RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAU1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124214

Ensembl transcript IDs: ENST00000340954.11, ENST00000347458.9, ENST00000360426.8, ENST00000371792.5, ENST00000371802.5, ENST00000371828.7, ENST00000371856.7, ENST00000437404.2, ENST00000456866.2

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCCCAGGGTGTGGATCTaGTGGTGTCCCGGGAGAACC +
Preference number: 2 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQPRVWI*WCPGRT
Trigger: GGTTCTCCCGGGACACCAGCAGATCCACACCCTGGG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
3UTR-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCTGAGTGAGCCAGCTTaGGAAGGGGTCGTGCCGTTT +
Preference number: 2 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQLSEPA*EGVVPF
Trigger: AAACGGCACGACCCCTTCTCAAGCTGGCTCACTCAG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
3UTR-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGACAGGCAGCTGCTATTaGGTAGGGACCGCCAGGTCA +
Preference number: 2 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQTGSCY*VGTARS
Trigger: TGACCTGGCGGTCCCTACGCAATAGCAGCTGCCTGT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
3UTR-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCACAGGCAGCTGCTATaGCGTAGGGACCGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQHRQLL*RRDRQV
Trigger: GACCTGGCGGTCCCTACGCAATAGCAGCTGCCTGTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
3UTR-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGCCACAGCCGCCTCCTaGTGTTTCTGTTGTCTTCCC +
Preference number: 3 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQATAAS*CFCCLP
Trigger: GGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCGCCGGCGCAAACGCTaGAGAGCCGCTCAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRRRKR*RAAQAP
Trigger: GGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGCGGTCCTGGGCGGTaGCGGCGAGGAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGGPGR*RRGGEG
Trigger: TCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCGCCGGCGCAAACGCTaGAGAGCCGCTCAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRRRKR*RAAQAP
Trigger: GGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGCGGTCCTGGGCGGTaGCGGCGAGGAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGGPGR*RRGGEG
Trigger: TCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGAGGCCTCGCTCTGTaGGGAGCGTGTACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGGLAL*GACTLA
Trigger: AGCCAGAGTACACGCTCCTCACAGAGCGAGGCCTCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCCAGGGTGTGGATCTaGTGGTGTCCCGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPRVWI*WCPGRT
Trigger: GGTTCTCCCGGGACACCAGCAGATCCACACCCTGGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGATGCTTTCTGGCTGCTaGTCCGAGCTCGTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPMLSGC*SELVPR
Trigger: CCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCAT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000347458.9
ENST00000371792.5
ENST00000371802.5
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGTTCTTCATGTGGGGTaGGCCACTCTCCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPVLHVG*ATLPGH
Trigger: GTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAAC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGCGGGTTTGGTGGGCTaGGCCTGCGGGACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPAGLVG*ACGTLK
Trigger: TTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCGGCTGTGGGCGAGGTaGCCCCATACAACAACTCTC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRLWAR*PHTTTL
Trigger: GAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGATAAACTCTGGCTGCTaGTCCGAGCTCGTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPINSGC*SELVPR
Trigger: CCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTAT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCTAACTCCTACAGCCTaGGCGACCTCGGGCACCATG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLTPTA*ATSGTM
Trigger: CATGGTGCCCGAGGTCGCCCAGGCTGTAGGAGTTAG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCAGTTACCGTGGCCTTaGCAGGATTCGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPQLPWP*QDSELP
Trigger: GGGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGAGGCCTCGCTCTGTaGGGAGCGTGTACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGGLAL*GACTLA
Trigger: AGCCAGAGTACACGCTCCTCACAGAGCGAGGCCTCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGCGCCTGCGGGACTTTaGAACCAAGGATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPAPAGL*NQGSPA
Trigger: TGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTGCCGATACCATGGCTaGTCAGAGGTGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPCRYHG*SEVAER
Trigger: CCTCTCAGCCACCTCTGATCAGCCATGGTATCGGCA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCTGAGTGAGCCAGCTTaGGAAGGGGTCGTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLSEPA*EGVVPF
Trigger: AAACGGCACGACCCCTTCTCAAGCTGGCTCACTCAG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTGGTGGGCTGCGCCTaGGGGACTTTGAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLVGCA*GTLKPR
Trigger: CCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGACAGGCAGCTGCTATTaGGTAGGGACCGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPTGSCY*VGTARS
Trigger: TGACCTGGCGGTCCCTACGCAATAGCAGCTGCCTGT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCCAGGGTGTGGATCTaGTGGTGTCCCGGGAGAACC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPRVWI*WCPGRT
Trigger: GGTTCTCCCGGGACACCAGCAGATCCACACCCTGGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGTTCTTCATGTGGGGTaGGCCACTCTCCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLVLHVG*ATLPGH
Trigger: GTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAAC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCGGCTGCATTGCGCTTaGCCACCTTCTTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRLHCA*PPSCWC
Trigger: GCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAAATGGTCTCGGCTGTaGGCGAGGTGCCCCCATACA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPKWSRL*ARCPHT
Trigger: TGTATGGGGGCACCTCGCCCACAGCCGAGACCATTT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTCTTCTCCTCTGACTTaGGTGCGGGTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSSPLT*VRVWWA
Trigger: AGCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGGTGTCTTCTCCTCTaGCTTGAGTGCGGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGCLLL*LECGFG
Trigger: ACCAAACCCGCACTCAAGTCAGAGGAGAAGACACCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAAAACTCCACCTGGCTaGTGCTCCGAGCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLKTPPG*CSELVP
Trigger: GGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340954.11
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGCAGGGGCTCATTCTaGAGGATCCTCAACGCTTTG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGRGSF*RILNAL
Trigger: CAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCAGCATGTTCTCGGCTaGATTGCGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPQHVLG*IALGHL
Trigger: AAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGCGGGTTTGGTGGGCTaGGCCTGCGGGACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLAGLVG*ACGTLK
Trigger: TTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCGGCTGTGGGCGAGGTaGCCCCATACAACAACTCTC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRLWAR*PHTTTL
Trigger: GAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGATAAACTCTGGCTGCTaGTCCGAGCTCGTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLINSGC*SELVPR
