RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159167

Ensembl transcript IDs: ENST00000290271.7, ENST00000524323.1

Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGCACGCTTAGAGGCTGTGTGGGGACAAAGGCAGCAATGTTTGTaGTGCTGCTGCTGCTGCTGGGTCTGCTGCAATTGCTCTTGGTCC +
Preference number: 1 (lower is better)
Translates to: SARLEAVWGQRQQCL*CCCCCWVCCNCSWS
Trigger: GGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTGTCCCCACACAGCCTCTAAGCGTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 90 bp GTGTGGGGACAAAGGCAGCAATGTTTGTGCTGCTGCTGCTGCTGCTaGGTCTGCTGCAATTGCTCTTGGTCCTTGAGCAGCACGTTACTG +
Preference number: 1 (lower is better)
Translates to: VWGQRQQCLCCCCCC*VCCNCSWSLSSTLL
Trigger: CAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTGTCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 90 bp GGACAAAGGCAGCAATGTTTGTGCTGCTGCTGCTGCTGCTGGGTCTaGTGCAATTGCTCTTGGTCCTTGAGCAGCACGTTACTGGTTTTA +
Preference number: 1 (lower is better)
Translates to: GQRQQCLCCCCCCWV*CNCSWSLSSTLLVL
Trigger: TAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 90 bp CAAAGGCAGCAATGTTTGTGCTGCTGCTGCTGCTGCTGGGTCTGCTaGAATTGCTCTTGGTCCTTGAGCAGCACGTTACTGGTTTTAAAG +
Preference number: 1 (lower is better)
Translates to: QRQQCLCCCCCCWVC*NCSWSLSSTLLVLK
Trigger: CTTTAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 90 bp AAAAATGCCCTTAACAATCTGATGTCAGCACGCTTAGAGGCTGTGTaGGGACAAAGGCAGCAATGTTTGTGCTGCTGCTGCTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: KNALNNLMSARLEAV*GQRQQCLCCCCCCW
Trigger: CCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTGTCCCCACACAGCCTCTAAGCGTGCTGACATCAGATTGTTAAGGGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 90 bp GAGAAGAATCATGCAAACTGGTCTAGGTCAGCCCCCGAATCACTCTaGAGCAAACACAAGACGAAGCTTTGGAAGTTTAAGGGGGAATTG +
Preference number: 1 (lower is better)
Translates to: EKNHANWSRSAPESL*SKHKTKLWKFKGEL
Trigger: CAATTCCCCCTTAAACTTCCAAAGCTTCGTCTTGTGTTTGCTGCAGAGTGATTCGGGGGCTGACCTAGACCAGTTTGCATGATTCTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 90 bp TTTGCCAGAGTACCAGGCACCGATGAAAGGGGACGAGTAAAGAACTaGCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAAGTGGT +
Preference number: 1 (lower is better)
Translates to: FARVPGTDERGRVKN*HFLMYSRPYHTVSG
Trigger: ACCACTTACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCCCCTTTCATCGGTGCCTGGTACTCTGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 90 bp GGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATaGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATA +
Preference number: 1 (lower is better)
Translates to: GKRGYFLLRRGRMVT*ILLVGMLPLQNVGI
Trigger: TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR CCA 90 bp CCTGATTTCCAAGAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTaGGGATGGGACAGTTCTGAGTATAAAAATGCCCTTAACAATCTG +
Preference number: 1 (lower is better)
Translates to: PDFQEAKAVSISLGT*GWDSSEYKNALNNL
Trigger: CAGATTGTTAAGGGCATTTTTATACTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTCTTGGAAATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 90 bp AAAGAGAGAAATTTGCTAGGAATACTCATGAACTACTTGTCGCATTaGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACA +
Preference number: 1 (lower is better)
Translates to: KERNLLGILMNYLSH*GPGLVGFAKWTQHT
Trigger: TGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATTTCTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR TCA 90 bp AGTGACCCTGAGAAACTACTGTTGTTCATAGATAGGTTAGTCGTTTaGCTTTGGTGGTCGCCATCTTGTAAACATCATGGCAGAAATGAT +
Preference number: 1 (lower is better)
Translates to: SDPEKLLLFIDRLVV*LWWSPSCKHHGRND
Trigger: ATCATTTCTGCCATGATGTTTACAAGATGGCGACCACCAAAGTCAAACGACTAACCTATCTATGAACAACAGTAGTTTCTCAGGGTCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 90 bp ATGTCAGCACGCTTAGAGGCTGTGTGGGGACAAAGGCAGCAATGTTaGTGCTGCTGCTGCTGCTGCTGGGTCTGCTGCAATTGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: MSARLEAVWGQRQQC*CCCCCCWVCCNCSW
Trigger: CCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTGTCCCCACACAGCCTCTAAGCGTGCTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR TCA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGGAGGGTACTTTCTCCTaGGGAGAGGCAGAATGGTCA +
Preference number: 2 (lower is better)
Translates to: EAKAVSISLGTWGWDSSEEGTFS*GEAEWS
Trigger: TGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTC...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 90 bp GCAGCAATGTTTGTGCTGCTGCTGCTGCTGCTGGGTCTGCTGCAATaGCTCTTGGTCCTTGAGCAGCACGTTACTGGTTTTAAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: AAMFVLLLLLLGLLQ*LLVLEQHVTGFKGF
Trigger: AAAGCCTTTAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CCA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGCAGTACACTCAAAACTaGTGTGTCAACACCCCTAAA +
Preference number: 2 (lower is better)
Translates to: EAKAVSISLGTWGWDSSEQYTQN*CVNTPK
Trigger: TTTAGGGGTGTTGACACACCAGTTTTGAGTGTACTG...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CCA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGAGCAGGGGAAAAACATaGCAGAGGAAGTTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: EAKAVSISLGTWGWDSSESRGKT*QRKLVK
Trigger: TTTTACCAACTTCCTCTGCCATGTTTTTCCCCTGCT...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 90 bp ATGTTTGTGCTGCTGCTGCTGCTGCTGGGTCTGCTGCAATTGCTCTaGGTCCTTGAGCAGCACGTTACTGGTTTTAAAGGCTTTATGGTA +
Preference number: 2 (lower is better)
Translates to: MFVLLLLLLGLLQLL*VLEQHVTGFKGFMV
Trigger: TACCATAAAGCCTTTAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACATAAGTTTGGGGACCTaGGGATGGGACAGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNISLGT*GWDSSE
Trigger: CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTAT...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACTCACATGGATTTTGTTaGTGGGAATGCTGCCATTGC +
Preference number: 2 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNSHGFC*WECCHC
Trigger: GCAATGGCAGCATTCCCACCAACAAAATCCATGTGA...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 90 bp AGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATGGATTTaGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATATTGATT +
Preference number: 2 (lower is better)
Translates to: RGYFLLRRGRMVTWI*LVGMLPLQNVGILI
Trigger: AATCAATATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR TCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGAGGGTACTTTCTCCTaGGGAGAGGCAGAATGGTCA +
Preference number: 2 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPEGTFS*GEAEWS
Trigger: TGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR TCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACACATCATGGCAGAAATaGTCAAACCACCAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNTSWQK*SNHQLF
Trigger: AAAGAGCTGGTGGTTTGATCATTTCTGCCATGATGT...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTGGCAGAATGGTCACATaGATTTTGTTGGTGGGAATG +
Preference number: 2 (lower is better)
Translates to: VSLSANSTGATVLKGSTSGRMVT*ILLVGM
Trigger: CATTCCCACCAACAAAATCCATGTGACCATTCTGCC...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR CAA 90 bp GAAAGAGAGAAATTTGCTAGGAATACTCATGAACTACTTGTCGCATaGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACAC +
Preference number: 2 (lower is better)
Translates to: EREKFARNTHELLVA*GSWLSWVCKMDTTH
Trigger: GTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATTTCTCTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR TCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGGCTGGAGAGTTACATaGATGTTTTGTGTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPGWRVT*MFCVWG
Trigger: CCCCCAAACACAAAACATTCATGTAACTCTCCAGCC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR GCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTTTTGTTGGTGGGAATaGTGCCATTGCAGAATGTTG +
Preference number: 2 (lower is better)
Translates to: SANSTGATVLKGSTSSNYFCWWE*CHCRML
Trigger: CAACATTCTGCAATGGCAGCATTCCCACCAACAAAA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR CCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACAGCAGGGGAAAAACATaGCAGAGGAAGTTGGTAAAA +
Preference number: 2 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYSRGKT*QRKLVK
Trigger: TTTTACCAACTTCCTCTGCCATGTTTTTCCCCTGCT...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR CCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACGCCATTGCAGAATGTTaGGATATTGATTACAGAAGC +
Preference number: 2 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYAIAEC*DIDYRS
Trigger: GCTTCTGTAATCAATATCCCAACATTCTGCAATGGC...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR CCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCGCCATTGCAGAATGTTaGGATATTGATTACAGAAGC +
Preference number: 2 (lower is better)
Translates to: NKVSLSANSTGATVLKGSAIAEC*DIDYRS
Trigger: GCTTCTGTAATCAATATCCCAACATTCTGCAATGGC...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR TCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAAGAATGTTGGGATATTaGTTACAGAAGCCTAGTTTC +
Preference number: 2 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVRMLGY*LQKPSF
Trigger: GAAACTAGGCTTCTGTAATCAATATCCCAACATTCT...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR GCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTGTTGGTGGGAATGCTaGCATTGCAGAATGTTGGGA +
