RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STEAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157214

Ensembl transcript IDs: ENST00000287908.7, ENST00000394621.7, ENST00000394622.6, ENST00000394626.5, ENST00000394629.2, ENST00000394632.5, ENST00000402625.6, ENST00000426158.1, ENST00000428074.5, ENST00000482369.1

Found 476 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCGTGGGATCTCAGCAATTTGTTAACACTGCTAGGGCCCTTCACTaGATAGGGAGGCATATGGACTGCCATGGGTCTCCAGGCTCATGT +
Preference number: 1 (lower is better)
Translates to: SVGSQQFVNTARALH*IGRHMDCHGSPGSC
Trigger: ACATGAGCCTGGAGACCCATGGCAGTCCATATGCCTCCCTATGCAGTGAAGGGCCCTAGCAGTGTTAACAAATTGCTGAGATCCCACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR CCA 90 bp CTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAG +
Preference number: 1 (lower is better)
Translates to: LVSNLPYSLGVALIL*RQLPGLLLYPQSQQ
Trigger: CTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
3UTR CCA 90 bp ACTTACCCTAATATCCTTCATGCTTGTAAAGTACTCCCTAATGAATaGTTATGCAGGCAGGAGAACTTCTCAGGAAGAGAAAAGGAGAAG +
Preference number: 1 (lower is better)
Translates to: TYPNILHACKVLPNE*LCRQENFSGREKEK
Trigger: CTTCTCCTTTTCTCTTCCTGAGAAGTTCTCCTGCCTGCATAACCATTCATTAGGGAGTACTTTACAAGCATGAAGGATATTAGGGTAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR GCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGCTAGGGCCCTTCACTaGATAGGGAGGCATATGGAC +
Preference number: 2 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAARALH*IGRHMD
Trigger: GTCCATATGCCTCCCTATGCAGTGAAGGGCCCTAGC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR CCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGCATATGGACTGCCATaGGTCTCCAGGCTCATGTTC +
Preference number: 2 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAAYGLP*VSRLMF
Trigger: GAACATGAGCCTGGAGACCCATGGCAGTCCATATGC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR TCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGTGGCCTCTGGAATATaGCTACCTGGACTTGAATGC +
Preference number: 2 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAVASGI*LPGLEC
Trigger: GCATTCAAGTCCAGGTAGTCATATTCCAGAGGCCAC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR CCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGCGACAAAGGTCAGCTaGCAGATTACTTGTGTGCAA +
Preference number: 2 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAATKVS*QITCVQ
Trigger: TTGCACACAAGTAATCTGCCAGCTGACCTTTGTCGC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR TCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTATGACTACCTGGACTTaGATGCTCACTCTGCCATTT +
Preference number: 2 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAMTTWT*MLTLPF
Trigger: AAATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCAT...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR TCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTCCAAGAACTAACAAGTaGTTCTCAAGTGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAPRTNK*FSSGEK
Trigger: TTTCTCCCCACTTGAGAATCACTTGTTAGTTCTTGG...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR CAA 90 bp ACTTCTCAGGAAGAGAAAAGGAGAAGACTAACTCTACAGAGATTTTaGAAAGACTCCGTGGGATCTCAGCAATTTGTTAACACTGCTAGG +
Preference number: 2 (lower is better)
Translates to: TSQEEKRRRLTLQRF*KDSVGSQQFVNTAR
Trigger: CCTAGCAGTGTTAACAAATTGCTGAGATCCCACGGAGTCTTTCAAAAATCTCTGTAGAGTTAGTCTTCTCCTTTTCTCTTCCTGAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR-3UTR CCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCATAGCAAGTGGTGACTaGTTAAGGTGCGACAAAGGT +
Preference number: 2 (lower is better)
Translates to: HLLTARPLKNNFSILRSLIASGD*LRCDKG
Trigger: ACCTTTGTCGCACCTTAACCAGTCACCACTTGCTAT...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR GCA 72 bp GCTAGGGCCCTTCACTGCATAGGGAGGCATATGGACTaGCATGGGTCTCCAGGCTCATGTTCCAAGCAAGAA +
Preference number: 3 (lower is better)
Translates to: ARALHCIGRHMD*HGSPGSCSKQE
Trigger: TTCTTGCTTGGAACATGAGCCTGGAGACCCATGGCAGTCCATATGCCTCCCTATGCAGTGAAGGGCCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR CCA 72 bp GGCCCTTCACTGCATAGGGAGGCATATGGACTGCCATaGGTCTCCAGGCTCATGTTCCAAGCAAGAATAGGG +
Preference number: 3 (lower is better)
Translates to: GPSLHREAYGLP*VSRLMFQARIG
Trigger: CCCTATTCTTGCTTGGAACATGAGCCTGGAGACCCATGGCAGTCCATATGCCTCCCTATGCAGTGAAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR GCA 72 bp TCTCAGCAATTTGTTAACACTGCTAGGGCCCTTCACTaGATAGGGAGGCATATGGACTGCCATGGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: SQQFVNTARALH*IGRHMDCHGSP
Trigger: TGGAGACCCATGGCAGTCCATATGCCTCCCTATGCAGTGAAGGGCCCTAGCAGTGTTAACAAATTGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR CCA 72 bp AATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTCCTGTTATATCCACAA +
Preference number: 3 (lower is better)
Translates to: NLPYSLGVALIL*RQLPGLLLYPQ
Trigger: TTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
3UTR GCA 72 bp CAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTTCATCTCACTGGCCAA +
Preference number: 3 (lower is better)
Translates to: QQQDEGMKKDTC*LPLRRLHLTGQ
Trigger: TTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
3UTR CCA 72 bp GTCAATAGGAAGACAAATTCCAGTTCCAGCTCAGTCTaGGTATCTGCAAAGCTGCAAAAGATCTTTAAAGAC +
Preference number: 3 (lower is better)
Translates to: VNRKTNSSSSSV*VSAKLQKIFKD
Trigger: GTCTTTAAAGATCTTTTGCAGCTTTGCAGATACCCAGACTGAGCTGGAACTGGAATTTGTCTTCCTATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
3UTR CCA 72 bp AATATCCTTCATGCTTGTAAAGTACTCCCTAATGAATaGTTATGCAGGCAGGAGAACTTCTCAGGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: NILHACKVLPNE*LCRQENFSGRE
Trigger: TTCTCTTCCTGAGAAGTTCTCCTGCCTGCATAACCATTCATTAGGGAGTACTTTACAAGCATGAAGGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDPPTGG*RVAAAA
Trigger: CGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDRLQGG*RGGRTP
Trigger: TGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCTGGCGGTTGCAGGGTaGCTGCCGCGGCGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGLAVAG*LPRRSH
Trigger: GTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACCCGCTAGGGGCTGCGTaGCCGGACAGCTCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDPLGAA*PDSSWR
Trigger: GCGCCACGAGCTGTCCGGGCACGCAGCCCCTAGCGG...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCGCGCCGCTAGGGGCTaGGTGCCCGGACAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKRAARG*VPGQLV
Trigger: CACGAGCTGTCCGGGCACGCAGCCCCTAGCGGCGCG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGCGCCGCTAGGGGCTaGGTGCCCGGACAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTRAARG*VPGQLV
Trigger: CACGAGCTGTCCGGGCACGCAGCCCCTAGCGGCGCG...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCA +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECRLQGG*RGGRTP
Trigger: TGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGCCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKPPTGG*RVAAAA
Trigger: CGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGG...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACTGGCGGTTGCAGGGTaGCTGCCGCGGCGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPLAVAG*LPRRSH
Trigger: GTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR CCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCTGGCGGTTGCAGGGTaGCTGCCGCGGCGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKLAVAG*LPRRSH
Trigger: GTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCCGCTAGGGGCTGCGTaGCCGGACAGCTCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLPLGAA*PDSSWR
Trigger: GCGCCACGAGCTGTCCGGGCACGCAGCCCCTAGCGG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCGCGCCGCTAGGGGCTaGGTGCCCGGACAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLRAARG*VPGQLV
Trigger: CACGAGCTGTCCGGGCACGCAGCCCCTAGCGGCGCG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCA +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKRLQGG*RGGRTP
Trigger: TGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPRLQGG*RGGRTP
Trigger: TGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKSPTGG*RVAAAA
Trigger: CGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDSPTGG*RVAAAA
Trigger: CGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTGCCCGGACAGCTCGTaGCGCCGAGGGCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHCPDSS*RRGPEE
Trigger: TTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGGGCA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCCCGGACAGCTCGTaGCGCCGAGGGCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNCPDSS*RRGPEE
Trigger: TTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGGGCA...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCTGGCGGTTGCAGGGTaGCTGCCGCGGCGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLLAVAG*LPRRSH
Trigger: GTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR TCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGGGCCCGAGGAACGCTaGCTGGAGTCGGGAAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPGPEER*LESGRA
Trigger: GGCTCTTCCCGACTCCAGTCAGCGTTCCTCGGGCCC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287908.7
CDS-3UTR GCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGRSHSS*FPAYPS
Trigger: GCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGRLQGG*RGGRTP
Trigger: TGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCG...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR CCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAAGTCGGGAAGAGCCGTaGAGCGCGGGGAGGAGTCGG +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTSREEP*SAGRSR
Trigger: CCGACTCCTCCCCGCGCTCCACGGCTCTTCCCGACT...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287908.7
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTGCCCGGACAGCTCGTaGCGCCGAGGGCCCGAGGAA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGCPDSS*RRGPEE
Trigger: TTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGGGCA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCCCGCCTACCCAAGCTaGATCGCGAACAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECPAYPS*IANSQG
Trigger: CCCCTGGCTGTTCGCGATCCAGCTTGGGTAGGCGGG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCGACTGCACCTCCGACTaGCGGTTGCAGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLDCTSD*RLQGGC
Trigger: GCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTC...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCGACTGCACCTCCGACTaGCGGTTGCAGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGDCTSD*RLQGGC
Trigger: GCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTC...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKVALIL*RQLPGL
Trigger: GAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCAC...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGCTTTGGGTGTGGCTTTaGTCCTCTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKLWVWL*SSGDSC
Trigger: GCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAG...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNRSHSS*FPAYPS
Trigger: GCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCG...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDRSHSS*FPAYPS
Trigger: GCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCG...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHRSHSS*FPAYPS
Trigger: GCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCG...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTCCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAPPTGG*RVAAAA
Trigger: CGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGG...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287908.7
ENST00000394621.7
CDS-3UTR GCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCCCAGGGCCTACGGACTaGACCTCCGACTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCPGPTD*TSDWRL
Trigger: CAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGG...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCCGAGGAACGCTGACTaGAGTCGGGAAGAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGPRNAD*SREEPW
Trigger: CCACGGCTCTTCCCGACTCCAGTCAGCGTTCCTCGG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287908.7
CDS-3UTR CCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGCCCGCCTACCCAAGCTaGATCGCGAACAGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKPAYPS*IANSQG
Trigger: CCCCTGGCTGTTCGCGATCCAGCTTGGGTAGGCGGG...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR TCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCTTTGGGTGTGGCTTTaGTCCTCTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDLWVWL*SSGDSC
Trigger: GCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGRSHSS*FPAYPS
Trigger: GCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCG...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR GCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGACCAGGGCCTACGGACTaGACCTCCGACTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRPGPTD*TSDWRL
Trigger: CAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGG...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCCAGGGCCTACGGACTaGACCTCCGACTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLPGPTD*TSDWRL
Trigger: CAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGCTAGGGCCCTTCACTaGATAGGGAGGCATATGGAC +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDARALH*IGRHMD
Trigger: GTCCATATGCCTCCCTATGCAGTGAAGGGCCCTAGC...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGTCCTCTGGAGACAGCTaGCAGGGCTCCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKSSGDS*QGSCYI