Trigger: CCGGGGGACGAGCTCGGAGCAGCAGCCAGAGTTTAT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCACCTCCAGCCTCTCTaGCAGGGGCTCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLHLQPL*QGLILQ
Trigger: CTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGACAAAGTTCTTCATGTaGGGTGGGCCACTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPTKFFM*GGPLSR
Trigger: CCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCCCTGGCCATATTCTaGGCTTGTCTGTGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPLAIF*ACLWLD
Trigger: GTCAAGCCACAGACAAGCCCAGAATATGGCCAGGGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTTGCCTGCTGGATCTaGGCCAGTCGGCTAATCGGA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPFACWI*ASRLIG
Trigger: TCCGATTAGCCGACTGGCCCAGATCCAGCAGGCAAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCTAACTCCTACAGCCTaGGCGACCTCGGGCACCATG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLLTPTA*ATSGTM
Trigger: CATGGTGCCCGAGGTCGCCCAGGCTGTAGGAGTTAG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCAGTTACCGTGGCCTTaGCAGGATTCGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLQLPWP*QDSELP
Trigger: GGGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTCATGGCAGTTACCGTaGCCTTGGCAGGATTCGGAG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSWQLP*PWQDSE
Trigger: CTCCGAATCCTGCCAAGGCCACGGTAACTGCCATGA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGACTCTCGGGCTATCATaGCAGTTACCGTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPTLGLS*QLPWPW
Trigger: CCAAGGCCACGGTAACTGCCATGATAGCCCGAGAGT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGGATAGGGGCAAGTTaGGAGGGGACCAACCTAGCA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRIGAS*EGTNLA
Trigger: TGCTAGGTTGGTCCCCTCCCAACTTGCCCCTATCCT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGTGGGAAAATCGCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSGKIA*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGCGATTTTCCCACT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340954.11
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGCGCCTGCGGGACTTTaGAACCAAGGATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLAPAGL*NQGSPA
Trigger: TGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTGCCGATACCATGGCTaGTCAGAGGTGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLCRYHG*SEVAER
Trigger: CCTCTCAGCCACCTCTGATCAGCCATGGTATCGGCA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCTGAGTGAGCCAGCTTaGGAAGGGGTCGTGCCGTTT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLLSEPA*EGVVPF
Trigger: AAACGGCACGACCCCTTCTCAAGCTGGCTCACTCAG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGTGCCCGTTCCTTCTaGAGTGTGGTTTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGARSF*SVVSNL
Trigger: AAGGTTGGAAACCACACTGCAGAAGGAACGGGCACC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCACCTTCTTGTTGGTaGCCGTTCCTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPPSCW*PFLLQC
Trigger: ACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTGTTCTCGGCTGCATTaGGCTTGGCCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPCSRLH*AWPPSC
Trigger: ACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTGGTGGGCTGCGCCTaGGGGACTTTGAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLLVGCA*GTLKPR
Trigger: CCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGACAGGCAGCTGCTATTaGGTAGGGACCGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLTGSCY*VGTARS
Trigger: TGACCTGGCGGTCCCTACGCAATAGCAGCTGCCTGT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGTTATGCTTTCTGGCTaGTGCTCCGAGCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLVMLSG*CSELVP
Trigger: GGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAAC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347458.9
ENST00000371792.5
ENST00000371802.5
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTAATAAACTCTGGCTaGTGCTCCGAGCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLINSG*CSELVP
Trigger: GGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGATCCTCAACGCTTTaGCAGCAGCATCGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGSSTL*QQHRVS
Trigger: CGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCGGCTGCATTGCGCTTaGCCACCTTCTTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRLHCA*PPSCWC
Trigger: GCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCGACCTCGGGCACCATaGGAAGAATTCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRPRAP*EEFQQA
Trigger: TGCCTGCTGGAATTCTTCCCATGGTGCCCGAGGTCG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAAATGGTCTCGGCTGTaGGCGAGGTGCCCCCATACA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLKWSRL*ARCPHT
Trigger: TGTATGGGGGCACCTCGCCCACAGCCGAGACCATTT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTCTTCTCCTCTGACTTaGGTGCGGGTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLSSPLT*VRVWWA
Trigger: AGCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGGTGTCTTCTCCTCTaGCTTGAGTGCGGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGCLLL*LECGFG
Trigger: ACCAAACCCGCACTCAAGTCAGAGGAGAAGACACCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGCAGGGGCTCATTCTaGAGGATCCTCAACGCTTTG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGRGSF*RILNAL
Trigger: CAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTTCCAACCTTCACCTaGATCACAAACTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPFPTFT*ITNSLR
Trigger: CCGCAGGGAGTTTGTGATGCAGGTGAAGGTTGGAAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCAGCATGTTCTCGGCTaGATTGCGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLQHVLG*IALGHL
Trigger: AAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGCAGGATTCGGAGCTaGCCTGGTAAAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGRIRS*PGKIFG
Trigger: ACCAAAGATTTTACCAGGGCAGCTCCGAATCCTGCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGGGGTTATGCTTTCTaGAGCTGCACTGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRGYAF*SCTGGC
Trigger: ACATCCACCAGTGCAGCTGCAGAAAGCATAACCCCT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGGTGGAACTGGAAATaGGTAAAAGTACCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRWNWK*VKVPRG
Trigger: CCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGACAAAGTTCTTCATGTaGGGTGGGCCACTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLTKFFM*GGPLSR
Trigger: CCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCCCTGGCCATATTCTaGGCTTGTCTGTGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPLAIF*ACLWLD
Trigger: GTCAAGCCACAGACAAGCCCAGAATATGGCCAGGGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGATCGGATTGATCCCCTaGCCATATTCTGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPIGLIP*PYSGLV
Trigger: GACAAGCCCAGAATATGGCCAGGGGATCAATCCGAT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTCATGGCAGTTACCGTaGCCTTGGCAGGATTCGGAG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLSWQLP*PWQDSE
Trigger: CTCCGAATCCTGCCAAGGCCACGGTAACTGCCATGA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGACTCTCGGGCTATCATaGCAGTTACCGTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLTLGLS*QLPWPW
Trigger: CCAAGGCCACGGTAACTGCCATGATAGCCCGAGAGT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAGGGGTTATGCTTTCTaGCTGCTGCTCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRGYAF*LLLRAR
Trigger: ACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347458.9
ENST00000371792.5
ENST00000371802.5
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGTGCCCGTTCCTTCTaGAGTGTGGTTTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGARSF*SVVSNL
Trigger: AAGGTTGGAAACCACACTGCAGAAGGAACGGGCACC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCACCTTCTTGTTGGTaGCCGTTCCTTCTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPPSCW*PFLLQC