Preference number: 2 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLCWWEC*HCRMLG
Trigger: TCCCAACATTCTGCAATGGCAGCATTCCCACCAACA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR CCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCAGTACACTCAAAACTaGTGTGTCAACACCCCTAAA +
Preference number: 2 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQQYTQN*CVNTPK
Trigger: TTTAGGGGTGTTGACACACCAGTTTTGAGTGTACTG...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR TCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGAGAATGTTGGGATATTaGTTACAGAAGCCTAGTTTC +
Preference number: 2 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQRMLGY*LQKPSF
Trigger: GAAACTAGGCTTCTGTAATCAATATCCCAACATTCT...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR GCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTTTTGTTGGTGGGAATaGTGCCATTGCAGAATGTTG +
Preference number: 2 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLFCWWE*CHCRML
Trigger: CAACATTCTGCAATGGCAGCATTCCCACCAACAAAA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR CCA 72 bp CAAAGGCAGCAATGTTTGTGCTGCTGCTGCTGCTGCTaGGTCTGCTGCAATTGCTCTTGGTCCTTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: QRQQCLCCCCCC*VCCNCSWSLSS
Trigger: GCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CAA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGCTGCTGCAATTGCTCTaGGTCCTTGAGCAGCACGTT +
Preference number: 3 (lower is better)
Translates to: EAKAVSISLGTWGWDSSELLQLL*VLEQHV
Trigger: AACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAG...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 72 bp CAATGTTTGTGCTGCTGCTGCTGCTGCTGGGTCTGCTaGAATTGCTCTTGGTCCTTGAGCAGCACGTTACTG +
Preference number: 3 (lower is better)
Translates to: QCLCCCCCCWVC*NCSWSLSSTLL
Trigger: CAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 72 bp CAGCAATGTTTGTGCTGCTGCTGCTGCTGCTGGGTCTaGTGCAATTGCTCTTGGTCCTTGAGCAGCACGTTA +
Preference number: 3 (lower is better)
Translates to: QQCLCCCCCCWV*CNCSWSLSSTL
Trigger: TAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp CCCTCCTCCCTCTCTTCCTCTCTTGACATTGACCTTTaGTGGGCAGTGACGCTCATAAGGGACTGTTGGGTT +
Preference number: 3 (lower is better)
Translates to: PSSLSSSLDIDL*WAVTLIRDCWV
Trigger: AACCCAACAGTCCCTTATGAGCGTCACTGCCCACCAAAGGTCAATGTCAAGAGAGGAAGAGAGGGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp TGCTGCTGCTGCTGCTGGGTCTGCTGCAATTGCTCTTaGTCCTTGAGCAGCACGTTACTGGTTTTAAAGGCT +
Preference number: 3 (lower is better)
Translates to: CCCCCWVCCNCS*SLSSTLLVLKA
Trigger: AGCCTTTAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CAA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACCAAAGGCAGCAATGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNQRQQC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTG...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp TCCTCCCTCTCTTCCTCTCTTGACATTGACCTTTGGTaGGCAGTGACGCTCATAAGGGACTGTTGGGTTCAA +
Preference number: 3 (lower is better)
Translates to: SSLSSSLDIDLW*AVTLIRDCWVQ
Trigger: TTGAACCCAACAGTCCCTTATGAGCGTCACTGCCCACCAAAGGTCAATGTCAAGAGAGGAAGAGAGGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp CTTAACAATCTGATGTCAGCACGCTTAGAGGCTGTGTaGGGACAAAGGCAGCAATGTTTGTGCTGCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LNNLMSARLEAV*GQRQQCLCCCC
Trigger: GCAGCAGCAGCACAAACATTGCTGCCTTTGTCCCCACACAGCCTCTAAGCGTGCTGACATCAGATTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CAA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACGCTCATAAGGGACTGTaGGGTTCAAGGACAGTGACC +
Preference number: 3 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNAHKGL*GSRTVT
Trigger: GGTCACTGTCCTTGAACCCAACAGTCCCTTATGAGC...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR GCA 72 bp CATGCAAACTGGTCTAGGTCAGCCCCCGAATCACTCTaGAGCAAACACAAGACGAAGCTTTGGAAGTTTAAG +
Preference number: 3 (lower is better)
Translates to: HANWSRSAPESL*SKHKTKLWKFK
Trigger: CTTAAACTTCCAAAGCTTCGTCTTGTGTTTGCTGCAGAGTGATTCGGGGGCTGACCTAGACCAGTTTGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp CAAGAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTaGGGATGGGACAGTTCTGAGTATAAAAATGCCCTT +
Preference number: 3 (lower is better)
Translates to: QEAKAVSISLGT*GWDSSEYKNAL
Trigger: AAGGGCATTTTTATACTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CAA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTGTGGGAATGCTGCCATaGCAGAATGTTGGGATATTG +
Preference number: 3 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVVGMLP*QNVGIL
Trigger: CAATATCCCAACATTCTGCAATGGCAGCATTCCCAC...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR-3UTR CAA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTGTCACATGGATTTTGTaGGTGGGAATGCTGCCATTG +
Preference number: 3 (lower is better)
Translates to: VSLSANSTGATVLKGSTSVTWIL*VGMLPL
Trigger: CAATGGCAGCATTCCCACCAACAAAATCCATGTGAC...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR GCA 72 bp GTACCAGGCACCGATGAAAGGGGACGAGTAAAGAACTaGCACTTCCTAATGTATAGTAGGCCTTATCACACT +
Preference number: 3 (lower is better)
Translates to: VPGTDERGRVKN*HFLMYSRPYHT
Trigger: AGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCCCCTTTCATCGGTGCCTGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp AGGAATACTCATGAACTACTTGTCGCATTGGGGTCCTaGCTTAGTTGGGTTTGCAAAATGGACACAACACAC +
Preference number: 3 (lower is better)
Translates to: RNTHELLVALGS*LSWVCKMDTTH
Trigger: GTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CCA 72 bp AATTTGCTAGGAATACTCATGAACTACTTGTCGCATTaGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACA +
Preference number: 3 (lower is better)
Translates to: NLLGILMNYLSH*GPGLVGFAKWT
Trigger: TGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CAA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTATCCTGGAATTTCCAGTaGGATGTGACAGAGATCTTT +
Preference number: 3 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVSWNFQ*DVTEIF
Trigger: AAAGATCTCTGTCACATCCAACTGGAAATTCCAGGA...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR TCA 72 bp GAGAAACTACTGTTGTTCATAGATAGGTTAGTCGTTTaGCTTTGGTGGTCGCCATCTTGTAAACATCATGGC +
Preference number: 3 (lower is better)
Translates to: EKLLLFIDRLVV*LWWSPSCKHHG
Trigger: GCCATGATGTTTACAAGATGGCGACCACCAAAGTCAAACGACTAACCTATCTATGAACAACAGTAGTTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR-3UTR CAA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGATGGTCACATGGATTTaGTTGGTGGGAATGCTGCCA +
Preference number: 3 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLMVTWI*LVGMLP
Trigger: TGGCAGCATTCCCACCAACAAAATCCATGTGACCAT...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTGCTGCCGCCGCTGCTaGTGCTGCTGCCACCGCCGC +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYCCRRC*CCCHRR
Trigger: GCGGCGGTGGCAGCAGCAGCAGCAGCGGCGGCAGCA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 72 bp CTGCTGCTGCTGCTGCTGGGTCTGCTGCAATTGCTCTaGGTCCTTGAGCAGCACGTTACTGGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLLLLLGLLQLL*VLEQHVTGFKG
Trigger: GCCTTTAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACGAAGTCAGCCTTGCCTaGGGGTGGGAAGTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNEVSLA*GWEVWE
Trigger: CTCCCACACTTCCCACCCCCAGGCAAGGCTGACTTC...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGGTCGCATTGGGGTCCTaGCTTAGTTGGGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: EAKAVSISLGTWGWDSSEVALGS*LSWVCK
Trigger: TTTGCAAACCCAACTAAGCCAGGACCCCAATGCGAC...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 72 bp TTTGTGCTGCTGCTGCTGCTGCTGGGTCTGCTGCAATaGCTCTTGGTCCTTGAGCAGCACGTTACTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FVLLLLLLGLLQ*LLVLEQHVTGF
Trigger: AAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATGCTGCTGCTGCTGCTaGAGTCGCTGCTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTCCCCC*SRCFLH
Trigger: GTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCA...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTCGCTGCTGCTGCTGCTaGTGCAGTCGCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVRCCCC*CSRCFL
Trigger: CAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCG...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCCGCCGCTGCTGCTGCTaGTGCTGCAGTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSRRCCC*CCSRCF
Trigger: GAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCG...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCATGCTGCTGCCACCGGTaGCTCCGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPCCCHR*LRCCCC
Trigger: GCAGCAGCAGCAGCGGAGGCACCGGTGGCAGCAGCA...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGTCAGCAATCATCCTTTaGAAAGTGGAGCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: EAKAVSISLGTWGWDSSESAIIL*KVEHLR
Trigger: TCGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGA...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GAGGCTAAGGCAGTGTCCATAAGTTTGGGGACCTGGGGATGGGACAGTTCTGAGACGAATGCTTTTCCCTaGGTGTCAAATTTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EAKAVSISLGTWGWDSSETNAFP*VSNLAA