Trigger: GATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGGACTGCACCTCCGACTaGCGGTTGCAGGGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGDCTSD*RLQGGC
Trigger: GCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTC...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR TCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGTCCTTAGGTCCTAACTaGAGTGCCCAAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKSLGPN*SAQAET
Trigger: TGTCTCAGCTTGGGCACTTCAGTTAGGACCTAAGGA...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGVALIL*RQLPGL
Trigger: GAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCAC...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCATGCTGCCTTCCTTTaGGGAGACTTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDHAAFL*GDFISL
Trigger: CAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCTTTGGGTGTGGCTTTaGTCCTCTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGLWVWL*SSGDSC
Trigger: GCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGGGAGGCATATGGACTaGCATGGGTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPGRHMD*HGSPGS
Trigger: TGAGCCTGGAGACCCATGGCAGTCCATATGCCTCCC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAGGGAGGCATATGGACTaGCATGGGTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTGRHMD*HGSPGS
Trigger: TGAGCCTGGAGACCCATGGCAGTCCATATGCCTCCC...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCGGGACAATGTCTCCTTaGCTTCTTTCTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLGTMSP*LLSPGP
Trigger: GGGCCCAGGAGAAAGAAGGCAAGGAGACATTGTCCC...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGTATAGCTACCACCACTaGCCCTCTCCAGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKYSYHH*PSPESK
Trigger: TTTACTCTCTGGAGAGGGCCAGTGGTGGTAGCTATA...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPVALIL*RQLPGL
Trigger: GAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCAC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKVALIL*RQLPGL
Trigger: GAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCAC...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCTTTGGGTGTGGCTTTaGTCCTCTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKLWVWL*SSGDSC
Trigger: GCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTGGGAGGCATATGGACTaGCATGGGTCTCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLGRHMD*HGSPGS
Trigger: TGAGCCTGGAGACCCATGGCAGTCCATATGCCTCCC...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGGCTAGGGCCCTTCACTaGATAGGGAGGCATATGGAC +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKARALH*IGRHMD
Trigger: GTCCATATGCCTCCCTATGCAGTGAAGGGCCCTAGC...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAGGGACAATGTCTCCTTaGCTTCTTTCTCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTGTMSP*LLSPGP
Trigger: GGGCCCAGGAGAAAGAAGGCAAGGAGACATTGTCCC...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACACTGGCGGTTGCAGGGTaGCTGCCGCGGCGGTCGCAC +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTLAVAG*LPRRSH
Trigger: GTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAG...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394632.5
CDS-3UTR CCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATTATAGCTACCACCACTaGCCCTCTCCAGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDYSYHH*PSPESK
Trigger: TTTACTCTCTGGAGAGGGCCAGTGGTGGTAGCTATA...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATAGCAAGTGGTGACTaGTTAAGGTGCGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKIASGD*LRCDKG
Trigger: ACCTTTGTCGCACCTTAACCAGTCACCACTTGCTAT...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAGACTTCATCTCACTaGCCAACACTCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDETSSH*PTLSHM
Trigger: CATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTC...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCTCCTTAGGTCCTAACTaGAGTGCCCAAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLSLGPN*SAQAET
Trigger: TGTCTCAGCTTGGGCACTTCAGTTAGGACCTAAGGA...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGACCTGTTGTCGCGCTTaGATATTGTTGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKTCCRA*ILLLHI
Trigger: TATATGCAGCAACAATATTCAAGCGCGACAACAGGT...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCTCCGGGGAGACATaGGGAATTGTTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTLSGET*GIVPPI
Trigger: TATGGGAGGAACAATTCCTCATGTCTCCCCGGAGAG...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGTCATCACATTACTGTaGCCCTCTCCGGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKVITLL*PSPGRH
Trigger: ATGTCTCCCCGGAGAGGGTCACAGTAATGTGATGAC...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCATGCTGCCTTCCTTTaGGGAGACTTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECHAAFL*GDFISL
Trigger: CAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATGCTGCCTTCCTTTaGGGAGACTTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGHAAFL*GDFISL
Trigger: CAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGACTTTGGGTGTGGCTTTaGTCCTCTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRLWVWL*SSGDSC
Trigger: GCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAG...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCTTTGGGTGTGGCTTTaGTCCTCTGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGLWVWL*SSGDSC
Trigger: GCAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAG...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAGGTGACTGGTTAAGGTaGGACAAAGGTCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTGDWLR*DKGQLA
Trigger: TGCCAGCTGACCTTTGTCGCACCTTAACCAGTCACC...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACGGTGACTGGTTAAGGTaGGACAAAGGTCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNGDWLR*DKGQLA
Trigger: TGCCAGCTGACCTTTGTCGCACCTTAACCAGTCACC...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTCCTCTGGAGACAGCTaGCAGGGCTCCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPSSGDS*QGSCYI
Trigger: GATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATTTCTGGTCTCTAATCTaGCTTACTCTTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDFWSLI*LTLWVW
Trigger: CCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAA...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGGGTTTCCAACCAAGGTaGAAATCTCCTATACTTGGT +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKGFQPR*KSPILG
Trigger: ACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACC...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGCATATGGACTGCCATaGGTCTCCAGGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPAYGLP*VSRLMF
Trigger: GAACATGAGCCTGGAGACCCATGGCAGTCCATATGC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCATCTTCATGATGAGTaGCATCTACCACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDHLHDE*HLPHEE
Trigger: TTCCTCATGTGGTAGATGTCACTCATCATGAAGATG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCTCCTTAGGTCCTAACTaGAGTGCCCAAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCSLGPN*SAQAET
Trigger: TGTCTCAGCTTGGGCACTTCAGTTAGGACCTAAGGA...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCTCTCCGGGGAGACATaGGGAATTGTTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGLSGET*GIVPPI
Trigger: TATGGGAGGAACAATTCCTCATGTCTCCCCGGAGAG...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGACTCTCCGGGGAGACATaGGGAATTGTTCCTCCCATA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRLSGET*GIVPPI
Trigger: TATGGGAGGAACAATTCCTCATGTCTCCCCGGAGAG...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGTGGCCTCTGGAATATaGCTACCTGGACTTGAATGC +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHVASGI*LPGLEC
Trigger: GCATTCAAGTCCAGGTAGTCATATTCCAGAGGCCAC...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGTGGCCTCTGGAATATaGCTACCTGGACTTGAATGC +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPVASGI*LPGLEC
Trigger: GCATTCAAGTCCAGGTAGTCATATTCCAGAGGCCAC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCATGCTGCCTTCCTTTaGGGAGACTTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKHAAFL*GDFISL
Trigger: CAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACCATGCTGCCTTCCTTTaGGGAGACTTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDHAAFL*GDFISL
Trigger: CAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATG...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDKKDTC*LPLRRL
Trigger: AAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTTCCTCTGGAGACAGCTaGCAGGGCTCCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLSSGDS*QGSCYI
Trigger: GATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTGCATATGGACTGCCATaGGTCTCCAGGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLAYGLP*VSRLMF
Trigger: GAACATGAGCCTGGAGACCCATGGCAGTCCATATGC...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGTGGCTTTGATCCTCTaGAGACAGCTGCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAVALIL*RQLPGL
Trigger: GAGCCCTGGCAGCTGTCTCCAGAGGATCAAAGCCAC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTGATTTCTACTTCCTATaGCCACATGATAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECDFYFL*PHDSRI
Trigger: GATGCGGCTATCATGTGGTCATAGGAAGTAGAAATC...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTCCTTAGGTCCTAACTaGAGTGCCCAAGCTGAGACA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGSLGPN*SAQAET
Trigger: TGTCTCAGCTTGGGCACTTCAGTTAGGACCTAAGGA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTACCATAGCAAGTGGTaGCTGGTTAAGGTGCGACAA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHYHSKW*LVKVRQ
Trigger: TTGTCGCACCTTAACCAGTCACCACTTGCTATGGTA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTACCATAGCAAGTGGTaGCTGGTTAAGGTGCGACAA +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPYHSKW*LVKVRQ
Trigger: TTGTCGCACCTTAACCAGTCACCACTTGCTATGGTA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATACCATAGCAAGTGGTaGCTGGTTAAGGTGCGACAA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPYHSKW*LVKVRQ
Trigger: TTGTCGCACCTTAACCAGTCACCACTTGCTATGGTA...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAAGCAAGATGAAGGGATaGAAAAGGACACATGCTGCC +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPSKMKG*KRTHAA
Trigger: GGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGAGCAAGATGAAGGGATaGAAAAGGACACATGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKSKMKG*KRTHAA
Trigger: GGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGTTGAATATAGGACGCTaGATAATATGCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKLNIGR*IICMQF
Trigger: GAACTGCATGCATATTATTCAGCGTCCTATATTCAA...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394621.7
ENST00000394629.2
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGCGCTTGAATATTGTTaGTGCATATATAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDALEYC*CIYKPA
Trigger: GGCAGGTTTATATATGCAGCAACAATATTCAAGCGC...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAAAGTTGATAAGCAGCTaGCAGAAGACCTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTKLISS*QKTCEV
Trigger: TACCTCGCAGGTCTTCTGGCAGCTGCTTATCAACTT...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAAGTTGATAAGCAGCTaGCAGAAGACCTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDKLISS*QKTCEV
Trigger: TACCTCGCAGGTCTTCTGGCAGCTGCTTATCAACTT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACAAGTTGATAAGCAGCTaGCAGAAGACCTGCGAGGTA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHKLISS*QKTCEV
Trigger: TACCTCGCAGGTCTTCTGGCAGCTGCTTATCAACTT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGCTTGAATGCTCACTCTaGCATTTATTAACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKLECSL*HLLTAR
Trigger: TCTTGCAGTTAATAAATGGCAGAGTGAGCATTCAAG...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCTACCTGGACTTGAATaGTCACTCTGCCATTTATTA +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDLPGLE*SLCHLL
Trigger: TAATAAATGGCAGAGTGAGCATTCAAGTCCAGGTAG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCTCAGTCTGGGTATCTaGAAAGCTGCAAAAGATCTG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLSLGI*KAAKDL
Trigger: CAGATCTTTTGCAGCTTTGCAGATACCCAGACTGAG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394632.5
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCTCAGTCTGGGTATCTaGAAAGCTGCAAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLSLGI*KAAKDP
Trigger: TGGATCTTTTGCAGCTTTGCAGATACCCAGACTGAG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTATAGCTACCACCACTaGCCCTCTCCAGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKYSYHH*PSPESK
Trigger: TTTACTCTCTGGAGAGGGCCAGTGGTGGTAGCTATA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCGCGACAAAGGTCAGCTaGCAGATTACTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCATKVS*QITCVQ
Trigger: TTGCACACAAGTAATCTGCCAGCTGACCTTTGTCGC...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGCGACAAAGGTCAGCTaGCAGATTACTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHATKVS*QITCVQ
Trigger: TTGCACACAAGTAATCTGCCAGCTGACCTTTGTCGC...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGCATATGGACTGCCATaGGTCTCCAGGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGAYGLP*VSRLMF
Trigger: GAACATGAGCCTGGAGACCCATGGCAGTCCATATGC...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTCATCTGGCCACTaGAAGAATCCAAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDSSSGH*KNPNSL
Trigger: CAGACTGTTTGGATTCTTCCAGTGGCCAGATGAGCT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAGTTCCAGCTCAGTCTaGGTATCTGCAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPSSSSV*VSAKLQ
Trigger: TTGCAGCTTTGCAGATACCCAGACTGAGCTGGAACT...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAGTTCCAGCTCAGTCTaGGTATCTGCAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCSSSSV*VSAKLQ