Trigger: ACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTGTTCTCGGCTGCATTaGGCTTGGCCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLCSRLH*AWPPSC
Trigger: ACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTAATAAACTCTGGCTaGTGCTCCGAGCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLLINSG*CSELVP
Trigger: GGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGATCCTCAACGCTTTaGCAGCAGCATCGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGSSTL*QQHRVS
Trigger: CGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCCCTGGTTTCTTTATaGGTGTCTTCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPLVSL*VSSPLT
Trigger: AGTCAGAGGAGAAGACACCCATAAAGAAACCAGGGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTTCCAACCTTCACCTaGATCACAAACTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLFPTFT*ITNSLR
Trigger: CCGCAGGGAGTTTGTGATGCAGGTGAAGGTTGGAAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTGAATGGGTCTACCTaGATTTTCAGAGGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLNGST*IFRGQR
Trigger: TCTCTGCCCTCTGAAAATGCAGGTAGACCCATTCAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAGGTGGAACTGGAAATaGGTAAAAGTACCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRWNWK*VKVPRG
Trigger: CCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCCCAACCGAAACCTTaGTCACAAAGTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPQPKP*SQSSSC
Trigger: ACATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGATCGGATTGATCCCCTaGCCATATTCTGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLIGLIP*PYSGLV
Trigger: GACAAGCCCAGAATATGGCCAGGGGATCAATCCGAT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTGTTATTCTTTAAAATaGTCTCGGCTGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPCYSLK*SRLWAR
Trigger: CCTCGCCCACAGCCGAGACCATTTTAAAGAATAACA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGTGGTTAATAAACTCTaGCTGCTGCTCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLVVNKL*LLLRAR
Trigger: ACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCAC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGTAAAGCAGAGTTTTaGATGGGTCTACCTGCATTT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGKAEF*MGLPAF
Trigger: AAATGCAGGTAGACCCATTCAAAACTCTGCTTTACC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCTTTGCCATTAAATTaGTGTCCTCCCACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPLPLN*CPPTES
Trigger: ACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCCCTGGTTTCTTTATaGGTGTCTTCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPLVSL*VSSPLT
Trigger: AGTCAGAGGAGAAGACACCCATAAAGAAACCAGGGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTCTTTGTATTCAACCTaGAATCCCTGGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSLYST*NPWTLE
Trigger: TTCCAGAGTCCAGGGATTCCAGGTTGAATACAAAGA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGCTTGTCTGTGGCTTaGCTATGGGTTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGLSVA*LWVLFS
Trigger: AGAAAACAAAACCCATAGTCAAGCCACAGACAAGCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCCCAACCGAAACCTTaGTCACAAAGTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPQPKP*SQSSSC
Trigger: ACATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCCTCAAGAACAGCTATaGCGGCATTTTTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPPQEQL*RHFSLK
Trigger: TTTCAAAGAAAAATGCCGCCATAGCTGTTCTTGAGG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTTTCTTCCATCCCCTaGTTTCTTTATGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPFSSIP*FLYGCL
Trigger: AAGACACCCATAAAGAAACCAGGGGATGGAAGAAAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTGTTATTCTTTAAAATaGTCTCGGCTGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLCYSLK*SRLWAR
Trigger: CCTCGCCCACAGCCGAGACCATTTTAAAGAATAACA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCGCCGGCGCAAACGCTaGAGAGCCGCTCAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRRRKR*RAAQAP
Trigger: GGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
CDS-3UTR TCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTAGATAAGGCATCCTaGACTCATCCTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLDKAS*THPLYY
Trigger: GTAATAAAGAGGATGAGTTCAGGATGCCTTATCTAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCTTTGCCATTAAATTaGTGTCCTCCCACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPLPLN*CPPTES
Trigger: ACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPQVPFK*NLKHLT
Trigger: AGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGTAAACAGCTTTCAGTaGAGGTTAATTCAGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPVNSFQ*RLIQCY
Trigger: ATAGCACTGAATTAACCTGCACTGAAAGCTGTTTAC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTATGCTTTCTGCAGCTaGACTGGTGGATGTAATAGA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLYAFCS*TGGCNR
Trigger: TCTATTACATCCACCAGTGCAGCTGCAGAAAGCATA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAGATCTTCAGACTTTTaGCCAGATGGAATCACAAGC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRSSDF*PDGITS
Trigger: GCTTGTGATTCCATCTGGGCAAAAGTCTGAAGATCT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGCGGTCCTGGGCGGTaGCGGCGAGGAGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGGPGR*RRGGEG
Trigger: TCCTTCCCCTCCTCGCCGCCACCGCCCAGGACCGCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTCTTTGTATTCAACCTaGAATCCCTGGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLSLYST*NPWTLE
Trigger: TTCCAGAGTCCAGGGATTCCAGGTTGAATACAAAGA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTTACTTACATTCCATaGGGAGAAAAATTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPFTYIP*GEKFQR
Trigger: ACGCTGGAATTTTTCTCCCCATGGAATGTAAGTAAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCTTGAACTTGAGACATaGTCACTTTCAACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLELET*SLSTKV
Trigger: CACTTTTGTTGAAAGTGACCATGTCTCAAGTTCAAG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR CCA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGACTTTTGCCCAGATaGAATCACAAGCATTACAAA +
Preference number: 4 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRLLPR*NHKHYK
Trigger: TTTGTAATGCTTGTGATTCCATCTGGGCAAAAGTCT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGATTCTGGGCTTGTCTTaGCTATGGGTTTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLILGLS*LWVLFS
Trigger: AGAAAACAAAACCCATAGTCAAGACAAGCCCAGAAT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371792.5
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCCTCAAGAACAGCTATaGCGGCATTTTTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLPQEQL*RHFSLK
Trigger: TTTCAAAGAAAAATGCCGCCATAGCTGTTCTTGAGG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTTTCTTCCATCCCCTaGTTTCTTTATGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLFSSIP*FLYGCL
Trigger: AAGACACCCATAAAGAAACCAGGGGATGGAAGAAAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAAGCAGAGTTTTGAATaGGTCTACCTGCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLKQSFE*VYLHFQ
Trigger: CTGAAAATGCAGGTAGACCCATTCAAAACTCTGCTT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR TCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTAGATAAGGCATCCTaGACTCATCCTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLLDKAS*THPLYY
Trigger: GTAATAAAGAGGATGAGTTCAGGATGCCTTATCTAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGACTCCACCTGGCTGCTaGTCCGAGCTCGTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQTPPGC*SELVPR
Trigger: CCGGGGGACGAGCTCGGAGCAGCAGCCAGGTGGAGT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340954.11
