Pregenerated sensors for STBD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000118804Ensembl transcript IDs: ENST00000237642.7
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGCACATAACAACGCCTaGCAGATGAAAATCAAACAA | + |
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Preference number: 2 (lower is better) Translates to: AYAQPHSLSLSLWAAPATAHNNA*QMKIKQ Trigger: TTGTTTGATTTTCATCTGCCAGGCGTTGTTATGTGC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| 3UTR-3UTR CAA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTTCAGCCTCTTCCACATaGTTCTACAGCTTCTCCATT | + |
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Preference number: 3 (lower is better) Translates to: AYAQPHSLSLSLWAAPATSASST*FYSFSI Trigger: AATGGAGAAGCTGTAGAACAATGTGGAAGAGGCTGA...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTACCAGACGGCGCCCATaGCTGAGAGGCCGCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATTRRRP*LRGRGR Trigger: GCGGCCGCGGCCTCTCAGCCATGGGCGCCGTCTGGT...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTCCGCTGCTGCCACTCTaGTGGCCTCCCGGAATCGCA | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATPLLPL*WPPGIA Trigger: TGCGATTCCGGGAGGCCATCAGAGTGGCAGCAGCGG...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGGCTCAGTCCGCTGCTaGCACTCTGATGGCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATGSVRC*HSDGLP Trigger: CGGGAGGCCATCAGAGTGGCAGCAGCGGACTGAGCC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGGGTGCATCCCTCCCTaGAGTCGGGCTGTGCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATGCIPP*SRAVPV Trigger: TACAGGCACAGCCCGACTGCAGGGAGGGATGCACCC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTTCTGGCCAGATGCGGTaGGGGAGGGGAGAAGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATSGQMR*GRGEEV Trigger: CACTTCTTCTCCCCTCCCCCACCGCATCTGGCCAGA...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGTAGGACAGTCCATCTaGCCAGATGCGGTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATVGQSI*PDAVGE Trigger: CTCCCCCACCGCATCTGGCCAGATGGACTGTCCTAC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGCTCCCATGGGTAAATaGTGGGTGCATCCCTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATAPMGK*WVHPSL Trigger: CAGGGAGGGATGCACCCATCATTTACCCATGGGAGC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTCCTGCAGTCGGGCTGTaGCTGTACTTCACAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATPAVGL*LYFTVL Trigger: GAGGACTGTGAAGTACAGGCACAGCCCGACTGCAGG...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAGACGGCGCCCATGGCTaGGAGGCCGCGGCCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSDGAHG*EAAAAG Trigger: TCCTGCGGCCGCGGCCTCTCAGCCATGGGCGCCGTC...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTTGGTCAACCCGGTCCTaGCTGTTCAAATCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATWSTRS*LFKSER Trigger: CCTCTCTGATTTGAACAGTCAGGACCGGGTTGACCA...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTCTGACACTAACTTGCTaGGACCCTGCAGGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATLTLTC*DPAGIT Trigger: AGTGATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAG...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGGAGAGGGAAGAGGGTaGCAGATGGAAACGATTGCT | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATGEGRG*QMETIA Trigger: AGCAATCGTTTCCATCTGTCACCCTCTTCCCTCTCC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTACCTCACTCAGCCTATaGCCAACCCCACTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATTSLSL*PTPLTF Trigger: GAAAGTGAGTGGGGTTGGGCATAGGCTGAGTGAGGT...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGCACATCAGTGCTTGTaGCATAATGGACCTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATAHQCL*HNGPGT Trigger: GGTTCCAGGTCCATTATGTCACAAGCACTGATGTGC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTCACTTGCTGACCTCTTaGTTCCACCAAAGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATHLLTS*FHQSAS Trigger: AGAAGCACTTTGGTGGAAGCAAGAGGTCAGCAAGTG...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTCTCCACCACTGTATCTaGAGGCAGGAAAATGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATLHHCI*RQENGM Trigger: CATTCCATTTTCCTGCCTGCAGATACAGTGGTGGAG...