RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAU2 (Homo sapiens)

Ensembl gene IDs: ENSG00000040341

Ensembl transcript IDs: ENST00000355780.9, ENST00000517542.5, ENST00000518502.5, ENST00000518767.5, ENST00000518981.5, ENST00000519818.5, ENST00000519961.5, ENST00000520872.5, ENST00000520945.5, ENST00000521210.5, ENST00000521293.5, ENST00000521419.5, ENST00000521447.5, ENST00000521451.5, ENST00000521727.5, ENST00000521736.5, ENST00000521845.5, ENST00000522061.5, ENST00000522509.5, ENST00000522695.5, ENST00000522818.1, ENST00000523533.5, ENST00000523558.5, ENST00000524104.5, ENST00000524113.5, ENST00000524191.5, ENST00000524300.6

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTaGCTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCA +
Preference number: 1 (lower is better)
Translates to: TASAPRWIPTCWPGA*LAGSNSNRFFPSPS
Trigger: TGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR CCA 90 bp CATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGGCTaGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTA +
Preference number: 1 (lower is better)
Translates to: HLLHAGFQHAGPERG*LEATPTGFSLPRHV
Trigger: TACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR CCA 90 bp TGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGGCTGGCTaGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATT +
Preference number: 1 (lower is better)
Translates to: CSTLDSNMLARSVAG*KQLQQVFPFPVMYI
Trigger: AATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR GCA 90 bp ACCAACCACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATaGTGGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAACAGGTTT +
Preference number: 1 (lower is better)
Translates to: TNHIFTASAPRWIPT*WPGAWLAGSNSNRF
Trigger: AAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGTGGTTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR TCA 90 bp GTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGC +
Preference number: 1 (lower is better)
Translates to: VLVIHFPEHRHPHAC*QVYKDAVAAAGSGS
Trigger: GCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
3UTR CCA 90 bp AACCACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTaGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAACAGGTTTTTC +
Preference number: 1 (lower is better)
Translates to: NHIFTASAPRWIPTC*PGAWLAGSNSNRFF
Trigger: GAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGTGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR GCA 90 bp TATGCATGTGGCCAGACTAAGTCATTTCCCGGAGATTCTGCTCACTaGTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATTTTACA +
Preference number: 1 (lower is better)
Translates to: YACGQTKSFPGDSAH*LAAGSGPSMTEYFT
Trigger: TGTAAAATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCCGGGAAATGACTTAGTCTGGCCACATGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR TCA 90 bp GGCTTTAAAACTTTTAACCACAAAGAACCTTCTGCTGCGACATTATaGAGATGGGCTATGCATGTGGCCAGACTAAGTCATTTCCCGGAG +
Preference number: 1 (lower is better)
Translates to: GFKTFNHKEPSAATL*RWAMHVARLSHFPE
Trigger: CTCCGGGAAATGACTTAGTCTGGCCACATGCATAGCCCATCTTCATAATGTCGCAGCAGAAGGTTCTTTGTGGTTAAAAGTTTTAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR GCA 90 bp AATATAGCTGTCACATACAATGGCTCTAGTAGGCTTAAATCAAATTaGAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTCAA +
Preference number: 1 (lower is better)
Translates to: NIAVTYNGSSRLKSN*NGQGKPKKGLHNIQ
Trigger: TTGAATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAGCCTACTAGAGCCATTGTATGTGACAGCTATATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
3UTR TCA 90 bp ATATGCAAAGGTGCACTGACAAAAACAAGAAATAAGATGACAATCTaGCTGACAACAATGATTTGGAAAGTAACTAAAAGCACACTTGGG +
Preference number: 1 (lower is better)
Translates to: ICKGALTKTRNKMTI*LTTMIWKVTKSTLG
Trigger: CCCAAGTGTGCTTTTAGTTACTTTCCAAATCATTGTTGTCAGTCAGATTGTCATCTTATTTCTTGTTTTTGTCAGTGCACCTTTGCATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524104.5
3UTR TCA 90 bp GCCCCAAATTCAAACAATAATATCGGTTTTCAAGATAATAGCAATTaGAAAGCATCAAAGAAAGGAGCAAGCAATATGCAAAGGTGCACT +
Preference number: 1 (lower is better)
Translates to: APNSNNNIGFQDNSN*KASKKGASNMQRCT
Trigger: AGTGCACCTTTGCATATTGCTTGCTCCTTTCTTTGATGCTTTTCAATTGCTATTATCTTGAAAACCGATATTATTGTTTGAATTTGGGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524104.5
3UTR-3UTR TCA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTCACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCG +
Preference number: 2 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAIHPHAC*QVYKDA
Trigger: CGCATCCTTATAAACCTGTCAGCACGCATGAGGGTG...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR TCA 90 bp CTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTCCGTTCCTGGAGTATGTTaGAACTACTTGCTCTTAACA +
Preference number: 2 (lower is better)
Translates to: LDANREWLQHTDGGGRDSVPGVC*NYLLLT
Trigger: TGTTAAGAGCAAGTAGTTTCAACATACTCCAGGAAC...GGAATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp AACATGCTGGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTCCACAGCACATCATTaGTTCATTTTCGAATTGTCA +
Preference number: 2 (lower is better)
Translates to: NMLARSVAGWKQLQQVFPSTAHH*FIFELS
Trigger: TGACAATTCGAAAATGAACCAATGATGTGCTGTGGA...GGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR TCA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGAGAGAGAATATAACTaGACACAAGCACCACGACAA +
Preference number: 2 (lower is better)
Translates to: TFLLHLLHAGFQHAGPEREREYN*TQAPRQ
Trigger: TTGTCGTGGTGCTTGTGTTCAGTTATATTCTCTCTC...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR TCA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTTTGTCAAGCAGTATTTaGAATGAGAGAGAGAGAGAA +
Preference number: 2 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAILSSSI*NERERE
Trigger: TTCTCTCTCTCTCTCATTTCAAATACTGCTTGACAA...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTCTTGCTAAGAGTATATaGAGCTCAAAACCCACAATT +
Preference number: 2 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAILAKSI*SSKPTI
Trigger: AATTGTGGGTTTTGAGCTCCATATACTCTTAGCAAG...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCCTTGCTAAGAGTATATaGAGCTCAAAACCCACAATT +
Preference number: 2 (lower is better)
Translates to: NTLDANREWLQHTDGGGRLAKSI*SSKPTI
Trigger: AATTGTGGGTTTTGAGCTCCATATACTCTTAGCAAG...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTTCCACAGCACATCATTaGTTCATTTTCGAATTGTCA +
Preference number: 2 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERSTAHH*FIFELS
Trigger: TGACAATTCGAAAATGAACCAATGATGTGCTGTGGA...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTGATGCAAACCGTGAGTaGCTACAACACACGGATGGG +
Preference number: 2 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFDANRE*LQHTDG
Trigger: CCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATC...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATTTTATAAGGATGCGGTaGCAGCCGCGGGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHFIRMR*QPRVLG
Trigger: TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAA...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGATTTATAAGGATGCGGTaGCAGCCGCGGGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMRFIRMR*QPRVLG
Trigger: TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAA...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR TCA 90 bp GAAGAAAAACTTCCACATTCAAAAGAAAGACTAAACCATGCACAAATGAACCCTAGGTGGAAGTTGCAGTaGGCAGAGATCGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: EEKLPHSKERLNHAQMNPRWKLQ*AEIAPL
Trigger: CAATGGCGCGATCTCTGCTCACTGCAACTTCCACCT...AGGGTTCATTTGTGCATGGTTTAGTCTTTCTTTTGAATGTGGAAGTTTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524104.5
3UTR-3UTR CCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACTTTATAAGGATGCGGTaGCAGCCGCGGGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHFIRMR*QPRVLG
Trigger: TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAA...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTTTTATAAGGATGCGGTaGCAGCCGCGGGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIFIRMR*QPRVLG
Trigger: TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAA...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
3UTR-3UTR GCA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTGGAGATTCTGCTCACTaGTTAGCTGCAGGTAGTGGT +
Preference number: 2 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSGDSAH*LAAGSG
Trigger: ACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
3UTR-3UTR GCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCATTTCCCGGAGATTCTaGTCACTGCTTAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: IETIYMFFYQVNIPERVTISRRF*SLLSCR
Trigger: CCTGCAGCTAAGCAGTGAGCAGAATCTCCGGGAAAT...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR TCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGAGAGAGAGAATATAACTaGACACAAGCACCACGACAA +
Preference number: 2 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMREREYN*TQAPRQ
Trigger: TTGTCGTGGTGCTTGTGTTCAGTTATATTCTCTCTC...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR GCA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTCCACAAAGAACCTTCTaGTGCGACATTATGAAGATG +
Preference number: 2 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSPQRTF*CDIMKM
Trigger: CATCTTCATAATGTCGCAGCAGAAGGTTCTTTGTGG...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
3UTR-3UTR GCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCCCACAAAGAACCTTCTaGTGCGACATTATGAAGATG +
Preference number: 2 (lower is better)
Translates to: IETIYMFFYQVNIPERVTPQRTF*CDIMKM
Trigger: CATCTTCATAATGTCGCAGCAGAAGGTTCTTTGTGG...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR CCA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTTTGTTTCTCAGTTCCTaGAGTATGTTGAAACTACTT +
Preference number: 2 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFLFLSS*SMLKLL
Trigger: AAGTAGTTTCAACATACTCCAGGAACTGAGAAACAA...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CCA 90 bp TTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTTTAAAGCTGCCCAGGAAATCTTCATCTGTTTCTTaGACTTCACCTTTCATTCCC +
Preference number: 2 (lower is better)
Translates to: LISPHKVWASEFLKLPRKSSSVS*TSPFIP
Trigger: GGGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGA...TTTCCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521419.5
3UTR-3UTR CCA 90 bp CCATTATTCAACTATCTGGCCACTTCATTCTACTCAAAATGCAGATCCTTAGCAATGTCTAGGATTATCTaGTATAAGGACAAACCATGT +
Preference number: 2 (lower is better)
Translates to: PLFNYLATSFYSKCRSLAMSRII*YKDKPC
Trigger: ACATGGTTTGTCCTTATACCAGATAATCCTAGACAT...TGCTAAGGATCTGCATTTTGAGTAGAATGAAGTGGCCAGATAGTTGAATAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524104.5
3UTR-3UTR CCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCCACAATACACAGATTTaGAAACATATAACGTGTCCA +
Preference number: 2 (lower is better)
Translates to: IETIYMFFYQVNIPERVTHNTQI*KHITCP
Trigger: TGGACACGTTATATGTTTCCAAATCTGTGTATTGTG...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR CCA 90 bp GCAACCAGAAATTCTGATTTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTAGTCCACATAAAGTCTaGGCATCAGAATTTTTAAAG +
Preference number: 2 (lower is better)
Translates to: ATRNSDLISPHKVWASEFSPHKV*ASEFLK
Trigger: CTTTAAAAATTCTGATGCCCAGACTTTATGTGGACT...AAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATCAGAATTTCTGGTTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
3UTR CCA 72 bp CTGGATTCCAACATGCTGGCCCGGAGCGTGGCTGGCTaGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTC +
Preference number: 3 (lower is better)
Translates to: LDSNMLARSVAG*KQLQQVFPFPV
Trigger: GACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR CCA 72 bp CACGCTGGATTCCAACATGCTGGCCCGGAGCGTGGCTaGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCC +
Preference number: 3 (lower is better)
Translates to: HAGFQHAGPERG*LEATPTGFSLP
Trigger: GGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR CCA 72 bp GCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTaGCTGGCTGGAAGCAACTCCAACAGGTTTTTCCCT +
Preference number: 3 (lower is better)
Translates to: APRWIPTCWPGA*LAGSNSNRFFP
Trigger: AGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR CCA 72 bp TTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTaGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAAC +
Preference number: 3 (lower is better)
Translates to: FTASAPRWIPTC*PGAWLAGSNSN
Trigger: GTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR GCA 72 bp ATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATaGTGGCCCGGAGCGTGGCTGGCTGGAAGCAACTCC +