CDS-3UTR GCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLQVPFK*NLKHLT
Trigger: AGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTTACTTACATTCCATaGGGAGAAAAATTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLFTYIP*GEKFQR
Trigger: ACGCTGGAATTTTTCTCCCCATGGAATGTAAGTAAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGAGGCCTCGCTCTGTaGGGAGCGTGTACTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGGLAL*GACTLA
Trigger: AGCCAGAGTACACGCTCCTCACAGAGCGAGGCCTCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGATGCTTTCTGGCTGCTaGTCCGAGCTCGTCCCCCGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQMLSGC*SELVPR
Trigger: CCGGGGGACGAGCTCGGAGCAGCAGCCAGAAAGCAT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000347458.9
ENST00000371792.5
ENST00000371802.5
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGTTCTTCATGTGGGGTaGGCCACTCTCCCGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQVLHVG*ATLPGH
Trigger: GTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAAC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGCGGGTTTGGTGGGCTaGGCCTGCGGGACTTTGAAA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQAGLVG*ACGTLK
Trigger: TTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCGGCTGTGGGCGAGGTaGCCCCATACAACAACTCTC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRLWAR*PHTTTL
Trigger: GAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCACCTCCAGCCTCTCTaGCAGGGGCTCATTCTGCAG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQHLQPL*QGLILQ
Trigger: CTGCAGAATGAGCCCCTGCCAGAGAGGCTGGAGGTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCTAACTCCTACAGCCTaGGCGACCTCGGGCACCATG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQLTPTA*ATSGTM
Trigger: CATGGTGCCCGAGGTCGCCCAGGCTGTAGGAGTTAG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCAGTTACCGTGGCCTTaGCAGGATTCGGAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQQLPWP*QDSELP
Trigger: GGGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGCGCCTGCGGGACTTTaGAACCAAGGATCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQAPAGL*NQGSPA
Trigger: TGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTGCCGATACCATGGCTaGTCAGAGGTGGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQCRYHG*SEVAER
Trigger: CCTCTCAGCCACCTCTGATCAGCCATGGTATCGGCA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTGGTGGGCTGCGCCTaGGGGACTTTGAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQLVGCA*GTLKPR
Trigger: CCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGTTATGCTTTCTGGCTaGTGCTCCGAGCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQVMLSG*CSELVP
Trigger: GGGGACGAGCTCGGAGCAGCAGCCAGAAAGCATAAC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000347458.9
ENST00000371792.5
ENST00000371802.5
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGAGCAAAACTCCACCTaGCTGCTGCTCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQEQNST*LLLRAR
Trigger: ACGAGCTCGGAGCAGCAGCCAGGTGGAGTTTTGCTC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340954.11
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCGGCTGCATTGCGCTTaGCCACCTTCTTGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRLHCA*PPSCWC
Trigger: GCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCGACCTCGGGCACCATaGGAAGAATTCCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRPRAP*EEFQQA
Trigger: TGCCTGCTGGAATTCTTCCCATGGTGCCCGAGGTCG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAAATGGTCTCGGCTGTaGGCGAGGTGCCCCCATACA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQKWSRL*ARCPHT
Trigger: TGTATGGGGGCACCTCGCCCACAGCCGAGACCATTT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTCTTCTCCTCTGACTTaGGTGCGGGTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQSSPLT*VRVWWA
Trigger: AGCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGGTGTCTTCTCCTCTaGCTTGAGTGCGGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGCLLL*LECGFG
Trigger: ACCAAACCCGCACTCAAGTCAGAGGAGAAGACACCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGCAGGGGCTCATTCTaGAGGATCCTCAACGCTTTG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGRGSF*RILNAL
Trigger: CAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCAGCATGTTCTCGGCTaGATTGCGCTTGGCCACCTT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQQHVLG*IALGHL
Trigger: AAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGACAAAGTTCTTCATGTaGGGTGGGCCACTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQTKFFM*GGPLSR
Trigger: CCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTTGCCTGCTGGATCTaGGCCAGTCGGCTAATCGGA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQFACWI*ASRLIG
Trigger: TCCGATTAGCCGACTGGCCCAGATCCAGCAGGCAAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTCATGGCAGTTACCGTaGCCTTGGCAGGATTCGGAG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQSWQLP*PWQDSE
Trigger: CTCCGAATCCTGCCAAGGCCACGGTAACTGCCATGA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGACTCTCGGGCTATCATaGCAGTTACCGTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQTLGLS*QLPWPW
Trigger: CCAAGGCCACGGTAACTGCCATGATAGCCCGAGAGT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAGGGGTTATGCTTTCTaGCTGCTGCTCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRGYAF*LLLRAR
Trigger: ACGAGCTCGGAGCAGCAGCCAGAAAGCATAACCCCT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000347458.9
ENST00000371792.5
ENST00000371802.5
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAGGATAGGGGCAAGTTaGGAGGGGACCAACCTAGCA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRIGAS*EGTNLA
Trigger: TGCTAGGTTGGTCCCCTCCCAACTTGCCCCTATCCT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGTGCCCGTTCCTTCTaGAGTGTGGTTTCCAACCTT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGARSF*SVVSNL
Trigger: AAGGTTGGAAACCACACTGCAGAAGGAACGGGCACC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTGTTCTCGGCTGCATTaGGCTTGGCCACCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQCSRLH*AWPPSC
Trigger: ACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTAATAAACTCTGGCTaGTGCTCCGAGCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQLINSG*CSELVP
Trigger: GGGGACGAGCTCGGAGCAGCAGCCAGAGTTTATTAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGATCCTCAACGCTTTaGCAGCAGCATCGTGTTTCG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGSSTL*QQHRVS
Trigger: CGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCCCCTGGCCATATTCTaGGCTTGTCTTGACTATGGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQPLAIF*ACLDYG
Trigger: CCCATAGTCAAGACAAGCCCAGAATATGGCCAGGGG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371792.5
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTTCCAACCTTCACCTaGATCACAAACTCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQFPTFT*ITNSLR
Trigger: CCGCAGGGAGTTTGTGATGCAGGTGAAGGTTGGAAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGCAGGATTCGGAGCTaGCCTGGTAAAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGRIRS*PGKIFG
Trigger: ACCAAAGATTTTACCAGGGCAGCTCCGAATCCTGCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAGGTGGAACTGGAAATaGGTAAAAGTACCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRWNWK*VKVPRG
Trigger: CCCCCGAGGTACTTTTACCCATTTCCAGTTCCACCT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGATCGGATTGATCCCCTaGCCATATTCTGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQIGLIP*PYSGLV
Trigger: GACAAGCCCAGAATATGGCCAGGGGATCAATCCGAT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGTGGTTAATAAACTCTaGCTGCTGCTCCGAGCTCGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQVVNKL*LLLRAR