Trigger: CGCTGCTAAATTTGACACTCAGGGAAAAGCATTCGT...CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACGCTGGACGACCTCAGTaGTGGCTTCAGGGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYAGRPQ*WLQGSA
Trigger: AGCGGAACCCTGAAGCCATCACTGAGGTCGTCCAGC...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTGGTGCGTCTCCTGTTaGAGTCAGCTCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSWCVSC*SQLVGV
Trigger: CACACCCACGAGCTGACTTCAACAGGAGACGCACCA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACGGTTCCGCTTGGCGATaGTGCACACATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNGSAWR*CTHSAC
Trigger: GCAAGCTGAATGTGTGCAGCATCGCCAAGCGGAACC...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACCAATGTTTGTGCTGCTaGTGCTGCTGCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNQCLCC*CCCWVC
Trigger: GCAGACCCAGCAGCAGCAGCAGCAGCACAAACATTG...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATTGGTGCGTCTCCTGTTaGAGTCAGCTCGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDWCVSC*SQLVGV
Trigger: CACACCCACGAGCTGACTTCAACAGGAGACGCACCA...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTTGCTGCTGCTGGGTCTaGTGCAATTGCTCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVCCCWV*CNCSWS
Trigger: GGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCA...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATATGGAGCACCTCCGAATaGCGAGGAAGACCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MVTWILLVGMLPLQNVGIWSTSE*RGRPWR
Trigger: CCTCCAAGGTCTTCCTCGCCATTCGGAGGTGCTCCA...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACCTTCAGGGTTCCGCTTaGCGATGCTGCACACATTCA +
Preference number: 4 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNLQGSA*RCCTHS
Trigger: TGAATGTGTGCAGCATCGCCAAGCGGAACCCTGAAG...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATGCAGGCTCAAAGTCTaGTTGGACAGCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTCRLKV*LDSQAQ
Trigger: TTGAGCCTGGCTGTCCAACCAGACTTTGAGCCTGCA...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR CAA 72 bp TGCTGCTGCTGGGTCTGCTGCAATTGCTCTTGGTCCTaGAGCAGCACGTTACTGGTTTTAAAGGCTTTATGG +
Preference number: 4 (lower is better)
Translates to: CCCWVCCNCSWS*SSTLLVLKALW
Trigger: CCATAAAGCCTTTAAAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTCCTGTAGAGCACTGTTaGGGCAACGAACCACTTCAG +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVPVEHC*GNEPLQ
Trigger: CTGAAGTGGTTCGTTGCCTCAACAGTGCTCTACAGG...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCGGAAGACCTTGGAGGTaGCCCCGTTGGCGATGCATT +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSGRPWR*PRWRCI
Trigger: AATGCATCGCCAACGGGGTCACCTCCAAGGTCTTCC...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTTATCTGTTGGAGAAGTaGTTGGGCAGCTGGACGACC +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVYLLEK*LGSWTT
Trigger: GGTCGTCCAGCTGCCCAATCACTTCTCCAACAGATA...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATACACCTCGGAGGTTCCTaGGGAGGACTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: MVTWILLVGMLPLQNVGIHLGGS*GGLSAS
Trigger: AGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTG...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTGAGGGTACTTTCTCCTaGGGAGAGGCAGAATGGTCA +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVEGTFS*GEAEWS
Trigger: TGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTC...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATCTCCGCCTCATGGGTTaGAGAAGCACTGATCACCAG +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDLRLMG*RSTDHQ
Trigger: CTGGTGATCAGTGCTTCTGCAACCCATGAGGCGGAG...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTCTCACAGAGTCATTCTaGTCCGCCTCATGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVLTESF*SASWVA
Trigger: TGCAACCCATGAGGCGGAGCAGAATGACTCTGTGAG...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTAGGACTTTCAGCTTCTaGGGCTCATTGGTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVRTFSF*GSLVRL
Trigger: GAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCT...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACCAGAGATGGTCCAGCTaGCAGGACTACTTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYQRWSS*QDYFGR
Trigger: CCTGCCAAAGTAGTCCTGGCAGCTGGACCATCTCTG...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTTGGGTCTGCTGCAATTaGTCTTGGTCCTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVWVCCN*SWSLSS
Trigger: GCTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCA...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTGCTGCTGGGTCTGCTaGAATTGCTCTTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSCCWVC*NCSWSL
Trigger: CAAGGACCAAGAGCAATTGCAGCAGACCCAGCAGCA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTGCCCCCGAATCACTCTaGAGCAAACACAAGACGAAG +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSAPESL*SKHKTK
Trigger: CTTCGTCTTGTGTTTGCTGCAGAGTGATTCGGGGGC...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATCATCCTTTGGAAAGTaGAGCACCTCCGAATGGCGA +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTSSFGK*STSEWR
Trigger: TCGCCATTCGGAGGTGCTCCACTTTCCAAAGGATGA...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTGTTGGAGAAGTGATTaGGCAGCTGGACGACCTCAG +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSCWRSD*AAGRPQ
Trigger: CTGAGGTCGTCCAGCTGCCCAATCACTTCTCCAACA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATCTGTCTGCAGGATGTaGAAGAGGCTGGCCATGTTA +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTSVCRM*KRLAML
Trigger: TAACATGGCCAGCCTCTTCCACATCCTGCAGACAGA...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTGTTGAAGTCAGCTCGTaGGTGTGTTTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSVEVSS*VCLGTV
Trigger: CACTGTGCCCAAACACACCCACGAGCTGACTTCAAC...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
3UTR CAA 72 bp ATTGATTTAATGGAAAGTCTCCCACCCCATCATCATTaGCCAGAGTACCAGGCACCGATGAAAGGGGACGAG +
Preference number: 4 (lower is better)
Translates to: IDLMESLPPHHH*PEYQAPMKGDE
Trigger: CTCGTCCCCTTTCATCGGTGCCTGGTACTCTGGCAAATGATGATGGGGTGGGAGACTTTCCATTAAATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 72 bp CCTGATTTCCAAGAGGCTAAGGCAGTGTCCATAAGTTaGGGGACCTGGGGATGGGACAGTTCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: PDFQEAKAVSIS*GTWGWDSSEYK
Trigger: TTTATACTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTATGGACACTGCCTTAGCCTCTTGGAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGGCTGGACGACCTCAGTaGTGGCTTCAGGGTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQAGRPQ*WLQGSA
Trigger: AGCGGAACCCTGAAGCCATCACTGAGGTCGTCCAGC...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTATCTGTTGGAGAAGTaGTTGGGCAGCTGGACGACC +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYYLLEK*LGSWTT
Trigger: GGTCGTCCAGCTGCCCAATCACTTCTCCAACAGATA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCCACCTCGGAGGTTCCTaGGGAGGACTTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSHLGGS*GGLSAS
Trigger: AGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTG...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAGGCTGGAGAGTTACATaGATGTTTTGTGTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTGWRVT*MFCVWG
Trigger: CCCCCAAACACAAAACATTCATGTAACTCTCCAGCC...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAGATAGGTTAGTCGTTTaGCTTTGGTGGTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTDRLVV*LWWSPS
Trigger: AGATGGCGACCACCAAAGTCAAACGACTAACCTATC...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATAGGGGGTACCACGGTTTaGAGAGGTCACAGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: MVTWILLVGMLPLQNVGIGGTTV*RGHSQK
Trigger: TTTTTGGCTGTGACCTCTTCAAACCGTGGTACCCCC...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTGCTAGGCTTATGCAATaGAATACCCTCAGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVARLMQ*NTLSRA
Trigger: CGCTCTGCTGAGGGTATTTCATTGCATAAGCCTAGC...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR GCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTGCAGTCGCTGCTTCTTaGACCTCTGGCTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVAVAAS*TSGFCK
Trigger: TTTGCAAAAGCCAGAGGTGCAAGAAGCAGCGACTGC...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATAGGACTTTCAGCTTCTaGGGCTCATTGGTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDRTFSF*GSLVRL
Trigger: GAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCT...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACACCTCTCCCTGGTTATaGACTCTCATGGGATGTGCG +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYTSPWL*TLMGCA
Trigger: CGCACATCCCATGAGAGTGCATAACCAGGGAGAGGT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATAACCTCTCCCTGGTTATaGACTCTCATGGGATGTGCG +
Preference number: 4 (lower is better)
Translates to: MVTWILLVGMLPLQNVGITSPWL*TLMGCA
Trigger: CGCACATCCCATGAGAGTGCATAACCAGGGAGAGGT...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACTGTTGGTGGGAATGCTaGCATTGCAGAATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNCWWEC*HCRMLG
Trigger: TCCCAACATTCTGCAATGGCAGCATTCCCACCAACA...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACCACCCCATCATCATTTaGCAGAGTACCAGGCACCGA +
Preference number: 4 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYHPIII*QSTRHR
Trigger: TCGGTGCCTGGTACTCTGGCAAATGATGATGGGGTG...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACACATCTGTGTCACAGGTaGAGTTTTCCAGGCATGCAA +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTHLCHR*SFPGMQ