Preference number: 3 (lower is better)
Translates to: IFTASAPRWIPT*WPGAWLAGSNS
Trigger: GGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR CCA 72 bp GAAACCAACCACATTTTTACTGCATCTGCTCCACGCTaGATTCCAACATGCTGGCCCGGAGCGTGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: ETNHIFTASAPR*IPTCWPGAWLA
Trigger: AGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGTGGTTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CAA 90 bp CTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTCCAAGACGCCCCCTTACTaGCTAAGAGTATATGGAGCT +
Preference number: 3 (lower is better)
Translates to: LDANREWLQHTDGGGRDSKTPPY*LRVYGA
Trigger: AGCTCCATATACTCTTAGCAAGTAAGGGGGCGTCTT...GGAATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR TCA 72 bp ATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCGGTGGCAGCCGCGGGT +
Preference number: 3 (lower is better)
Translates to: IHFPEHRHPHAC*QVYKDAVAAAG
Trigger: ACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
3UTR GCA 72 bp GGCCAGACTAAGTCATTTCCCGGAGATTCTGCTCACTaGTTAGCTGCAGGTAGTGGTCCATCAATGACAGAG +
Preference number: 3 (lower is better)
Translates to: GQTKSFPGDSAH*LAAGSGPSMTE
Trigger: CTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCCGGGAAATGACTTAGTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR CAA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCTTCCACAGCACATCATaGGTTCATTTTCGAATTGTC +
Preference number: 3 (lower is better)
Translates to: NTLDANREWLQHTDGGGRFHSTS*VHFRIV
Trigger: GACAATTCGAAAATGAACCAATGATGTGCTGTGGAA...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CAA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCCCAGTGAAACAGAATaGTTGGTACTATCTGAGGCA +
Preference number: 3 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYPSETE*LVLSEA
Trigger: TGCCTCAGATAGTACCAACAATTCTGTTTCACTGGG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR CAA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATTCACAATACACAGATTaGGAAACATATAACGTGTCC +
Preference number: 3 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYSQYTD*ETYNVS
Trigger: GGACACGTTATATGTTTCCAAATCTGTGTATTGTGA...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR CAA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTAAGACGCCCCCTTACTaGCTAAGAGTATATGGAGCT +
Preference number: 3 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFKTPPY*LRVYGA
Trigger: AGCTCCATATACTCTTAGCAAGTAAGGGGGCGTCTT...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR TCA 72 bp ACTTTTAACCACAAAGAACCTTCTGCTGCGACATTATaGAGATGGGCTATGCATGTGGCCAGACTAAGTCAT +
Preference number: 3 (lower is better)
Translates to: TFNHKEPSAATL*RWAMHVARLSH
Trigger: ATGACTTAGTCTGGCCACATGCATAGCCCATCTTCATAATGTCGCAGCAGAAGGTTCTTTGTGGTTAAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR-3UTR CAA 90 bp CTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTCGTGTTAGAATAGTGTaGTCTTCACATAAGACTCAA +
Preference number: 3 (lower is better)
Translates to: LAGSNSNRFFPSPSCTLFRVRIV*SSHKTQ
Trigger: TTGAGTCTTATGTGAAGACAACACTATTCTAACACG...AAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
3UTR-3UTR CAA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCCCCAGTGAAACAGAATaGTTGGTACTATCTGAGGCA +
Preference number: 3 (lower is better)
Translates to: IETIYMFFYQVNIPERVTPSETE*LVLSEA
Trigger: TGCCTCAGATAGTACCAACAATTCTGTTTCACTGGG...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
3UTR CCA 72 bp ACCAGAAATTCTGATTTAATTAGTCCACATAAAGTCTaGGCATCAGAATTTTTAAAGCTGCCCAGGAAAGCC +
Preference number: 3 (lower is better)
Translates to: TRNSDLISPHKV*ASEFLKLPRKA
Trigger: GGCTTTCCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATCAGAATTTCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
3UTR-3UTR CAA 90 bp TTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAACTCTTCATCTGTTTCTaGGACTTCACCTTTCATTCC +
Preference number: 3 (lower is better)
Translates to: LGVFKRDTVCSISKICLQLFICF*DFTFHS
Trigger: GGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGAG...TTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521419.5
3UTR-3UTR CAA 90 bp CTTAAATCAAATTGCAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTTCACAATACACAGATTaGGAAACATATAACGTGTCC +
Preference number: 3 (lower is better)
Translates to: LKSNCNGQGKPKKGLHNISQYTD*ETYNVS
Trigger: GGACACGTTATATGTTTCCAAATCTGTGTATTGTGA...AATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGGCAGCCGCGGGTTCTaGGAGCTGCTAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAGSRGF*ELLDGR
Trigger: TCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTGCC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGATGCTGGCCCGGAGCGTaGCTGGCTGGAAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGCWPGA*LAGSNS
Trigger: GGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCA...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGATTTCTTGCAGTCCTaGGCGATGGAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGADFLQS*AMEPGG
Trigger: ACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCCGCTGGATTCCAACATaGTGGCCCGGAGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: NTLDANREWLQHTDGGGRRWIPT*WPGAWL
Trigger: CAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCG...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTCGGAGCGTGGCTGGCTaGAAGCAACTCCAACAGGTT +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGARSVAG*KQLQQV
Trigger: AACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCG...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGG +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGALPGTL*RRLQHW
Trigger: CCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAA...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGATTGCCGGGGACACTTTaGAGACGGCTCCAACATTGG +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGLPGTL*RRLQHW
Trigger: CCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAA...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTCGCTGGATTCCAACATaGTGGCCCGGAGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERRWIPT*WPGAWL
Trigger: CAGCCACGCTCCGGGCCAGCATGTTGGAATCCAGCG...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTTTTATAAGGATGCGGTaGCAGCCGCGGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAFIRMR*QPRVLG
Trigger: TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAA...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTGCATCTGCTCCACGCTaGATTCCAACATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAIASAPR*IPTCWP
Trigger: GGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGC...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCACTTAAGGCTGCCTaGTCATGGCTGGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGALKAA*SWLASM
Trigger: CATTGAAGCCAGCCATGATCAGGCAGCCTTAAGTGC...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR TCA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGATTTCTTGCAGTCCTaGGCGATGGAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERDFLQS*AMEPGG
Trigger: ACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATC...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTCTAGACGGCCGAGTTTaGTTTCTTGCAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGALDGRV*FLAVLS
Trigger: GCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAG...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCG +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGHPHAC*QVYKDA
Trigger: CGCATCCTTATAAACCTGTCAGCACGCATGAGGGTG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTCACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCG +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAHPHAC*QVYKDA
Trigger: CGCATCCTTATAAACCTGTCAGCACGCATGAGGGTG...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATTGCCCCTCTGTGCTGTaGAGGGGACGCGCGACCATC +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYCPSVL*RGRATI
Trigger: GATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCA...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATGGATCCGTGATCACCTaGTCGCCAAGACCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYGSVIT*SPRPAA
Trigger: CGCCGCGGGTCTTGGCGAGCAGGTGATCACGGATCC...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCTCCGGCCGCCGCTGTaGAACGCACGGTTTAGCGGA +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYLRPPL*NARFSG
Trigger: TCCGCTAAACCGTGCGTTGCACAGCGGCGGCCGGAG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCAATGATACCTTCTTaGCGGGGACACTTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGAMIPS*RGHFAD
Trigger: GTCTGCAAAGTGTCCCCGGCAAGAAGGTATCATTGC...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523558.5
CDS-3UTR GCA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCCCGAGTTTGATTTCTTaGAGTCCTGAGCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: NTLDANREWLQHTDGGGRPSLIS*SPERWS
Trigger: GCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGG...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACCCTTGGCCATATTCTaGTCCGGCCTTTACTATTGT +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGPLAIF*SGLYYC
Trigger: ACAATAGTAAAGGCCGGACCAGAATATGGCCAAGGG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCCAAGACCCGCGGCGTaGCCAGACCTCCTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYPRPAA*PDLLFY
Trigger: GTAGAAGAGGAGGTCTGGCCACGCCGCGGGTCTTGG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTAGGTTCATTCTGCAGTaGTTGGAGGGCTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAIRFILQ*LEGFHC
Trigger: GCAATGAAAGCCCTCCAAGCACTGCAGAATGAACCT...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTCAACCACATTTTTACTaGATCTGCTCCACGCTGGAT +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAQPHFY*ICSTLD
Trigger: ATCCAGCGTGGAGCAGATGCAGTAAAAATGTGGTTG...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACAACCACATTTTTACTaGATCTGCTCCACGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGQPHFY*ICSTLD
Trigger: ATCCAGCGTGGAGCAGATGCAGTAAAAATGTGGTTG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACATTGCTCCATCGATTaGATCCAGTCCTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGHCSID*IQSLFR
Trigger: TCTGAACAAGGACTGGATCCAATCGATGGAGCAATG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AACATGCTGGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAACAGGTTTTTCCCGGCTCCAAAAACTTCTaGGCCTTGGTTCAAATTACT +
Preference number: 4 (lower is better)
Translates to: NMLARSVAGWKQLQQVFPGSKNF*ALVQIT
Trigger: AGTAATTTGAACCAAGGCTCAGAAGTTTTTGGAGCC...GGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524300.6
CDS-3UTR TCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTCCTGATTCACCATTCTaGGGAGATCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAPDSPF*GDLSGI
Trigger: TATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGG...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGAGAGAGAATATAACTaGACACAAGCACCACGACAA +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAEREYN*TQAPRQ
Trigger: TTGTCGTGGTGCTTGTGTTCAGTTATATTCTCTCTC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACCATGTGACTCTATATaGAGACAACCATCACATTCC +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGPCDSI*RQPSHS
Trigger: GGAATGTGATGGTTGTCTTCATATAGAGTCACATGG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTTGGAATCCGGGAAGATaGTATATAGGGGCAAGACGC +
Preference number: 4 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERWNPGR*YIGARR
Trigger: GCGTCTTGCCCCTATATATCATCTTCCCGGATTCCA...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATAACACCAGGGATCCGTaGTCACCTGCTCGCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYNTRDP*SPARQD
Trigger: GTCTTGGCGAGCAGGTGATCACGGATCCCTGGTGTT...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR CCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGGGCAGCCGCGGGTTCTaGGAGCTGCTAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAGSRGF*ELLDGR
Trigger: TCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTGCC...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TCTGCTGCCTCTAGGCAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGGCCCGGAGCGTGGCTaGCTGGAAGCAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: SAASRQMSYDLISSSKGNGPERG*LEATPT
Trigger: TGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCC...ATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTGCCTAGAGGCAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGCTTTCTCTCTCAGATaGTTGGCTTGTTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAAFSLR*LACFSR