Trigger: ACGAGCTCGGAGCAGCAGCCAGAGTTTATTAACCAC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCCCCTGGTTTCTTTATaGGTGTCTTCTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQPLVSL*VSSPLT
Trigger: AGTCAGAGGAGAAGACACCCATAAAGAAACCAGGGG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCCTTTGCCATTAAATTaGTGTCCTCCCACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQPLPLN*CPPTES
Trigger: ACTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAGATCTTCAGACTTTTaGCCAGATGGAATCACAAGC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRSSDF*PDGITS
Trigger: GCTTGTGATTCCATCTGGGCAAAAGTCTGAAGATCT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTGTTGTAGTTATAGGTaGACTGCATCCGAGAGTAAG +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQCCSYR*TASESK
Trigger: CTTACTCTCGGATGCAGTCCACCTATAACTACAACA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTCTTTGTATTCAACCTaGAATCCCTGGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQSLYST*NPWTLE
Trigger: TTCCAGAGTCCAGGGATTCCAGGTTGAATACAAAGA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCCTCAAGAACAGCTATaGCGGCATTTTTCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQPQEQL*RHFSLK
Trigger: TTTCAAAGAAAAATGCCGCCATAGCTGTTCTTGAGG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTTTCTTCCATCCCCTaGTTTCTTTATGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQFSSIP*FLYGCL
Trigger: AAGACACCCATAAAGAAACCAGGGGATGGAAGAAAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR TCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTAGATAAGGCATCCTaGACTCATCCTCTTTATTAC +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQLDKAS*THPLYY
Trigger: GTAATAAAGAGGATGAGTTCAGGATGCCTTATCTAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR GCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQQVPFK*NLKHLT
Trigger: AGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTTACTTACATTCCATaGGGAGAAAAATTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQFTYIP*GEKFQR
Trigger: ACGCTGGAATTTTTCTCCCCATGGAATGTAAGTAAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CCA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAGACTTTTGCCCAGATaGAATCACAAGCATTACAAA +
Preference number: 4 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRLLPR*NHKHYK
Trigger: TTTGTAATGCTTGTGATTCCATCTGGGCAAAAGTCT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGACTTGAGTGCGGGTTaGGTGGGCTGCGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPDLSAG*VGCACG
Trigger: CCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGACTTGAGTGCGGGTTaGGTGGGCTGCGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLDLSAG*VGCACG
Trigger: CCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGCAGTTACCGTGGCCTaGGCAGGATTCGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPAVTVA*AGFGAA
Trigger: GGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTGC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCGCTTGGCCACCTTCTaGTTGGTGCCCGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRLATF*LVPVPS
Trigger: AGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTCGGCTGCATTGCGCTaGGCCACCTTCTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSAALR*ATFLLV
Trigger: CACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTGCGCCTGCGGGACTTaGAAACCAAGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPCACGT*KPRISS
Trigger: GCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGCAGTTACCGTGGCCTaGGCAGGATTCGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLAVTVA*AGFGAA
Trigger: GGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTGC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCACAGGCAGCTGCTATaGCGTAGGGACCGCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLHRQLL*RRDRQV
Trigger: GACCTGGCGGTCCCTACGCAATAGCAGCTGCCTGTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGCTCCTTCTCCTTTTTaGCCTGCTGGATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPAPSPF*PAGSGP
Trigger: TGGCCCAGATCCAGCAGGCAAAAAAGGAGAAGGAGC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTGGCCACCTTCTTGTaGGTGCCCGTTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPLATFL*VPVPSA
Trigger: TGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGATGTTCTCGGCTGCATaGCGCTTGGCCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPMFSAA*RLATFL
Trigger: CAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACAT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGCAGGACTCCACATCCTaGCCGATACCATGGCTGATC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPQDSTS*PIPWLI
Trigger: GATCAGCCATGGTATCGGCAAGGATGTGGAGTCCTG...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGGATCCTCAACGCTTaGGCAGCAGCATCGTGTTTC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRILNA*AAASCF
Trigger: GAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCGCTTGGCCACCTTCTaGTTGGTGCCCGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRLATF*LVPVPS
Trigger: AGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTCGGCTGCATTGCGCTaGGCCACCTTCTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLSAALR*ATFLLV
Trigger: CACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTGCGCCTGCGGGACTTaGAAACCAAGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLCACGT*KPRISS
Trigger: GCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGTCTTCTCCTCTGACTaGAGTGCGGGTTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLVFSSD*SAGLVG
Trigger: GCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGAC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGCCACAGCCGCCTCCTaGTGTTTCTGTTGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLATAAS*CFCCLP
Trigger: GGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAAGGATAGGGGCAAGTaGGGAGGGGACCAACCTAGC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLKDRGK*GGDQPS
Trigger: GCTAGGTTGGTCCCCTCCCAACTTGCCCCTATCCTT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGCTCCTTCTCCTTTTTaGCCTGCTGGATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLAPSPF*PAGSGP
Trigger: TGGCCCAGATCCAGCAGGCAAAAAAGGAGAAGGAGC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTGGCCACCTTCTTGTaGGTGCCCGTTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLLATFL*VPVPSA
Trigger: TGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGATGTTCTCGGCTGCATaGCGCTTGGCCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLMFSAA*RLATFL
Trigger: CAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACAT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCAGGACTCCACATCCTaGCCGATACCATGGCTGATC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLQDSTS*PIPWLI
Trigger: GATCAGCCATGGTATCGGCAAGGATGTGGAGTCCTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 90 bp CGCCTGCGGGACTTTGAAACCAAGGATCTCCAGCATGTTCTCGGCTaGATTGCGCTTGGCCACCTTCTTGTTGGTGCCCGTTCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RLRDFETKDLQHVLG*IALGHLLVGARSFC
Trigger: GCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 90 bp GGTGTCTTCTCCTCTGACTTGAGTGCGGGTTTGGTGGGCTGCGCCTaGGGGACTTTGAAACCAAGGATCTCCAGCATGTTCTCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: GVFSSDLSAGLVGCA*GTLKPRISSMFSAA
Trigger: TGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTCCCCAACCGAAACCTaGGTCACAAAGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSPTET*VTKFFM
Trigger: CATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGGA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGGCTTGTCTGTGGCTaGACTATGGGTTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGLVCG*TMGFVF
Trigger: GAAAACAAAACCCATAGTCAAGCCACAGACAAGCCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTTTGGTGTGATGTCCTaGACTAACTCCTACAGCCTG +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPFGVMS*TNSYSL