Trigger: TTGCAGCTTTGCAGATACCCAGACTGAGCTGGAACT...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGAGACTTCATCTCACTaGCCAACACTCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPETSSH*PTLSHM
Trigger: CATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGAGACTTCATCTCACTaGCCAACACTCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPETSSH*PTLSHM
Trigger: CATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTCCCATCATAGAGATTaGTTCCATGATACGGACACT +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECSHHRD*FHDTDT
Trigger: AGTGTCCGTATCATGGAATCAATCTCTATGATGGGA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCTCCCATCATAGAGATTaGTTCCATGATACGGACACT +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLSHHRD*FHDTDT
Trigger: AGTGTCCGTATCATGGAATCAATCTCTATGATGGGA...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAGATTTCTACTTCCTATaGCCACATGATAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTDFYFL*PHDSRI
Trigger: GATGCGGCTATCATGTGGTCATAGGAAGTAGAAATC...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGATTTCTACTTCCTATaGCCACATGATAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKDFYFL*PHDSRI
Trigger: GATGCGGCTATCATGTGGTCATAGGAAGTAGAAATC...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCATCTTCATGATGAGTaGCATCTACCACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECHLHDE*HLPHEE
Trigger: TTCCTCATGTGGTAGATGTCACTCATCATGAAGATG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCTGAAGTGCCCAAGCTaGGACAACATTAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLKCPS*DNIKSF
Trigger: AAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCACCTGTTGTCGCGCTTaGATATTGTTGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGTCCRA*ILLLHI
Trigger: TATATGCAGCAACAATATTCAAGCGCGACAACAGGT...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATTTTCTAGCATATGGATaGATCACATCTCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDFLAYG*ITSLTK
Trigger: CTTTGTCAGAGATGTGATTCATCCATATGCTAGAAA...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCATGGAAAGTACTTATaGGCAGAGCGACATATCCAA +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECHGKYL*AERHIQ
Trigger: TTGGATATGTCGCTCTGCTCATAAGTACTTTCCATG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATGGAAAGTACTTATaGGCAGAGCGACATATCCAA +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGHGKYL*AERHIQ
Trigger: TTGGATATGTCGCTCTGCTCATAAGTACTTTCCATG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGTCATCACATTACTGTaGCCCTCTCCGGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAVITLL*PSPGRH
Trigger: ATGTCTCCCCGGAGAGGGTCACAGTAATGTGATGAC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGATGACTACCTGGACTTaGATGCTCACTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKMTTWT*MLTLPF
Trigger: AAATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCAT...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACATGACTACCTGGACTTaGATGCTCACTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNMTTWT*MLTLPF
Trigger: AAATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCAT...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACATGACTACCTGGACTTaGATGCTCACTCTGCCATTT +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHMTTWT*MLTLPF
Trigger: AAATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCAT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTCCTGGCTAACACGGTaGAACTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGSWLTR*NSVSTK
Trigger: TTTAGTAGAGACGGAGTTTCACCGTGTTAGCCAGGA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGATCCTGGCTAACACGGTaGAACTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRSWLTR*NSVSTK
Trigger: TTTAGTAGAGACGGAGTTTCACCGTGTTAGCCAGGA...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTCATGCTGCCTTCCTTTaGGGAGACTTCATCTCACTG +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGHAAFL*GDFISL
Trigger: CAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATG...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAAGCAAGATGAAGGGATaGAAAAGGACACATGCTGCC +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRSKMKG*KRTHAA
Trigger: GGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCT...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTTCCTCTGGAGACAGCTaGCAGGGCTCCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPASSGDS*QGSCYI
Trigger: GATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATTCTGGTCTCTAATCTaGCTTACTCTTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPFWSLI*LTLWVW
Trigger: CCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAA...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTTCTGGTCTCTAATCTaGCTTACTCTTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPFWSLI*LTLWVW
Trigger: CCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTTCTGGTCTCTAATCTaGCTTACTCTTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHFWSLI*LTLWVW
Trigger: CCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTTCTGGTCTCTAATCTaGCTTACTCTTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDFWSLI*LTLWVW
Trigger: CCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCGGAATGAAATTCAACTaGCGGGCAAGTTCAATAACC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGGMKFN*RASSIT
Trigger: GGTTATTGAACTTGCCCGCCAGTTGAATTTCATTCC...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTATAGCTACCACCACTaGCCCTCTCCAGAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGYSYHH*PSPESK
Trigger: TTTACTCTCTGGAGAGGGCCAGTGGTGGTAGCTATA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATTTGGTTTCTAGCATATaGATGAATCACATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDLVSSI*MNHISD
Trigger: GTCAGAGATGTGATTCATCCATATGCTAGAAACCAA...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCGGTTTCCAACCAAGGTaGAAATCTCCTATACTTGGT +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLGFQPR*KSPILG
Trigger: ACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACC...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTGGTTTCCAACCAAGGTaGAAATCTCCTATACTTGGT +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECGFQPR*KSPILG
Trigger: ACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACC...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTGCGACAAAGGTCAGCTaGCAGATTACTTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLATKVS*QITCVQ
Trigger: TTGCACACAAGTAATCTGCCAGCTGACCTTTGTCGC...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCATAGCAAGTGGTGACTaGTTAAGGTGCGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCIASGD*LRCDKG
Trigger: ACCTTTGTCGCACCTTAACCAGTCACCACTTGCTAT...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACATAGCAAGTGGTGACTaGTTAAGGTGCGACAAAGGT +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHIASGD*LRCDKG
Trigger: ACCTTTGTCGCACCTTAACCAGTCACCACTTGCTAT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGGTACTCCCTAATGAATaGTTATGCAGGCAGGAGAAC +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKVLPNE*LCRQEN
Trigger: GTTCTCCTGCCTGCATAACCATTCATTAGGGAGTAC...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAAGTTCCAGCTCAGTCTaGGTATCTGCAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRSSSSV*VSAKLQ
Trigger: TTGCAGCTTTGCAGATACCCAGACTGAGCTGGAACT...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTAGTTCCAGCTCAGTCTaGGTATCTGCAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLSSSSV*VSAKLQ
Trigger: TTGCAGCTTTGCAGATACCCAGACTGAGCTGGAACT...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGAGTTCCAGCTCAGTCTaGGTATCTGCAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGSSSSV*VSAKLQ
Trigger: TTGCAGCTTTGCAGATACCCAGACTGAGCTGGAACT...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAGAGACTTCATCTCACTaGCCAACACTCAGTCACATG +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRETSSH*PTLSHM
Trigger: CATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTC...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCACCAAGAATATCCTaGGACAATGTCTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHSPRIS*DNVSLP
Trigger: AGGCAAGGAGACATTGTCCCAGGATATTCTTGGTGA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCCCATCATAGAGATTaGTTCCATGATACGGACACT +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHSHHRD*FHDTDT
Trigger: AGTGTCCGTATCATGGAATCAATCTCTATGATGGGA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATCCCATCATAGAGATTaGTTCCATGATACGGACACT +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPSHHRD*FHDTDT
Trigger: AGTGTCCGTATCATGGAATCAATCTCTATGATGGGA...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGGATTTCTACTTCCTATaGCCACATGATAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGDFYFL*PHDSRI
Trigger: GATGCGGCTATCATGTGGTCATAGGAAGTAGAAATC...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCATCTTCATGATGAGTaGCATCTACCACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKHLHDE*HLPHEE
Trigger: TTCCTCATGTGGTAGATGTCACTCATCATGAAGATG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACCATCTTCATGATGAGTaGCATCTACCACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHHLHDE*HLPHEE
Trigger: TTCCTCATGTGGTAGATGTCACTCATCATGAAGATG...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACATCTTCATGATGAGTaGCATCTACCACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPHLHDE*HLPHEE
Trigger: TTCCTCATGTGGTAGATGTCACTCATCATGAAGATG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCCATCTTCATGATGAGTaGCATCTACCACATGAGGAA +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCHLHDE*HLPHEE
Trigger: TTCCTCATGTGGTAGATGTCACTCATCATGAAGATG...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTCTGAAGTGCCCAAGCTaGGACAACATTAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPLKCPS*DNIKSF
Trigger: AAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAG...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCCTGAAGTGCCCAAGCTaGGACAACATTAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCLKCPS*DNIKSF
Trigger: AAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAG...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACTGAAGTGCCCAAGCTaGGACAACATTAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPLKCPS*DNIKSF
Trigger: AAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACCTGAAGTGCCCAAGCTaGGACAACATTAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHLKCPS*DNIKSF
Trigger: AAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAG...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACACCTGTTGTCGCGCTTaGATATTGTTGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNTCCRA*ILLLHI
Trigger: TATATGCAGCAACAATATTCAAGCGCGACAACAGGT...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAACCTGTTGTCGCGCTTaGATATTGTTGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTTCCRA*ILLLHI
Trigger: TATATGCAGCAACAATATTCAAGCGCGACAACAGGT...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACACCTGTTGTCGCGCTTaGATATTGTTGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDTCCRA*ILLLHI
Trigger: TATATGCAGCAACAATATTCAAGCGCGACAACAGGT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACCATGGAAAGTACTTATaGGCAGAGCGACATATCCAA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHHGKYL*AERHIQ
Trigger: TTGGATATGTCGCTCTGCTCATAAGTACTTTCCATG...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCACCCAGAATTACAATTaGGGGCAAAACAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCTQNYN*GQNKSK
Trigger: CTTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGGT...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAACCCAGAATTACAATTaGGGGCAAAACAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTTQNYN*GQNKSK
Trigger: CTTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGGT...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACCCAGAATTACAATTaGGGGCAAAACAAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPTQNYN*GQNKSK
Trigger: CTTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGGT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTCCAAGAACTAACAAGTaGTTCTCAAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPPRTNK*FSSGEK
Trigger: TTTCTCCCCACTTGAGAATCACTTGTTAGTTCTTGG...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATTACAGTGACCTTCCTTaGATCTTTGATACCATTTAT +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDYSDLP*IFDTIY
Trigger: ATAAATGGTATCAAAGATGCAAGGAAGGTCACTGTA...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCGCGCTTGAATATTGTTaGTGCATATATAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGALEYC*CIYKPA
Trigger: GGCAGGTTTATATATGCAGCAACAATATTCAAGCGC...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGGCAGATTACTTGTGTaGAAACTTGATACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDGRLLV*KLDTFV
Trigger: AACAAAAGTATCAAGTTTGCACACAAGTAATCTGCC...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCCTACCTGGACTTGAATaGTCACTCTGCCATTTATTA +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLLPGLE*SLCHLL
Trigger: TAATAAATGGCAGAGTGAGCATTCAAGTCCAGGTAG...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCTACCTGGACTTGAATaGTCACTCTGCCATTTATTA +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLPGLE*SLCHLL
Trigger: TAATAAATGGCAGAGTGAGCATTCAAGTCCAGGTAG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCATAAAAGTTATCATTaGCCAACTGAATTCCTACCA +
Preference number: 4 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDHKSYH*PTEFLP
Trigger: TGGTAGGAATTCAGTTGGGCAATGATAACTTTTATG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGCTCAGTCTGGGTATCTaGAAAGCTGCAAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKLSLGI*KAAKDL
Trigger: AAGATCTTTTGCAGCTTTGCAGATACCCAGACTGAG...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTCTCAGTCTGGGTATCTaGAAAGCTGCAAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPLSLGI*KAAKDL