Trigger: TTGCATGCCTGGAAAACTCCACCTGTGACACAGATG...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGTCAAGAGTAGCCTCTaGGTTGAGGTGGGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPVKSSL*VEVGWE
Trigger: CTCCCAGCCCACCTCAACCCAGAGGCTACTCTTGAC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATGCTGCAATTGCTCTTaGTCCTTGAGCAGCACGTTA +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTCCNCS*SLSSTL
Trigger: TAACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCA...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATCGCTTAGAGGCTGTGTaGGGACAAAGGCAGCAATGT +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDRLEAV*GQRQQC
Trigger: ACATTGCTGCCTTTGTCCCCACACAGCCTCTAAGCG...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp AATTTGCTAGGAATACTCATGAACTACTTGTCGCATTGGGGTCCTGGCTTAGTTTTCCCTCTCCTGGCTTaGGTGAAGATGTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: NLLGILMNYLSHWGPGLVFPLLA*VKMWIW
Trigger: CCAGATCCACATCTTCACTCAAGCCAGGAGAGGGAA...AACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAACGAATGCTTTTCCCTaGGTGTCAAATTTAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTTNAFP*VSNLAA
Trigger: CGCTGCTAAATTTGACACTCAGGGAAAAGCATTCGT...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAGTACCAGGCACCGATaGAAGGGGACGAGTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYSTRHR*KGTSKE
Trigger: TTCTTTACTCGTCCCCTTTCATCGGTGCCTGGTACT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTTGCACACATTCAGCTTaGTGTAGCACTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVCTHSA*CSTLPA
Trigger: TGCAGGAAGAGTGCTACAGCAAGCTGAATGTGTGCA...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGCAGAGAAGTCAGCCTTaGCTGGGGGTGGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQQRSQP*LGVGSV
Trigger: CACACTTCCCACCCCCAGGCAAGGCTGACTTCTCTG...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTGAGCGCTTTGAAGCATaGCAACATTCAAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVERFEA*QHSSLS
Trigger: GGAAAGGCTTGAATGTTGGCATGCTTCAAAGCGCTC...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTCATCCTTTGGAAAGTaGAGCACCTCCGAATGGCGA +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYSSFGK*STSEWR
Trigger: TCGCCATTCGGAGGTGCTCCACTTTCCAAAGGATGA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATTCTGTCTGCAGGATGTaGAAGAGGCTGGCCATGTTA +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDSVCRM*KRLAML
Trigger: TAACATGGCCAGCCTCTTCCACATCCTGCAGACAGA...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTATGCAGGCTCAAAGTCTaGTTGGACAGCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVCRLKV*LDSQAQ
Trigger: TTGAGCCTGGCTGTCCAACCAGACTTTGAGCCTGCA...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCTGCCAGGACTACTTTaGCAGGCAGCGTGCTACAGG +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQLPGLL*QAACYR
Trigger: CCTGTAGCACGCTGCCTGCCAAAGTAGTCCTGGCAG...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTCTTGACATTGACCTTTaGTGGGCAGTGACGCTCATA +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSLDIDL*WAVTLI
Trigger: TATGAGCGTCACTGCCCACCAAAGGTCAATGTCAAG...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCACTACCTAAGCGAGTTTaGAGTGGCCCCTGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPLPKRV*SGPCSP
Trigger: AGGACTGCAGGGGCCACTCCAAACTCGCTTAGGTAG...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTTGGGGACCTGGGGATaGGACAGTTCTGAGTATAAA +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSLGTWG*DSSEYK
Trigger: TTTATACTCAGAACTGTCCCATCCCCAGGTCCCCAA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATATAAGTTTGGGGACCTaGGGATGGGACAGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDISLGT*GWDSSE
Trigger: CTCAGAACTGTCCCATCCCCAGGTCCCCAAACTTAT...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGGGTTCCGCTTGGCGATaGTGCACACATTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQGSAWR*CTHSAC
Trigger: GCAAGCTGAATGTGTGCAGCATCGCCAAGCGGAACC...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACAAAGGAGCTCCACTaGCTAAGGCTATTGGATTAC +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVTKELH*LRLLDY
Trigger: GTAATCCAATAGCCTTAGGCAGTGGAGCTCCTTTGT...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCATGTTGGAGAAGTGATTaGGCAGCTGGACGACCTCAG +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPCWRSD*AAGRPQ
Trigger: CTGAGGTCGTCCAGCTGCCCAATCACTTCTCCAACA...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGATGTGCGTTTGATGTaGGAGGGAGAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPDVRLM*EGESSS
Trigger: TGAGGAGGACTCTCCCTCCCACATCAAACGCACATC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATGGTTATGCACTCTCATaGGATGTGCGTTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDGYALS*DVRLMW
Trigger: CCACATCAAACGCACATCCCATGAGAGTGCATAACC...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTCATGGATTTTGTTGGTaGGAATGCTGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVHGFCW*ECCHCR
Trigger: TCTGCAATGGCAGCATTCCCACCAACAAAATCCATG...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGCAGAATGGTCACATaGATTTTGTTGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVGRMVT*ILLVGM
Trigger: CATTCCCACCAACAAAATCCATGTGACCATTCTGCC...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATTGGGTTGAGGTGGGCTaGGAGATTAACATCTTACCT +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDWVEVG*EINILP
Trigger: AGGTAAGATGTTAATCTCCCAGCCCACCTCAACCCA...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCAACTACTTGTCGCATTaGGGTCCTGGCTTAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSNYLSH*GPGLVG
Trigger: CCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTT...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACAAGAATCATGCAAACTaGTCTAGGTCAGCCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYKNHAN*SRSAPE
Trigger: TTCGGGGGCTGACCTAGACCAGTTTGCATGATTCTT...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGACTTCAGCTGAGTTTTaGGCCGCCACTCGGGATTTC +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQTSAEF*AATRDF
Trigger: GAAATCCCGAGTGGCGGCTCAAAACTCAGCTGAAGT...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGGGAAGACCTTGGAGGTaGCCCCGTTGGCGATGCATT +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLGRPWR*PRWRCI
Trigger: AATGCATCGCCAACGGGGTCACCTCCAAGGTCTTCC...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACAGTTTGGTGAGGTTGTaGATAACCTCTCCCTGGTTA +
Preference number: 4 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYSLVRL*ITSPWL
Trigger: TAACCAGGGAGAGGTTATTCACAACCTCACCAAACT...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAATTGCTCTTGGTCCTTaGGCAGCACGTTACTGGTTT +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVIALGP*AARYWF
Trigger: AAACCAGTAACGTGCTGCTCAAGGACCAAGAGCAAT...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTTTTGTTGGTGGGAATaGTGCCATTGCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSFCWWE*CHCRML
Trigger: CAACATTCTGCAATGGCAGCATTCCCACCAACAAAA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTTTAGATGCAAGAAGATaGAGGCTCAAAGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVLDARR*RLKVWL
Trigger: CAACCAGACTTTGAGCCTGCATCTTCTTGCATCTAA...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTGTTTGTGCTGCTGCTaGTGCTGCTGGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLCLCCC*CCWVCC
Trigger: GCAGCAGACCCAGCAGCAGCAGCAGCAGCACAAACA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTGGCTTAGTTGGGTTTaGAAAATGGACACAACACAC +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSWLSWV*KMDTTH
Trigger: GTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCACTCCAAGAGGGTACGTaGCAGATTTCAGGCAATCAG +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPLQEGT*QISGNQ
Trigger: CTGATTGCCTGAAATCTGGCACGTACCCTCTTGGAG...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CCA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGCCACTCGGGATTTCCTaGGGCTCACAGAGTCATTCT +
Preference number: 4 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQPLGIS*GSQSHS
Trigger: AGAATGACTCTGTGAGCCCCAGGAAATCCCGAGTGG...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGGATGTGCGTTTGATGTaGGAGGGAGAGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQDVRLM*EGESSS
Trigger: TGAGGAGGACTCTCCCTCCCACATCAAACGCACATC...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTCAGTACACTCAAAACTaGTGTGTCAACACCCCTAAA +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVQYTQN*CVNTPK
Trigger: TTTAGGGGTGTTGACACACCAGTTTTGAGTGTACTG...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAGCCATTGCAGAATGTTaGGATATTGATTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTAIAEC*DIDYRS
Trigger: GCTTCTGTAATCAATATCCCAACATTCTGCAATGGC...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATCATGGATTTTGTTGGTaGGAATGCTGCCATTGCAGA +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDHGFCW*ECCHCR
Trigger: TCTGCAATGGCAGCATTCCCACCAACAAAATCCATG...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATTCACATGGATTTTGTTaGTGGGAATGCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDSHGFC*WECCHC
Trigger: GCAATGGCAGCATTCCCACCAACAAAATCCATGTGA...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGGCCTCTGGGTTGAGGTaGGCTGGGAGATTAACATCT +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQASGLR*AGRLTS
