Pregenerated sensors for STEAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164647Ensembl transcript IDs: ENST00000297205.7, ENST00000412573.1
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GTTTTATATCTATCCACTTATTCCAGGCAAAAATCAATGCGTGTATaGTGCCCAGTAGAAGGGAAACAATTCCTAGCTTGCTCTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VLYLSTYSRQKSMRV*CPVEGKQFLACSCG Trigger: TCCACAAGAGCAAGCTAGGAATTGTTTCCCTTCTACTGGGCACAATACACGCATTGATTTTTGCCTGGAATAAGTGGATAGATATAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| 3UTR CAA 72 bp | CTATCCACTTATTCCAGGCAAAAATCAATGCGTGTATaGTGCCCAGTAGAAGGGAAACAATTCCTAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: LSTYSRQKSMRV*CPVEGKQFLAC Trigger: GCAAGCTAGGAATTGTTTCCCTTCTACTGGGCACAATACACGCATTGATTTTTGCCTGGAATAAGTGGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR GCA 90 bp | AAATCAATGCGTGTATTGTGCCCAGTAGAAGGGAAACAATTCCTAGCTTGCTCTTCAATGCGTGTATTGTaGCCAGTAGAAGGGAAACAA | + |
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Preference number: 4 (lower is better) Translates to: KSMRVLCPVEGKQFLACSSMRVL*PVEGKQ Trigger: TTGTTTCCCTTCTACTGGGCACAATACACGCATTGA...AGAGCAAGCTAGGAATTGTTTCCCTTCTACTGGGCACAATACACGCATTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR TCA 90 bp | CTCAGTTTTGTTAATTTTGGTGACGTCTTCCCAACCATGTCTAATCTTCAGTATACAAGGATCCCAGAGTaGTTCTGGCACATCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSFVNFGDVFPTMSNLQYTRIPE*FWHITL Trigger: AAGAGTGATGTGCCAGAATCACTCTGGGATCCTTGT...ATACTGAAGATTAGACATGGTTGGGAAGACGTCACCAAAATTAACAAAACTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CCA 90 bp | TCAGTTTTGTTAATTTTGGTGACGTCTTCCCAACCATGTCTAATCTTCAGTATCCCTAGCTTGCTCTTGTaGAAATTTCCAAAGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: SVLLILVTSSQPCLIFSIPSLLL*KFPKMS Trigger: AGACATCTTTGGAAATTTCCACAAGAGCAAGCTAGG...GATACTGAAGATTAGACATGGTTGGGAAGACGTCACCAAAATTAACAAAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| 3UTR CAA 72 bp | TTCTACAACTGGGAACATATCTCAGTTTTGTTAATTTaGGTGACGTCTTCCCAACCATGTCTAATCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: FYNWEHISVLLI*VTSSQPCLIFS Trigger: ACTGAAGATTAGACATGGTTGGGAAGACGTCACCAAAATTAACAAAACTGAGATATGTTCCCAGTTGTAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CAA 90 bp | ACGTCTTCCCAACCATGTCTAATCTTCAGTATCTTCTTCCTCAAGCATGGCAGGATCTTCTTTATTTTGTaGGACCTGTTGATATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TSSQPCLIFSIFFLKHGRIFFIL*DLLICP Trigger: TGGGCATATCAACAGGTCCAACAAAATAAAGAAGAT...CCTGCCATGCTTGAGGAAGAAGATACTGAAGATTAGACATGGTTGGGAAGACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CAA 90 bp | AGGCAAAAATCAATGCGTGTATTGTGCCCAGTAGAAGGGAAACAATTCCTAGCTAAATCAATGCGTGTATaGTGCCCAGTAGAAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: RQKSMRVLCPVEGKQFLAKSMRV*CPVEGK Trigger: TTTCCCTTCTACTGGGCACAATACACGCATTGATTT...AGCTAGGAATTGTTTCCCTTCTACTGGGCACAATACACGCATTGATTTTTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CAA 90 bp | AATGCGTGTATTGTGCCCAGTAGAAGGGAAACAATTCCTAGCTTGCTCTTGTGGATATCAGGACAACAATaGGAAGGAAAACAGCTATCA | + |
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Preference number: 5 (lower is better) Translates to: NACIVPSRRETIPSLLLWISGQQ*EGKQLS Trigger: TGATAGCTGTTTTCCTTCCAATTGTTGTCCTGATAT...CCACAAGAGCAAGCTAGGAATTGTTTCCCTTCTACTGGGCACAATACACGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CAA 90 bp | ACAATTCCTAGCTTGCTCTTGTGGAAATTTCCAAAGATGTCTACCCATAAACGGTCAGTTTTGTTAATTTaGGTGACGTCTTCCCAACCA | + |
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Preference number: 5 (lower is better) Translates to: TIPSLLLWKFPKMSTHKRSVLLI*VTSSQP Trigger: TGGTTGGGAAGACGTCACCAAAATTAACAAAACTGA...CCGTTTATGGGTAGACATCTTTGGAAATTTCCACAAGAGCAAGCTAGGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CAA 90 bp | TCAGTTTTGTTAATTTTGGTGACGTCTTCCCAACCATGTCTAATCTTCAGTATCATTCCTAGCTTGCTCTaGTGGAAATTTCCAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SVLLILVTSSQPCLIFSIIPSLL*WKFPKM Trigger: CATCTTTGGAAATTTCCACAAGAGCAAGCTAGGAAT...GATACTGAAGATTAGACATGGTTGGGAAGACGTCACCAAAATTAACAAAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS-3UTR CAA 90 bp | TCAGTTTTGTTAATTTTGGTGACGTCTTCCCAACCATGTCTAATCTTCAGTATCGAAACAATTCCTAGCTaGCTCTTGTGGAAATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SVLLILVTSSQPCLIFSIETIPS*LLWKFP Trigger: TGGAAATTTCCACAAGAGCAAGCTAGGAATTGTTTC...GATACTGAAGATTAGACATGGTTGGGAAGACGTCACCAAAATTAACAAAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000412573.1 |
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| CDS CAA 90 bp | GTTTTATATCTATCCACTTATTCCAGGCAAAAATCAATGCGTGTATaGTGCCCAGTAGAAGGGAAACAATTCCTAGCTTGCTCTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: VLYLSTYSRQKSMRV*CPVEGKQFLACSEY Trigger: ATATTCAGAGCAAGCTAGGAATTGTTTCCCTTCTACTGGGCACAATACACGCATTGATTTTTGCCTGGAATAAGTGGATAGATATAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000297205.7 |
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