Trigger: TCTTGAAAAACAAGCCAAGCATCTGAGAGAGAAAGC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AACATGCTGGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTGTCAAGCAGTATTTaGAATGAGAGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: NMLARSVAGWKQLQQVFPLSSSI*NERERE
Trigger: TTCTCTCTCTCTCTCATTTCAAATACTGCTTGACAA...GGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTTTGCCTACCTTCACCTaGATCACAAATTCTCGACGT +
Preference number: 4 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERLPTFT*ITNSRR
Trigger: ACGTCGAGAATTTGTGATGCAGGTGAAGGTAGGCAA...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCCGACCATCCCGCGTCTaGTCCGGCCGCCGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTRPSRV*SGRRCA
Trigger: TGCACAGCGGCGGCCGGAGCAGACGCGGGATGGTCG...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTCCGGCTGCCCCTCTGTaGTGTGCAGGGGACGCGCGA +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSPAAPL*CAGDAR
Trigger: TCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGG...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGATTTTTCGATATTCATTaGTCCATCGATTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGFFDIH*SIDWIQ
Trigger: CTGGATCCAATCGATGGAGCAATGAATATCGAAAAA...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp AACATGCTGGCCCGGAGCGTGGCTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTTTTCGATATTCATTaGTCCATCGATTGGATCCAG +
Preference number: 4 (lower is better)
Translates to: NMLARSVAGWKQLQQVFPFFDIH*SIDWIQ
Trigger: CTGGATCCAATCGATGGAGCAATGAATATCGAAAAA...GGGAAAAACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGGCAGCCGCGGGTTCTaGGAGCTGCTAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHGSRGF*ELLDGR
Trigger: TCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTGCC...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACTTGCTAAGAGTATATaGAGCTCAAAACCCACAATT +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGLAKSI*SSKPTI
Trigger: AATTGTGGGTTTTGAGCTCCATATACTCTTAGCAAG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCCTTCCATTTCCGAGCTaGGCCATAACACAGCAAAAT +
Preference number: 4 (lower is better)
Translates to: CMCAHSFHFDGLPFPSWALPFPS*AITQQN
Trigger: ATTTTGCTGTGTTATGGCCCAGCTCGGAAATGGAAG...GGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR TCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATAAGACTCAGCTGCACTaGGAACATCTTTCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYKTQLH*EHLSQA
Trigger: AGCCTGGGAAAGATGTTCTCAGTGCAGCTGAGTCTT...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR TCA 90 bp CCTTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTAACACTACAGAGAACTaGCCCCGCTCGGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PLGVFKRDTVCSISKICLNTTEN*PRSAAA
Trigger: GGCGGCGGCCGAGCGGGGTCAGTTCTCTGTAGTGTT...AAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATATTTCCCGGAGATTCTaGTCACTGCTTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYISRRF*SLLSCR
Trigger: CCTGCAGCTAAGCAGTGAGCAGAATCTCCGGGAAAT...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTCCCAGGCTCTCCGGCTaGCCCTCTGTGCTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSPRLSG*PSVLCR
Trigger: CCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGG...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR GCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCGGGCGGGGAGGAGGTTaGTTCACCGTCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTGRGGG*FTVSPS
Trigger: GCTGGGCGAGACGGTGAAGCAACCTCCTCCCCGCCC...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR CCA 90 bp TGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCATAACAGAGCTTCCAATAGCATaGAAAGTCATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: CAHSFHFDGLPFPSWAITELPIA*KVICTG
Trigger: CCCTGTGCAGATGACTTTCCATGCTATTGGAAGCTC...TGTTATGGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCGAGCCCGGGGGTGCCTaGTTATTGTCCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACEPGGA*LLSAFS
Trigger: AGAGAAAGCGGACAATAACCAGGCACCCCCGGGCTC...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTGGCAGCCGCGGGTTCTaGGAGCTGCTAGACGGCCGA +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIGSRGF*ELLDGR
Trigger: TCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTGCC...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCTCCACAGCACATCATTaGTTCATTTTCGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: NTLDANREWLQHTDGGGRSTAHH*FIFELS
Trigger: TGACAATTCGAAAATGAACCAATGATGTGCTGTGGA...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGATTGTTTCTCAGTTCCTaGAGTATGTTGAAACTACTT +
Preference number: 4 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGLFLSS*SMLKLL
Trigger: AAGTAGTTTCAACATACTCCAGGAACTGAGAAACAA...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGGCTACAACACACGGATaGGGGTGGGCGCGATTCCCA +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAATTHG*GWARFP
Trigger: TGGGAATCGCGCCCACCCCCATCCGTGTGTTGTAGC...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGATGCTGGCCCGGAGCGTaGCTGGCTGGAAGCAACTCC +
Preference number: 4 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMRCWPGA*LAGSNS
Trigger: GGAGTTGCTTCCAGCCAGCCACGCTCCGGGCCAGCA...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTTGGATTCCAACATGCTaGCCCGGAGCGTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFWIPTC*PGAWLA
Trigger: AGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCA...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGGATTCCAACATGCTaGCCCGGAGCGTGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAWIPTC*PGAWLA
Trigger: AGCCAGCCACGCTCCGGGCCAGCATGTTGGAATCCA...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCCTGGCAATTGTAGCTaGACTATTCGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYPGNCS*TIRCGR
Trigger: TCTCCCACATCGAATAGTTCAGCTACAATTGCCAGG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR TCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATTCTGCTGCGACATTATaGAGATGGGCTATGCATGTG +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYSAATL*RWAMHV
Trigger: CACATGCATAGCCCATCTTCATAATGTCGCAGCAGA...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR TCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTAGATTTCTTGCAGTCCTaGGCGATGGAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVDFLQS*AMEPGG
Trigger: ACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATC...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp TGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCATAACAGTGGCATATTATACCTaGTCATGGCTGGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: CAHSFHFDGLPFPSWAITVAYYT*SWLASM
Trigger: CATTGAAGCCAGCCATGATCAGGTATAATATGCCAC...TGTTATGGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATAGGTTCATTCTGCAGTaGTTGGAGGGCTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYRFILQ*LEGFHC
Trigger: GCAATGAAAGCCCTCCAAGCACTGCAGAATGAACCT...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp AAAGCTGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGCATGGAAAGTCATCTaGACAGGGGCTAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: KAACAHIASILMAFHFRAAWKVI*TGANVR
Trigger: TCTGACATTAGCCCCTGTGCAGATGACTTTCCATGC...AGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCCCTTGGCCATATTCTaGTCCGGCCTTTACTATTGT +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYPLAIF*SGLYYC
Trigger: ACAATAGTAAAGGCCGGACCAGAATATGGCCAAGGG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTTTATAAGGATGCGGTaGCAGCCGCGGGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACFIRMR*QPRVLG
Trigger: TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAA...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTAACACACGGATGGGGGTaGGCGCGATTCCCACAACAG +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVTHGWG*ARFPQQ
Trigger: CTGTTGTGGGAATCGCGCCCACCCCCATCCGTGTGT...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TCTGCTGCCTCTAGGCAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGATGCAAACCGTGAGTaGCTACAACACACGGATGGG +
Preference number: 4 (lower is better)
Translates to: SAASRQMSYDLISSSKGNDANRE*LQHTDG
Trigger: CCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATC...ATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTGCCTAGAGGCAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGAGGCCCGGAGCGTGGCTaGCTGGAAGCAACTCCAACA +
Preference number: 4 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMRGPERG*LEATPT
Trigger: TGTTGGAGTTGCTTCCAGCCAGCCACGCTCCGGGCC...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp CTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTCCTGGCAATTGTAGCTaGACTATTCGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LAGSNSNRFFPSPSCTLFPGNCS*TIRCGR
Trigger: TCTCCCACATCGAATAGTTCAGCTACAATTGCCAGG...AAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATTTGCCTACCTTCACCTaGATCACAAATTCTCGACGT +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYLPTFT*ITNSRR
Trigger: ACGTCGAGAATTTGTGATGCAGGTGAAGGTAGGCAA...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CCA 90 bp CTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTCCCTTGGCCATATTCTaGTCCGGCCTTTACTATTGT +
Preference number: 4 (lower is better)
Translates to: LAGSNSNRFFPSPSCTLFPLAIF*SGLYYC
Trigger: ACAATAGTAAAGGCCGGACCAGAATATGGCCAAGGG...AAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATACACACGGATGGGGGTaGGCGCGATTCCCACAACAG +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHTHGWG*ARFPQQ
Trigger: CTGTTGTGGGAATCGCGCCCACCCCCATCCGTGTGT...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCACAGCAAAATGGCAGTaGCATATTATACCTGATCAT +
Preference number: 4 (lower is better)
Translates to: CMCAHSFHFDGLPFPSWATAKWQ*HIIPDH
Trigger: ATGATCAGGTATAATATGCCACTGCCATTTTGCTGT...GGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CCA 90 bp TGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCCATAACACAGCAAAATaGCAGTGGCATATTATACCT +
Preference number: 4 (lower is better)
Translates to: CMCAHSFHFDGLPFPSWAHNTAK*QWHIIP
Trigger: AGGTATAATATGCCACTGCCATTTTGCTGTGTTATG...GGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR TCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATGGCTCCAAAAACTTCTaGGCCTTGGTTCAAATTACT +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYGSKNF*ALVQIT
Trigger: AGTAATTTGAACCAAGGCTCAGAAGTTTTTGGAGCC...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR TCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCCTGATTCACCATTCTaGGGAGATCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYPDSPF*GDLSGI
Trigger: TATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR TCA 90 bp TGTATTAAGGAAAGCAAAGCTGCATGTGCGCACATAGCTTCCATTTTGATGGCCCCTGGCAATTGTAGCTaGACTATTCGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: CIKESKAACAHIASILMAPGNCS*TIRCGR
Trigger: TCTCCCACATCGAATAGTTCAGCTACAATTGCCAGG...GGCCATCAAAATGGAAGCTATGTGCGCACATGCAGCTTTGCTTTCCTTAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR TCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGATTTCTTGCAGTCCTaGGCGATGGAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHDFLQS*AMEPGG
Trigger: ACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTGGAATCCGGGAAGATaGTATATAGGGGCAAGACGC +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACWNPGR*YIGARR
Trigger: GCGTCTTGCCCCTATATATCATCTTCCCGGATTCCA...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp CCATTATTCAACTATCTGGCCACTTCATTCTACTCAAAATGCAGATCCTTAGCAAGGTGGAAGTTGCAGTaGGCAGAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: PLFNYLATSFYSKCRSLARWKLQ*AEIAPL
Trigger: CAATGGCGCGATCTCTGCTCACTGCAACTTCCACCT...TGCTAAGGATCTGCATTTTGAGTAGAATGAAGTGGCCAGATAGTTGAATAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR GCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCCACAAAGAACCTTCTaGTGCGACATTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYPQRTF*CDIMKM
Trigger: CATCTTCATAATGTCGCAGCAGAAGGTTCTTTGTGG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp AAAGCTGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTAGGTCACACACTCTTTaGCACTTTGTCTATCACAGT +
Preference number: 4 (lower is better)
Translates to: KAACAHIASILMAFHFRARSHTL*HFVYHS
Trigger: ACTGTGATAGACAAAGTGGCAAAGAGTGTGTGACCT...AGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR GCA 90 bp TCTTCAAATCCCTTTTACCATGGAACATCTTATAACACTGACTTAGGTAACTCTATGCTGGCAGGCGCCTaGAATCCCAGCTACTCGGGA +
Preference number: 4 (lower is better)
Translates to: SSNPFYHGTSYNTDLGNSMLAGA*NPSYSG