Trigger: AGATGTTAATCTCCCAGCCCACCTCAACCCAGAGGC...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGACATTGACCTTTGGTaGGCAGTGACGCTCATAAGG +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPDIDLW*AVTLIR
Trigger: CCTTATGAGCGTCACTGCCCACCAAAGGTCAATGTC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTATTTTAAGCTCTCTTTaGCGAATGCTTTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVILSSL*RMLFPE
Trigger: CTCAGGGAAAAGCATTCGTCAAAGAGAGCTTAAAAT...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAAGAATGTTGGGATATTaGTTACAGAAGCCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTRMLGY*LQKPSF
Trigger: GAAACTAGGCTTCTGTAATCAATATCCCAACATTCT...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACGTGGATATCTGGAAGTaGGATAGTTATTCCATTCCC +
Preference number: 4 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYVDIWK*DSYSIP
Trigger: GGGAATGGAATAACTATCTCACTTCCAGATATCCAC...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTGCTGCTGCAGTCGCTaGTTCTTGCACCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLCCCSR*FLHLWL
Trigger: AAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCATGTTGGTGGGAATGCTaGCATTGCAGAATGTTGGGA +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPCWWEC*HCRMLG
Trigger: TCCCAACATTCTGCAATGGCAGCATTCCCACCAACA...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTTAGATGCAAGAAGATaGAGGCTCAAAGTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYLDARR*RLKVWL
Trigger: CAACCAGACTTTGAGCCTGCATCTTCTTGCATCTAA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGAGGCAGCAATGTTTGTaGTGCTGCTGCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLRQQCL*CCCCCW
Trigger: CCAGCAGCAGCAGCAGCAGCACAAACATTGCTGCCT...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACATCAGGCTAGGCTTATaGAATGAAATACCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYIRLGL*NEIPSA
Trigger: TGCTGAGGGTATTTCATTGCATAAGCCTAGCCTGAT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCATCAGCAATCATCCTTTaGAAAGTGGAGCACCTCCGA +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPSAIIL*KVEHLR
Trigger: TCGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGA...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTGTTATAGTATCTGTTaGAGAAGTGATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSCYSIC*RSDWAA
Trigger: AGCTGCCCAATCACTTCTCCAACAGATACTATAACA...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGGTTATGCACTCTCATaGGATGTGCGTTTGATGTGG +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPGYALS*DVRLMW
Trigger: CCACATCAAACGCACATCCCATGAGAGTGCATAACC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTATCACATGGATTTTGTTaGTGGGAATGCTGCCATTGC +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVSHGFC*WECCHC
Trigger: GCAATGGCAGCATTCCCACCAACAAAATCCATGTGA...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTCCCTATCACTCGATTTaGTCAAATCTTGAGTTTAGC +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVPYHSI*SNLEFS
Trigger: GCTAAACTCAAGATTTGACCAAATCGAGTGATAGGG...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACCACAAGACGAAGCTTTaGAAGTTTAAGGGGGAATTG +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYHKTKL*KFKGEL
Trigger: CAATTCCCCCTTAAACTTCCAAAGCTTCGTCTTGTG...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACGCTATTGGATTACACTaGCAGTTTATTGCCATCAGG +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYAIGLH*QFIAIR
Trigger: CCTGATGGCAATAAACTGCCAGTGTAATCCAATAGC...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1
3UTR CAA 72 bp AAATTTGCTAGGAATACTCATGAACTACTTGTCGCATaGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGAC +
Preference number: 4 (lower is better)
Translates to: KFARNTHELLVA*GSWLSWVCKMD
Trigger: GTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
3UTR CAA 72 bp AAAGAGAGAAATTTGCTAGGAATACTCATGAACTACTaGTCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: KERNLLGILMNY*SHWGPGLVGFA
Trigger: TGCAAACCCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATTTCTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTATTTTGGAGCATTCTCTaGGAAGTTTCCGCTAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVFWSIL*EVSAKL
Trigger: CAACTTAGCGGAAACTTCTCAGAGAATGCTCCAAAA...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTAGAATGTTGGGATATTaGTTACAGAAGCCTAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSLSANSTGATVLKGSTSRMLGY*LQKPSF
Trigger: GAAACTAGGCTTCTGTAATCAATATCCCAACATTCT...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAACATCATGGCAGAAATaGTCAAACCACCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVTSWQK*SNHQLF
Trigger: AAAGAGCTGGTGGTTTGATCATTTCTGCCATGATGT...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCGCTCTCTTTGACGAATaGTTTTCCCTGAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSALFDE*FSLSVK
Trigger: TTTGACACTCAGGGAAAAGCATTCGTCAAAGAGAGC...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR GCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCTTTTGTTGGTGGGAATaGTGCCATTGCAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSFCWWE*CHCRML
Trigger: CAACATTCTGCAATGGCAGCATTCCCACCAACAAAA...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTTCTGCTCCGCCTCATaGGTTGCAGAAGCACTGATC +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLFCSAS*VAEALI
Trigger: GATCAGTGCTTCTGCAACCCATGAGGCGGAGCAGAA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGCTTCAGGGTTCCGCTTaGCGATGCTGCACACATTCA +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLLQGSA*RCCTHS
Trigger: TGAATGTGTGCAGCATCGCCAAGCGGAACCCTGAAG...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGGTTGAAGTCAGCTCGTaGGTGTGTTTGGGCACAGTG +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLVEVSS*VCLGTV
Trigger: CACTGTGCCCAAACACACCCACGAGCTGACTTCAAC...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACATTCATATTCGTCCATaGCCAGCACAGATTCATAAC +
Preference number: 4 (lower is better)
Translates to: SANSTGATVLKGSTSSNYIHIRP*PAQIHN
Trigger: GTTATGAATCTGTGCTGGCCATGGACGAATATGAAT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAGCTCTTTTTGGTTCCTaGAATTTCCAGTTGGATGTG +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVALFGS*NFQLDV
Trigger: CACATCCAACTGGAAATTCCAGGAACCAAAAAGAGC...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTATGCTTTTCATTTTTCTaGAGATGTGCCCTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVCFSFF*RCALSP
Trigger: AGGAGAGAGGGCACATCTCCAGAAAAATGAAAAGCA...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGCTCTCCTGGCTTGAGTaGAGATGTGGATCTGGATAC +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLLSWLE*RCGSGY
Trigger: GTATCCAGATCCACATCTTCACTCAAGCCAGGAGAG...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGCTCTCTTTGACGAATaGTTTTCCCTGAGTGTCAAA +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPALFDE*FSLSVK
Trigger: TTTGACACTCAGGGAAAAGCATTCGTCAAAGAGAGC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAATTCATATTCGTCCATaGCCAGCACAGATTCATAAC +
Preference number: 4 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVIHIRP*PAQIHN
Trigger: GTTATGAATCTGTGCTGGCCATGGACGAATATGAAT...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTTTAAGCAGAGTCCTCTaGAATTTATGTACAGTACAT +
Preference number: 4 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVLSRVL*NLCTVH
Trigger: ATGTACTGTACATAAATTCCAGAGGACTCTGCTTAA...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGTTATCACACTGTAAGTaGTCCAAGCCCATAGGGATG +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQLSHCK*SKPIGM
Trigger: CATCCCTATGGGCTTGGACCACTTACAGTGTGATAA...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR TCA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCAAACTAGCAACATTGTaGGAACTGCTTCTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: NKVSLSANSTGATVLKGSKLATL*ELLLSV
Trigger: TACAGAAAGAAGCAGTTCTCACAATGTTGCTAGTTT...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR GCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTGCACACATTCAGCTTaGTGTAGCACTCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLCTHSA*CSTLPA
Trigger: TGCAGGAAGAGTGCTACAGCAAGCTGAATGTGTGCA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGCATCTGTGTCACAGGTaGAGTTTTCCAGGCATGCAA +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLHLCHR*SFPGMQ
Trigger: TTGCATGCCTGGAAAACTCCACCTGTGACACAGATG...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGCAGTACACTCAAAACTaGTGTGTCAACACCCCTAAA +
Preference number: 4 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQQYTQN*CVNTPK
Trigger: TTTAGGGGTGTTGACACACCAGTTTTGAGTGTACTG...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGAGCAGGGGAAAAACATaGCAGAGGAAGTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQSRGKT*QRKLVK
Trigger: TTTTACCAACTTCCTCTGCCATGTTTTTCCCCTGCT...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATATTAAGCAGAGTCCTCTaGAATTTATGTACAGTACAT +
Preference number: 4 (lower is better)
Translates to: MVTWILLVGMLPLQNVGILSRVL*NLCTVH
Trigger: ATGTACTGTACATAAATTCCAGAGGACTCTGCTTAA...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGATTTTAAGCTCTCTTTaGCGAATGCTTTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQILSSL*RMLFPE