Trigger: AAGATCTTTTGCAGCTTTGCAGATACCCAGACTGAG...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPKKDTC*LPLRRL
Trigger: AAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTGAATGGTCAAGGATTTaGCAAAATCTCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECEWSRI*QNLHFQ
Trigger: TTGGAAGTGGAGATTTTGCCAAATCCTTGACCATTC...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGGGAATGAAATTCAACTaGCGGGCAAGTTCAATAACC +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKGMKFN*RASSIT
Trigger: GGTTATTGAACTTGCCCGCCAGTTGAATTTCATTCC...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGGAATGAAATTCAACTaGCGGGCAAGTTCAATAACC +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPGMKFN*RASSIT
Trigger: GGTTATTGAACTTGCCCGCCAGTTGAATTTCATTCC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCGGTTTCCAACCAAGGTaGAAATCTCCTATACTTGGT +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCGFQPR*KSPILG
Trigger: ACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACC...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGGTTTCCAACCAAGGTaGAAATCTCCTATACTTGGT +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPGFQPR*KSPILG
Trigger: ACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGATCACCAAGAATATCCTaGGACAATGTCTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRSPRIS*DNVSLP
Trigger: AGGCAAGGAGACATTGTCCCAGGATATTCTTGGTGA...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR TCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAACCTGTTGTCGCGCTTaGATATTGTTGCTGCATATA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRTCCRA*ILLLHI
Trigger: TATATGCAGCAACAATATTCAAGCGCGACAACAGGT...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTTTCTAGCATATGGATaGATCACATCTCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECFLAYG*ITSLTK
Trigger: CTTTGTCAGAGATGTGATTCATCCATATGCTAGAAA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACGCTGATAAGCCATGTTaGGAAACAAATATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDADKPC*ETNISL
Trigger: CAGAGAGATATTTGTTTCTCAACATGGCTTATCAGC...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGCTGATAAGCCATGTTaGGAAACAAATATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPADKPC*ETNISL
Trigger: CAGAGAGATATTTGTTTCTCAACATGGCTTATCAGC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCGCTGATAAGCCATGTTaGGAAACAAATATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCADKPC*ETNISL
Trigger: CAGAGAGATATTTGTTTCTCAACATGGCTTATCAGC...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGACATGGAAAGTACTTATaGGCAGAGCGACATATCCAA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRHGKYL*AERHIQ
Trigger: TTGGATATGTCGCTCTGCTCATAAGTACTTTCCATG...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTTTATATGGCAGCTGTaGACACCATTTGTCATCACA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHFIWQL*TPFVIT
Trigger: TGTGATGACAAATGGTGTTCACAGCTGCCATATAAA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTTTATATGGCAGCTGTaGACACCATTTGTCATCACA +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDFIWQL*TPFVIT
Trigger: TGTGATGACAAATGGTGTTCACAGCTGCCATATAAA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGTTTATATGGCAGCTGTaGACACCATTTGTCATCACA +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKFIWQL*TPFVIT
Trigger: TGTGATGACAAATGGTGTTCACAGCTGCCATATAAA...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCCAAGAACTAACAAGTaGTTCTCAAGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGPRTNK*FSSGEK
Trigger: TTTCTCCCCACTTGAGAATCACTTGTTAGTTCTTGG...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGCGCTTGAATATTGTTaGTGCATATATAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHALEYC*CIYKPA
Trigger: GGCAGGTTTATATATGCAGCAACAATATTCAAGCGC...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGTAGCAAATCTCCACTaGTCTAAGGTTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAVANLH*SKVLTT
Trigger: GGTGGTGAGAACCTTAGAGCAGTGGAGATTTGCTAC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCTCAGTCTGGGTATCTaGAAAGCTGCAAAAGATCTT +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLLSLGI*KAAKDL
Trigger: AAGATCTTTTGCAGCTTTGCAGATACCCAGACTGAG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLKKDTC*LPLRRL
Trigger: AAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTTACAATGGCTTAAATaGAGGAAAAAGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLQWLK*RKKQWK
Trigger: CTTCCACTGCTTTTTCCTGCATTTAAGCCATTGTAA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGGGTATCTGCAAAGCTaGAAAAGATCCAGAATTACA +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPGYLQS*KRSRIT
Trigger: TGTAATTCTGGATCTTTTGCAGCTTTGCAGATACCC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394626.5
ENST00000394629.2
CDS-3UTR GCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTCTCAGTCTGGGTATCTaGAAAGCTGCAAAAGATCCA +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGLSLGI*KAAKDP
Trigger: TGGATCTTTTGCAGCTTTGCAGATACCCAGACTGAG...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGAATGGTCAAGGATTTaGCAAAATCTCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPEWSRI*QNLHFQ
Trigger: TTGGAAGTGGAGATTTTGCCAAATCCTTGACCATTC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTTGGATTCTGGGTACTaGTTTATCCTCATGTTATTG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLDSGY*FILMLL
Trigger: CAATAACATGAGGATAAACCAGTACCCAGAATCCAA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCTTGGATTCTGGGTACTaGTTTATCCTCATGTTATTG +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGLDSGY*FILMLL
Trigger: CAATAACATGAGGATAAACCAGTACCCAGAATCCAA...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGGGAATGAAATTCAACTaGCGGGCAAGTTCAATAACC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGGMKFN*RASSIT
Trigger: GGTTATTGAACTTGCCCGCCAGTTGAATTTCATTCC...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTTGGTTTCTAGCATATaGATGAATCACATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECLVSSI*MNHISD
Trigger: GTCAGAGATGTGATTCATCCATATGCTAGAAACCAA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGGGTTTCCAACCAAGGTaGAAATCTCCTATACTTGGT +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGGFQPR*KSPILG
Trigger: ACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACC...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGATTTCTACTTCCTATaGCCACATGATAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPADFYFL*PHDSRI
Trigger: GATGCGGCTATCATGTGGTCATAGGAAGTAGAAATC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATTTCTAGCATATGGATaGATCACATCTCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPFLAYG*ITSLTK
Trigger: CTTTGTCAGAGATGTGATTCATCCATATGCTAGAAA...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGTTTCTAGCATATGGATaGATCACATCTCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKFLAYG*ITSLTK
Trigger: CTTTGTCAGAGATGTGATTCATCCATATGCTAGAAA...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTTTCTAGCATATGGATaGATCACATCTCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDFLAYG*ITSLTK
Trigger: CTTTGTCAGAGATGTGATTCATCCATATGCTAGAAA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTGCTGATAAGCCATGTTaGGAAACAAATATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLADKPC*ETNISL
Trigger: CAGAGAGATATTTGTTTCTCAACATGGCTTATCAGC...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTCATGGAAAGTACTTATaGGCAGAGCGACATATCCAA +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGHGKYL*AERHIQ
Trigger: TTGGATATGTCGCTCTGCTCATAAGTACTTTCCATG...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR TCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAAGTGAATTACCAAACTaGCAAGGCAGTTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTSELPN*QGSCRK
Trigger: TTTTCTACAACTGCCTTGTCAGTTTGGTAATTCACT...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACAGTGAATTACCAAACTaGCAAGGCAGTTGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHSELPN*QGSCRK
Trigger: TTTTCTACAACTGCCTTGTCAGTTTGGTAATTCACT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAGAAGATAGTGCCATTTaGAACAACAGATGCATCTTT +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTEDSAI*NNRCIF
Trigger: AAAGATGCATCTGTTGTTTCAAATGGCACTATCTTC...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCGAAGATAGTGCCATTTaGAACAACAGATGCATCTTT +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCEDSAI*NNRCIF
Trigger: AAAGATGCATCTGTTGTTTCAAATGGCACTATCTTC...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTACAGTGACCTTCCTTaGATCTTTGATACCATTTAT +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECYSDLP*IFDTIY
Trigger: ATAAATGGTATCAAAGATGCAAGGAAGGTCACTGTA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCTACAGTGACCTTCCTTaGATCTTTGATACCATTTAT +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLYSDLP*IFDTIY
Trigger: ATAAATGGTATCAAAGATGCAAGGAAGGTCACTGTA...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGGCGCTTGAATATTGTTaGTGCATATATAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGALEYC*CIYKPA
Trigger: GGCAGGTTTATATATGCAGCAACAATATTCAAGCGC...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECISYTW*RNKVDK
Trigger: CTTATCAACTTTATTACGGCACCAAGTATAGGAGAT...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLISYTW*RNKVDK
Trigger: CTTATCAACTTTATTACGGCACCAAGTATAGGAGAT...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAGCCAAGGCTCATTATaGCAAAGGAGATATACATTT +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPSQGSL*QRRYTF
Trigger: AAATGTATATCTCCTTTGGCATAATGAGCCTTGGCT...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGAGCCAAGGCTCATTATaGCAAAGGAGATATACATTT +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKSQGSL*QRRYTF
Trigger: AAATGTATATCTCCTTTGGCATAATGAGCCTTGGCT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR GCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCCTTGAATGCTCACTCTaGCATTTATTAACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCLECSL*HLLTAR
Trigger: TCTTGCAGTTAATAAATGGCAGAGTGAGCATTCAAG...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACATTATACATTTTTGGATaGACCCAACCCACTCTAAAG +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTLYIFG*TQPTLK
Trigger: CTTTAGAGTGGGTTGGGTGCATCCAAAAATGTATAA...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTTATACATTTTTGGATaGACCCAACCCACTCTAAAG +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKLYIFG*TQPTLK
Trigger: CTTTAGAGTGGGTTGGGTGCATCCAAAAATGTATAA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGKKDTC*LPLRRL
Trigger: AAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCTTACAATGGCTTAAATaGAGGAAAAAGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCLQWLK*RKKQWK
Trigger: CTTCCACTGCTTTTTCCTGCATTTAAGCCATTGTAA...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTTACAATGGCTTAAATaGAGGAAAAAGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPLQWLK*RKKQWK
Trigger: CTTCCACTGCTTTTTCCTGCATTTAAGCCATTGTAA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTTACAATGGCTTAAATaGAGGAAAAAGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNLQWLK*RKKQWK
Trigger: CTTCCACTGCTTTTTCCTGCATTTAAGCCATTGTAA...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAGGGTATCTGCAAAGCTaGAAAAGATCCAGAATTACA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRGYLQS*KRSRIT
Trigger: TGTAATTCTGGATCTTTTGCAGCTTTGCAGATACCC...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGGAATGGTCAAGGATTTaGCAAAATCTCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGEWSRI*QNLHFQ
Trigger: TTGGAAGTGGAGATTTTGCCAAATCCTTGACCATTC...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAGAATGGTCAAGGATTTaGCAAAATCTCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWREWSRI*QNLHFQ
Trigger: TTGGAAGTGGAGATTTTGCCAAATCCTTGACCATTC...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTTGGATTCTGGGTACTaGTTTATCCTCATGTTATTG +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHLDSGY*FILMLL
Trigger: CAATAACATGAGGATAAACCAGTACCCAGAATCCAA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTTGGATTCTGGGTACTaGTTTATCCTCATGTTATTG +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDLDSGY*FILMLL
Trigger: CAATAACATGAGGATAAACCAGTACCCAGAATCCAA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTTGGATTCTGGGTACTaGTTTATCCTCATGTTATTG +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPLDSGY*FILMLL
Trigger: CAATAACATGAGGATAAACCAGTACCCAGAATCCAA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTCCAAATATTCAGCATTaGATTCTGGGTACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPPNIQH*ILGTGL
Trigger: TAAACCAGTACCCAGAATCCAATGCTGAATATTTGG...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACCCAAATATTCAGCATTaGATTCTGGGTACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNPNIQH*ILGTGL
Trigger: TAAACCAGTACCCAGAATCCAATGCTGAATATTTGG...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCCCAAATATTCAGCATTaGATTCTGGGTACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCPNIQH*ILGTGL
Trigger: TAAACCAGTACCCAGAATCCAATGCTGAATATTTGG...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGGAATGAAATTCAACTaGCGGGCAAGTTCAATAACC +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGGMKFN*RASSIT
Trigger: GGTTATTGAACTTGCCCGCCAGTTGAATTTCATTCC...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTTGGTTTCTAGCATATaGATGAATCACATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNLVSSI*MNHISD
Trigger: GTCAGAGATGTGATTCATCCATATGCTAGAAACCAA...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAAGGAAGCATCTAGATTaGCATTGTGAACATAATGCA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPRKHLD*HCEHNA