Trigger: TCCCGAGTAGCTGGGATTGCAGGCGCCTGCCAGCAT...AGAGTTACCTAAGTCAGTGTTATAAGATGTTCCATGGTAAAAGGGATTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR GCA 90 bp AAAGCTGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTAAGCAAAGCTGCATGTaGGCACATAGCTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: KAACAHIASILMAFHFRAKQSCM*AHSFHF
Trigger: AAAATGGAAGCTATGTGCGCACATGCAGCTTTGCTT...AGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCCTGCCTGATCATGGCTaGCTTCAATGGAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACLPDHG*LQWSFQ
Trigger: TTGGAAGCTCCATTGAAGCCAGCCATGATCAGGCAG...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR CCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGAGAGCCCGGGGGTGCCTaGTTATTGTCCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMREPGGA*LLSAFS
Trigger: AGAGAAAGCGGACAATAACCAGGCACCCCCGGGCTC...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGAGCCCGGGGGTGCCTaGTTATTGTCCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHEPGGA*LLSAFS
Trigger: AGAGAAAGCGGACAATAACCAGGCACCCCCGGGCTC...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCGGAGCGTGGCTGGCTaGAAGCAACTCCAACAGGTT +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHRSVAG*KQLQQV
Trigger: AACCTGTTGGAGTTGCTTCCAGCCAGCCACGCTCCG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCATCTGCTCCACGCTaGATTCCAACATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHASAPR*IPTCWP
Trigger: GGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGC...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTACTAGACGGCCGAGTTTaGTTTCTTGCAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVLDGRV*FLAVLS
Trigger: GCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAG...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTACACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCG +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVHPHAC*QVYKDA
Trigger: CGCATCCTTATAAACCTGTCAGCACGCATGAGGGTG...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGCCGAGTTTGATTTCTTaGAGTCCTGAGCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAPSLIS*SPERWS
Trigger: GCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGG...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTGAGCCCGGGGGTGCCTaGTTATTGTCCGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIEPGGA*LLSAFS
Trigger: AGAGAAAGCGGACAATAACCAGGCACCCCCGGGCTC...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TGTATTAAGGAAAGCAAAGCTGCATGTGCGCACATAGCTTCCATTTTGATGGCCATACCTGATCATGGCTaGCTTCAATGGAGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: CIKESKAACAHIASILMAIPDHG*LQWSFQ
Trigger: TTGGAAGCTCCATTGAAGCCAGCCATGATCAGGTAT...GGCCATCAAAATGGAAGCTATGTGCGCACATGCAGCTTTGCTTTCCTTAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR TCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGCCTGGCAATTGTAGCTaGACTATTCGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAPGNCS*TIRCGR
Trigger: TCTCCCACATCGAATAGTTCAGCTACAATTGCCAGG...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCTAGACGGCCGAGTTTaGTTTCTTGCAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHLDGRV*FLAVLS
Trigger: GCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCACCCTCATGCGTGCTaGCAGGTTTATAAGGATGCG +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHHPHAC*QVYKDA
Trigger: CGCATCCTTATAAACCTGTCAGCACGCATGAGGGTG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp TTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTTTAAAGCTGCCCAGGAAACTGCCCAGGAAAGCCTaGTGTTCAGTCAGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: LISPHKVWASEFLKLPRKLPRKA*CSVSVR
Trigger: CCTAACACTGACTGAACATCAGGCTTTCCTGGGCAG...TTTCCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR TCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTTTAGGCACTGGGCAATaGTACCTTCTTGCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFILGTGQ*YLLAGD
Trigger: GTCCCCGGCAAGAAGGTATCATTGCCCAGTGCCTAA...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523558.5
CDS-3UTR GCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGG +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSLPGTL*RRLQHW
Trigger: CCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAA...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR GCA 90 bp CTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGG +
Preference number: 4 (lower is better)
Translates to: LQERYSMQHFQNLSSNPFLPGTL*RRLQHW
Trigger: CCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAA...AAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR GCA 90 bp AGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCATTGCCGGGGACACTTTaGAGACGGCTCCAACATTGG +
Preference number: 4 (lower is better)
Translates to: REIQYAAFPKFVFKSLLPLPGTL*RRLQHW
Trigger: CCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAA...TGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR GCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGAGGTTCATTCTGCAGTaGTTGGAGGGCTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHARFILQ*LEGFHC
Trigger: GCAATGAAAGCCCTCCAAGCACTGCAGAATGAACCT...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTTGCCTACCTTCACCTaGATCACAAATTCTCGACGT +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACLPTFT*ITNSRR
Trigger: ACGTCGAGAATTTGTGATGCAGGTGAAGGTAGGCAA...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGGCATGGAAAGTCATCTaGACAGGGGCTAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAAWKVI*TGANVR
Trigger: TCTGACATTAGCCCCTGTGCAGATGACTTTCCATGC...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR GCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTACCGAGTTTGATTTCTTaGAGTCCTGAGCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVPSLIS*SPERWS
Trigger: GCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGG...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp GATTTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTTTAAAGCTGCCCAGGGCTCCAAAAACTTCTTaGCGGGGACACTTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: DLISPHKVWASEFLKLPRAPKTS*RGHFAD
Trigger: GTCTGCAAAGTGTCCCCGGCAAGAAGTTTTTGGAGC...CCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CCA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTCCCTTGGCCATATTCTaGTCCGGCCTTTACTATTGT +
Preference number: 4 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFPLAIF*SGLYYC
Trigger: ACAATAGTAAAGGCCGGACCAGAATATGGCCAAGGG...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTACCTGGCAATTGTAGCTaGACTATTCGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVPGNCS*TIRCGR
Trigger: TCTCCCACATCGAATAGTTCAGCTACAATTGCCAGG...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCTAGACGGCCGAGTTTaGTTTCTTGCAGTCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHLDGRV*FLAVLS
Trigger: GCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAG...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp GATTTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTTTAAAGCTGCCCAGGAAGTGTTGCCATCTCTaGTTGTACATGCCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: DLISPHKVWASEFLKLPRKCCHL*LYMPRK
Trigger: CTTTCGGGGCATGTACAATCAGAGATGGCAACACTT...CCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR TCA 90 bp ATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCATGGAACCTGCCCAGGAAAGCCTaGTGTTCAGTCAGTGTTAGG +
Preference number: 4 (lower is better)
Translates to: IQYAAFPKFVFKSLLPWNLPRKA*CSVSVR
Trigger: CCTAACACTGACTGAACATCAGGCTTTCCTGGGCAG...GTTCCATGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR TCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCGAGAGAGAATATAACTaGACACAAGCACCACGACAA +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACEREYN*TQAPRQ
Trigger: TTGTCGTGGTGCTTGTGTTCAGTTATATTCTCTCTC...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp TTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAGGCAGGAGAATCACTTaGACCTGGGAGGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: FRSLQERYSMQHFQNLSSGRRIT*TWEVEV
Trigger: AACTTCCACCTCCCAGGTTCAAGTGATTCTCCTGCC...TGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR GCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCCGAGTTTGATTTCTTaGAGTCCTGAGCGATGGAGC +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHPSLIS*SPERWS
Trigger: GCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCCGGTTTAGCGGATCTTaGACCTTTCTAGACGGGGGA +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTRFSGS*TFLDGG
Trigger: TCCCCCGTCTAGAAAGGTGCAAGATCCGCTAAACCG...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR CCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGAGACGGCTCCAACATTaGCAAACACTACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHARRLQH*QTLQRT
Trigger: AGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCT...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCACAATACACAGATTTaGAAACATATAACGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYHNTQI*KHITCP
Trigger: TGGACACGTTATATGTTTCCAAATCTGTGTATTGTG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGCATTGCTCCATCGATTaGATCCAGTCCTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAHCSID*IQSLFR
Trigger: TCTGAACAAGGACTGGATCCAATCGATGGAGCAATG...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTTCCACAGCACATCATTaGTTCATTTTCGAATTGTCA +
Preference number: 4 (lower is better)
Translates to: LAGSNSNRFFPSPSCTLFSTAHH*FIFELS
Trigger: TGACAATTCGAAAATGAACCAATGATGTGCTGTGGA...AAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGATGCAAACCGTGAGTaGCTACAACACACGGATGGG +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHDANRE*LQHTDG
Trigger: CCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGGGCTCCAAAAACTTCTaGGCCTTGGTTCAAATTACT +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAGSKNF*ALVQIT
Trigger: AGTAATTTGAACCAAGGCTCAGAAGTTTTTGGAGCC...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGCCTGATTCACCATTCTaGGGAGATCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAPDSPF*GDLSGI
Trigger: TATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGG...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCCTGGCAATTGTAGCTaGACTATTCGATGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHPGNCS*TIRCGR
Trigger: TCTCCCACATCGAATAGTTCAGCTACAATTGCCAGG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp CTTAAATCAAATTGCAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTGGAGATTCTGCTCACTaGTTAGCTGCAGGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: LKSNCNGQGKPKKGLHNIGDSAH*LAAGSG
Trigger: ACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC...AATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR GCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCGGAGATTCTGCTCACTaGTTAGCTGCAGGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTGDSAH*LAAGSG
Trigger: ACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp CTTAAATCAAATTGCAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTATTTCCCGGAGATTCTaGTCACTGCTTAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LKSNCNGQGKPKKGLHNIISRRF*SLLSCR
Trigger: CCTGCAGCTAAGCAGTGAGCAGAATCTCCGGGAAAT...AATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCCCTTGGCCATATTCTaGTCCGGCCTTTACTATTGT +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHPLAIF*SGLYYC
Trigger: ACAATAGTAAAGGCCGGACCAGAATATGGCCAAGGG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTCTCTCTCAGATGCTTaGCTTGTTTTTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACSLSDA*LVFQEN
Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGA...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TCTGCTGCCTCTAGGCAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATCTTGCTAAGAGTATATaGAGCTCAAAACCCACAATT +
Preference number: 4 (lower is better)
Translates to: SAASRQMSYDLISSSKGNLAKSI*SSKPTI
Trigger: AATTGTGGGTTTTGAGCTCCATATACTCTTAGCAAG...ATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTGCCTAGAGGCAGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp GATTTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTTTAAAGCTGCCCAGGGGCTCCAAAAACTTCTaGGCCTTGGTTCAAATTACT +
Preference number: 4 (lower is better)
Translates to: DLISPHKVWASEFLKLPRGSKNF*ALVQIT
Trigger: AGTAATTTGAACCAAGGCTCAGAAGTTTTTGGAGCC...CCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR TCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTACCTGATTCACCATTCTaGGGAGATCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVPDSPF*GDLSGI
Trigger: TATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGG...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTTCTGCTGCGACATTATaGAGATGGGCTATGCATGTG +