Trigger: CTCAGGGAAAAGCATTCGTCAAAGAGAGCTTAAAAT...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR TCA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAATTTCCAGTTGGATGTaGCAGAGATCTTTCAGTATA +
Preference number: 4 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPISSWM*QRSFSI
Trigger: TATACTGAAAGATCTCTGTCACATCCAACTGGAAAT...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CCA 90 bp AGCTCATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGTGTTATAGTATCTGTTaGAGAAGTGATTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLEIKNSNVTFIFVHGQCYSIC*RSDWAA
Trigger: AGCTGCCCAATCACTTCTCCAACAGATACTATAACA...CTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAATGAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CCA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGGGCAGAATGGTCACATaGATTTTGTTGGTGGGAATG +
Preference number: 4 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLGRMVT*ILLVGM
Trigger: CATTCCCACCAACAAAATCCATGTGACCATTCTGCC...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS GCA 90 bp TGCTGCTGCTGCTGCCGCCGCTGCTGCTGCTGCTGCCACCGCCGCTaGTGCTGCTGCTGCTGCAGTCGCTGCTTCTTGCACCTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: CCCCCRRCCCCCHRR*CCCCCSRCFLHLWL
Trigger: AAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCGGCGGCAGCAGCAGCAGCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 90 bp TGCTGCTGCTGCCGCCGCTGCTGCTGCTGCTGCCACCGCCGCTGCTaGTGCTGCTGCTGCAGTCGCTGCTTCTTGCACCTCTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CCCCRRCCCCCHRRC*CCCCSRCFLHLWLL
Trigger: CAAAAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCGGCGGCAGCAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 90 bp TGCTGCTGCCGCCGCTGCTGCTGCTGCTGCCACCGCCGCTGCTGCTaGTGCTGCTGCAGTCGCTGCTTCTTGCACCTCTGGCTTTTGCAA +
Preference number: 5 (lower is better)
Translates to: CCCRRCCCCCHRRCC*CCCSRCFLHLWLLQ
Trigger: TTGCAAAAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCGGCGGCAGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 90 bp TGCTGCCGCCGCTGCTGCTGCTGCTGCCACCGCCGCTGCTGCTGCTaGTGCTGCAGTCGCTGCTTCTTGCACCTCTGGCTTTTGCAAACT +
Preference number: 5 (lower is better)
Translates to: CCRRCCCCCHRRCCC*CCSRCFLHLWLLQT
Trigger: AGTTTGCAAAAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCGGCGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 90 bp GAGTCCTCCTCACCTCGGAGGTTCCTGAGGAGGACTTTCAGCTTCTaGGGCTCATTGGTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: ESSSPRRFLRRTFSF*GSLVRLLLKSARGC
Trigger: ACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTGAGGAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 90 bp GTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGTGTTTGGGCACAGTaGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCATGTTAGGCCCA +
Preference number: 5 (lower is better)
Translates to: VRLLLKSARGCVWAQ*SVCRMWKRLAMLGP
Trigger: TGGGCCTAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 90 bp GGCTCATTGGTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGTGTTTaGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCATG +
Preference number: 5 (lower is better)
Translates to: GSLVRLLLKSARGCV*AQWSVCRMWKRLAM
Trigger: CATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 90 bp ACTCGGGATTTCCTGGGGCTCACAGAGTCATTCTGCTCCGCCTCATaGGTTGCAGAAGCACTGATCACCAGCACCAGAAGCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TRDFLGLTESFCSAS*VAEALITSTRSTAE
Trigger: CTCAGCAGTGCTTCTGGTGCTGGTGATCAGTGCTTCTGCAACCCATGAGGCGGAGCAGAATGACTCTGTGAGCCCCAGGAAATCCCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS CCA 90 bp CAGCTTCTGCGGCTCATTGGTGCGTCTCCTGTTGAAGTCAGCTCGTaGGTGTGTTTGGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QLLRLIGASPVEVSS*VCLGTVVCLQDVEE
Trigger: CTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 90 bp AACGAACCACTTCAGCTGAGTTTTGAGCCGCCACTCGGGATTTCCTaGGGCTCACAGAGTCATTCTGCTCCGCCTCATGGGTTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: NEPLQLSFEPPLGIS*GSQSHSAPPHGLQK
Trigger: CTTCTGCAACCCATGAGGCGGAGCAGAATGACTCTGTGAGCCCCAGGAAATCCCGAGTGGCGGCTCAAAACTCAGCTGAAGTGGTTCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS CCA 90 bp TCAGCTCGTGGGTGTGTTTGGGCACAGTGGTCTGTCTGCAGGATGTaGAAGAGGCTGGCCATGTTAGGCCCAATTTTCTCCATCAGGCTG +
Preference number: 5 (lower is better)
Translates to: SARGCVWAQWSVCRM*KRLAMLGPIFSIRL
Trigger: CAGCCTGATGGAGAAAATTGGGCCTAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS GCA 90 bp CTGTTGAAGTCAGCTCGTGGGTGTGTTTGGGCACAGTGGTCTGTCTaGAGGATGTGGAAGAGGCTGGCCATGTTAGGCCCAATTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LLKSARGCVWAQWSV*RMWKRLAMLGPIFS
Trigger: GGAGAAAATTGGGCCTAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAGCTGCCAGGACTACTTaGGCAGGCAGCGTGCTACAG +
Preference number: 5 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTAARTT*AGSVLQ
Trigger: CTGTAGCACGCTGCCTGCCAAAGTAGTCCTGGCAGC...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS TCA 90 bp TATAGTATCTGTTGGAGAAGTGATTGGGCAGCTGGACGACCTCAGTaGTGGCTTCAGGGTTCCGCTTGGCGATGCTGCACACATTCAGCT +
Preference number: 5 (lower is better)
Translates to: YSICWRSDWAAGRPQ*WLQGSAWRCCTHSA
Trigger: AGCTGAATGTGTGCAGCATCGCCAAGCGGAACCCTGAAGCCATCACTGAGGTCGTCCAGCTGCCCAATCACTTCTCCAACAGATACTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATAATGGCGAGGAAGACCTaGGAGGTGACCCCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: MVTWILLVGMLPLQNVGIMARKT*EVTPLA
Trigger: CGCCAACGGGGTCACCTCCAAGGTCTTCCTCGCCAT...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACATGGCGAGGAAGACCTaGGAGGTGACCCCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SANSTGATVLKGSTSSNYMARKT*EVTPLA
Trigger: CGCCAACGGGGTCACCTCCAAGGTCTTCCTCGCCAT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS TCA 90 bp TTTCCAGGCATGCAAAAGCCCCGCAGCCGACCTGTAGAGCACTGTTaGGGCAACGAACCACTTCAGCTTAGATCAGCTTCTGGAAAGTAT +
Preference number: 5 (lower is better)
Translates to: FPGMQKPRSRPVEHC*GNEPLQLRSASGKY
Trigger: ATACTTTCCAGAAGCTGATCTAAGCTGAAGTGGTTCGTTGCCTCAACAGTGCTCTACAGGTCGGCTGCGGGGCTTTTGCATGCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGCTTCAGGGTTCCGCTaGGCGATGCTGCACACATTC +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVASGFR*AMLHTF
Trigger: GAATGTGTGCAGCATCGCCAAGCGGAACCCTGAAGC...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp TCGCATTGGGGTCCTGGCTTAGTTGGGTTTGCAAAATGGACACAACACACAAACTTGGTGCGTCTCCTGTaGAAGTCAGCTCGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SHWGPGLVGFAKWTQHTNLVRLL*KSARGC
Trigger: ACACCCACGAGCTGACTTCAACAGGAGACGCACCAA...GTTTGTGTGTTGTGTCCATTTTGCAAACCCAACTAAGCCAGGACCCCAATGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGCAGTGTCCATAAGTTaGGGGACCTGGGGATGGGAC +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVAVSIS*GTWGWD
Trigger: GTCCCATCCCCAGGTCCCCAAACTTATGGACACTGC...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTTTGGTGCGTCTCCTGTaGAAGTCAGCTCGTGGGTGT +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVLVRLL*KSARGC
Trigger: ACACCCACGAGCTGACTTCAACAGGAGACGCACCAA...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTAGCTTCTGCGGCTCATaGGTGCGTCTCCTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVSFCGS*VRLLLK
Trigger: CTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCT...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACACCCTCTCTTCCTCTCTaGACATTGACCTTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTPSLPL*TLTFGG
Trigger: CCCACCAAAGGTCAATGTCAAGAGAGGAAGAGAGGG...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTCAAAGGCAGCAATGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVQRQQC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCACAAACATTGCTGCCTTTG...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAGAACTACTTGTCGCATaGGGGTCCTGGCTTAGTTGG +
Preference number: 5 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTELLVA*GSWLSW
Trigger: CCAACTAAGCCAGGACCCCAATGCGACAAGTAGTTC...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 90 bp TCCAAGAGGGTACGTGCCAGATTTCAGGCAATCAGGCTAGGCTTATaGAATGAAATACCCTCAGCAGAGCGTCCAGCTTCTTCGTTTAGT +
Preference number: 5 (lower is better)
Translates to: SKRVRARFQAIRLGL*NEIPSAERPASSFS
Trigger: ACTAAACGAAGAAGCTGGACGCTCTGCTGAGGGTATTTCATTGCATAAGCCTAGCCTGATTGCCTGAAATCTGGCACGTACCCTCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CAA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTCTCAGCAATCATCCTTaGGAAAGTGGAGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVLSNHP*ESGAPP
Trigger: CGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGAG...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCAGCTCGTGGGTGTGTTaGGGCACAGTGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: NKVSLSANSTGATVLKGSSSWVC*GTVVCL
Trigger: CAGACAGACCACTGTGCCCAAACACACCCACGAGCT...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATTCATGGGATGTGCGTTaGATGTGGGAGGGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDSWDVR*MWEGES
Trigger: GGACTCTCCCTCCCACATCAAACGCACATCCCATGA...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTCATGGGATGTGCGTTaGATGTGGGAGGGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: SANSTGATVLKGSTSSNYSWDVR*MWEGES