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTTTCTTGAAGATGCTCTaGTTTGGTGACCAGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATFLKML*FGDQLL Trigger: CAGGAGCTGGTCACCAAACCAGAGCATCTTCAAGAA...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTACAGATGGAAACGATTaGTGTAGGACAGTCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATTDGND*CRTVHL Trigger: CAGATGGACTGTCCTACAGCAATCGTTTCCATCTGT...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTTTGCTTCCACCAAAGTaGTTCTTCCATTGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATLLPPK*FFHCPF Trigger: GAATGGACAATGGAAGAAGCACTTTGGTGGAAGCAA...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTAAGTCTGTCAATCAGTaGCACAGGGAAAAGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATKSVNQ*HREKKF Trigger: GAACTTCTTTTCCCTGTGGCACTGATTGACAGACTT...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGACTTCCATGATGATTaGTTCTCATTAGGCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATDFHDD*FSLGPL Trigger: CAAAGGGCCTAATGAGAACCAATCATCATGGAAGTC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCACAGCCAAACGAAAAGTaGTCCGGCCAGACCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSQPNEK*SGQTPS Trigger: GGAGGGGGTCTGGCCGGAGCACTTTTCGTTTGGCTG...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTATGGTCTCCAGTTACTaGAATGAATTGCACATCAGT | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATMVSSY*NELHIS Trigger: ACTGATGTGCAATTCATTGCAGTAACTGGAGACCAT...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGAAGTCAGCTATGTTTaGGTGAGGCTTATTTTACTA | + |
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Preference number: 4 (lower is better) Translates to: AYAQPHSLSLSLWAAPATEVSYV*VRLILL Trigger: TAGTAAAATAAGCCTCACTCAAACATAGCTGACTTC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCACTAAAGGCTCAAGCTTaGACCCTGGGCAGCTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSLKAQA*TLGSWL Trigger: TAACCAGCTGCCCAGGGTTCAAGCTTGAGCCTTTAG...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCATGTCACAGACTTCCCTaGAAGGATTCTGCAATCTCC | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSCHRLP*KDSAIS Trigger: GGAGATTGCAGAATCCTTCCAGGGAAGTCTGTGACA...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR TCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAATTCTGCAATCTCCATaGTGCTGCTTGCAGTTTACC | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSILQSP*CCLQFT Trigger: GGTAAACTGCAAGCAGCATCATGGAGATTGCAGAAT...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCACTCCATGATGCTGCTTaGAGTTTACCAAGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSLHDAA*SLPRSL Trigger: CAAAGACCTTGGTAAACTGCAAGCAGCATCATGGAG...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR GCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAGTTACTGCAATGAATTaGACATCAGTGCTTGTGACA | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSVTAMN*TSVLVT Trigger: TGTCACAAGCACTGATGTGCAATTCATTGCAGTAAC...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CCA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAGCACATAACAACGCCTaGCAGATGAAAATCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: WISTSLSISATGKRSSHSAHNNA*QMKIKQ Trigger: TTGTTTGATTTTCATCTGCCAGGCGTTGTTATGTGC...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGAACCTGACACTAACTaGCTGAGACCCTGCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: AYAQPHSLSLSLWAAPATEPDTN*LRPCRH Trigger: ATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAGGTTC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTCATTTTCCCATGCACTaGCTGACCTCTTGCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: AYAQPHSLSLSLWAAPATHFPMH*LTSCFH Trigger: GTGGAAGCAAGAGGTCAGCAAGTGCATGGGAAAATG...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTAGTTACTGCAATGAATaGCACATCAGTGCTTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: AYAQPHSLSLSLWAAPATSYCNE*HISACD Trigger: GTCACAAGCACTGATGTGCAATTCATTGCAGTAACT...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS TCA 90 bp | GAGTGCCTAGGCACCATTTCCCACTCCTCGTGGTCAACCCGGTCCTaGCTGTTCAAATCAGAGAGGCTCATTTCTTCTTTAGCTCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: ECLGTISHSSWSTRS*LFKSERLISSLALF Trigger: GAACAGAGCTAAAGAAGAAATGAGCCTCTCTGATTTGAACAGTCAGGACCGGGTTGACCACGAGGAGTGGGAAATGGTGCCTAGGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS TCA 90 bp | CCTGCAGGCATCACTGCTACCCTTTCCATTTTCCCATGCACTTGCTaGCCTCTTGCTTCCACCAAAGTGCTTCTTCCATTGTCCATTCCC | + |