Trigger: CAGGCTGTAGGAGTTAGTCAAGGACATCACACCAAA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 90 bp GGCTGCATTGCGCTTGGCCACCTTCTTGTTGGTGCCCGTTCCTTCTaGAGTGTGGTTTCCAACCTTCACCTGCATCACAAACTCCCTGCG +
Preference number: 5 (lower is better)
Translates to: GCIALGHLLVGARSF*SVVSNLHLHHKLPA
Trigger: CGCAGGGAGTTTGTGATGCAGGTGAAGGTTGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 90 bp CCAGCCTCTCTGGCAGGGGCTCATTCTGCAGGATCCTCAACGCTTTaGCAGCAGCATCGTGTTTCGCAGCCTGTCTTGTCTTTCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PASLAGAHSAGSSTL*QQHRVSQPVLSFLC
Trigger: GCAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
ENST00000437404.2
ENST00000456866.2
CDS CCA 90 bp CCCACAAACTCCCCAACCGAAACCTTGGTCACAAAGTTCTTCATGTaGGGTGGGCCACTCTCCCGGGCCACCTCGAAATTCACAGGCAAG +
Preference number: 5 (lower is better)
Translates to: PTNSPTETLVTKFFM*GGPLSRATSKFTGK
Trigger: CTTGCCTGTGAATTTCGAGGTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGGAGTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371856.7
CDS CCA 90 bp CCCACAAACTCCCCAACCGAAACCTTGGTCACAAAGTTCTTCATGTaGGGTGGGCCACTCTCCCGGGCCACCTGTTTCAGAGGGAAAGAC +
Preference number: 5 (lower is better)
Translates to: PTNSPTETLVTKFFM*GGPLSRATCFRGKD
Trigger: GTCTTTCCCTCTGAAACAGGTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGGAGTTTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371802.5
ENST00000371828.7
ENST00000437404.2
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTCCTTTGCCATTAAATaGCTGTCCTCCCACAGAAAG +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPSFAIK*LSSHRK
Trigger: CTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGTTCTGAACTTGCACTaGAACTTGAGACATGGTCAC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPVLNLH*NLRHGH
Trigger: GTGACCATGTCTCAAGTTCAAGTGCAAGTTCAGAAC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGAGAAGAGACTGGTTCTaGTTCAGTATTTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPRRDWF*FSIWLP
Trigger: AGGGAGCCAAATACTGAACAAGAACCAGTCTCTTCT...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS GCA 90 bp CCAGCATGTTCTCGGCTGCATTGCGCTTGGCCACCTTCTTGTTGGTaGCCGTTCCTTCTGCAGTGTGGTTTCCAACCTTCACCTGCATCA +
Preference number: 5 (lower is better)
Translates to: PACSRLHCAWPPSCW*PFLLQCGFQPSPAS
Trigger: TGATGCAGGTGAAGGTTGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 90 bp TCTCCAGCATGTTCTCGGCTGCATTGCGCTTGGCCACCTTCTTGTTaGTGCCCGTTCCTTCTGCAGTGTGGTTTCCAACCTTCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SPACSRLHCAWPPSC*CPFLLQCGFQPSPA
Trigger: TGCAGGTGAAGGTTGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTCCCCAACCGAAACCTaGGTCACAAAGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLSPTET*VTKFFM
Trigger: CATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGGA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGGCTTGTCTGTGGCTaGACTATGGGTTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGLVCG*TMGFVF
Trigger: GAAAACAAAACCCATAGTCAAGCCACAGACAAGCCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTTTGGTGTGATGTCCTaGACTAACTCCTACAGCCTG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLFGVMS*TNSYSL
Trigger: CAGGCTGTAGGAGTTAGTCAAGGACATCACACCAAA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGGGAACAATGTTGTCTTaGTTCAGTTCTGAGAGGTTA +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPGTMLS*FSSERL
Trigger: TAACCTCTCAGAACTGAACAAAGACAACATTGTTCC...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340954.11
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGTCCTTTGCCATTAAATaGCTGTCCTCCCACAGAAAG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLSFAIK*LSSHRK
Trigger: CTTTCTGTGGGAGGACAGCAATTTAATGGCAAAGGA...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGCAGATCTTCAGACTTTaGCCCAGATGGAATCACAAG +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLQIFRL*PRWNHK
Trigger: CTTGTGATTCCATCTGGGCAAAAGTCTGAAGATCTG...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp TCACCGAGTGGCCATCACAACAAACCCCAGCACAGTCCAGCCCGGCCACAGCCGTATTCTGGGCTTGTCTaGACTATGGGTTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: SPSGHHNKPQHSPARPQPYSGLV*TMGFVF
Trigger: GAAAACAAAACCCATAGTCAAGACAAGCCCAGAATA...CGGCTGTGGCCGGGCTGGACTGTGCTGGGGTTTGTTGTGATGGCCACTCGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371792.5
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGAGATGGGTTCTGAACTaGCACTTGAACTTGAGACAT +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLRWVLN*HLNLRH
Trigger: ATGTCTCAAGTTCAAGTGCAAGTTCAGAACCCATCT...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS CCA 90 bp GTACGTGGCCTGAAGAGATGTTATTCTTTAAAATGGTCTCGGCTGTaGGCGAGGTGCCCCCATACAACAACTCTCGGGCTATCATGGCAG +
Preference number: 5 (lower is better)
Translates to: VRGLKRCYSLKWSRL*ARCPHTTTLGLSWQ
Trigger: CTGCCATGATAGCCCGAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCGAGACCATTTTAAAGAATAACATCTCTTCAGGCCACGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp ACAGTCCAGCCCGGCCACAGCCGCCTCCTTGTGTTTCTGTTGTCTTCCCTGCTGGGAACAATGTTGTCTTaGTTCAGTTCTGAGAGGTTA +
Preference number: 5 (lower is better)
Translates to: TVQPGHSRLLVFLLSSLLGTMLS*FSSERL
Trigger: TAACCTCTCAGAACTGAACAAAGACAACATTGTTCC...CAGCAGGGAAGACAACAGAAACACAAGGAGGCGGCTGTGGCCGGGCTGGACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340954.11
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS GCA 90 bp CTGAAGAGATGTTATTCTTTAAAATGGTCTCGGCTGTGGGCGAGGTaGCCCCATACAACAACTCTCGGGCTATCATGGCAGTTACCGTGG +
Preference number: 5 (lower is better)
Translates to: LKRCYSLKWSRLWAR*PHTTTLGLSWQLPW
Trigger: CCACGGTAACTGCCATGATAGCCCGAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCGAGACCATTTTAAAGAATAACATCTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 90 bp AAACAACAGCATGAACTCAAAACCCTGGCAGGCAGGAAGGTCAAATaGCAGAAGCCTGCAACGCAGTACAATCCCTGGGTCATCTTGGTG +
Preference number: 5 (lower is better)
Translates to: KQQHELKTLAGRKVK*QKPATQYNPWVILV
Trigger: CACCAAGATGACCCAGGGATTGTACTGCGTTGCAGGCTTCTGCCATTTGACCTTCCTGCCTGCCAGGGTTTTGAGTTCATGCTGTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGACTTGAGTGCGGGTTaGGTGGGCTGCGCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQDLSAG*VGCACG
Trigger: CCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 90 bp GGCAGGAAGGTCAAATGGCAGAAGCCTGCAACGCAGTACAATCCCTaGGTCATCTTGGTGATTGTCTCATGGATAAATGCTGAAGGGGAA +
Preference number: 5 (lower is better)
Translates to: GRKVKWQKPATQYNP*VILVIVSWINAEGE
Trigger: TTCCCCTTCAGCATTTATCCATGAGACAATCACCAAGATGACCCAGGGATTGTACTGCGTTGCAGGCTTCTGCCATTTGACCTTCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGCAGTTACCGTGGCCTaGGCAGGATTCGGAGCTGCC +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQAVTVA*AGFGAA
Trigger: GGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTGC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 90 bp AGTACCTCGGGGGATAAGCACCTCCTCTCATGTTGTAGTTATAGGTaGACTGCATCCGAGAGTAAGGGTCAACAGGCTTATACATTGGTT +
Preference number: 5 (lower is better)
Translates to: STSGDKHLLSCCSYR*TASESKGQQAYTLV
Trigger: AACCAATGTATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCCCGAGGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
ENST00000437404.2
ENST00000456866.2
CDS TCA 90 bp GCTGCACTGGTGGATGTAATAGATGCAGAGGGTAAAGCAGAGTTTTaGATGGGTCTACCTGCATTTTCAGAGGGCAGAGAGCTAGTAGTA +
Preference number: 5 (lower is better)
Translates to: AALVDVIDAEGKAEF*MGLPAFSEGRELVV
Trigger: TACTACTAGCTCTCTGCCCTCTGAAAATGCAGGTAGACCCATTCAAAACTCTGCTTTACCCTCTGCATCTATTACATCCACCAGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCGCTTGGCCACCTTCTaGTTGGTGCCCGTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQRLATF*LVPVPS