Trigger: GGACTCTCCCTCCCACATCAAACGCACATCCCATGA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATAAGGCTCAAAGTCTGGTaGGACAGCCAGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: MVTWILLVGMLPLQNVGIRLKVW*DSQAQA
Trigger: TGCTTGAGCCTGGCTGTCCAACCAGACTTTGAGCCT...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAGGCTCAAAGTCTGGTaGGACAGCCAGGCTCAAGCA +
Preference number: 5 (lower is better)
Translates to: SANSTGATVLKGSTSSNYRLKVW*DSQAQA
Trigger: TGCTTGAGCCTGGCTGTCCAACCAGACTTTGAGCCT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGCTCATAAGGGACTGTaGGGTTCAAGGACAGTGACC +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVAHKGL*GSRTVT
Trigger: GGTCACTGTCCTTGAACCCAACAGTCCCTTATGAGC...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTTTTCCCTCTCCTGGCTaGAGTGAAGATGTGGATCTG +
Preference number: 5 (lower is better)
Translates to: GATVLKGSTSSNYNGWRVFPSPG*SEDVDL
Trigger: CAGATCCACATCTTCACTCAAGCCAGGAGAGGGAAA...AACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTACCTGTAGAGCACTGTaGAGGCAACGAACCACTTCA +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVTCRAL*RQRTTS
Trigger: TGAAGTGGTTCGTTGCCTCAACAGTGCTCTACAGGT...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACAATGGCTGGAGAGTTACCTCAGCAATCATCCTTaGGAAAGTGGAGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: GNRSKGIHIFKLQWLESYLSNHP*ESGAPP
Trigger: CGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGAG...GTAACTCTCCAGCCATTGTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAGCTTCAGGGTTCCGCTaGGCGATGCTGCACACATTC +
Preference number: 5 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPASGFR*AMLHTF
Trigger: GAATGTGTGCAGCATCGCCAAGCGGAACCCTGAAGC...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAGTCACATGGATTTTGTaGGTGGGAATGCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTVTWIL*VGMLPL
Trigger: CAATGGCAGCATTCCCACCAACAAAATCCATGTGAC...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACAATGGTCACATGGATTTaGTTGGTGGGAATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTMVTWI*LVGMLP
Trigger: TGGCAGCATTCCCACCAACAAAATCCATGTGACCAT...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCCTGGGTCTGCTGCAATaGCTCTTGGTCCTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: NKVSLSANSTGATVLKGSLGLLQ*LLVLEQ
Trigger: CTGCTCAAGGACCAAGAGCAATTGCAGCAGACCCAG...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GAGGAAGTTGGTAAAAGAGGGTACTTTCTCCTGAGGAGAGGCAGAATGGTCACATACACTGGCAGTTTATaGCCATCAGGCATGAAGCAC +
Preference number: 5 (lower is better)
Translates to: EEVGKRGYFLLRRGRMVTYTGSL*PSGMKH
Trigger: GTGCTTCATGCCTGATGGCAATAAACTGCCAGTGTA...TGTGACCATTCTGCCTCTCCTCAGGAGAAAGTACCCTCTTTTACCAACTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CAA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCTGCAGTCGCTGCTTCTaGCACCTCTGGCTTTTGCAA +
Preference number: 5 (lower is better)
Translates to: NKVSLSANSTGATVLKGSCSRCF*HLWLLQ
Trigger: TTGCAAAAGCCAGAGGTGCAAGAAGCAGCGACTGCA...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp AATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATATACTCATGAACTACTaGTCGCATTGGGGTCCTGGC +
Preference number: 5 (lower is better)
Translates to: NGHMDFVGGNAAIAECWDILMNY*SHWGPG
Trigger: GCCAGGACCCCAATGCGACAAGTAGTTCATGAGTAT...ATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGAGCTTCTGCGGCTCATaGGTGCGTCTCCTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQSFCGS*VRLLLK
Trigger: CTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCT...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTGGGATAAATTGCTCTTGGTCCTaGAGCAGCACGTTACTGGTT +
Preference number: 5 (lower is better)
Translates to: MVTWILLVGMLPLQNVGINCSWS*SSTLLV
Trigger: AACCAGTAACGTGCTGCTCAAGGACCAAGAGCAATT...TATCCCAACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGAGCTCGTGGGTGTGTTaGGGCACAGTGGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLSSWVC*GTVVCL
Trigger: CAGACAGACCACTGTGCCCAAACACACCCACGAGCT...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp GGACGAGTAAAGAACTGCCACTTCCTAATGTATAGTAGGCCTTATCACACTGTAGTGGGAATGCTGCCATaGCAGAATGTTGGGATATTG +
Preference number: 5 (lower is better)
Translates to: GRVKNCHFLMYSRPYHTVVGMLP*QNVGIL
Trigger: CAATATCCCAACATTCTGCAATGGCAGCATTCCCAC...TACAGTGTGATAAGGCCTACTATACATTAGGAAGTGGCAGTTCTTTACTCGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GGCAGAATGGTCACATGGATTTTGTTGGTGGGAATGCTGCCATTGCAGAATGTTAGTTACATGAATGTTTaGTGTTTGGGGGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: GRMVTWILLVGMLPLQNVSYMNV*CLGVVS
Trigger: TGAGACCACCCCCAAACACAAAACATTCATGTAACT...AACATTCTGCAATGGCAGCATTCCCACCAACAAAATCCATGTGACCATTCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGACCTGTAGAGCACTGTaGAGGCAACGAACCACTTCA +
Preference number: 5 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQTCRAL*RQRTTS
Trigger: TGAAGTGGTTCGTTGCCTCAACAGTGCTCTACAGGT...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAATGGTCACATGGATTTaGTTGGTGGGAATGCTGCCA +
Preference number: 5 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPMVTWI*LVGMLP
Trigger: TGGCAGCATTCCCACCAACAAAATCCATGTGACCAT...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp AATTTGCTAGGAATACTCATGAACTACTTGTCGCATTGGGGTCCTGGCTTAGTTCCAGGCTCAAGCAATTaGGTAAATGTGTCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NLLGILMNYLSHWGPGLVPGSSN*VNVSER
Trigger: TCTTTCCGACACATTTACCAAATTGCTTGAGCCTGG...AACTAAGCCAGGACCCCAATGCGACAAGTAGTTCATGAGTATTCCTAGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp AATAAAGTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCCCAGGCTCAAGCAATTaGGTAAATGTGTCGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NKVSLSANSTGATVLKGSPGSSN*VNVSER
Trigger: TCTTTCCGACACATTTACCAAATTGCTTGAGCCTGG...GGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAACTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACTCCTGGAATTTCCAGTaGGATGTGACAGAGATCTTT +
Preference number: 5 (lower is better)
Translates to: SANSTGATVLKGSTSSNYSWNFQ*DVTEIF
Trigger: AAAGATCTCTGTCACATCCAACTGGAAATTCCAGGA...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp TCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTTCAAATTACATAGGGATGCTCTTTTaGGTTCCTGGAATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SANSTGATVLKGSTSSNYIGMLF*VPGISS
Trigger: ACTGGAAATTCCAGGAACCAAAAAGAGCATCCCTAT...GTAATTTGAAGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp GTTTCCTTATCAGCTAACTCTACTGGGGCAACCGTTCTAAAGGGATCCACATCTCCTGAGAAACTACTGTaGTTCATAGATAGGTTAGTC +
Preference number: 5 (lower is better)
Translates to: VSLSANSTGATVLKGSTSPEKLL*FIDRLV
Trigger: GACTAACCTATCTATGAACAACAGTAGTTTCTCAGG...AGATGTGGATCCCTTTAGAACGGTTGCCCCAGTAGAGTTAGCTGATAAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGTTGGAGGTGACCCCGTaGGCGATGCATTTTAAGCTC +
Preference number: 5 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLLEVTP*AMHFKL
Trigger: GAGCTTAAAATGCATCGCCAACGGGGTCACCTCCAA...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGGTCACATGGATTTTGTaGGTGGGAATGCTGCCATTG +
Preference number: 5 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQVTWIL*VGMLPL
Trigger: CAATGGCAGCATTCCCACCAACAAAATCCATGTGAC...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATCCACATCTTCAAATTACAATGGCTGGAGAGTTACATGAATGTTTTGTGTTTGCTGCTGCAATTGCTCTaGGTCCTTGAGCAGCACGTT +
Preference number: 5 (lower is better)
Translates to: IHIFKLQWLESYMNVLCLLLQLL*VLEQHV
Trigger: AACGTGCTGCTCAAGGACCAAGAGCAATTGCAGCAG...CAAACACAAAACATTCATGTAACTCTCCAGCCATTGTAATTTGAAGATGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS-3UTR CAA 90 bp AATGTGACATTCATATTCGTCCATGGCCAGCACAGATTCATAACACGAATTCCAAGTTACATGAATGTTTaGTGTTTGGGGGTGGTCTCA +
Preference number: 5 (lower is better)
Translates to: NVTFIFVHGQHRFITRIPSYMNV*CLGVVS
Trigger: TGAGACCACCCCCAAACACAAAACATTCATGTAACT...TGGAATTCGTGTTATGAATCTGTGCTGGCCATGGACGAATATGAATGTCACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS-3UTR CAA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGCACTGCCTAAGGCTATaGGATTACACTGGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQHCLRL*DYTGSL
Trigger: TAAACTGCCAGTGTAATCCAATAGCCTTAGGCAGTG...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS-3UTR CAA 90 bp ATTAGAGATCAAGAATTCAAATGTGACATTCATATTCGTCCATGGCCAGCACAGAGTATAGAGAGCGCTTaGAAGCATGCCAACATTCAA +
Preference number: 5 (lower is better)
Translates to: IRDQEFKCDIHIRPWPAQSIESA*KHANIQ
Trigger: TTGAATGTTGGCATGCTTCAAAGCGCTCTCTATACT...CTGTGCTGGCCATGGACGAATATGAATGTCACATTTGAATTCTTGATCTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS GCA 72 bp CGCCGCTGCTGCTGCTGCTGCCACCGCCGCTGCTGCTaGTGCTGCTGCAGTCGCTGCTTCTTGCACCTCTGG +
Preference number: 6 (lower is better)
Translates to: RRCCCCCHRRCC*CCCSRCFLHLW
Trigger: CCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCGGCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 72 bp TGCCGCCGCTGCTGCTGCTGCTGCCACCGCCGCTGCTaGTGCTGCTGCTGCAGTCGCTGCTTCTTGCACCTC +
Preference number: 6 (lower is better)
Translates to: CRRCCCCCHRRC*CCCCSRCFLHL
Trigger: GAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCGGCGGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 72 bp CGCTGCTGCTGCTGCTGCCACCGCCGCTGCTGCTGCTaGTGCTGCAGTCGCTGCTTCTTGCACCTCTGGCTT +
Preference number: 6 (lower is better)