Trigger: TGCATTATGTTCACAATGCCAATCTAGATGCTTCCT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCTCAGACAGTGTTAAATaGTATCAGGATAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGSDSVK*YQDKEL
Trigger: CAGTTCTTTATCCTGATACCATTTAACACTGTCTGA...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTCAGACAGTGTTAAATaGTATCAGGATAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: LANTQSHVHLTARTAEECSDSVK*YQDKEL
Trigger: CAGTTCTTTATCCTGATACCATTTAACACTGTCTGA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCTCAGACAGTGTTAAATaGTATCAGGATAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLSDSVK*YQDKEL
Trigger: CAGTTCTTTATCCTGATACCATTTAACACTGTCTGA...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTTTCTAGCATATGGATaGATCACATCTCTGACAAAG +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGFLAYG*ITSLTK
Trigger: CTTTGTCAGAGATGTGATTCATCCATATGCTAGAAA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGCTGATAAGCCATGTTaGGAAACAAATATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGADKPC*ETNISL
Trigger: CAGAGAGATATTTGTTTCTCAACATGGCTTATCAGC...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGTCATCACATTACTGTaGCCCTCTCCGGGGAGACAT +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLVITLL*PSPGRH
Trigger: ATGTCTCCCCGGAGAGGGTCACAGTAATGTGATGAC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTTTGAATATAGGACGCTaGATAATATGCATGCAGTTC +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLLNIGR*IICMQF
Trigger: GAACTGCATGCATATTATTCAGCGTCCTATATTCAA...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394621.7
ENST00000394629.2
CDS-3UTR GCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGTACAGTGACCTTCCTTaGATCTTTGATACCATTTAT +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKYSDLP*IFDTIY
Trigger: ATAAATGGTATCAAAGATGCAAGGAAGGTCACTGTA...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTACAGTGACCTTCCTTaGATCTTTGATACCATTTAT +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDYSDLP*IFDTIY
Trigger: ATAAATGGTATCAAAGATGCAAGGAAGGTCACTGTA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKISYTW*RNKVDK
Trigger: CTTATCAACTTTATTACGGCACCAAGTATAGGAGAT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR GCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNISYTW*RNKVDK
Trigger: CTTATCAACTTTATTACGGCACCAAGTATAGGAGAT...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKISYTW*RNKVDK
Trigger: CTTATCAACTTTATTACGGCACCAAGTATAGGAGAT...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTRVFNI*MNLLIS
Trigger: GCTTATCAGCAGGTTCATGCAAATATTGAAAACTCT...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: HLTARTAEECNGQPLLKKRVFNI*MNLLIS
Trigger: GCTTATCAGCAGGTTCATGCAAATATTGAAAACTCT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR GCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPRVFNI*MNLLIS
Trigger: GCTTATCAGCAGGTTCATGCAAATATTGAAAACTCT...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDRVFNI*MNLLIS
Trigger: GCTTATCAGCAGGTTCATGCAAATATTGAAAACTCT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGAGCCAAGGCTCATTATaGCAAAGGAGATATACATTT +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGSQGSL*QRRYTF
Trigger: AAATGTATATCTCCTTTGGCATAATGAGCCTTGGCT...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTAGCCAAGGCTCATTATaGCAAAGGAGATATACATTT +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLSQGSL*QRRYTF
Trigger: AAATGTATATCTCCTTTGGCATAATGAGCCTTGGCT...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGGTGACTGGTTAAGGTaGGACAAAGGTCAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLGDWLR*DKGQLA
Trigger: TGCCAGCTGACCTTTGTCGCACCTTAACCAGTCACC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGATTATACATTTTTGGATaGACCCAACCCACTCTAAAG +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRLYIFG*TQPTLK
Trigger: CTTTAGAGTGGGTTGGGTGCATCCAAAAATGTATAA...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACCATAAAAGTTATCATTaGCCAACTGAATTCCTACCA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHHKSYH*PTEFLP
Trigger: TGGTAGGAATTCAGTTGGGCAATGATAACTTTTATG...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACATAAAAGTTATCATTaGCCAACTGAATTCCTACCA +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPHKSYH*PTEFLP
Trigger: TGGTAGGAATTCAGTTGGGCAATGATAACTTTTATG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAKKDTC*LPLRRL
Trigger: AAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACATCCTCTGGAGACAGCTaGCAGGGCTCCTGTTATATC +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTSSGDS*QGSCYI
Trigger: GATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGACCAAATATTCAGCATTaGATTCTGGGTACTGGTTTA +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRPNIQH*ILGTGL
Trigger: TAAACCAGTACCCAGAATCCAATGCTGAATATTTGG...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTTTGGTTTCTAGCATATaGATGAATCACATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLLVSSI*MNHISD
Trigger: GTCAGAGATGTGATTCATCCATATGCTAGAAACCAA...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTTGGTTTCTAGCATATaGATGAATCACATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: NTQSHVHLTARTAEECNGLVSSI*MNHISD
Trigger: GTCAGAGATGTGATTCATCCATATGCTAGAAACCAA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGATTGGTTTCTAGCATATaGATGAATCACATCTCTGAC +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRLVSSI*MNHISD
Trigger: GTCAGAGATGTGATTCATCCATATGCTAGAAACCAA...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAATTTTTATACATTTTTaGATGCACCCAACCCACTCT +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPIFIHF*MHPTHS
Trigger: AGAGTGGGTTGGGTGCATCCAAAAATGTATAAAAAT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTATTTTTATACATTTTTaGATGCACCCAACCCACTCT +
Preference number: 4 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPIFIHF*MHPTHS
Trigger: AGAGTGGGTTGGGTGCATCCAAAAATGTATAAAAAT...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTAGTACCTACGTaGGTAAGTTTAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHSVVPT*VSLEML
Trigger: TAACATTTCTAAACTTACCCACGTAGGTACTACTGA...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTCAGTAGTACCTACGTaGGTAAGTTTAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKSVVPT*VSLEML
Trigger: TAACATTTCTAAACTTACCCACGTAGGTACTACTGA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACTGAGGCCAGAAGAATaGTTCAGAAAAATAATGATT +
Preference number: 4 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPLRPEE*FRKIMI
Trigger: AATCATTATTTTTCTGAACCATTCTTCTGGCCTCAG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTCAGACAGTGTTAAATaGTATCAGGATAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNSDSVK*YQDKEL
Trigger: CAGTTCTTTATCCTGATACCATTTAACACTGTCTGA...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTCAGACAGTGTTAAATaGTATCAGGATAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKSDSVK*YQDKEL
Trigger: CAGTTCTTTATCCTGATACCATTTAACACTGTCTGA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGCTGATAAGCCATGTTaGGAAACAAATATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAADKPC*ETNISL
Trigger: CAGAGAGATATTTGTTTCTCAACATGGCTTATCAGC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTTACAGTGACCTTCCTTaGATCTTTGATACCATTTAT +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLYSDLP*IFDTIY
Trigger: ATAAATGGTATCAAAGATGCAAGGAAGGTCACTGTA...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAG +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRISYTW*RNKVDK
Trigger: CTTATCAACTTTATTACGGCACCAAGTATAGGAGAT...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTTTGGATTCTGGGTACTaGTTTATCCTCATGTTATTG +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGLDSGY*FILMLL
Trigger: CAATAACATGAGGATAAACCAGTACCCAGAATCCAA...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTATTTTTATACATTTTTaGATGCACCCAACCCACTCT +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLIFIHF*MHPTHS
Trigger: AGAGTGGGTTGGGTGCATCCAAAAATGTATAAAAAT...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCTGAGGCCAGAAGAATaGTTCAGAAAAATAATGATT +
Preference number: 4 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLLRPEE*FRKIMI
Trigger: AATCATTATTTTTCTGAACCATTCTTCTGGCCTCAG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGATCAGACAGTGTTAAATaGTATCAGGATAAAGAACTG +
Preference number: 4 (lower is better)
Translates to: FLVSNLPYSLGVALILWRSDSVK*YQDKEL
Trigger: CAGTTCTTTATCCTGATACCATTTAACACTGTCTGA...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCTCCTGGCTAACACGGTaGAACTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLSWLTR*NSVSTK
Trigger: TTTAGTAGAGACGGAGTTTCACCGTGTTAGCCAGGA...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAAGCAAGATGAAGGGATaGAAAAGGACACATGCTGCC +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTSKMKG*KRTHAA
Trigger: GGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCT...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCAGCAAGATGAAGGGATaGAAAAGGACACATGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLSKMKG*KRTHAA
Trigger: GGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCT...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGRVFNI*MNLLIS
Trigger: GCTTATCAGCAGGTTCATGCAAATATTGAAAACTCT...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGTAGCAAATCTCCACTaGTCTAAGGTTCTCACCACC +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLVANLH*SKVLTT
Trigger: GGTGGTGAGAACCTTAGAGCAGTGGAGATTTGCTAC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCAGCTCATCTGGCCACTaGAAGAATCCAAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLSSSGH*KNPNSL
Trigger: CAGACTGTTTGGATTCTTCCAGTGGCCAGATGAGCT...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAAGCTCATCTGGCCACTaGAAGAATCCAAACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTSSSGH*KNPNSL
Trigger: CAGACTGTTTGGATTCTTCCAGTGGCCAGATGAGCT...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGATTTCTACTTCCTATaGCCACATGATAGCCGCATC +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLDFYFL*PHDSRI
Trigger: GATGCGGCTATCATGTGGTCATAGGAAGTAGAAATC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACATTCTGGTCTCTAATCTaGCTTACTCTTTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTFWSLI*LTLWVW
Trigger: CCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAA...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTTCAGTAGTACCTACGTaGGTAAGTTTAGAAATGTTA +
Preference number: 4 (lower is better)
Translates to: AAAFKEVESIGRQIPVPASVVPT*VSLEML
Trigger: TAACATTTCTAAACTTACCCACGTAGGTACTACTGA...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR TCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACACTGAAGTGCCCAAGCTaGGACAACATTAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTLKCPS*DNIKSF
Trigger: AAAGGATTTAATGTTGTCTCAGCTTGGGCACTTCAG...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAAAAAAGGACACATGCTaGCTTCCTTTGAGGAGACTT +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTKKDTC*LPLRRL
Trigger: AAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAGCGCTTGAATATTGTTaGTGCATATATAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTALEYC*CIYKPA
Trigger: GGCAGGTTTATATATGCAGCAACAATATTCAAGCGC...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGAATGGTCAAGGATTTaGCAAAATCTCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLEWSRI*QNLHFQ
Trigger: TTGGAAGTGGAGATTTTGCCAAATCCTTGACCATTC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAGAATGGTCAAGGATTTaGCAAAATCTCCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTEWSRI*QNLHFQ
Trigger: TTGGAAGTGGAGATTTTGCCAAATCCTTGACCATTC...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR TCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGAAGATAGTGCCATTTaGAACAACAGATGCATCTTT +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLEDSAI*NNRCIF
Trigger: AAAGATGCATCTGTTGTTTCAAATGGCACTATCTTC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACACTTGAATGCTCACTCTaGCATTTATTAACTGCAAGA +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTLECSL*HLLTAR
Trigger: TCTTGCAGTTAATAAATGGCAGAGTGAGCATTCAAG...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACATTACAATGGCTTAAATaGAGGAAAAAGCAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTLQWLK*RKKQWK
Trigger: CTTCCACTGCTTTTTCCTGCATTTAAGCCATTGTAA...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCAGGAAGCATCTAGATTaGCATTGTGAACATAATGCA +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLRKHLD*HCEHNA
Trigger: TGCATTATGTTCACAATGCCAATCTAGATGCTTCCT...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTRVFNI*MNLLIS
Trigger: GCTTATCAGCAGGTTCATGCAAATATTGAAAACTCT...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR GCA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCGGCAGATTACTTGTGTaGAAACTTGATACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HLLTARPLKNNFSILRSLGRLLV*KLDTFV
Trigger: AACAAAAGTATCAAGTTTGCACACAAGTAATCTGCC...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR GCA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAGGCAGATTACTTGTGTaGAAACTTGATACTTTTGTT +
Preference number: 4 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTGRLLV*KLDTFV
Trigger: AACAAAAGTATCAAGTTTGCACACAAGTAATCTGCC...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS GCA 90 bp GGAGGCGCGCGGAGGCCGGCTTGGCAGCGACGCGCCGCTAGGGGCTaGGTGCCCGGACAGCTCGTGGCGCCGAGGGCCCGAGGAACGCTG +
Preference number: 5 (lower is better)
Translates to: GGARRPAWQRRAARG*VPGQLVAPRARGTL
Trigger: CAGCGTTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGGGCACGCAGCCCCTAGCGGCGCGTCGCTGCCAAGCCGGCCTCCGCGCGCCTCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287908.7
ENST00000394621.7
CDS GCA 90 bp CCACCCGGGGGCCAGGGCCTACGGACTGCACCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTGCTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: PPGGQGLRTAPPTGG*RVAAAAVALQLLPR