Trigger: AGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTCGGCTGCATTGCGCTaGGCCACCTTCTTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQSAALR*ATFLLV
Trigger: CACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTGCGCCTGCGGGACTTaGAAACCAAGGATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQCACGT*KPRISS
Trigger: GCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGTCTTCTCCTCTGACTaGAGTGCGGGTTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQVFSSD*SAGLVG
Trigger: GCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGAC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGCTCCTTCTCCTTTTTaGCCTGCTGGATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQAPSPF*PAGSGP
Trigger: TGGCCCAGATCCAGCAGGCAAAAAAGGAGAAGGAGC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTGGCCACCTTCTTGTaGGTGCCCGTTCCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQLATFL*VPVPSA
Trigger: TGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGATGTTCTCGGCTGCATaGCGCTTGGCCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQMFSAA*RLATFL
Trigger: CAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACAT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCAGGACTCCACATCCTaGCCGATACCATGGCTGATC +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQQDSTS*PIPWLI
Trigger: GATCAGCCATGGTATCGGCAAGGATGTGGAGTCCTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS TCA 90 bp TTAAAAAGAGGGCGTTCCAGGAACAATGTTGTCTTTGTTCAGTTCTaGGAGGTTAAGTGGTTAATAAACTCTGGCTGCTGCTCCGAGCTC +
Preference number: 5 (lower is better)
Translates to: LKRGRSRNNVVFVQF*EVKWLINSGCCSEL
Trigger: GAGCTCGGAGCAGCAGCCAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360426.8
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTCCCCAACCGAAACCTaGGTCACAAAGTTCTTCATG +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQSPTET*VTKFFM
Trigger: CATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGGA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGGGGCTTGTCTGTGGCTaGACTATGGGTTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQGLVCG*TMGFVF
Trigger: GAAAACAAAACCCATAGTCAAGCCACAGACAAGCCC...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGTTTGGTGTGATGTCCTaGACTAACTCCTACAGCCTG +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQFGVMS*TNSYSL
Trigger: CAGGCTGTAGGAGTTAGTCAAGGACATCACACCAAA...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 90 bp ACTCTCCCGGGCCACCTCGAAATTCACAGGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACTTATTTCAGATTTATTGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: TLPGHLEIHRQVPFK*NLKHLTYFRFIEIF
Trigger: GAAAATCTCAATAAATCTGAAATAAGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATTTCGAGGTGGCCCGGGAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371856.7
CDS GCA 90 bp CACTTCACACATCAGGACATCAGGGGTCTCCTTTATTATATGTTCTaGAGTCCATCAGGCTACTCATTTAAGTACAAACAACAGCATGAA +
Preference number: 5 (lower is better)
Translates to: HFTHQDIRGLLYYMF*SPSGYSFKYKQQHE
Trigger: TTCATGCTGTTGTTTGTACTTAAATGAGTAGCCTGATGGACTGCAGAACATATAATAAAGGAGACCCCTGATGTCCTGATGTGTGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGCAGATCTTCAGACTTTaGCCCAGATGGAATCACAAG +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQQIFRL*PRWNHK
Trigger: CTTGTGATTCCATCTGGGCAAAAGTCTGAAGATCTG...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371828.7
ENST00000371856.7
CDS TCA 90 bp TTAAAAAGAGGGCGTTCCAGGAACAATGTTGTCTTTGTTCAGTTCTaGGAGGTTAAGTGGTTAATAAACTCTGTAATCTCAGCTTATCGG +
Preference number: 5 (lower is better)
Translates to: LKRGRSRNNVVFVQF*EVKWLINSVISAYR
Trigger: CCGATAAGCTGAGATTACAGAGTTTATTAACCACTTAACCTCTCAGAACTGAACAAAGACAACATTGTTCCTGGAACGCCCTCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340954.11
ENST00000437404.2
CDS-3UTR CAA 90 bp CACAACATCAAAAGCAACACAGCTGTATACAGAAACGTAGGTCATTCTTTTCAGAACTTGCACTTGAACTaGAGACATGGTCACTTTCAA +
Preference number: 5 (lower is better)
Translates to: HNIKSNTAVYRNVGHSFQNLHLN*RHGHFQ
Trigger: TTGAAAGTGACCATGTCTCAAGTTCAAGTGCAAGTT...CTGAAAAGAATGACCTACGTTTCTGTATACAGCTGTGTTGCTTTTGATGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS GCA 90 bp TTTCAGAGGGAAAGACTCGAAATTCACAGGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACTTATTTCAGATTTATTGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: FQRERLEIHRQVPFK*NLKHLTYFRFIEIF
Trigger: GAAAATCTCAATAAATCTGAAATAAGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATTTCGAGTCTTTCCCTCTGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371802.5
ENST00000371828.7
ENST00000437404.2
CDS TCA 72 bp AGCCGAGAGAGACGCGGCAGCCGCCGGCGCAAACGCTaGAGAGCCGCTCAGGCGCCCGCAGCCCGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: SRERRGSRRRKR*RAAQAPAARQE
Trigger: TTCCTGCCGGGCTGCGGGCGCCTGAGCGGCTCTTCAGCGTTTGCGCCGGCGGCTGCCGCGTCTCTCTCGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000437404.2
CDS CAA 90 bp TCCTCTGACTTGAGTGCGGGTTTGGTGGGCTGCGCCTGCGGGACTTaGAAACCAAGGATCTCCAGCATGTTCTCGGCTGCATTGCGCTTG +
Preference number: 6 (lower is better)
Translates to: SSDLSAGLVGCACGT*KPRISSMFSAALRL
Trigger: CAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 72 bp TTGAGTGCGGGTTTGGTGGGCTGCGCCTGCGGGACTTaGAAACCAAGGATCTCCAGCATGTTCTCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LSAGLVGCACGT*KPRISSMFSAA
Trigger: TGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGCACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 90 bp GGCAGGATTCGGAGCTGCCCTGGTAAAATCTTTGGTGTGATGTCCTaGACTAACTCCTACAGCCTGGGCGACCTCGGGCACCATGGGAAG +
Preference number: 6 (lower is better)
Translates to: GRIRSCPGKIFGVMS*TNSYSLGDLGHHGK
Trigger: CTTCCCATGGTGCCCGAGGTCGCCCAGGCTGTAGGAGTTAGTCAAGGACATCACACCAAAGATTTTACCAGGGCAGCTCCGAATCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 72 bp TCCTCTGACTTGAGTGCGGGTTTGGTGGGCTGCGCCTaGGGGACTTTGAAACCAAGGATCTCCAGCATGTTC +
Preference number: 6 (lower is better)
Translates to: SSDLSAGLVGCA*GTLKPRISSMF
Trigger: GAACATGCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 72 bp TCCCCAACCGAAACCTTGGTCACAAAGTTCTTCATGTaGGGTGGGCCACTCTCCCGGGCCACCTCGAAATTC +
Preference number: 6 (lower is better)
Translates to: SPTETLVTKFFM*GGPLSRATSKF
Trigger: GAATTTCGAGGTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGTGACCAAGGTTTCGGTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371856.7
CDS CCA 72 bp CAAGGATCTCCAGCATGTTCTCGGCTGCATTGCGCTTaGCCACCTTCTTGTTGGTGCCCGTTCCTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: QGSPACSRLHCA*PPSCWCPFLLQ
Trigger: CTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 72 bp CCAAGGATCTCCAGCATGTTCTCGGCTGCATTGCGCTaGGCCACCTTCTTGTTGGTGCCCGTTCCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: PRISSMFSAALR*ATFLLVPVPSA
Trigger: TGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 72 bp CGGAGCTGCCCTGGTAAAATCTTTGGTGTGATGTCCTaGACTAACTCCTACAGCCTGGGCGACCTCGGGCAC +
Preference number: 6 (lower is better)
Translates to: RSCPGKIFGVMS*TNSYSLGDLGH
Trigger: GTGCCCGAGGTCGCCCAGGCTGTAGGAGTTAGTCAAGGACATCACACCAAAGATTTTACCAGGGCAGCTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 90 bp TCCAGCCTCTCTGGCAGGGGCTCATTCTGCAGGATCCTCAACGCTTaGGCAGCAGCATCGTGTTTCGCAGCCTGTCTTGTCTTTCCTTTG +
Preference number: 6 (lower is better)
Translates to: SSLSGRGSFCRILNA*AAASCFAACLVFPL
Trigger: CAAAGGAAAGACAAGACAGGCTGCGAAACACGATGCTGCTGCCAAAGCGTTGAGGATCCTGCAGAATGAGCCCCTGCCAGAGAGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
ENST00000437404.2
ENST00000456866.2
CDS CAA 90 bp AGGATCTCCAGCATGTTCTCGGCTGCATTGCGCTTGGCCACCTTCTaGTTGGTGCCCGTTCCTTCTGCAGTGTGGTTTCCAACCTTCACC +