Translates to: RCCCCCHRRCCC*CCSRCFLHLWL
Trigger: AAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCAGCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 72 bp TGCTGCTGCTGCTGCCACCGCCGCTGCTGCTGCTGCTaGTGCAGTCGCTGCTTCTTGCACCTCTGGCTTTTG +
Preference number: 6 (lower is better)
Translates to: CCCCCHRRCCCC*CSRCFLHLWLL
Trigger: CAAAAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS GCA 72 bp TGCTGCTGCTGCCACCGCCGCTGCTGCTGCTGCTGCTaGAGTCGCTGCTTCTTGCACCTCTGGCTTTTGCAA +
Preference number: 6 (lower is better)
Translates to: CCCCHRRCCCCC*SRCFLHLWLLQ
Trigger: TTGCAAAAGCCAGAGGTGCAAGAAGCAGCGACTGCAGCAGCAGCAGCAGCAGCGGCGGTGGCAGCAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS TCA 72 bp TGTGGGAGGGAGAGTCCTCCTCACCTCGGAGGTTCCTaGGGAGGACTTTCAGCTTCTGCGGCTCATTGGTGC +
Preference number: 6 (lower is better)
Translates to: CGRESPPHLGGS*GGLSASAAHWC
Trigger: GCACCAATGAGCCGCAGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTGAGGAGGACTCTCCCTCCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 90 bp CGGCTCATTGGTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGTGTTaGGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: RLIGASPVEVSSWVC*GTVVCLQDVEEAGH
Trigger: ATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp CTTCAGCTGAGTTTTGAGCCGCCACTCGGGATTTCCTaGGGCTCACAGAGTCATTCTGCTCCGCCTCATGGG +
Preference number: 6 (lower is better)
Translates to: LQLSFEPPLGIS*GSQSHSAPPHG
Trigger: CCCATGAGGCGGAGCAGAATGACTCTGTGAGCCCCAGGAAATCCCGAGTGGCGGCTCAAAACTCAGCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS CAA 72 bp CCTCTCCCTGGTTATGCACTCTCATGGGATGTGCGTTaGATGTGGGAGGGAGAGTCCTCCTCACCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: PLPGYALSWDVR*MWEGESSSPRR
Trigger: CCTCCGAGGTGAGGAGGACTCTCCCTCCCACATCAAACGCACATCCCATGAGAGTGCATAACCAGGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 90 bp CTGAGGAGGACTTTCAGCTTCTGCGGCTCATTGGTGCGTCTCCTGTaGAAGTCAGCTCGTGGGTGTGTTTGGGCACAGTGGTCTGTCTGC +
Preference number: 6 (lower is better)
Translates to: LRRTFSFCGSLVRLL*KSARGCVWAQWSVC
Trigger: GCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 90 bp TCACCTCGGAGGTTCCTGAGGAGGACTTTCAGCTTCTGCGGCTCATaGGTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGTGTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: SPRRFLRRTFSFCGS*VRLLLKSARGCVWA
Trigger: TGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS TCA 72 bp TGTTGGAGAAGTGATTGGGCAGCTGGACGACCTCAGTaGTGGCTTCAGGGTTCCGCTTGGCGATGCTGCACA +
Preference number: 6 (lower is better)
Translates to: CWRSDWAAGRPQ*WLQGSAWRCCT
Trigger: TGTGCAGCATCGCCAAGCGGAACCCTGAAGCCATCACTGAGGTCGTCCAGCTGCCCAATCACTTCTCCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp CTGTTGAAGTCAGCTCGTGGGTGTGTTTGGGCACAGTaGTCTGTCTGCAGGATGTGGAAGAGGCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: LLKSARGCVWAQ*SVCRMWKRLAM
Trigger: CATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp GTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGTGTTTaGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: VRLLLKSARGCV*AQWSVCRMWKR
Trigger: CCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp CGGCTCATTGGTGCGTCTCCTGTTGAAGTCAGCTCGTaGGTGTGTTTGGGCACAGTGGTCTGTCTGCAGGAT +
Preference number: 6 (lower is better)
Translates to: RLIGASPVEVSS*VCLGTVVCLQD
Trigger: ATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp CCTGGTTATGCACTCTCATGGGATGTGCGTTTGATGTaGGAGGGAGAGTCCTCCTCACCTCGGAGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: PGYALSWDVRLM*EGESSSPRRFL
Trigger: CAGGAACCTCCGAGGTGAGGAGGACTCTCCCTCCCACATCAAACGCACATCCCATGAGAGTGCATAACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 72 bp GGTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGTGTTaGGGCACAGTGGTCTGTCTGCAGGATGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: GASPVEVSSWVC*GTVVCLQDVEE
Trigger: CTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS TCA 72 bp CTTTCAGCTTCTGCGGCTCATTGGTGCGTCTCCTGTTaGAGTCAGCTCGTGGGTGTGTTTGGGCACAGTGGT +
Preference number: 6 (lower is better)
Translates to: LSASAAHWCVSC*SQLVGVFGHSG
Trigger: ACCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS GCA 72 bp CAGGGTTCCGCTTGGCGATGCTGCACACATTCAGCTTaGTGTAGCACTCTTCCTGCACCTCAGCAATCATCC +
Preference number: 6 (lower is better)
Translates to: QGSAWRCCTHSA*CSTLPAPQQSS
Trigger: GGATGATTGCTGAGGTGCAGGAAGAGTGCTACAGCAAGCTGAATGTGTGCAGCATCGCCAAGCGGAACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS GCA 72 bp TCACCTCGGAGGTTCCTGAGGAGGACTTTCAGCTTCTaGGGCTCATTGGTGCGTCTCCTGTTGAAGTCAGCT +
Preference number: 6 (lower is better)
Translates to: SPRRFLRRTFSF*GSLVRLLLKSA
Trigger: AGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCTCCTCAGGAACCTCCGAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp GGGTGTGTTTGGGCACAGTGGTCTGTCTGCAGGATGTaGAAGAGGCTGGCCATGTTAGGCCCAATTTTCTCC +
Preference number: 6 (lower is better)
Translates to: GCVWAQWSVCRM*KRLAMLGPIFS
Trigger: GGAGAAAATTGGGCCTAACATGGCCAGCCTCTTCCACATCCTGCAGACAGACCACTGTGCCCAAACACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 72 bp TGGAAAGTGGAGCACCTCCGAATGGCGAGGAAGACCTaGGAGGTGACCCCGTTGGCGATGCATTTTAAGCTC +
Preference number: 6 (lower is better)
Translates to: WKVEHLRMARKT*EVTPLAMHFKL
Trigger: GAGCTTAAAATGCATCGCCAACGGGGTCACCTCCAAGGTCTTCCTCGCCATTCGGAGGTGCTCCACTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 72 bp ACTTTCAGCTTCTGCGGCTCATTGGTGCGTCTCCTGTaGAAGTCAGCTCGTGGGTGTGTTTGGGCACAGTGG +
Preference number: 6 (lower is better)
Translates to: TFSFCGSLVRLL*KSARGCVWAQW
Trigger: CCACTGTGCCCAAACACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 72 bp AGGTTCCTGAGGAGGACTTTCAGCTTCTGCGGCTCATaGGTGCGTCTCCTGTTGAAGTCAGCTCGTGGGTGT +
Preference number: 6 (lower is better)
Translates to: RFLRRTFSFCGS*VRLLLKSARGC
Trigger: ACACCCACGAGCTGACTTCAACAGGAGACGCACCAATGAGCCGCAGAAGCTGAAAGTCCTCCTCAGGAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CCA 72 bp ACTCTTCCTGCACCTCAGCAATCATCCTTTGGAAAGTaGAGCACCTCCGAATGGCGAGGAAGACCTTGGAGG +
Preference number: 6 (lower is better)
Translates to: TLPAPQQSSFGK*STSEWRGRPWR
Trigger: CCTCCAAGGTCTTCCTCGCCATTCGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGAGGTGCAGGAAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 72 bp GCTGTAGCACTCTTCCTGCACCTCAGCAATCATCCTTaGGAAAGTGGAGCACCTCCGAATGGCGAGGAAGAC +
Preference number: 6 (lower is better)
Translates to: AVALFLHLSNHP*ESGAPPNGEED
Trigger: GTCTTCCTCGCCATTCGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGAGGTGCAGGAAGAGTGCTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS TCA 72 bp AGTCATTCTGCTCCGCCTCATGGGTTGCAGAAGCACTaGTCACCAGCACCAGAAGCACTGCTGAGTTTTGGA +
Preference number: 6 (lower is better)
Translates to: SHSAPPHGLQKH*SPAPEALLSFG
Trigger: TCCAAAACTCAGCAGTGCTTCTGGTGCTGGTGATCAGTGCTTCTGCAACCCATGAGGCGGAGCAGAATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290271.7
CDS TCA 72 bp ATGCAAAAGCCCCGCAGCCGACCTGTAGAGCACTGTTaGGGCAACGAACCACTTCAGCTTAGATCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: MQKPRSRPVEHC*GNEPLQLRSAS
Trigger: AGAAGCTGATCTAAGCTGAAGTGGTTCGTTGCCTCAACAGTGCTCTACAGGTCGGCTGCGGGGCTTTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS CAA 72 bp CTCCGAATGGCGAGGAAGACCTTGGAGGTGACCCCGTaGGCGATGCATTTTAAGCTCTCTTTGACGAATGCT +
Preference number: 6 (lower is better)
Translates to: LRMARKTLEVTP*AMHFKLSLTNA
Trigger: AGCATTCGTCAAAGAGAGCTTAAAATGCATCGCCAACGGGGTCACCTCCAAGGTCTTCCTCGCCATTCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 90 bp ATCATCCTTTGGAAAGTGGAGCACCTCCGAATGGCGAGGAAGACCTaGGAGGTGACCCCGTTGGCGATGCATTTTAAGCTCTCTTTGACG +
Preference number: 6 (lower is better)
Translates to: IILWKVEHLRMARKT*EVTPLAMHFKLSLT
Trigger: CGTCAAAGAGAGCTTAAAATGCATCGCCAACGGGGTCACCTCCAAGGTCTTCCTCGCCATTCGGAGGTGCTCCACTTTCCAAAGGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS CAA 90 bp ATTCAGCTTGCTGTAGCACTCTTCCTGCACCTCAGCAATCATCCTTaGGAAAGTGGAGCACCTCCGAATGGCGAGGAAGACCTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: IQLAVALFLHLSNHP*ESGAPPNGEEDLGG
Trigger: ACCTCCAAGGTCTTCCTCGCCATTCGGAGGTGCTCCACTTTCCAAAGGATGATTGCTGAGGTGCAGGAAGAGTGCTACAGCAAGCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290271.7
ENST00000524323.1
CDS GCA 72 bp GTACGTGCCAGATTTCAGGCAATCAGGCTAGGCTTATaGAATGAAATACCCTCAGCAGAGCGTCCAGCTTCT +
Preference number: 6 (lower is better)
Translates to: VRARFQAIRLGL*NEIPSAERPAS
Trigger: AGAAGCTGGACGCTCTGCTGAGGGTATTTCATTGCATAAGCCTAGCCTGATTGCCTGAAATCTGGCACGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS TCA 72 bp TGCCAGATTTCAGGCAATCAGGCTAGGCTTATGCAATaGAATACCCTCAGCAGAGCGTCCAGCTTCTTCGTT +
Preference number: 6 (lower is better)
Translates to: CQISGNQARLMQ*NTLSRASSFFV
Trigger: AACGAAGAAGCTGGACGCTCTGCTGAGGGTATTTCATTGCATAAGCCTAGCCTGATTGCCTGAAATCTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524323.1
CDS CAA 72 bp AGCTTAGATCAGCTTCTGGAAAGTATAGAGAGCGCTTaGAAGCATGCCAACATTCAAGCCTTTCCTCCCCTC +
Preference number: 6 (lower is better)
Translates to: SLDQLLESIESA*KHANIQAFPPL
Trigger: GAGGGGAGGAAAGGCTTGAATGTTGGCATGCTTCAAAGCGCTCTCTATACTTTCCAGAAGCTGATCTAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524323.1