Trigger: GCGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCCCCGGGTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS TCA 90 bp GCTGCGTGCCCGGACAGCTCGTGGCGCCGAGGGCCCGAGGAACGCTaGCTGGAGTCGGGAAGAGCCGTGGAGCGCGGGGAGGAGTCGGGG +
Preference number: 5 (lower is better)
Translates to: AACPDSSWRRGPEER*LESGRAVERGEESG
Trigger: CCCCGACTCCTCCCCGCGCTCCACGGCTCTTCCCGACTCCAGTCAGCGTTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGGGCACGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287908.7
CDS CCA 90 bp CAAGGGCCCACCCGGGGGCCAGGGCCTACGGACTGCACCTCCGACTaGCGGTTGCAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: QGPTRGPGPTDCTSD*RLQGGCRGGRTPAA
Trigger: AGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCCCCGGGTGGGCCCTTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS CCA 90 bp GGGGCCAGGGCCTACGGACTGCACCTCCGACTGGCGGTTGCAGGGTaGCTGCCGCGGCGGTCGCACTCCAGCTGCTTCCCCGCCTACCCA +
Preference number: 5 (lower is better)
Translates to: GARAYGLHLRLAVAG*LPRRSHSSCFPAYP
Trigger: TGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS GCA 90 bp CCAGGGCCTACGGACTGCACCTCCGACTGGCGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCAGCTGCTTCCCCGCCTACCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PGPTDCTSDWRLQGG*RGGRTPAASPPTQA
Trigger: AGCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS GCA 90 bp CGACTGGCGGTTGCAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGCTGGATCGCGAACAGCCAGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RLAVAGWLPRRSHSS*FPAYPSWIANSQGR
Trigger: TCTCCCCTGGCTGTTCGCGATCCAGCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CAA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACACCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHTSDWR*QGGCRG
Trigger: GCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTCTCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPLSDWR*QGGCRG
Trigger: GCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGAG...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACCTCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHLSDWR*QGGCRG
Trigger: GCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGAG...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CAA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGAACCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: FLVSNLPYSLGVALILWRTSDWR*QGGCRG
Trigger: GCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGT...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CAA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTACCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGC +
Preference number: 5 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGTSDWR*QGGCRG
Trigger: GCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGT...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS-3UTR CAA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGCCCAACCTCAGGACTaGCCCTTAGCTCTCCGACTG +
Preference number: 5 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDAQPQD*PLALRL
Trigger: CAGTCGGAGAGCTAAGGGCAAGTCCTGAGGTTGGGC...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS CCA 90 bp TCACCAAGAATATCCTGGGACAATGTCTCCTTGCCTTCTTTCTCCTaGGCCCAACCTCAGGACTTGCCCTTAGCTCTCCGACTGGCGGTT +
Preference number: 5 (lower is better)
Translates to: SPRISWDNVSLPSFS*AQPQDLPLALRLAV
Trigger: AACCGCCAGTCGGAGAGCTAAGGGCAAGTCCTGAGGTTGGGCCCAGGAGAAAGAAGGCAAGGAGACATTGTCCCAGGATATTCTTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CAA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTGCCCAACCTCAGGACTaGCCCTTAGCTCTCCGACTG +
Preference number: 5 (lower is better)
Translates to: LANTQSHVHLTARTAEECAQPQD*PLALRL
Trigger: CAGTCGGAGAGCTAAGGGCAAGTCCTGAGGTTGGGC...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS-3UTR CAA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATTCTTTGGGTGTGGCTTaGATCCTCTGGAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDSLGVA*ILWRQL
Trigger: CAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGA...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS GCA 90 bp GATTCCATGATACGGACACTTCCAAGATCACCAAGAATATCCTCCTaGGTGGATCTTGCTGGGAGCTGTGCACCAGAGCTGTTCCTAGTC +
Preference number: 5 (lower is better)
Translates to: DSMIRTLPRSPRISS*VDLAGSCAPELFLV
Trigger: GACTAGGAACAGCTCTGGTGCACAGCTCCCAGCAAGATCCACGCAGGAGGATATTCTTGGTGATCTTGGAAGTGTCCGTATCATGGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428074.5
CDS-3UTR CAA 90 bp CTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATCCCACTGATGAACAATaGAAGGTAGGGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: LWRQLPGLLLYPQSQQQDPTDEQ*KVGCLI
Trigger: AATGAGACACCCTACCTTCAATTGTTCATCAGTGGG...ATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTCTTTGGGTGTGGCTTaGATCCTCTGGAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDSLGVA*ILWRQL
Trigger: CAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGTCTTTGGGTGTGGCTTaGATCCTCTGGAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: HLTARTAEECNGQPLLKKSLGVA*ILWRQL
Trigger: CAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGA...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTCTTTGGGTGTGGCTTaGATCCTCTGGAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPSLGVA*ILWRQL
Trigger: CAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTCTTTGGGTGTGGCTTaGATCCTCTGGAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKSLGVA*ILWRQL
Trigger: CAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACATCTTTGGGTGTGGCTTaGATCCTCTGGAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTSLGVA*ILWRQL
Trigger: CAGCTGTCTCCAGAGGATCAAAGCCACACCCAAAGA...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTGGTGCCGTAATAAAGTaGATAAGCAGCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: LANTQSHVHLTARTAEECGAVIK*ISSCQK
Trigger: CTTCTGGCAGCTGCTTATCAACTTTATTACGGCACC...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGTGGGATCTCAGCAATTaGTTAACACTGCTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: HLTARTAEECNGQPLLKKWDLSN*LTLLGP
Trigger: GGGCCCTAGCAGTGTTAACAAATTGCTGAGATCCCA...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCATGGGATCTCAGCAATTaGTTAACACTGCTAGGGCCC +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPWDLSN*LTLLGP
Trigger: GGGCCCTAGCAGTGTTAACAAATTGCTGAGATCCCA...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCACATGCTGCCTTCCTTaGAGGAGACTTCATCTCACT +
Preference number: 5 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGTCCLP*RRLHLT
Trigger: AGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGT...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAATCTGCCTTACTCTTaGGGTGTGGCTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLNLPYS*GVALIL
Trigger: GAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp TCCTCTGGAGACAGCTGCCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGGATCCAGAATTACAATaGAGGGCAAAACAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: SSGDSCQGSCYIHNPSSKDPELQ*RAKQEQ
Trigger: TTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGATC...CTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGGCAGCTGTCTCCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCCGAATGGTCAAGGATTaGGCAAAATCTCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLRMVKD*AKSPLP
Trigger: TGGAAGTGGAGATTTTGCCAAATCCTTGACCATTCG...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGGTGCCGTAATAAAGTaGATAAGCAGCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHGAVIK*ISSCQK
Trigger: CTTCTGGCAGCTGCTTATCAACTTTATTACGGCACC...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGGTGCCGTAATAAAGTaGATAAGCAGCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPGAVIK*ISSCQK
Trigger: CTTCTGGCAGCTGCTTATCAACTTTATTACGGCACC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACAGGGAGACATGAGGAATaGTTCCTCCCATACCTTCTT +
Preference number: 5 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTGRHEE*FLPYLL
Trigger: AAGAAGGTATGGGAGGAACAATTCCTCATGTCTCCC...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCTATGACTACCTGGACTaGAATGCTCACTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLYDYLD*NAHSAI
Trigger: AATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCATA...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACACATGCTGCCTTCCTTaGAGGAGACTTCATCTCACT +
Preference number: 5 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHTCCLP*RRLHLT
Trigger: AGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACACATGCTGCCTTCCTTaGAGGAGACTTCATCTCACT +
Preference number: 5 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNTCCLP*RRLHLT
Trigger: AGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGT...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACACATGCTGCCTTCCTTaGAGGAGACTTCATCTCACT +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDTCCLP*RRLHLT
Trigger: AGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACATGCTGCCTTCCTTaGAGGAGACTTCATCTCACT +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPTCCLP*RRLHLT
Trigger: AGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGAATCTGCCTTACTCTTaGGGTGTGGCTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: HLTARTAEECNGQPLLKKNLPYS*GVALIL
Trigger: GAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAATCTGCCTTACTCTTaGGGTGTGGCTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDNLPYS*GVALIL
Trigger: GAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAAATCTGCCTTACTCTTaGGGTGTGGCTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPNLPYS*GVALIL
Trigger: GAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAATCTGCCTTACTCTTaGGGTGTGGCTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCNLPYS*GVALIL
Trigger: GAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCCTCTCTTCACTTTCTaGGGAGCTTTCCATATACTG +
Preference number: 5 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGPLFTF*GAFHIL
Trigger: CAGTATATGGAAAGCTCCCAAGAAAGTGAAGAGAGG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394629.2
CDS GCA 90 bp ACTGTAACCAGGTTTCCAACCAAGGTGGAAATCTCCTATACTTGGTaGCGTAATAAAGTTGATAAGCAGCTGCCAGAAGACCTGCGAGGT +
Preference number: 5 (lower is better)
Translates to: TVTRFPTKVEISYTW*RNKVDKQLPEDLRG
Trigger: ACCTCGCAGGTCTTCTGGCAGCTGCTTATCAACTTTATTACGGCACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACCTGGTTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACGAATGGTCAAGGATTaGGCAAAATCTCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPRMVKD*AKSPLP
Trigger: TGGAAGTGGAGATTTTGCCAAATCCTTGACCATTCG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACCGAATGGTCAAGGATTaGGCAAAATCTCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNRMVKD*AKSPLP
Trigger: TGGAAGTGGAGATTTTGCCAAATCCTTGACCATTCG...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGAATGGTCAAGGATTaGGCAAAATCTCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTRMVKD*AKSPLP
Trigger: TGGAAGTGGAGATTTTGCCAAATCCTTGACCATTCG...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCGCCAAATATTCAGCATaGGATTCTGGGTACTGGTTT +
Preference number: 5 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGAKYSA*DSGYWF
Trigger: AAACCAGTACCCAGAATCCAATGCTGAATATTTGGC...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCGCCAAATATTCAGCATaGGATTCTGGGTACTGGTTT +
Preference number: 5 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLAKYSA*DSGYWF
Trigger: AAACCAGTACCCAGAATCCAATGCTGAATATTTGGC...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: LANTQSHVHLTARTAEECNLLSR*NIVAAY
Trigger: ATATGCAGCAACAATATTCAAGCGCGACAACAGGTT...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTCTCCAGTTTAAAGCATaGCTCACTGAAGGGATAGAA +
Preference number: 5 (lower is better)
Translates to: LANTQSHVHLTARTAEECLQFKA*LTEGIE
Trigger: TTCTATCCCTTCAGTGAGCAATGCTTTAAACTGGAG...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTTATGACTACCTGGACTaGAATGCTCACTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPYDYLD*NAHSAI
Trigger: AATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCATA...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS TCA 90 bp AACACCATTTGTCATCACATTACTGTGACCCTCTCCGGGGAGACATaGGGAATTGTTCCTCCCATACCTTCTTCCAGAAATTGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: NTICHHITVTLSGET*GIVPPIPSSRNWLF
Trigger: AAAGAGCCAATTTCTGGAAGAAGGTATGGGAGGAACAATTCCTCATGTCTCCCCGGAGAGGGTCACAGTAATGTGATGACAAATGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS CCA 90 bp TACACTGTAACCAGGTTTCCAACCAAGGTGGAAATCTCCTATACTTaGTGCCGTAATAAAGTTGATAAGCAGCTGCCAGAAGACCTGCGA +
Preference number: 5 (lower is better)
Translates to: YTVTRFPTKVEISYT*CRNKVDKQLPEDLR
Trigger: TCGCAGGTCTTCTGGCAGCTGCTTATCAACTTTATTACGGCACCAAGTATAGGAGATTTCCACCTTGGTTGGAAACCTGGTTACAGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
CDS-3UTR CAA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCGAATGGTCAAGGATTaGGCAAAATCTCCACTTCCA +
Preference number: 5 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLRMVKD*AKSPLP
Trigger: TGGAAGTGGAGATTTTGCCAAATCCTTGACCATTCG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACGCCAAATATTCAGCATaGGATTCTGGGTACTGGTTT +
Preference number: 5 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNAKYSA*DSGYWF
Trigger: AAACCAGTACCCAGAATCCAATGCTGAATATTTGGC...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGGCCAAATATTCAGCATaGGATTCTGGGTACTGGTTT +
Preference number: 5 (lower is better)
Translates to: HLTARTAEECNGQPLLKKAKYSA*DSGYWF