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Preference number: 5 (lower is better) Translates to: PAGITATLSIFPCTC*PLASTKVLLPLSIP Trigger: GGGAATGGACAATGGAAGAAGCACTTTGGTGGAAGCAAGAGGTCAGCAAGTGCATGGGAAAATGGAAAGGGTAGCAGTGATGCCTGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | GCCTATGCCCAACCCCACTCACTTTCCCTTTCCTTATGGGCTGCCCCCGCAACTGGAAGTCAGCTATGTTaGAGTGAGGCTTATTTTACT | + |
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Preference number: 5 (lower is better) Translates to: AYAQPHSLSLSLWAAPATGSQLC*SEAYFT Trigger: AGTAAAATAAGCCTCACTCAAACATAGCTGACTTCC...AGTTGCGGGGGCAGCCCATAAGGAAAGGGAAAGTGAGTGGGGTTGGGCATAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAGCACTTGCTGACCTCTaGCTTCCACCAAAGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: WISTSLSISATGKRSSHSALADL*LPPKCF Trigger: GAAGCACTTTGGTGGAAGCAAGAGGTCAGCAAGTGC...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAAAAGTGCTTCTTCCATaGTCCATTCCCTGGTTTAGG | + |
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Preference number: 5 (lower is better) Translates to: WISTSLSISATGKRSSHSKVLLP*SIPWFR Trigger: CCTAAACCAGGGAATGGACAATGGAAGAAGCACTTT...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCATCAGCCTCTTCCACATaGTTCTACAGCTTCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: WISTSLSISATGKRSSHSSASST*FYSFSI Trigger: AATGGAGAAGCTGTAGAACAATGTGGAAGAGGCTGA...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCACAAGTCTGTCAATCAGTGCCACAGGGAAAAGAAGTTCACATTCAAGCTTCTCCATTACTTaGCAAACTGAATCAGTGAAT | + |
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Preference number: 5 (lower is better) Translates to: WISTSLSISATGKRSSHSSFSIT*QTESVN Trigger: ATTCACTGATTCAGTTTGCAAAGTAATGGAGAAGCT...TGAATGTGAACTTCTTTTCCCTGTGGCACTGATTGACAGACTTGTGCTGATCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS CCA 72 bp | CCCCTCCAACCAGCAGGGCGGACCAGACGGCGCCCATaGCTGAGAGGCCGCGGCCGCAGGAGACTACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PLQPAGRTRRRP*LRGRGRRRLQG Trigger: TCCCTGTAGTCTCCTGCGGCCGCGGCCTCTCAGCCATGGGCGCCGTCTGGTCCGCCCTGCTGGTTGGAGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS CAA 72 bp | GCTTGTGACATAATGGACCTGGAACCTGACACTAACTaGCTGAGACCCTGCAGGCATCACTGCTACCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ACDIMDLEPDTN*LRPCRHHCYPF Trigger: GAAAGGGTAGCAGTGATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAGGTTCCAGGTCCATTATGTCACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS CAA 90 bp | CACATCAGTGCTTGTGACATAATGGACCTGGAACCTGACACTAACTaGCTGAGACCCTGCAGGCATCACTGCTACCCTTTCCATTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HISACDIMDLEPDTN*LRPCRHHCYPFHFP Trigger: GGGAAAATGGAAAGGGTAGCAGTGATGCCTGCAGGGTCTCAGCAAGTTAGTGTCAGGTTCCAGGTCCATTATGTCACAAGCACTGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS TCA 72 bp | GGCACCATTTCCCACTCCTCGTGGTCAACCCGGTCCTaGCTGTTCAAATCAGAGAGGCTCATTTCTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: GTISHSSWSTRS*LFKSERLISSL Trigger: TAAAGAAGAAATGAGCCTCTCTGATTTGAACAGTCAGGACCGGGTTGACCACGAGGAGTGGGAAATGGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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| CDS GCA 72 bp | TACCCTTTCCATTTTCCCATGCACTTGCTGACCTCTTaGTTCCACCAAAGTGCTTCTTCCATTGTCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: YPFHFPMHLLTS*FHQSASSIVHS Trigger: GGAATGGACAATGGAAGAAGCACTTTGGTGGAAGCAAGAGGTCAGCAAGTGCATGGGAAAATGGAAAGGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000237642.7 |
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