Preference number: 4 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSSAATL*RWAMHV
Trigger: CACATGCATAGCCCATCTTCATAATGTCGCAGCAGA...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR TCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCTCTGCTGCGACATTATaGAGATGGGCTATGCATGTG +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTSAATL*RWAMHV
Trigger: CACATGCATAGCCCATCTTCATAATGTCGCAGCAGA...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACAGGTTCATTCTGCAGTaGTTGGAGGGCTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHRFILQ*LEGFHC
Trigger: GCAATGAAAGCCCTCCAAGCACTGCAGAATGAACCT...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TCTGCTGCCTCTAGGCAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATTGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: SAASRQMSYDLISSSKGNWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...ATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTGCCTAGAGGCAGCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTCCCTTGGCCATATTCTaGTCCGGCCTTTACTATTGT +
Preference number: 4 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSPLAIF*SGLYYC
Trigger: ACAATAGTAAAGGCCGGACCAGAATATGGCCAAGGG...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR CCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGAGCTTCCAATAGCATaGAAAGTCATCTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHELPIA*KVICTG
Trigger: CCCTGTGCAGATGACTTTCCATGCTATTGGAAGCTC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCATTGCTCCATCGATTaGATCCAGTCCTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHHCSID*IQSLFR
Trigger: TCTGAACAAGGACTGGATCCAATCGATGGAGCAATG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGACATTGCTCCATCGATTaGATCCAGTCCTTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMRHCSID*IQSLFR
Trigger: TCTGAACAAGGACTGGATCCAATCGATGGAGCAATG...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTCTCTCTCAGATGCTTaGCTTGTTTTTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHASLSDA*LVFQEN
Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGA...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp CCTTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTGAAAAGACATCTCCTTaGATCTTTGGCTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PLGVFKRDTVCSISKICLEKTSP*IFGSRV
Trigger: GACTCTGGAGCCAAAGATCCAAGGAGATGTCTTTTC...AAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR TCA 90 bp CCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTTGAAATGAGACCATGTGACTCTATATaGAGACAACCATCACATTCC +
Preference number: 4 (lower is better)
Translates to: PQHIIGSFSNCQAVFEMRPCDSI*RQPSHS
Trigger: GGAATGTGATGGTTGTCTTCATATAGAGTCACATGG...TCTCATTTCAAATACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp GCAACCAGAAATTCTGATTTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTGTAACTCTTCATCTCTaGTTGTACATGCCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: ATRNSDLISPHKVWASEFVTLHL*LYMPRK
Trigger: CTTTCGGGGCATGTACAATCAGAGATGAAGAGTTAC...AAATTCTGATGCCCAGACTTTATGTGGACTAATTAAATCAGAATTTCTGGTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR GCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTTTGCCTACCTTCACCTaGATCACAAATTCTCGACGT +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSLPTFT*ITNSRR
Trigger: ACGTCGAGAATTTGTGATGCAGGTGAAGGTAGGCAA...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTTTGCCTACCTTCACCTaGATCACAAATTCTCGACGT +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFILPTFT*ITNSRR
Trigger: ACGTCGAGAATTTGTGATGCAGGTGAAGGTAGGCAA...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCCAGTTGGAGTTATACTaGCTGATTTATTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACQLELY*LIYLKH
Trigger: ATGCTTCAAATAAATCAGGCAGTATAACTCCAACTG...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR GCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTAGCTTTCTCTCTCAGATaGTTGGCTTGTTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVAFSLR*LACFSR
Trigger: TCTTGAAAAACAAGCCAAGCATCTGAGAGAGAAAGC...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp AACTCTTCATCTGTTTCTTGGACTTCACCTTTCATTCCCTGCCTTAAGAAGCTATCACCTTTCATTCCCTaGCTTAAGAAGCTAATGATT +
Preference number: 4 (lower is better)
Translates to: NSSSVSWTSPFIPCLKKLSPFIP*LKKLMI
Trigger: AATCATTAGCTTCTTAAGGCAGGGAATGAAAGGTGA...TAGCTTCTTAAGGCAGGGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTAGACGGCTCCAACATTaGCAAACACTACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSRRLQH*QTLQRT
Trigger: AGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCT...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CCA 90 bp TCTTCAAATCCCTTTTACCATGGAACATCTTATAACACTGACTTAGGTAACTCTAGACGGCTCCAACATTaGCAAACACTACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: SSNPFYHGTSYNTDLGNSRRLQH*QTLQRT
Trigger: AGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCT...AGAGTTACCTAAGTCAGTGTTATAAGATGTTCCATGGTAAAAGGGATTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CCA 90 bp AGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCAAGACGGCTCCAACATTaGCAAACACTACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: REIQYAAFPKFVFKSLLPRRLQH*QTLQRT
Trigger: AGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCT...TGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTAGACGGCTCCAACATTaGCAAACACTACAGAGAACT +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIRRLQH*QTLQRT
Trigger: AGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCT...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATCTCTCTCAGATGCTTaGCTTGTTTTTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVSLSDA*LVFQEN
Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGA...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp TTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAATCTCCTTGGATCTTTaGCTCCAGAGTCCCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FRSLQERYSMQHFQNLSSISLDL*LQSPCN
Trigger: ATTACAGGGACTCTGGAGCCAAAGATCCAAGGAGAT...TGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CCA 90 bp AACAGTTTTCTTCATGACACCTTTAGGAGTCTTCAAGAGAGATACAGTATGCAGTCTTCATCTGTTTCTTaGACTTCACCTTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: NSFLHDTFRSLQERYSMQSSSVS*TSPFIP
Trigger: GGGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGA...CTGCATACTGTATCTCTCTTGAAGACTCCTAAAGGTGTCATGAAGAAAACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CCA 90 bp GAAGAAAAACTTCCACATTCAAAAGAAAGACTAAACCATGCACAAATGAACCCTGAGGGTAATGTGTTTTaGGTTGTGGGGACCAGTATT +
Preference number: 4 (lower is better)
Translates to: EEKLPHSKERLNHAQMNPEGNVF*VVGTSI
Trigger: AATACTGGTCCCCACAACCCAAAACACATTACCCTC...AGGGTTCATTTGTGCATGGTTTAGTCTTTCTTTTGAATGTGGAAGTTTTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR TCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTCCTGATTCACCATTCTaGGGAGATCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSPDSPF*GDLSGI
Trigger: TATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGG...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR TCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTCCTGATTCACCATTCTaGGGAGATCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIPDSPF*GDLSGI
Trigger: TATTCCAGAAAGATCTCCTCAGAATGGTGAATCAGG...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGTTCCTGGAGTATGTTaGAACTACTTGCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHVPGVC*NYLLLT
Trigger: TGTTAAGAGCAAGTAGTTTCAACATACTCCAGGAAC...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR GCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTCCACAAAGAACCTTCTaGTGCGACATTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSPQRTF*CDIMKM
Trigger: CATCTTCATAATGTCGCAGCAGAAGGTTCTTTGTGG...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR GCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACAGGTCACACACTCTTTaGCACTTTGTCTATCACAGT +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHRSHTL*HFVYHS
Trigger: ACTGTGATAGACAAAGTGGCAAAGAGTGTGTGACCT...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR CCA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTTGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATTCTCTCTCAGATGCTTaGCTTGTTTTTCAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHSLSDA*LVFQEN
Trigger: GTTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGA...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCAAGACTCAGCTGCACTaGGAACATCTGATTTATTTG +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTKTQLH*EHLIYL
Trigger: CAAATAAATCAGATGTTCTCAGTGCAGCTGAGTCTT...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR GCA 90 bp CTTAAATCAAATTGCAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTAGGCTTAAATCAAATTaGAATGGGCAAGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LKSNCNGQGKPKKGLHNIRLKSN*NGQGKP
Trigger: TGGCTTTCCTTGCCCATTGCAATTTGATTTAAGCCT...AATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR GCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTGCTTTCTCTCTCAGATaGTTGGCTTGTTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIAFSLR*LACFSR
Trigger: TCTTGAAAAACAAGCCAAGCATCTGAGAGAGAAAGC...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGCTTTCTCTCTCAGATaGTTGGCTTGTTTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHAFSLR*LACFSR
Trigger: TCTTGAAAAACAAGCCAAGCATCTGAGAGAGAAAGC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR GCA 90 bp CAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACAAGGAGCAAGCAATATaGAAAGGTGCACTGACAAAA +
Preference number: 4 (lower is better)
Translates to: QERYSMQHFQNLSSNPFYKEQAI*KGALTK
Trigger: TTTTGTCAGTGCACCTTTGCATATTGCTTGCTCCTT...GTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR TCA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACTTGTCAAGCAGTATTTaGAATGAGAGAGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHLSSSI*NERERE
Trigger: TTCTCTCTCTCTCTCATTTCAAATACTGCTTGACAA...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR TCA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCAAAAATGAGAACCATTaGAAACAATGCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: IETIYMFFYQVNIPERVTKNENH*KQCPES
Trigger: GGATTCAGGGCATTGTTTTCAATGGTTCTCATTTTT...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS-3UTR CCA 90 bp CCTTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTAGTCCACATAAAGTCTaGGCATCAGAATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: PLGVFKRDTVCSISKICLSPHKV*ASEFLK
Trigger: CTTTAAAAATTCTGATGCCCAGACTTTATGTGGACT...AAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
3UTR CAA 72 bp CTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTaGTCTTCAAATCCCTTTTACCATGGAACATCTTAT +
Preference number: 4 (lower is better)
Translates to: LQERYSMQHFQN*SSNPFYHGTSY
Trigger: ATAAGATGTTCCATGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CCA 90 bp CTTAAATCAAATTGCAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTTGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: LKSNCNGQGKPKKGLHNIWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...AATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CCA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTTGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR CCA 90 bp TCAAATCCCTTTTACCATGGAACATCTTATAACACTGACTTAGGTAACTCTTCATGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: SNPFYHGTSYNTDLGNSSWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...TGAAGAGTTACCTAAGTCAGTGTTATAAGATGTTCCATGGTAAAAGGGATTTGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CCA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTTGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: SELECNLCFVSIRMQCYSWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CCA 90 bp AAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCTGGAGTTATACTGCCTaGGTTATTGTTAACATTACT +
Preference number: 4 (lower is better)
Translates to: KRDTVCSISKICLQIPFTWSYTA*VIVNIT
Trigger: AGTAATGTTAACAATAACCCAGGCAGTATAACTCCA...GGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CCA 90 bp AGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCAAGTCCACATAAAGTCTaGGCATCAGAATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: REIQYAAFPKFVFKSLLPSPHKV*ASEFLK
Trigger: CTTTAAAAATTCTGATGCCCAGACTTTATGTGGACT...TGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CCA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTTTGTTTCTCAGTTCCTaGAGTATGTTGAAACTACTT +