Trigger: AAACCAGTACCCAGAATCCAATGCTGAATATTTGGC...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGCCAAATATTCAGCATaGGATTCTGGGTACTGGTTT +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPAKYSA*DSGYWF
Trigger: AAACCAGTACCCAGAATCCAATGCTGAATATTTGGC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNNLLSR*NIVAAY
Trigger: ATATGCAGCAACAATATTCAAGCGCGACAACAGGTT...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPNLLSR*NIVAAY
Trigger: ATATGCAGCAACAATATTCAAGCGCGACAACAGGTT...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDNLLSR*NIVAAY
Trigger: ATATGCAGCAACAATATTCAAGCGCGACAACAGGTT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCGTAAAAGTCACTCTGTaGGTTTCTAGCATATGGATG +
Preference number: 5 (lower is better)
Translates to: KGHMLPSFEETSSHWPTLVKVTL*VSSIWM
Trigger: CATCCATATGCTAGAAACCAACAGAGTGACTTTTAC...GAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCCAGTTTAAAGCATaGCTCACTGAAGGGATAGAA +
Preference number: 5 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTLQFKA*LTEGIE
Trigger: TTCTATCCCTTCAGTGAGCAATGCTTTAAACTGGAG...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACTCCAGTTTAAAGCATaGCTCACTGAAGGGATAGAA +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPLQFKA*LTEGIE
Trigger: TTCTATCCCTTCAGTGAGCAATGCTTTAAACTGGAG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTTACCCAGAATTACAATaGAGGGCAAAACAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: LANTQSHVHLTARTAEECYPELQ*RAKQEQ
Trigger: TTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGGTA...ACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGGGAGACATGAGGAATaGTTCCTCCCATACCTTCTT +
Preference number: 5 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGGRHEE*FLPYLL
Trigger: AAGAAGGTATGGGAGGAACAATTCCTCATGTCTCCC...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGAGCTGTGAACACCATTaGTCATCACATTACTGTGAC +
Preference number: 5 (lower is better)
Translates to: HLTARTAEECNGQPLLKKSCEHH*SSHYCD
Trigger: GTCACAGTAATGTGATGACAAATGGTGTTCACAGCT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCACAGCTGGCAGATTACTaGTGTGCAAACTTGATACTT +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPQLADY*CANLIL
Trigger: AAGTATCAAGTTTGCACACAAGTAATCTGCCAGCTG...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp TTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTGTGGCTTTGATCCTCTGGAGATATGACTACCTGGACTaGAATGCTCACTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: FLVSNLPYSLGVALILWRYDYLD*NAHSAI
Trigger: AATGGCAGAGTGAGCATTCAAGTCCAGGTAGTCATA...TCTCCAGAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATTAGAGACCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACACTCTACAGAGATTTTaGAAAGACTCCGTGGGATCT +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDTLQRF*KDSVGS
Trigger: AGATCCCACGGAGTCTTTCAAAAATCTCTGTAGAGT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCACTCTACAGAGATTTTaGAAAGACTCCGTGGGATCT +
Preference number: 5 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCTLQRF*KDSVGS
Trigger: AGATCCCACGGAGTCTTTCAAAAATCTCTGTAGAGT...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp CACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCAGCCGCTTTTAAAGAAGACTCTACAGAGATTTTaGAAAGACTCCGTGGGATCT +
Preference number: 5 (lower is better)
Translates to: HLTARTAEECNGQPLLKKTLQRF*KDSVGS
Trigger: AGATCCCACGGAGTCTTTCAAAAATCTCTGTAGAGT...CTTCTTTAAAAGCGGCTGCCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GGGATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGTCTGCCTTAATTTaGGATGAATGCATGATGGAA +
Preference number: 5 (lower is better)
Translates to: GMKKDTCCLPLRRLHLTGQSALI*DECMME
Trigger: TTCCATCATGCATTCATCCAAAATTAAGGCAGACTG...GCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: NTQSHVHLTARTAEECNGNLLSR*NIVAAY
Trigger: ATATGCAGCAACAATATTCAAGCGCGACAACAGGTT...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACGTAAAAGTCACTCTGTaGGTTTCTAGCATATGGATG +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDVKVTL*VSSIWM
Trigger: CATCCATATGCTAGAAACCAACAGAGTGACTTTTAC...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACGTAAAAGTCACTCTGTaGGTTTCTAGCATATGGATG +
Preference number: 5 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNVKVTL*VSSIWM
Trigger: CATCCATATGCTAGAAACCAACAGAGTGACTTTTAC...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACGTAAAAGTCACTCTGTaGGTTTCTAGCATATGGATG +
Preference number: 5 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHVKVTL*VSSIWM
Trigger: CATCCATATGCTAGAAACCAACAGAGTGACTTTTAC...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGTAAAAGTCACTCTGTaGGTTTCTAGCATATGGATG +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPVKVTL*VSSIWM
Trigger: CATCCATATGCTAGAAACCAACAGAGTGACTTTTAC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTGGTGCCGTAATAAAGTaGATAAGCAGCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAGAVIK*ISSCQK
Trigger: CTTCTGGCAGCTGCTTATCAACTTTATTACGGCACC...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGCTCCAGTTTAAAGCATaGCTCACTGAAGGGATAGAA +
Preference number: 5 (lower is better)
Translates to: NTQSHVHLTARTAEECNGLQFKA*LTEGIE
Trigger: TTCTATCCCTTCAGTGAGCAATGCTTTAAACTGGAG...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTCTCCAGTTTAAAGCATaGCTCACTGAAGGGATAGAA +
Preference number: 5 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLLQFKA*LTEGIE
Trigger: TTCTATCCCTTCAGTGAGCAATGCTTTAAACTGGAG...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGAGCTGTGAACACCATTaGTCATCACATTACTGTGAC +
Preference number: 5 (lower is better)
Translates to: NTQSHVHLTARTAEECNGSCEHH*SSHYCD
Trigger: GTCACAGTAATGTGATGACAAATGGTGTTCACAGCT...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTAGCTGTGAACACCATTaGTCATCACATTACTGTGAC +
Preference number: 5 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLSCEHH*SSHYCD
Trigger: GTCACAGTAATGTGATGACAAATGGTGTTCACAGCT...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACTTTTATTGTTGGCAGTaGGATTCAGTAGTACCTACG +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDFYCWQ*DSVVPT
Trigger: CGTAGGTACTACTGAATCCAACTGCCAACAATAAAA...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACATTTTATTGTTGGCAGTaGGATTCAGTAGTACCTACG +
Preference number: 5 (lower is better)
Translates to: EKGHMLPSFEETSSHWPTFYCWQ*DSVVPT
Trigger: CGTAGGTACTACTGAATCCAACTGCCAACAATAAAA...TGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACCAGTCTGCCTTAATTTaGGATGAATGCATGATGGAA +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDQSALI*DECMME
Trigger: TTCCATCATGCATTCATCCAAAATTAAGGCAGACTG...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGATCCAGAATTACAATaGAGGGCAAAACAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKDPELQ*RAKQEQ
Trigger: TTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGATC...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394626.5
ENST00000394629.2
CDS CCA 90 bp TCAGAAGGTCCACTCACAATTTTCCAATTTCCTCTCTTCACTTTCTaGGAAAGGCAATGCCATTCCTTAAAATGCGTCACTCCTTGCACA +
Preference number: 5 (lower is better)
Translates to: SEGPLTIFQFPLFTF*ERQCHSLKCVTPCT
Trigger: TGTGCAAGGAGTGACGCATTTTAAGGAATGGCATTGCCTTTCCCAGAAAGTGAAGAGAGGAAATTGGAAAATTGTGAGTGGACCTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACACCTTCCTTGCATCTTaGATACCATTTATGCCATTA +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDTFLAS*IPFMPL
Trigger: TAATGGCATAAATGGTATCAAAGATGCAAGGAAGGT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCAAGGACAAGTTCAATAACCTGTaGTCGCGCTTGAATATTGTT +
Preference number: 5 (lower is better)
Translates to: RLHLTGQHSVTCTPNCKDKFNNL*SRLNIV
Trigger: AACAATATTCAAGCGCGACAACAGGTTATTGAACTT...GTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp AAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACAAGTTCAATAACCTGTaGTCGCGCTTGAATATTGTT +
Preference number: 5 (lower is better)
Translates to: KKDTCCLPLRRLHLTGQHKFNNL*SRLNIV
Trigger: AACAATATTCAAGCGCGACAACAGGTTATTGAACTT...GTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAAGTTCAATAACCTGTaGTCGCGCTTGAATATTGTT +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPKFNNL*SRLNIV
Trigger: AACAATATTCAAGCGCGACAACAGGTTATTGAACTT...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp GATGAAAAAGGACACATGCTGCCTTCCTTTGAGGAGACTTCATCTCACTGGCCAGAGCAAGAACAAAGTTaGGTGGTGTATAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: DEKGHMLPSFEETSSHWPEQEQS*VVYKIC
Trigger: ACAGATTTTATACACCACCAAACTTTGTTCTTGCTC...TGGCCAGTGAGATGAAGTCTCCTCAAAGGAAGGCAGCATGTGTCCTTTTTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCGAGCAAGAACAAAGTTaGGTGGTGTATAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCEQEQS*VVYKIC
Trigger: ACAGATTTTATACACCACCAAACTTTGTTCTTGCTC...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp CCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACGAGCAAGAACAAAGTTaGGTGGTGTATAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: PLRRLHLTGQHSVTCTPNEQEQS*VVYKIC
Trigger: ACAGATTTTATACACCACCAAACTTTGTTCTTGCTC...GTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp CTTCCTTTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTGAGCAAGAACAAAGTTaGGTGGTGTATAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: LPLRRLHLTGQHSVTCTPEQEQS*VVYKIC
Trigger: ACAGATTTTATACACCACCAAACTTTGTTCTTGCTC...AGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAAAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTACCCAGAATTACAATaGAGGGCAAAACAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: NTQSHVHLTARTAEECNGYPELQ*RAKQEQ
Trigger: TTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGGTA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTTACCCAGAATTACAATaGAGGGCAAAACAAGAGCAA +
Preference number: 5 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLYPELQ*RAKQEQ
Trigger: TTGCTCTTGTTTTGCCCTCAATTGTAATTCTGGGTA...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTCAGCTGGCAGATTACTaGTGTGCAAACTTGATACTT +
Preference number: 5 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGQLADY*CANLIL
Trigger: AAGTATCAAGTTTGCACACAAGTAATCTGCCAGCTG...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp TTGAGGAGACTTCATCTCACTGGCCAACACTCAGTCACATGTACACCTAACTGCTATTTTTATACATTTTaGGATGCACCCAACCCACTC +
Preference number: 5 (lower is better)
Translates to: LRRLHLTGQHSVTCTPNCYFYTF*DAPNPL
Trigger: GAGTGGGTTGGGTGCATCCAAAAATGTATAAAAATA...GCAGTTAGGTGTACATGTGACTGAGTGTTGGCCAGTGAGATGAAGTCTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp CCAGGGCTCCTGTTATATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGTATTTTTATACATTTTaGGATGCACCCAACCCACTC +
Preference number: 5 (lower is better)
Translates to: PGLLLYPQSQQQDEGMKKYFYTF*DAPNPL
Trigger: GAGTGGGTTGGGTGCATCCAAAAATGTATAAAAATA...CTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATATAACAGGAGCCCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp AACACTCAGTCACATGTACACCTAACTGCAAGGACAGCTGAGGAATGTAATGGGTTTTATTGTTGGCAGTaGGATTCAGTAGTACCTACG +
Preference number: 5 (lower is better)
Translates to: NTQSHVHLTARTAEECNGFYCWQ*DSVVPT
Trigger: CGTAGGTACTACTGAATCCAACTGCCAACAATAAAA...CCCATTACATTCCTCAGCTGTCCTTGCAGTTAGGTGTACATGTGACTGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTCCCACTGATGAACAATaGAAGGTAGGGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAPTDEQ*KVGCLI
Trigger: AATGAGACACCCTACCTTCAATTGTTCATCAGTGGG...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTACCTTCCTTGCATCTTaGATACCATTTATGCCATTA +
Preference number: 5 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLTFLAS*IPFMPL
Trigger: TAATGGCATAAATGGTATCAAAGATGCAAGGAAGGT...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp TATCCACAATCCCAGCAGCAAGATGAAGGGATGAAAAAGGACACATGCTGCCTTGAGCAAGAACAAAGTTaGGTGGTGTATAAAATCTGT +
Preference number: 5 (lower is better)
Translates to: YPQSQQQDEGMKKDTCCLEQEQS*VVYKIC
Trigger: ACAGATTTTATACACCACCAAACTTTGTTCTTGCTC...AAGGCAGCATGTGTCCTTTTTCATCCCTTCATCTTGCTGCTGGGATTGTGGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
CDS-3UTR CAA 90 bp AGTAGGGAAGTAGTCAAGGTCTTTCTGGTCTCTAATCTGCCTTACTCTTTGGGTAAGTTCAATAACCTGTaGTCGCGCTTGAATATTGTT +
Preference number: 5 (lower is better)
Translates to: SREVVKVFLVSNLPYSLGKFNNL*SRLNIV
Trigger: AACAATATTCAAGCGCGACAACAGGTTATTGAACTT...ACCCAAAGAGTAAGGCAGATTAGAGACCAGAAAGACCTTGACTACTTCCCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS GCA 90 bp AATATTCAGCATTGGATTCTGGGTACTGGTTTATCCTCATGTTATTaGTCACATCAATCAGGATTTTACCCACAAGCAGATGTCTCAGGT +
Preference number: 5 (lower is better)
Translates to: NIQHWILGTGLSSCY*SHQSGFYPQADVSG
Trigger: ACCTGAGACATCTGCTTGTGGGTAAAATCCTGATTGATGTGAGCAATAACATGAGGATAAACCAGTACCCAGAATCCAATGCTGAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
ENST00000428074.5
ENST00000482369.1
CDS-3UTR CAA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAGGTGCCGTAATAAAGTaGATAAGCAGCTGCCAGAAG +
Preference number: 5 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTGAVIK*ISSCQK
Trigger: CTTCTGGCAGCTGCTTATCAACTTTATTACGGCACC...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS-3UTR CAA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAGGGAGACATGAGGAATaGTTCCTCCCATACCTTCTT +
Preference number: 5 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTGRHEE*FLPYLL
Trigger: AAGAAGGTATGGGAGGAACAATTCCTCATGTCTCCC...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp GCAGCCGCTTTTAAAGAAGTAGAGTCAATAGGAAGACAAATTCCAGTTCCAGCTTATTTTTATACATTTTaGGATGCACCCAACCCACTC +
Preference number: 5 (lower is better)
Translates to: AAAFKEVESIGRQIPVPAYFYTF*DAPNPL
Trigger: GAGTGGGTTGGGTGCATCCAAAAATGTATAAAAATA...AGCTGGAACTGGAATTTGTCTTCCTATTGACTCTACTTCTTTAAAAGCGGCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCAATCTGCCTTACTCTTaGGGTGTGGCTTTGATCCTC +