Preference number: 6 (lower is better)
Translates to: RISSMFSAALRLATF*LVPVPSAVWFPTFT
Trigger: GGTGAAGGTTGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 90 bp TGCGGGACTTTGAAACCAAGGATCTCCAGCATGTTCTCGGCTGCATaGCGCTTGGCCACCTTCTTGTTGGTGCCCGTTCCTTCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: CGTLKPRISSMFSAA*RLATFLLVPVPSAV
Trigger: CACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGTCCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 90 bp CCTGGTTTCTTTATGGGTGTCTTCTCCTCTGACTTGAGTGCGGGTTaGGTGGGCTGCGCCTGCGGGACTTTGAAACCAAGGATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PGFFMGVFSSDLSAG*VGCACGTLKPRISS
Trigger: GCTGGAGATCCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGACACCCATAAAGAAACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 72 bp TCTCGGCTGCATTGCGCTTGGCCACCTTCTTGTTGGTaGCCGTTCCTTCTGCAGTGTGGTTTCCAACCTTCA +
Preference number: 6 (lower is better)
Translates to: SRLHCAWPPSCW*PFLLQCGFQPS
Trigger: TGAAGGTTGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 72 bp AACCGAAACCTTGGTCACAAAGTTCTTCATGTGGGGTaGGCCACTCTCCCGGGCCACCTCGAAATTCACAGG +
Preference number: 6 (lower is better)
Translates to: NRNLGHKVLHVG*ATLPGHLEIHR
Trigger: CCTGTGAATTTCGAGGTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGTGACCAAGGTTTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371856.7
CDS CCA 72 bp AACCGAAACCTTGGTCACAAAGTTCTTCATGTGGGGTaGGCCACTCTCCCGGGCCACCTGTTTCAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: NRNLGHKVLHVG*ATLPGHLFQRE
Trigger: TTCCCTCTGAAACAGGTGGCCCGGGAGAGTGGCCCACCCCACATGAAGAACTTTGTGACCAAGGTTTCGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371802.5
ENST00000371828.7
ENST00000437404.2
CDS CAA 72 bp TTTATGGGTGTCTTCTCCTCTGACTTGAGTGCGGGTTaGGTGGGCTGCGCCTGCGGGACTTTGAAACCAAGG +
Preference number: 6 (lower is better)
Translates to: FMGVFSSDLSAG*VGCACGTLKPR
Trigger: CCTTGGTTTCAAAGTCCCGCAGGCGCAGCCCACCAAACCCGCACTCAAGTCAGAGGAGAAGACACCCATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 72 bp GCCACCTTCTTGTTGGTGCCCGTTCCTTCTGCAGTGTaGTTTCCAACCTTCACCTGCATCACAAACTCCCTG +
Preference number: 6 (lower is better)
Translates to: ATFLLVPVPSAV*FPTFTCITNSL
Trigger: CAGGGAGTTTGTGATGCAGGTGAAGGTTGGAAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 72 bp CATGAACTCAAAACCCTGGCAGGCAGGAAGGTCAAATaGCAGAAGCCTGCAACGCAGTACAATCCCTGGGTC +
Preference number: 6 (lower is better)
Translates to: HELKTLAGRKVK*QKPATQYNPWV
Trigger: GACCCAGGGATTGTACTGCGTTGCAGGCTTCTGCCATTTGACCTTCCTGCCTGCCAGGGTTTTGAGTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS CAA 72 bp TTGAAACCAAGGATCTCCAGCATGTTCTCGGCTGCATaGCGCTTGGCCACCTTCTTGTTGGTGCCCGTTCCT +
Preference number: 6 (lower is better)
Translates to: LKPRISSMFSAA*RLATFLLVPVP
Trigger: AGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 72 bp AACAACTCTCGGGCTATCATGGCAGTTACCGTGGCCTaGGCAGGATTCGGAGCTGCCCTGGTAAAATCTTTG +
Preference number: 6 (lower is better)
Translates to: NNSRAIMAVTVA*AGFGAALVKSL
Trigger: CAAAGATTTTACCAGGGCAGCTCCGAATCCTGCCAAGGCCACGGTAACTGCCATGATAGCCCGAGAGTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CAA 90 bp ACTTTGAAACCAAGGATCTCCAGCATGTTCTCGGCTGCATTGCGCTaGGCCACCTTCTTGTTGGTGCCCGTTCCTTCTGCAGTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: TLKPRISSMFSAALR*ATFLLVPVPSAVWF
Trigger: AAACCACACTGCAGAAGGAACGGGCACCAACAAGAAGGTGGCCAAGCGCAATGCAGCCGAGAACATGCTGGAGATCCTTGGTTTCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS GCA 72 bp TGTTATTCTTTAAAATGGTCTCGGCTGTGGGCGAGGTaGCCCCATACAACAACTCTCGGGCTATCATGGCAG +
Preference number: 6 (lower is better)
Translates to: CYSLKWSRLWAR*PHTTTLGLSWQ
Trigger: CTGCCATGATAGCCCGAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCGAGACCATTTTAAAGAATAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS CCA 72 bp CTGAAGAGATGTTATTCTTTAAAATGGTCTCGGCTGTaGGCGAGGTGCCCCCATACAACAACTCTCGGGCTA +
Preference number: 6 (lower is better)
Translates to: LKRCYSLKWSRL*ARCPHTTTLGL
Trigger: TAGCCCGAGAGTTGTTGTATGGGGGCACCTCGCCCACAGCCGAGACCATTTTAAAGAATAACATCTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
CDS TCA 72 bp GAGAAGAGACTGGTTCTTGTTCAGTATTTGGCTCCCTaGGAGAGCAGCAGATGGGTTCTGAACTTGCACTTG +
Preference number: 6 (lower is better)
Translates to: EKRLVLVQYLAP*ESSRWVLNLHL
Trigger: CAAGTGCAAGTTCAGAACCCATCTGCTGCTCTCTCAGGGAGCCAAATACTGAACAAGAACCAGTCTCTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS CCA 72 bp GGGGATAAGCACCTCCTCTCATGTTGTAGTTATAGGTaGACTGCATCCGAGAGTAAGGGTCAACAGGCTTAT +
Preference number: 6 (lower is better)
Translates to: GDKHLLSCCSYR*TASESKGQQAY
Trigger: ATAAGCCTGTTGACCCTTACTCTCGGATGCAGTCCACCTATAACTACAACATGAGAGGAGGTGCTTATCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
ENST00000437404.2
ENST00000456866.2
CDS CAA 72 bp CAGAAGCCTGCAACGCAGTACAATCCCTGGGTCATCTaGGTGATTGTCTCATGGATAAATGCTGAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: QKPATQYNPWVI*VIVSWINAEGE
Trigger: TTCCCCTTCAGCATTTATCCATGAGACAATCACCAAGATGACCCAGGGATTGTACTGCGTTGCAGGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS CCA 72 bp GTCAAATGGCAGAAGCCTGCAACGCAGTACAATCCCTaGGTCATCTTGGTGATTGTCTCATGGATAAATGCT +
Preference number: 6 (lower is better)
Translates to: VKWQKPATQYNP*VILVIVSWINA
Trigger: AGCATTTATCCATGAGACAATCACCAAGATGACCCAGGGATTGTACTGCGTTGCAGGCTTCTGCCATTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS CAA 90 bp GTCAAATGGCAGAAGCCTGCAACGCAGTACAATCCCTGGGTCATCTaGGTGATTGTCTCATGGATAAATGCTGAAGGGGAAAAAGCTTTT +
Preference number: 6 (lower is better)
Translates to: VKWQKPATQYNPWVI*VIVSWINAEGEKAF
Trigger: AAAAGCTTTTTCCCCTTCAGCATTTATCCATGAGACAATCACCAAGATGACCCAGGGATTGTACTGCGTTGCAGGCTTCTGCCATTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS TCA 72 bp GTGGATGTAATAGATGCAGAGGGTAAAGCAGAGTTTTaGATGGGTCTACCTGCATTTTCAGAGGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: VDVIDAEGKAEF*MGLPAFSEGRE
Trigger: CTCTCTGCCCTCTGAAAATGCAGGTAGACCCATTCAAAACTCTGCTTTACCCTCTGCATCTATTACATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371856.7
CDS GCA 72 bp CATCAGGACATCAGGGGTCTCCTTTATTATATGTTCTaGAGTCCATCAGGCTACTCATTTAAGTACAAACAA +
Preference number: 6 (lower is better)
Translates to: HQDIRGLLYYMF*SPSGYSFKYKQ
Trigger: TTGTTTGTACTTAAATGAGTAGCCTGATGGACTGCAGAACATATAATAAAGGAGACCCCTGATGTCCTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456866.2
CDS GCA 72 bp GGCCACCTCGAAATTCACAGGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACTTATTTCAGATTTATT +
Preference number: 6 (lower is better)
Translates to: GHLEIHRQVPFK*NLKHLTYFRFI
Trigger: AATAAATCTGAAATAAGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATTTCGAGGTGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371856.7
CDS CAA 90 bp CTCGAAATTCACAGGCAAGTTCCGTTTAAGTGCAATCTCAAACACTaGACTTATTTCAGATTTATTGAGATTTTCTTCTTCGGATTCTCT +
Preference number: 6 (lower is better)
Translates to: LEIHRQVPFKCNLKH*TYFRFIEIFFFGFS
Trigger: AGAGAATCCGAAGAAGAAAATCTCAATAAATCTGAAATAAGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATTTCGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340954.11
ENST00000347458.9
ENST00000360426.8
ENST00000371792.5
ENST00000371802.5
ENST00000371828.7
ENST00000371856.7
ENST00000437404.2
CDS GCA 72 bp GAAAGACTCGAAATTCACAGGCAAGTTCCGTTTAAGTaGAATCTCAAACACTTGACTTATTTCAGATTTATT +
Preference number: 6 (lower is better)
Translates to: ERLEIHRQVPFK*NLKHLTYFRFI
Trigger: AATAAATCTGAAATAAGTCAAGTGTTTGAGATTGCACTTAAACGGAACTTGCCTGTGAATTTCGAGTCTTTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371802.5
ENST00000371828.7
ENST00000437404.2