Preference number: 4 (lower is better)
Translates to: QMSYDLISSSKGNAQSFILFLSS*SMLKLL
Trigger: AAGTAGTTTCAACATACTCCAGGAACTGAGAAACAA...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CCA 90 bp AAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCATGTCTAGGATTATCTaGTATAAGGACAAACCATGT +
Preference number: 4 (lower is better)
Translates to: KRDTVCSISKICLQIPFTMSRII*YKDKPC
Trigger: ACATGGTTTGTCCTTATACCAGATAATCCTAGACAT...GGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR CCA 90 bp ATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCATGGAACCATTATTCAACTATCTaGCCACTTCATTCTACTCAA +
Preference number: 4 (lower is better)
Translates to: IQYAAFPKFVFKSLLPWNHYSTI*PLHSTQ
Trigger: TTGAGTAGAATGAAGTGGCCAGATAGTTGAATAATG...GTTCCATGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS GCA 90 bp ACTGAGAACATCTTTCCCAGGCTCTCCGGCTGCCCCTCTGTGCTGTaGAGGGGACGCGCGACCATCCCGCGTCTGCTCCGGCCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: TENIFPRLSGCPSVL*RGRATIPRLLRPPL
Trigger: CAGCGGCGGCCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGATGTTCTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518981.5
ENST00000521727.5
CDS GCA 90 bp GCTGCACTGAGAACATCTTTCCCAGGCTCTCCGGCTGCCCCTCTGTaGTGTGCAGGGGACGCGCGACCATCCCGCGTCTGCTCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: AALRTSFPGSPAAPL*CAGDARPSRVCSGR
Trigger: GCGGCCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGATGTTCTCAGTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518981.5
ENST00000521727.5
CDS GCA 90 bp CACTGGGCAATGATACCTTTCCCAGGCTCTCCGGCTGCCCCTCTGTaGTGTGCAGGGGACGCGCGACCATCCCGCGTCTGCTCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: HWAMIPFPGSPAAPL*CAGDARPSRVCSGR
Trigger: GCGGCCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGGTATCATTGCCCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518767.5
CDS GCA 90 bp GCTGCCCCTCTGTGCTGTGCAGGGGACGCGCGACCATCCCGCGTCTaGTCCGGCCGCCGCTGTGCAACGCACGGTTTAGCGGATCTTGCA +
Preference number: 5 (lower is better)
Translates to: AAPLCCAGDARPSRV*SGRRCATHGLADLA
Trigger: TGCAAGATCCGCTAAACCGTGCGTTGCACAGCGGCGGCCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS GCA 90 bp TGCAGGGGACGCGCGACCATCCCGCGTCTGCTCCGGCCGCCGCTGTaGAACGCACGGTTTAGCGGATCTTGCACCTTTCTAGACGGGGGA +
Preference number: 5 (lower is better)
Translates to: CRGRATIPRLLRPPL*NARFSGSCTFLDGG
Trigger: TCCCCCGTCTAGAAAGGTGCAAGATCCGCTAAACCGTGCGTTGCACAGCGGCGGCCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS TCA 90 bp TGCGGTGGCAGCCGCGGGTTCTGGGAGCTGCTAGACGGCCGAGTTTaGTTTCTTGCAGTCCTGAGCGATGGAGCCCGGGGGTGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: CGGSRGFWELLDGRV*FLAVLSDGARGCLV
Trigger: AACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTGCCACCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS TCA 90 bp GAGGAGGTTGCTTCACCGTCTCGCCCAGCAAACACCAGGGATCCGTaGTCACCTGCTCGCCAAGACCCGCGGCGTGGCCAGACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: EEVASPSRPANTRDP*SPARQDPRRGQTSS
Trigger: AGAGGAGGTCTGGCCACGCCGCGGGTCTTGGCGAGCAGGTGATCACGGATCCCTGGTGTTTGCTGGGCGAGACGGTGAAGCAACCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS GCA 90 bp TGCTTCACCGTCTCGCCCAGCAAACACCAGGGATCCGTGATCACCTaGTCGCCAAGACCCGCGGCGTGGCCAGACCTCCTCTTCTACCGA +
Preference number: 5 (lower is better)
Translates to: CFTVSPSKHQGSVIT*SPRPAAWPDLLFYR
Trigger: TCGGTAGAAGAGGAGGTCTGGCCACGCCGCGGGTCTTGGCGAGCAGGTGATCACGGATCCCTGGTGTTTGCTGGGCGAGACGGTGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS CCA 90 bp GGCAGCCTCTTCTTGCCGGGGACACTTTGCAGACGGCTCCAACATTaGCAAACACTACAGAGAACTGACCCCGCTCGGCCGCCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GSLFLPGTLCRRLQH*QTLQRTDPARPPPA
Trigger: AGCCGGCGGCGGCCGAGCGGGGTCAGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518502.5
ENST00000524191.5
CDS GCA 90 bp CAGCCGCGGGTTCTGGGAGCTGCTAGACGGCCGAGTTTGATTTCTTaGAGTCCTGAGCGATGGAGCCCGGGGGTGCCTGGTTATTGTCCG +
Preference number: 5 (lower is better)
Translates to: QPRVLGAARRPSLIS*SPERWSPGVPGYCP
Trigger: CGGACAATAACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS CCA 90 bp GAGAACATCTTCTTGCCGGGGACACTTTGCAGACGGCTCCAACATTaGCAAACACTACAGAGAACTGACCCCGCTCGGCCGCCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: ENIFLPGTLCRRLQH*QTLQRTDPARPPPA
Trigger: AGCCGGCGGCGGCCGAGCGGGGTCAGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGATGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517542.5
CDS CCA 90 bp AATGATACCTTCTTGCCGGGGACACTTTGCAGACGGCTCCAACATTaGCAAACACTACAGAGAACTGACCCCGCTCGGCCGCCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: NDTFLPGTLCRRLQH*QTLQRTDPARPPPA
Trigger: AGCCGGCGGCGGCCGAGCGGGGTCAGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGGTATCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521451.5
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTG +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGALAGDT*QTAPTL
Trigger: CAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAG...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGTAGGCAGCCTCTTCTaGCCGGGGACACTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAVGSLF*PGTLCR
Trigger: TCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCCTAC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGGGGGTGCCTGGTTATaGTCCGCTTTCTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAGGAWL*SAFSLR
Trigger: TCTGAGAGAGAAAGCGGACAATAACCAGGCACCCCC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS CCA 90 bp GGAGCTGCTAGACGGCCGAGTTTGATTTCTTGCAGTCCTGAGCGATaGAGCCCGGGGGTGCCTGGTTATTGTCCGCTTTCTCTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: GAARRPSLISCSPER*SPGVPGYCPLSLSD
Trigger: ATCTGAGAGAGAAAGCGGACAATAACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTGGGGGTGCCTGGTTATaGTCCGCTTTCTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAIGGAWL*SAFSLR
Trigger: TCTGAGAGAGAAAGCGGACAATAACCAGGCACCCCC...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTAGACGGCCGAGTTaGATTTCTTGCAGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGARRPS*ISCSPE
Trigger: CTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGC...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGCTAGACGGCCGAGTTaGATTTCTTGCAGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAARRPS*ISCSPE
Trigger: CTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGGCAATGATACCTTCTaGCCGGGGACACTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGGNDTF*PGTLCR
Trigger: TCTGCAAAGTGTCCCCGGCAAGAAGGTATCATTGCC...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523558.5
CDS GCA 90 bp GCTAAAGTCCTTGTGGTAGGCAGCCTCTTCTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGGCAAACACTACAGAGAACTGACCCC +
Preference number: 5 (lower is better)
Translates to: AKVLVVGSLFLPGTL*RRLQHWQTLQRTDP
Trigger: GGGGTCAGTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCCTACCACAAGGACTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518502.5
ENST00000524191.5
CDS-3UTR CAA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCCAGACGGCTCCAACATaGGCAAACACTACAGAGAAC +
Preference number: 5 (lower is better)
Translates to: NTLDANREWLQHTDGGGRQTAPT*ANTTEN
Trigger: GTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTG...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524300.6
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGCTTTCATTGCAGCATaGTGTCTAGCAGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAAFIAA*CLAACR
Trigger: TCGACAAGCTGCTAGACACAATGCTGCAATGAAAGC...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTTCATTGCTCCATCGATaGGATCCAGTCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGASLLHR*DPVLVQ
Trigger: CTGAACAAGGACTGGATCCAATCGATGGAGCAATGA...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGGGGGTGCCTGGTTATaGTCCGCTTTCTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERGGAWL*SAFSLR
Trigger: TCTGAGAGAGAAAGCGGACAATAACCAGGCACCCCC...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAAAGACGCCCCCTTACTaGCTAAGAGTATATGGAGCT +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGKTPPY*LRVYGA
Trigger: AGCTCCATATACTCTTAGCAAGTAAGGGGGCGTCTT...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGCTAGACGGCCGAGTTaGATTTCTTGCAGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERARRPS*ISCSPE
Trigger: CTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGC...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp GGAGATTCTGCTCACTGCTTAGCTGCAGGTAGTGGTCCATCAATGACAGAGTATCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTG +
Preference number: 5 (lower is better)
Translates to: GDSAHCLAAGSGPSMTEYLAGDT*QTAPTL
Trigger: CAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAG...ATACTCTGTCATTGATGGACCACTACCTGCAGCTAAGCAGTGAGCAGAATCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CAA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTGCTTTCATTGCAGCATaGTGTCTAGCAGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERAFIAA*CLAACR
Trigger: TCGACAAGCTGCTAGACACAATGCTGCAATGAAAGC...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp TGCATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCCAGGTCACACACTCTTaGCCACTTTGTCTATCACAG +
Preference number: 5 (lower is better)
Translates to: CMCAHSFHFDGLPFPSWAQVTHS*PLCLSQ
Trigger: CTGTGATAGACAAAGTGGCAAAGAGTGTGTGACCTG...GGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACTTTTTCGATATTCATaGCTCCATCGATTGGATCCA +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGLFRYS*LHRLDP
Trigger: TGGATCCAATCGATGGAGCAATGAATATCGAAAAAG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTCCCTTTTTCGATATTCATaGCTCCATCGATTGGATCCA +
Preference number: 5 (lower is better)
Translates to: LDANREWLQHTDGGGRDSLFRYS*LHRLDP
Trigger: TGGATCCAATCGATGGAGCAATGAATATCGAAAAAG...GGAATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGATCTCAGATGCTTGGCTaGTTTTTCAAGAGAACCTTT +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGSQMLG*FFKRTF
Trigger: AAAGGTTCTCTTGAAAAACAAGCCAAGCATCTGAGA...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAGCTTTCTCTCTCAGATGCTaGGCTTGTTTTTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: MRADRFIRMRWQPRVLGAFSLRC*ACFSRE
Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGAA...AGCTCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGAAGTTCCTGGAGTATGTaGAAACTACTTGCTCTTAAC +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGSSWSM*KLLALN
Trigger: GTTAAGAGCAAGTAGTTTCAACATACTCCAGGAACT...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ACATTTTTACTGCATCTGCTCCACGCTGGATTCCAACATGCTGGCCCGGAGCGTAAGACGCCCCCTTACTaGCTAAGAGTATATGGAGCT +
Preference number: 5 (lower is better)
Translates to: TFLLHLLHAGFQHAGPERKTPPY*LRVYGA
Trigger: AGCTCCATATACTCTTAGCAAGTAAGGGGGCGTCTT...ACGCTCCGGGCCAGCATGTTGGAATCCAGCGTGGAGCAGATGCAGTAAAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCATGCGTGCTGACAGGTTTATAAGGATGCGGTGGCAGCCGCGGGTTCTGGGACGTGTTAGAATAGTGTaGTCTTCACATAAGACTCAA +
Preference number: 5 (lower is better)
Translates to: LMRADRFIRMRWQPRVLGRVRIV*SSHKTQ
Trigger: TTGAGTCTTATGTGAAGACAACACTATTCTAACACG...TCCCAGAACCCGCGGCTGCCACCGCATCCTTATAAACCTGTCAGCACGCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTCACAATTGCTTTGTTTaGTTTCTCAGTTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLMQTVSGYNTRMGVGAIHNCFV*FLSSWS
Trigger: ACTCCAGGAACTGAGAAACAAAACAAAGCAATTGTG...AATCGCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCGGGGCGGGGAGGAGGTaGCTTCACCGTCTCGCCCAG +
Preference number: 5 (lower is better)
Translates to: IETIYMFFYQVNIPERVTGAGRR*LHRLAQ
Trigger: CTGGGCGAGACGGTGAAGCAACCTCCTCCCCGCCCC...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000521727.5
CDS GCA 90 bp TCATGGCTGGCTTCAATGGAGCTTCCAATAGCATGGAAAGTCATCTaGACAGGGGCTAATGTCAGACAGGTCACACACTCTTTGCCACTT +
Preference number: 5 (lower is better)
Translates to: SWLASMELPIAWKVI*TGANVRQVTHSLPL
Trigger: AAGTGGCAAAGAGTGTGTGACCTGTCTGACATTAGCCCCTGTGCAGATGACTTTCCATGCTATTGGAAGCTCCATTGAAGCCAGCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000523533.5
CDS CCA 90 bp TGGCCTTCCATTTCCGAGCTGGGCCATAACACAGCAAAATGGCAGTaGCATATTATACCTGATCATGGCTGGCTTCAATGGAGCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WPSISELGHNTAKWQ*HIIPDHGWLQWSFQ
Trigger: TTGGAAGCTCCATTGAAGCCAGCCATGATCAGGTATAATATGCCACTGCCATTTTGCTGTGTTATGGCCCAGCTCGGAAATGGAAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTG +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACLAGDT*QTAPTL