Preference number: 5 (lower is better)
Translates to: HLLTARPLKNNFSILRSLNLPYS*GVALIL
Trigger: GAGGATCAAAGCCACACCCAAAGAGTAAGGCAGATT...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS CCA 90 bp TCTGGGAATAATGAAGCCAAATATTCAGCATTGGATTCTGGGTACTaGTTTATCCTCATGTTATTGCTCACATCAATCAGGATTTTACCC +
Preference number: 5 (lower is better)
Translates to: SGNNEAKYSALDSGY*FILMLLLTSIRILP
Trigger: GGGTAAAATCCTGATTGATGTGAGCAATAACATGAGGATAAACCAGTACCCAGAATCCAATGCTGAATATTTGGCTTCATTATTCCCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
ENST00000428074.5
ENST00000482369.1
CDS-3UTR CAA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACACCCACTGATGAACAATaGAAGGTAGGGTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTPTDEQ*KVGCLI
Trigger: AATGAGACACCCTACCTTCAATTGTTCATCAGTGGG...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS TCA 90 bp TTTAACACTTCAACTTCGGGAGCTCAATCTAAAAGTCTGTGTCAATaGCATCGTTTTCTTGAATGGGCATTTGACTTGCTGTACACATTT +
Preference number: 5 (lower is better)
Translates to: FNTSTSGAQSKSLCQ*HRFLEWAFDLLYTF
Trigger: AAATGTGTACAGCAAGTCAAATGCCCATTCAAGAAAACGATGTCATTGACACAGACTTTTAGATTGAGCTCCCGAAGTTGAAGTGTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS-3UTR CAA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATAT +
Preference number: 5 (lower is better)
Translates to: HLLTARPLKNNFSILRSLNLLSR*NIVAAY
Trigger: ATATGCAGCAACAATATTCAAGCGCGACAACAGGTT...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS-3UTR CAA 90 bp CATTTATTAACTGCAAGACCTTTGAAAAATAACTTTTCTATCCTTCGGTCCCTCCAGTCTGCCTTAATTTaGGATGAATGCATGATGGAA +
Preference number: 5 (lower is better)
Translates to: HLLTARPLKNNFSILRSLQSALI*DECMME
Trigger: TTCCATCATGCATTCATCCAAAATTAAGGCAGACTG...GAGGGACCGAAGGATAGAAAAGTTATTTTTCAAAGGTCTTGCAGTTAATAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS GCA 90 bp TTCAATTCTCCAAACTTCTTCCTCATTCCAAGAGTTTTCAATATTTaGATGAACCTGCTGATAAGCCATGTTGAGAAACAAATATCTCTC +
Preference number: 5 (lower is better)
Translates to: FNSPNFFLIPRVFNI*MNLLISHVEKQISL
Trigger: GAGAGATATTTGTTTCTCAACATGGCTTATCAGCAGGTTCATGCAAATATTGAAAACTCTTGGAATGAGGAAGAAGTTTGGAGAATTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
CDS-3UTR CAA 90 bp ACTGAAGGGCAGAAAGAATTAATTTTCACTTCATGTAACACACCCAGATTTACAAAGTTCAATAACCTGTaGTCGCGCTTGAATATTGTT +
Preference number: 5 (lower is better)
Translates to: TEGQKELIFTSCNTPRFTKFNNL*SRLNIV
Trigger: AACAATATTCAAGCGCGACAACAGGTTATTGAACTT...TGTAAATCTGGGTGTGTTACATGAAGTGAAAATTAATTCTTTCTGCCCTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
CDS GCA 72 bp CGGAGGCCGGCTTGGCAGCGACGCGCCGCTAGGGGCTaGGTGCCCGGACAGCTCGTGGCGCCGAGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: RRPAWQRRAARG*VPGQLVAPRAR
Trigger: TCGGGCCCTCGGCGCCACGAGCTGTCCGGGCACGCAGCCCCTAGCGGCGCGTCGCTGCCAAGCCGGCCTCCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS GCA 72 bp GGCCGGCTTGGCAGCGACGCGCCGCTAGGGGCTGCGTaGCCGGACAGCTCGTGGCGCCGAGGGCCCGAGGAA +
Preference number: 6 (lower is better)
Translates to: GRLGSDAPLGAA*PDSSWRRGPEE
Trigger: TTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGGGCACGCAGCCCCTAGCGGCGCGTCGCTGCCAAGCCGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS CAA 90 bp CCCACCCGGGGGCCAGGGCCTACGGACTGCACCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTGCTTCCCCG +
Preference number: 6 (lower is better)
Translates to: PTRGPGPTDCTSDWR*QGGCRGGRTPAASP
Trigger: CGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCCCCGGGTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS GCA 72 bp CCCCAAGGGCCCACCCGGGGGCCAGGGCCTACGGACTaGACCTCCGACTGGCGGTTGCAGGGTGGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: PQGPTRGPGPTD*TSDWRLQGGCR
Trigger: GCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCCCCGGGTGGGCCCTTGGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS CCA 72 bp ACCCGGGGGCCAGGGCCTACGGACTGCACCTCCGACTaGCGGTTGCAGGGTGGCTGCCGCGGCGGTCGCACT +
Preference number: 6 (lower is better)
Translates to: TRGPGPTDCTSD*RLQGGCRGGRT
Trigger: AGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCCCCGGGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS TCA 72 bp CCGGACAGCTCGTGGCGCCGAGGGCCCGAGGAACGCTaGCTGGAGTCGGGAAGAGCCGTGGAGCGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: PDSSWRRGPEER*LESGRAVERGE
Trigger: CTCCCCGCGCTCCACGGCTCTTCCCGACTCCAGTCAGCGTTCCTCGGGCCCTCGGCGCCACGAGCTGTCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287908.7
CDS GCA 72 bp GGCCAGGGCCTACGGACTGCACCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GQGLRTAPPTGG*RVAAAAVALQL
Trigger: CAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS CAA 72 bp GGGCCAGGGCCTACGGACTGCACCTCCGACTGGCGGTaGCAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCT +
Preference number: 6 (lower is better)
Translates to: GPGPTDCTSDWR*QGGCRGGRTPA
Trigger: AGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGTAGGCCCTGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS GCA 72 bp ACGGACTGCACCTCCGACTGGCGGTTGCAGGGTGGCTaGCGCGGCGGTCGCACTCCAGCTGCTTCCCCGCCT +
Preference number: 6 (lower is better)
Translates to: TDCTSDWRLQGG*RGGRTPAASPP
Trigger: AGGCGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGGTGCAGTCCGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
ENST00000426158.1
CDS CCA 72 bp ACAGCTCGTGGCGCCGAGGGCCCGAGGAACGCTGACTaGAGTCGGGAAGAGCCGTGGAGCGCGGGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: TARGAEGPRNAD*SREEPWSAGRS
Trigger: ACTCCTCCCCGCGCTCCACGGCTCTTCCCGACTCCAGTCAGCGTTCCTCGGGCCCTCGGCGCCACGAGCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287908.7
CDS GCA 72 bp GTTGCAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTaGTTCCCCGCCTACCCAAGCTGGATCGCGAACAGC +
Preference number: 6 (lower is better)
Translates to: VAGWLPRRSHSS*FPAYPSWIANS
Trigger: GCTGTTCGCGATCCAGCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS GCA 72 bp ACCTCAGGACTTGCCCTTAGCTCTCCGACTGGCGGTTaGAGGGTGGCTGCCGCGGCGGTCGCACTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: TSGLALSSPTGG*RVAAAAVALQL
Trigger: CAGCTGGAGTGCGACCGCCGCGGCAGCCACCCTGCAACCGCCAGTCGGAGAGCTAAGGGCAAGTCCTGAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS CCA 72 bp CGGTCGCACTCCAGCTGCTTCCCCGCCTACCCAAGCTaGATCGCGAACAGCCAGGGGAGAAGGAAGGAGGGA +
Preference number: 6 (lower is better)
Translates to: RSHSSCFPAYPS*IANSQGRRKEG
Trigger: TCCCTCCTTCCTTCTCCCCTGGCTGTTCGCGATCCAGCTTGGGTAGGCGGGGAAGCAGCTGGAGTGCGACCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394626.5
CDS CCA 72 bp AAGATCACCAAGAATATCCTCCTGCGTGGATCTTGCTaGGAGCTGTGCACCAGAGCTGTTCCTAGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: KITKNILLRGSC*ELCTRAVPSRP
Trigger: TGGCCGACTAGGAACAGCTCTGGTGCACAGCTCCCAGCAAGATCCACGCAGGAGGATATTCTTGGTGATCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428074.5
CDS CCA 72 bp GGACACTTCCAAGATCACCAAGAATATCCTCCTGCGTaGATCTTGCTGGGAGCTGTGCACCAGAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: GHFQDHQEYPPA*ILLGAVHQSCS
Trigger: GGAACAGCTCTGGTGCACAGCTCCCAGCAAGATCCACGCAGGAGGATATTCTTGGTGATCTTGGAAGTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428074.5
CDS TCA 72 bp CTCCCCAGTTCTCCAGGCATCATGATCCTGCTGACCTaGGCAGACCACTGTTTCCAAGGGAATGACTCACTA +
Preference number: 6 (lower is better)
Translates to: LPSSPGIMILLT*ADHCFQGNDSL
Trigger: TAGTGAGTCATTCCCTTGGAAACAGTGGTCTGCTCAGGTCAGCAGGATCATGATGCCTGGAGAACTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS GCA 72 bp ATACGGACACTTCCAAGATCACCAAGAATATCCTCCTaGGTGGATCTTGCTGGGAGCTGTGCACCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: IRTLPRSPRISS*VDLAGSCAPEL
Trigger: CAGCTCTGGTGCACAGCTCCCAGCAAGATCCACGCAGGAGGATATTCTTGGTGATCTTGGAAGTGTCCGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428074.5
CDS GCA 72 bp CAAGATCACCAAGAATATCCTGGGACAATGTCTCCTTaGCTTCTTTCTCCTGGGCCCAACCTCAGGACTTGC +
Preference number: 6 (lower is better)
Translates to: QDHQEYPGTMSP*LLSPGPNLRTC
Trigger: GCAAGTCCTGAGGTTGGGCCCAGGAGAAAGAAGGCAAGGAGACATTGTCCCAGGATATTCTTGGTGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394622.6
ENST00000394632.5
CDS TCA 72 bp TGTCATCACATTACTGTGACCCTCTCCGGGGAGACATaGGGAATTGTTCCTCCCATACCTTCTTCCAGAAAT +
Preference number: 6 (lower is better)
Translates to: CHHITVTLSGET*GIVPPIPSSRN
Trigger: ATTTCTGGAAGAAGGTATGGGAGGAACAATTCCTCATGTCTCCCCGGAGAGGGTCACAGTAATGTGATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS CAA 72 bp CAACTGGCGGGCAAGTTCAATAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATATATAAACCTGCCGGCT +
Preference number: 6 (lower is better)
Translates to: QLAGKFNNLLSR*NIVAAYINLPA
Trigger: AGCCGGCAGGTTTATATATGCAGCAACAATATTCAAGCGCGACAACAGGTTATTGAACTTGCCCGCCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
ENST00000482369.1
CDS CAA 72 bp AGGTGGAAATCTCCTATACTTGGTGCCGTAATAAAGTaGATAAGCAGCTGCCAGAAGACCTGCGAGGTATAC +
Preference number: 6 (lower is better)
Translates to: RWKSPILGAVIK*ISSCQKTCEVY
Trigger: GTATACCTCGCAGGTCTTCTGGCAGCTGCTTATCAACTTTATTACGGCACCAAGTATAGGAGATTTCCACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
CDS CAA 72 bp ATGAGTAGAACTTTATATGGCAGCTGTGAACACCATTaGTCATCACATTACTGTGACCCTCTCCGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: MSRTLYGSCEHH*SSHYCDPLRGD
Trigger: GTCTCCCCGGAGAGGGTCACAGTAATGTGATGACAAATGGTGTTCACAGCTGCCATATAAAGTTCTACTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS CAA 90 bp AATGAAATTCAACTGGCGGGCAAGTTCAATAACCTGTTGTCGCGCTaGAATATTGTTGCTGCATATATAAACCTGCCGGCTGGCATCCTT +
Preference number: 6 (lower is better)
Translates to: NEIQLAGKFNNLLSR*NIVAAYINLPAGIL
Trigger: AAGGATGCCAGCCGGCAGGTTTATATATGCAGCAACAATATTCAAGCGCGACAACAGGTTATTGAACTTGCCCGCCAGTTGAATTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
CDS CAA 90 bp GTCAATGGGAATGAAATTCAACTGGCGGGCAAGTTCAATAACCTGTaGTCGCGCTTGAATATTGTTGCTGCATATATAAACCTGCCGGCT +
Preference number: 6 (lower is better)
Translates to: VNGNEIQLAGKFNNL*SRLNIVAAYINLPA
Trigger: AGCCGGCAGGTTTATATATGCAGCAACAATATTCAAGCGCGACAACAGGTTATTGAACTTGCCCGCCAGTTGAATTTCATTCCCATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
CDS TCA 72 bp TTCACTAAGGCTCTTAGGGCTTCCCATCATAGAGATTaGTTCCATGATACGGACACTTCCAAGATCACCAAG +
Preference number: 6 (lower is better)
Translates to: FTKALRASHHRD*FHDTDTSKITK
Trigger: CTTGGTGATCTTGGAAGTGTCCGTATCATGGAATCAATCTCTATGATGGGAAGCCCTAAGAGCCTTAGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
ENST00000426158.1
ENST00000428074.5
ENST00000482369.1
CDS CAA 90 bp AATAATGGCATGAGTAGAACTTTATATGGCAGCTGTGAACACCATTaGTCATCACATTACTGTGACCCTCTCCGGGGAGACATGAGGAAT +
Preference number: 6 (lower is better)
Translates to: NNGMSRTLYGSCEHH*SSHYCDPLRGDMRN
Trigger: ATTCCTCATGTCTCCCCGGAGAGGGTCACAGTAATGTGATGACAAATGGTGTTCACAGCTGCCATATAAAGTTCTACTCATGCCATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
CDS GCA 72 bp TTCCAATTTCCTCTCTTCACTTTCTGGGAAAGGCAATaGCATTCCTTAAAATGCGTCACTCCTTGCACAACA +
Preference number: 6 (lower is better)
Translates to: FQFPLFTFWERQ*HSLKCVTPCTT
Trigger: TGTTGTGCAAGGAGTGACGCATTTTAAGGAATGGCATTGCCTTTCCCAGAAAGTGAAGAGAGGAAATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS TCA 72 bp TCAACTTCGGGAGCTCAATCTAAAAGTCTGTGTCAATaGCATCGTTTTCTTGAATGGGCATTTGACTTGCTG +
Preference number: 6 (lower is better)
Translates to: STSGAQSKSLCQ*HRFLEWAFDLL
Trigger: CAGCAAGTCAAATGCCCATTCAAGAAAACGATGTCATTGACACAGACTTTTAGATTGAGCTCCCGAAGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS CAA 72 bp CACTGTTTCCAAGGGAATGACTCACTAGAAAGGCACTaGTCAAACTTTAATGCAAATATGATCACCTGGGGA +
Preference number: 6 (lower is better)
Translates to: HCFQGNDSLERH*SNFNANMITWG
Trigger: TCCCCAGGTGATCATATTTGCATTAAAGTTTGACAAGTGCCTTTCTAGTGAGTCATTCCCTTGGAAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS CAA 90 bp AAATATTCAGCATTGGATTCTGGGTACTGGTTTATCCTCATGTTATaGCTCACATCAATCAGGATTTTACCCACAAGCAGATGTCTCAGG +
Preference number: 6 (lower is better)
Translates to: KYSALDSGYWFILML*LTSIRILPTSRCLR
Trigger: CCTGAGACATCTGCTTGTGGGTAAAATCCTGATTGATGTGAGCAATAACATGAGGATAAACCAGTACCCAGAATCCAATGCTGAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000287908.7
ENST00000394621.7
ENST00000394622.6
ENST00000394626.5
ENST00000394629.2
ENST00000394632.5
ENST00000402625.6
ENST00000428074.5
ENST00000482369.1
CDS TCA 72 bp CAAGATCACCAAGAATATCCTTTGAATATAGGACGCTaGATAATATGCATGCAGTTCTTTCCCCTTTTCCAC +
Preference number: 6 (lower is better)
Translates to: QDHQEYPLNIGR*IICMQFFPLFH
Trigger: GTGGAAAAGGGGAAAGAACTGCATGCATATTATTCAGCGTCCTATATTCAAAGGATATTCTTGGTGATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394621.7
ENST00000394629.2
ENST00000426158.1
ENST00000482369.1
CDS CAA 90 bp CTTCGGGAGCTCAATCTAAAAGTCTGTGTCAATGACATCGTTTTCTaGAATGGGCATTTGACTTGCTGTACACATTTAATACTTGAGAAT +
Preference number: 6 (lower is better)
Translates to: LRELNLKVCVNDIVF*NGHLTCCTHLILEN
Trigger: ATTCTCAAGTATTAAATGTGTACAGCAAGTCAAATGCCCATTCAAGAAAACGATGTCATTGACACAGACTTTTAGATTGAGCTCCCGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS CAA 90 bp CACTTTCTGGGAAAGGCAATGCCATTCCTTAAAATGCGTCACTCCTaGCACAACATACTTTGTTCCTGTTGTTTCATAATATTCAAAATT +
Preference number: 6 (lower is better)
Translates to: HFLGKAMPFLKMRHS*HNILCSCCFIIFKI
Trigger: AATTTTGAATATTATGAAACAACAGGAACAAAGTATGTTGTGCAAGGAGTGACGCATTTTAAGGAATGGCATTGCCTTTCCCAGAAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482369.1
CDS CAA 72 bp GTCTGTGTCAATGACATCGTTTTCTTGAATGGGCATTaGACTTGCTGTACACATTTAATACTTGAGAATGTA +
Preference number: 6 (lower is better)
Translates to: VCVNDIVFLNGH*TCCTHLILENV
Trigger: TACATTCTCAAGTATTAAATGTGTACAGCAAGTCAAATGCCCATTCAAGAAAACGATGTCATTGACACAGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482369.1