTCCGGGGAGCTCACTGCCTCCTCTTaGAAAGTCACTTGGGCCGCTGAGGGAAACAGCCTG +
Preference number: 6 (lower is better)
Translates to: TKMTSGELTASS*KVTWAAEGNSL
Trigger: CAGGCTGTTTCCCTCAGCGGCCCAAGTGACTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 90 bp GCAAGGCTACTATCGCTGTCCACCAGGTGGAGGCTGATCAGTGGCTaGTCCATCTCTTCTGGCATTTTGGTGGCTGGGTGTGTTGGCACG +
Preference number: 6 (lower is better)
Translates to: ARLLSLSTRWRLISG*SISSGILVAGCVGT
Trigger: CGTGCCAACACACCCAGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393106.6
CDS TCA 72 bp GTGAAGAGTAGTGCTCCCGGAACACAGCCACAAAGATaGCCTCCGGGGAGCTCACTGCCTCCTCTTGGAAAG +
Preference number: 6 (lower is better)
Translates to: VKSSAPGTQPQR*PPGSSLPPLGK
Trigger: CTTTCCAAGAGGAGGCAGTGAGCTCCCCGGAGGTCATCTTTGTGGCTGTGTTCCGGGAGCACTACTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 72 bp TCACATCCACCAGGATCTTGCCCGCCAGCTGGTCACTaGGACTGCACAGTGAAGAGTAGTGCTCCCGGAACA +
Preference number: 6 (lower is better)
Translates to: SHPPGSCPPAGH*DCTVKSSAPGT
Trigger: TGTTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp CAAGTGAGCAGCAGAAGCTCCGAGGGCCTAGGAAACTaGTCTGATGATGCGGGGCAGGTAAGTGGGGGTCTT +
Preference number: 6 (lower is better)
Translates to: QVSSRSSEGLGN*SDDAGQVSGGL
Trigger: AAGACCCCCACTTACCTGCCCCGCATCATCAGACAAGTTTCCTAGGCCCTCGGAGCTTCTGCTGCTCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS TCA 72 bp GATCTTGCCCGCCAGCTGGTCACTGAGACTGCACAGTaGAGAGTAGTGCTCCCGGAACACAGCCACAAAGAT +
Preference number: 6 (lower is better)
Translates to: DLARQLVTETAQ*RVVLPEHSHKD
Trigger: ATCTTTGTGGCTGTGTTCCGGGAGCACTACTCTTCACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS TCA 72 bp AGGGAGGCCAGGTACTCAGCATTGGACTCACGATGCTaGAGGTGCTCTTGCTCTGTAGGGTTGCTCACATCC +
Preference number: 6 (lower is better)
Translates to: REARYSALDSRC*RCSCSVGLLTS
Trigger: GGATGTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAATGCTGAGTACCTGGCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS CAA 72 bp TCTTGCTCTGTAGGGTTGCTCACATCCACCAGGATCTaGCCCGCCAGCTGGTCACTGAGACTGCACAGTGAA +
Preference number: 6 (lower is better)
Translates to: SCSVGLLTSTRI*PASWSLRLHSE
Trigger: TTCACTGTGCAGTCTCAGTGACCAGCTGGCGGGCAAGATCCTGGTGGATGTGAGCAACCCTACAGAGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5
CDS GCA 72 bp TCGGGTTCCACTGCCTGTGTTTCCTGCACTGGAAGTTaGCACACACTGAACGAAGCTGAACTCCCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: SGSTACVSCTGS*HTLNEAELPPV
Trigger: AACTGGAGGGAGTTCAGCTTCGTTCAGTGTGTGGCAACTTCCAGTGCAGGAAACACAGGCAGTGGAACCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS GCA 72 bp GGTCTTGGGACTGAGATTCAGGTCTTCGGGTTCCACTaGCTGTGTTTCCTGCACTGGAAGTTGCCACACACT +
Preference number: 6 (lower is better)
Translates to: GLGTEIQVFGFH*LCFLHWKLPHT
Trigger: AGTGTGTGGCAACTTCCAGTGCAGGAAACACAGGCAGTGGAACCCGAAGACCTGAATCTCAGTCCCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS CCA 72 bp GCTACTATCGCTGTCCACCAGGTGGAGGCTGATCAGTaGCTTGTCCATCTCTTCTGGCATTTTGGTGGCAAC +
Preference number: 6 (lower is better)
Translates to: ATIAVHQVEADQ*LVHLFWHFGGN
Trigger: GTTGCCACCAAAATGCCAGAAGAGATGGACAAGCCACTGATCAGCCTCCACCTGGTGGACAGCGATAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393110.7
CDS CAA 72 bp AAGCCCAGTGAGGACTCAAAAGCCAGCATGCCACTGTaGGCTGCACGCATCCTGCATTTAACGTGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: KPSEDSKASMPL*AARILHLTCPA
Trigger: AGCTGGACACGTTAAATGCAGGATGCGTGCAGCCAACAGTGGCATGCTGGCTTTTGAGTCCTCACTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS TCA 72 bp CTGCCTGTGTTTCCTGCACTGGAAGTTGCCACACACTaGACGAAGCTGAACTCCCTCCAGTTGAGCGAGTTT +
Preference number: 6 (lower is better)
Translates to: LPVFPALEVATH*TKLNSLQLSEF
Trigger: AAACTCGCTCAACTGGAGGGAGTTCAGCTTCGTTCAGTGTGTGGCAACTTCCAGTGCAGGAAACACAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS GCA 72 bp AGATTCAGGTCTTCGGGTTCCACTGCCTGTGTTTCCTaGACTGGAAGTTGCCACACACTGAACGAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: RFRSSGSTACVS*TGSCHTLNEAE
Trigger: TTCAGCTTCGTTCAGTGTGTGGCAACTTCCAGTGCAGGAAACACAGGCAGTGGAACCCGAAGACCTGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409811.5
CDS CAA 72 bp GTACTCAGCATTGGACTCACGATGCTGAAGGTGCTCTaGCTCTGTAGGGTTGCTCACATCCACCAGGATCTT +
Preference number: 6 (lower is better)
Translates to: VLSIGLTMLKVL*LCRVAHIHQDL
Trigger: AAGATCCTGGTGGATGTGAGCAACCCTACAGAGCAAGAGCACCTTCAGCATCGTGAGTCCAATGCTGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393106.6
ENST00000393107.2
ENST00000393110.7
ENST00000409811.5