Trigger: CAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAG...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCGTAGGCAGCCTCTTCTaGCCGGGGACACTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACVGSLF*PGTLCR
Trigger: TCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCCTAC...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AACACTCTTGATGCAAACCGTGAGTGGCTACAACACACGGATGGGGGTGGGCGCGATTGGATCCAGTCCTaGTTCAGAAAATTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: NTLDANREWLQHTDGGGRDWIQS*FRKLFQ
Trigger: TTGAAACAATTTTCTGAACAAGGACTGGATCCAATC...GCGCCCACCCCCATCCGTGTGTTGTAGCCACTCACGGTTTGCATCAAGAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp TGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTGGGCCATAACACACATAGCTTCCATTTaGATGGCCTTCCATTTCCGA +
Preference number: 5 (lower is better)
Translates to: CAHSFHFDGLPFPSWAITHIASI*MAFHFR
Trigger: TCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTG...TGTTATGGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS GCA 90 bp AAGTCATCTGCACAGGGGCTAATGTCAGACAGGTCACACACTCTTTaGCACTTTGTCTATCACAGTAGTGAACCTGAAAGCCTTGAATCC +
Preference number: 5 (lower is better)
Translates to: KSSAQGLMSDRSHTL*HFVYHSSEPESLES
Trigger: GGATTCAAGGCTTTCAGGTTCACTACTGTGATAGACAAAGTGGCAAAGAGTGTGTGACCTGTCTGACATTAGCCCCTGTGCAGATGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000523533.5
CDS CCA 90 bp ATGTGCGCACATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTaGGCCATAACACAGCAAAATGGCAGTGGCATATTATACCTGATC +
Preference number: 5 (lower is better)
Translates to: MCAHSFHFDGLPFPS*AITQQNGSGILYLI
Trigger: GATCAGGTATAATATGCCACTGCCATTTTGCTGTGTTATGGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATGTGCGCACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCCAGACGGCTCCAACATaGGCAAACACTACAGAGAAC +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACQTAPT*ANTTEN
Trigger: GTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTG...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTG +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHLAGDT*QTAPTL
Trigger: CAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000521210.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CCTTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTGTAGGCAGCCTCTTCTaGCCGGGGACACTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PLGVFKRDTVCSISKICLVGSLF*PGTLCR
Trigger: TCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCCTAC...AAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp GAAGAAAAACTTCCACATTCAAAAGAAAGACTAAACCATGCACAAATGAACCCTGCAGAGATCGCGCCATaGCACTCCAGCCTAGGTGAC +
Preference number: 5 (lower is better)
Translates to: EEKLPHSKERLNHAQMNPAEIAP*HSSLGD
Trigger: GTCACCTAGGCTGGAGTGCAATGGCGCGATCTCTGC...AGGGTTCATTTGTGCATGGTTTAGTCTTTCTTTTGAATGTGGAAGTTTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR CAA 90 bp TTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAACTTGCCGGGGACACTTaGCAGACGGCTCCAACATTG +
Preference number: 5 (lower is better)
Translates to: LGVFKRDTVCSISKICLQLAGDT*QTAPTL
Trigger: CAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAG...TTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CAA 90 bp ATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCATGGAACCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTG +
Preference number: 5 (lower is better)
Translates to: IQYAAFPKFVFKSLLPWNLAGDT*QTAPTL
Trigger: CAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAG...GTTCCATGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CAA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTGTAGGCAGCCTCTTCTaGCCGGGGACACTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSVGSLF*PGTLCR
Trigger: TCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCCTAC...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CAA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCGCTTTCATTGCAGCATaGTGTCTAGCAGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACAFIAA*CLAACR
Trigger: TCGACAAGCTGCTAGACACAATGCTGCAATGAAAGC...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTCATTGCTCCATCGATaGGATCCAGTCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACSLLHR*DPVLVQ
Trigger: CTGAACAAGGACTGGATCCAATCGATGGAGCAATGA...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTAATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTGGCTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTTCTCAGATGCTTGGCTaGTTTTTCAAGAGAACCTTT +
Preference number: 5 (lower is better)
Translates to: LAGSNSNRFFPSPSCTLFSQMLG*FFKRTF
Trigger: AAAGGTTCTCTTGAAAAACAAGCCAAGCATCTGAGA...AAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGGGGGTGCCTGGTTATaGTCCGCTTTCTCTCTCAGA +
Preference number: 5 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHGGAWL*SAFSLR
Trigger: TCTGAGAGAGAAAGCGGACAATAACCAGGCACCCCC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCTAGACGGCCGAGTTaGATTTCTTGCAGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHARRPS*ISCSPE
Trigger: CTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGC...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp TTAATTAGTCCACATAAAGTCTGGGCATCAGAATTTTTAAAGCTGCCCAGGAAACAGACGGCTCCAACATaGGCAAACACTACAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LISPHKVWASEFLKLPRKQTAPT*ANTTEN
Trigger: GTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTG...TTTCCTGGGCAGCTTTAAAAATTCTGATGCCCAGACTTTATGTGGACTAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CAA 90 bp ATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCATGGAACGGCTCCAAAAACTTCTaGCCGGGGACACTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: IQYAAFPKFVFKSLLPWNGSKNF*PGTLCR
Trigger: TCTGCAAAGTGTCCCCGGCAAGAAGTTTTTGGAGCC...GTTCCATGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CAA 90 bp CTTAAATCAAATTGCAATGGGCAAGGAAAGCCAAAGAAGGGTTTACACAATATTCAGACGGCTCCAACATaGGCAAACACTACAGAGAAC +
Preference number: 5 (lower is better)
Translates to: LKSNCNGQGKPKKGLHNIQTAPT*ANTTEN
Trigger: GTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTG...AATATTGTGTAAACCCTTCTTTGGCTTTCCTTGCCCATTGCAATTTGATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355780.9
CDS-3UTR CAA 90 bp CAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCAGACGGCTCCAACATaGGCAAACACTACAGAGAAC +
Preference number: 5 (lower is better)
Translates to: QERYSMQHFQNLSSNPFYQTAPT*ANTTEN
Trigger: GTTCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTG...GTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000524104.5
CDS-3UTR CAA 90 bp ATAGAAACAATCTACATGTTTTTCTACCAGGTAAATATACCTGAGAGGGTTACCATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: IETIYMFFYQVNIPERVTIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...GGTAACCCTCTCAGGTATATTTACCTGGTAGAAAAACATGTAGATTGTTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CAA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR CAA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: SELECNLCFVSIRMQCYSIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CAA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTATTGTGTCTAGCAGCTaGTCGAGTCTTTCCTTCCCC +
Preference number: 5 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIIVSSS*SSLSFP
Trigger: GGGGAAGGAAAGACTCGACAAGCTGCTAGACACAAT...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCAGGTCACACACTCTTaGCCACTTTGTCTATCACAG +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHQVTHS*PLCLSQ
Trigger: CTGTGATAGACAAAGTGGCAAAGAGTGTGTGACCTG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521210.5
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATTCATTGCTCCATCGATaGGATCCAGTCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHSLLHR*DPVLVQ
Trigger: CTGAACAAGGACTGGATCCAATCGATGGAGCAATGA...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCTCTCAGATGCTTGGCTaGTTTTTCAAGAGAACCTTT +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACSQMLG*FFKRTF
Trigger: AAAGGTTCTCTTGAAAAACAAGCCAAGCATCTGAGA...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp TCTTCATCTGTTTCTTGGACTTCACCTTTCATTCCCTGCCTTAAGAAGCTAATGCTCTTCATCTGTTTCTaGGACTTCACCTTTCATTCC +
Preference number: 5 (lower is better)
Translates to: SSSVSWTSPFIPCLKKLMLFICF*DFTFHS
Trigger: GGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGAG...CATTAGCTTCTTAAGGCAGGGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCAGTTCCTGGAGTATGTaGAAACTACTTGCTCTTAAC +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACSSWSM*KLLALN
Trigger: GTTAAGAGCAAGTAGTTTCAACATACTCCAGGAACT...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTGCCACAATTGCTTTGTTTaGTTTCTCAGTTCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: QIMVLVIHFPEHRHPHACHNCFV*FLSSWS
Trigger: ACTCCAGGAACTGAGAAACAAAACAAAGCAATTGTG...GCACGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTGCTTTCATTGCAGCATaGTGTCTAGCAGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSAFIAA*CLAACR
Trigger: TCGACAAGCTGCTAGACACAATGCTGCAATGAAAGC...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR CAA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTGCTTTCATTGCAGCATaGTGTCTAGCAGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: SELECNLCFVSIRMQCYSAFIAA*CLAACR
Trigger: TCGACAAGCTGCTAGACACAATGCTGCAATGAAAGC...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CAA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGCTTTCATTGCAGCATaGTGTCTAGCAGCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHAFIAA*CLAACR
Trigger: TCGACAAGCTGCTAGACACAATGCTGCAATGAAAGC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACTCATTGCTCCATCGATaGGATCCAGTCCTTGTTCAG +
Preference number: 5 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHSLLHR*DPVLVQ
Trigger: CTGAACAAGGACTGGATCCAATCGATGGAGCAATGA...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGTTCTCTCTCAGATGCTaGGCTTGTTTTTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHAFSLRC*ACFSRE
Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGAA...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTCCCAGTGAAACAGAATaGTTGGTACTATCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSPSETE*LVLSEA
Trigger: TGCCTCAGATAGTACCAACAATTCTGTTTCACTGGG...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR CAA 90 bp TCAGAGCTTGAATGCAATTTGTGCTTTGTTTCTATAAGAATGCAGTGTTACTCTCCCAGTGAAACAGAATaGTTGGTACTATCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: SELECNLCFVSIRMQCYSPSETE*LVLSEA
Trigger: TGCCTCAGATAGTACCAACAATTCTGTTTCACTGGG...AGAGTAACACTGCATTCTTATAGAAACAAAGCACAAATTGCATTCAAGCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355780.9
ENST00000519961.5
ENST00000521727.5
CDS-3UTR CAA 90 bp ACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGCGCGTGTTAGAATAGTGTaGTCTTCACATAAGACTCAA +
Preference number: 5 (lower is better)
Translates to: TQIMVLVIHFPEHRHPHARVRIV*SSHKTQ
Trigger: TTGAGTCTTATGTGAAGACAACACTATTCTAACACG...CGCATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CTGGAAGCAACTCCAACAGGTTTTTCCCTTCCCCGTCATGTACATTATTTATTTCGTGTTAGAATAGTGTaGTCTTCACATAAGACTCAA +
Preference number: 5 (lower is better)
Translates to: LEATPTGFSLPRHVHYLFRVRIV*SSHKTQ
Trigger: TTGAGTCTTATGTGAAGACAACACTATTCTAACACG...AAATAAATAATGTACATGACGGGGAAGGGAAAAACCTGTTGGAGTTGCTTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTATTCCACAGCACATCATaGGTTCATTTTCGAATTGTC +
Preference number: 5 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVFHSTS*VHFRIV
Trigger: GACAATTCGAAAATGAACCAATGATGTGCTGTGGAA...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTAGATTGGATCCAGTCCTaGTTCAGAAAATTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVDWIQS*FRKLFQ
Trigger: TTGAAACAATTTTCTGAACAAGGACTGGATCCAATC...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATCTTTTTCGATATTCATaGCTCCATCGATTGGATCCA +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHLFRYS*LHRLDP
Trigger: TGGATCCAATCGATGGAGCAATGAATATCGAAAAAG...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATTCTCAGATGCTTGGCTaGTTTTTCAAGAGAACCTTT +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHSQMLG*FFKRTF
Trigger: AAAGGTTCTCTTGAAAAACAAGCCAAGCATCTGAGA...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATTTCTCTCTCAGATGCTaGGCTTGTTTTTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHFSLRC*ACFSRE
Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGAA...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AACCATCACATTCCACAGCACATCATTGGTTCATTTTCGAATTGTCAAGCAGTACGTGTTAGAATAGTGTaGTCTTCACATAAGACTCAA +
Preference number: 5 (lower is better)
Translates to: NHHIPQHIIGSFSNCQAVRVRIV*SSHKTQ
Trigger: TTGAGTCTTATGTGAAGACAACACTATTCTAACACG...TACTGCTTGACAATTCGAAAATGAACCAATGATGTGCTGTGGAATGTGATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CCTTTAGGAGTCTTCAAGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTGTAATGTGTTTTGGGTaGTGGGGACCAGTATTTAAA +
Preference number: 5 (lower is better)
Translates to: PLGVFKRDTVCSISKICLVMCFG*WGPVFK
Trigger: TTTAAATACTGGTCCCCACAACCCAAAACACATTAC...AAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCTTGAAGACTCCTAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR CAA 90 bp AAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACCCTCATGATTGGATCCAGTCCTaGTTCAGAAAATTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: KTQIMVLVIHFPEHRHPHDWIQS*FRKLFQ
Trigger: TTGAAACAATTTTCTGAACAAGGACTGGATCCAATC...ATGAGGGTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTCTTTTTCGATATTCATaGCTCCATCGATTGGATCCA +
Preference number: 5 (lower is better)
Translates to: QMSYDLISSSKGNAQSFILFRYS*LHRLDP
Trigger: TGGATCCAATCGATGGAGCAATGAATATCGAAAAAG...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTTTCTCTCTCAGATGCTaGGCTTGTTTTTCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIFSLRC*ACFSRE
Trigger: TTCTCTTGAAAAACAAGCCAAGCATCTGAGAGAGAA...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS-3UTR CAA 90 bp CAAATGAGTTATGATCTGATCTCGAGTTCCAAGGGAAATGCTCAAAGTTTTATTTTCCACAGCACATCATaGGTTCATTTTCGAATTGTC +
Preference number: 5 (lower is better)
Translates to: QMSYDLISSSKGNAQSFIFHSTS*VHFRIV
Trigger: GACAATTCGAAAATGAACCAATGATGTGCTGTGGAA...AATAAAACTTTGAGCATTTCCCTTGGAACTCGAGATCAGATCATAACTCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000522695.5
ENST00000524300.6
CDS-3UTR CAA 90 bp AGAGAGATACAGTATGCAGCATTTCCAAAATTTGTCTTCAAATCCCTTTTACCACCTGCTACTCTTACTTaGCCCCAAATTCAAACAATA +
Preference number: 5 (lower is better)
Translates to: REIQYAAFPKFVFKSLLPPATLT*PQIQTI
Trigger: TATTGTTTGAATTTGGGGCAAAGTAAGAGTAGCAGG...TGGTAAAAGGGATTTGAAGACAAATTTTGGAAATGCTGCATACTGTATCTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524104.5
CDS-3UTR CAA 90 bp GAAAGCCAAAGAAGGGTTTACACAATATTCAATAAGCAACAGTATCTGTTCAGTTCACAATACACAGATTaGGAAACATATAACGTGTCC +
Preference number: 5 (lower is better)
Translates to: ESQRRVYTIFNKQQYLFSSQYTD*ETYNVS
Trigger: GGACACGTTATATGTTTCCAAATCTGTGTATTGTGA...ACTGAACAGATACTGTTGCTTATTGAATATTGTGTAAACCCTTCTTTGGCTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355780.9
ENST00000519961.5
CDS-3UTR CAA 90 bp TCACATAAGACTCAAATAATGGTATTAGTCATTCATTTCCCTGAACACAGACACGATTGGATCCAGTCCTaGTTCAGAAAATTGTTTCAA +
Preference number: 5 (lower is better)
Translates to: SHKTQIMVLVIHFPEHRHDWIQS*FRKLFQ
Trigger: TTGAAACAATTTTCTGAACAAGGACTGGATCCAATC...GTGTCTGTGTTCAGGGAAATGAATGACTAATACCATTATTTGAGTCTTATGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000523558.5
ENST00000524300.6
CDS GCA 72 bp CTGTGCTGTGCAGGGGACGCGCGACCATCCCGCGTCTaGTCCGGCCGCCGCTGTGCAACGCACGGTTTAGCG +
Preference number: 6 (lower is better)
Translates to: LCCAGDARPSRV*SGRRCATHGLA
Trigger: CGCTAAACCGTGCGTTGCACAGCGGCGGCCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS GCA 72 bp CTCTTTCCCAGGCTCTCCGGCTGCCCCTCTGTGCTGTaGAGGGGACGCGCGACCATCCCGCGTCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: LFPRLSGCPSVL*RGRATIPRLLR
Trigger: CCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520872.5
CDS GCA 72 bp ATCTTTCCCAGGCTCTCCGGCTGCCCCTCTGTGCTGTaGAGGGGACGCGCGACCATCCCGCGTCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: IFPRLSGCPSVL*RGRATIPRLLR
Trigger: CCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000518981.5
ENST00000521727.5
CDS GCA 72 bp AACTTTCCCAGGCTCTCCGGCTGCCCCTCTGTGCTGTaGAGGGGACGCGCGACCATCCCGCGTCTGCTCCGG +
Preference number: 6 (lower is better)
Translates to: NFPRLSGCPSVL*RGRATIPRLLR
Trigger: CCGGAGCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522509.5
CDS GCA 72 bp ATGATACCTTTCCCAGGCTCTCCGGCTGCCCCTCTGTaGTGTGCAGGGGACGCGCGACCATCCCGCGTCTGC +
Preference number: 6 (lower is better)
Translates to: MIPFPGSPAAPL*CAGDARPSRVC
Trigger: GCAGACGCGGGATGGTCGCGCGTCCCCTGCACAGCACAGAGGGGCAGCCGGAGAGCCTGGGAAAGGTATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518767.5
CDS GCA 72 bp GTCTCGCCCAGCAAACACCAGGGATCCGTGATCACCTaGTCGCCAAGACCCGCGGCGTGGCCAGACCTCCTC +
Preference number: 6 (lower is better)
Translates to: VSPSKHQGSVIT*SPRPAAWPDLL
Trigger: GAGGAGGTCTGGCCACGCCGCGGGTCTTGGCGAGCAGGTGATCACGGATCCCTGGTGTTTGCTGGGCGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS GCA 72 bp CGCGCGACCATCCCGCGTCTGCTCCGGCCGCCGCTGTaGAACGCACGGTTTAGCGGATCTTGCACCTTTCTA +
Preference number: 6 (lower is better)
Translates to: RATIPRLLRPPL*NARFSGSCTFL
Trigger: TAGAAAGGTGCAAGATCCGCTAAACCGTGCGTTGCACAGCGGCGGCCGGAGCAGACGCGGGATGGTCGCGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521727.5
ENST00000522509.5
CDS CAA 90 bp ATGCGGTGGCAGCCGCGGGTTCTGGGAGCTGCTAGACGGCCGAGTTaGATTTCTTGCAGTCCTGAGCGATGGAGCCCGGGGGTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: MRWQPRVLGAARRPS*ISCSPERWSPGVPG
Trigger: ACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTGCCACCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS TCA 72 bp AGCCGCGGGTTCTGGGAGCTGCTAGACGGCCGAGTTTaGTTTCTTGCAGTCCTGAGCGATGGAGCCCGGGGG +
Preference number: 6 (lower is better)
Translates to: SRGFWELLDGRV*FLAVLSDGARG
Trigger: CCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS CAA 72 bp CAGCCGCGGGTTCTGGGAGCTGCTAGACGGCCGAGTTaGATTTCTTGCAGTCCTGAGCGATGGAGCCCGGGG +
Preference number: 6 (lower is better)
Translates to: QPRVLGAARRPS*ISCSPERWSPG
Trigger: CCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCCCAGAACCCGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS GCA 72 bp GTTCTGGGAGCTGCTAGACGGCCGAGTTTGATTTCTTaGAGTCCTGAGCGATGGAGCCCGGGGGTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: VLGAARRPSLIS*SPERWSPGVPG
Trigger: ACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCTAGCAGCTCCCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS CCA 72 bp AGACGGCCGAGTTTGATTTCTTGCAGTCCTGAGCGATaGAGCCCGGGGGTGCCTGGTTATTGTCCGCTTTCT +
Preference number: 6 (lower is better)
Translates to: RRPSLISCSPER*SPGVPGYCPLS
Trigger: AGAAAGCGGACAATAACCAGGCACCCCCGGGCTCCATCGCTCAGGACTGCAAGAAATCAAACTCGGCCGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS GCA 72 bp CTTGTGGTAGGCAGCCTCTTCTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGGCAAACACTACAGAGA +
Preference number: 6 (lower is better)
Translates to: LVVGSLFLPGTL*RRLQHWQTLQR
Trigger: TCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGAGGCTGCCTACCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000355780.9
ENST00000518502.5
ENST00000520945.5
ENST00000521210.5
ENST00000521845.5
ENST00000522061.5
ENST00000524104.5
ENST00000524113.5
ENST00000524191.5
ENST00000524300.6
CDS CAA 72 bp CCCTCACGGCTCCAAAAACTTCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTGGCAAACACTACAGAG +
Preference number: 6 (lower is better)
Translates to: PSRLQKLLAGDT*QTAPTLANTTE
Trigger: CTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGTTTTTGGAGCCGTGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000521447.5
CDS GCA 72 bp CCTCACGGCTCCAAAAACTTCTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGGCAAACACTACAGAGA +
Preference number: 6 (lower is better)
Translates to: PHGSKNFLPGTL*RRLQHWQTLQR
Trigger: TCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGTTTTTGGAGCCGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521419.5
ENST00000521447.5
CDS GCA 72 bp GCACTGGGCAATGATACCTTCTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGGCAAACACTACAGAGA +
Preference number: 6 (lower is better)
Translates to: ALGNDTFLPGTL*RRLQHWQTLQR
Trigger: TCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGGTATCATTGCCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521451.5
ENST00000523558.5
CDS GCA 72 bp ACACGGCAAAATCGTCTCTTCTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGGCAAACACTACAGAGA +
Preference number: 6 (lower is better)
Translates to: TRQNRLFLPGTL*RRLQHWQTLQR
Trigger: TCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGAGACGATTTTGCCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519818.5
ENST00000521736.5
CDS GCA 72 bp AGCTGCACTGAGAACATCTTCTTGCCGGGGACACTTTaGAGACGGCTCCAACATTGGCAAACACTACAGAGA +
Preference number: 6 (lower is better)
Translates to: SCTENIFLPGTL*RRLQHWQTLQR
Trigger: TCTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGATGTTCTCAGTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517542.5
ENST00000521293.5
CDS CAA 72 bp AACACGGCAAAATCGTCTCTTCTTGCCGGGGACACTTaGCAGACGGCTCCAACATTGGCAAACACTACAGAG +
Preference number: 6 (lower is better)
Translates to: NTAKSSLLAGDT*QTAPTLANTTE
Trigger: CTCTGTAGTGTTTGCCAATGTTGGAGCCGTCTGCAAAGTGTCCCCGGCAAGAAGAGACGATTTTGCCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519818.5
ENST00000521736.5
CDS TCA 72 bp GGTGATTGGGAACATTCTGTATCTCGATCTGAGTGGTaGTCACGTGAGGCTCTGATTGTACATGCCCCGAAA +
Preference number: 6 (lower is better)
Translates to: GDWEHSVSRSEW*SREALIVHAPK
Trigger: TTTCGGGGCATGTACAATCAGAGCCTCACGTGATCACCACTCAGATCGAGATACAGAATGTTCCCAATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524191.5
CDS GCA 72 bp GCACAGGGGCTAATGTCAGACAGGTCACACACTCTTTaGCACTTTGTCTATCACAGTAGTGAACCTGAAAGC +
Preference number: 6 (lower is better)
Translates to: AQGLMSDRSHTL*HFVYHSSEPES
Trigger: GCTTTCAGGTTCACTACTGTGATAGACAAAGTGGCAAAGAGTGTGTGACCTGTCTGACATTAGCCCCTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000523533.5
CDS GCA 72 bp GCTTCAATGGAGCTTCCAATAGCATGGAAAGTCATCTaGACAGGGGCTAATGTCAGACAGGTCACACACTCT +
Preference number: 6 (lower is better)
Translates to: ASMELPIAWKVI*TGANVRQVTHS
Trigger: AGAGTGTGTGACCTGTCTGACATTAGCCCCTGTGCAGATGACTTTCCATGCTATTGGAAGCTCCATTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521210.5
ENST00000523533.5
CDS CCA 72 bp CCTTCCATTTCCGAGCTGGGCCATAACACAGCAAAATaGCAGTGGCATATTATACCTGATCATGGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PSISELGHNTAK*QWHIIPDHGWL
Trigger: AAGCCAGCCATGATCAGGTATAATATGCCACTGCCATTTTGCTGTGTTATGGCCCAGCTCGGAAATGGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS CCA 72 bp CATAGCTTCCATTTTGATGGCCTTCCATTTCCGAGCTaGGCCATAACACAGCAAAATGGCAGTGGCATATTA +
Preference number: 6 (lower is better)
Translates to: HSFHFDGLPFPS*AITQQNGSGIL
Trigger: TAATATGCCACTGCCATTTTGCTGTGTTATGGCCCAGCTCGGAAATGGAAGGCCATCAAAATGGAAGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523533.5
CDS CCA 72 bp ATTAATCTGGGTTCTGACAAGGAAAAGACATCTCCTTaGATCTTTGGCTCCAGAGTCCCTGTAATCCATTCA +
Preference number: 6 (lower is better)
Translates to: INLGSDKEKTSP*IFGSRVPVIHS
Trigger: TGAATGGATTACAGGGACTCTGGAGCCAAAGATCCAAGGAGATGTCTTTTCCTTGTCAGAACCCAGATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS GCA 72 bp TCTTCATCTGTTTCTTGGACTTCACCTTTCATTCCCTaGCTTAAGAAGCTAATGATTAATCTGGGTTCTGAC +
Preference number: 6 (lower is better)
Translates to: SSSVSWTSPFIP*LKKLMINLGSD
Trigger: GTCAGAACCCAGATTAATCATTAGCTTCTTAAGGCAGGGAATGAAAGGTGAAGTCCAAGAAACAGATGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521419.5
CDS CCA 72 bp AAGAGAACCTTTTTCGATATTCATTGCTCCATCGATTaGATCCAGTCCTTGTTCAGAAAATTGTTTCAAGGC +
Preference number: 6 (lower is better)
Translates to: KRTFFDIHCSID*IQSLFRKLFQG
Trigger: GCCTTGAAACAATTTTCTGAACAAGGACTGGATCCAATCGATGGAGCAATGAATATCGAAAAAGGTTCTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS CAA 72 bp CAAGAGAACCTTTTTCGATATTCATTGCTCCATCGATaGGATCCAGTCCTTGTTCAGAAAATTGTTTCAAGG +
Preference number: 6 (lower is better)
Translates to: QENLFRYSLLHR*DPVLVQKIVSR
Trigger: CCTTGAAACAATTTTCTGAACAAGGACTGGATCCAATCGATGGAGCAATGAATATCGAAAAAGGTTCTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS CAA 72 bp TGGCTTGTTTTTCAAGAGAACCTTTTTCGATATTCATaGCTCCATCGATTGGATCCAGTCCTTGTTCAGAAA +
Preference number: 6 (lower is better)
Translates to: WLVFQENLFRYS*LHRLDPVLVQK
Trigger: TTTCTGAACAAGGACTGGATCCAATCGATGGAGCAATGAATATCGAAAAAGGTTCTCTTGAAAAACAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000521210.5
ENST00000522695.5
ENST00000522818.1
ENST00000523558.5
ENST00000524300.6
CDS TCA 72 bp ATTTCATCAACACCAGACTTGTTCTACAAGAAATCCTaGAGGGAGTTCTTCAATCTGATTTATTTGAAGCAT +
Preference number: 6 (lower is better)
Translates to: ISSTPDLFYKKS*REFFNLIYLKH
Trigger: ATGCTTCAAATAAATCAGATTGAAGAACTCCCTTCAGGATTTCTTGTAGAACAAGTCTGGTGTTGATGAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521419.5