RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STAT6 (Homo sapiens)

Ensembl gene IDs: ENSG00000166888

Ensembl transcript IDs: ENST00000300134.8, ENST00000454075.7, ENST00000537215.6, ENST00000538913.6, ENST00000543873.6, ENST00000553275.1, ENST00000553397.5, ENST00000553499.5, ENST00000553533.2, ENST00000554202.1, ENST00000554663.5, ENST00000554764.6, ENST00000555104.5, ENST00000555222.5, ENST00000555318.1, ENST00000555641.1, ENST00000555849.5, ENST00000556155.5, ENST00000556259.5, ENST00000557563.5, ENST00000557635.5, ENST00000557781.5, ENST00000640254.2, ENST00000651176.1

Found 1456 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACACTCAGCTCCCGCGCCTGCTTCTCTGTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTGGGGCCCCCAGGAACCTCAAGCCCA +
Preference number: 1 (lower is better)
Translates to: AHSAPAPASLSPCRP*PAEAWLGPPGTSSP
Trigger: TGGGCTTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAGTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 90 bp GGTGACGAGGGTTCTCAGGACTTCATCCAGCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGCCCCTACCTC +
Preference number: 1 (lower is better)
Translates to: GDEGSQDFIQPASQR*PGLGLKLPTSRPYL
Trigger: GAGGTAGGGGCGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGGATGAAGTCCTGAGAACCCTCGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp CTGCTTCTCTGTCACCATGTCGGCCCTGACCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAAGCCCAACAGGAATCGAACTCCAGC +
Preference number: 1 (lower is better)
Translates to: LLLCHHVGPDQRRLG*GPQEPQAQQESNSS
Trigger: GCTGGAGTTCGATTCCTGTTGGGCTTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGACAGAGAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp ATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTaGAGGGCCACATGGCCAGGCCTGGACCCAGACTCTCACCCTGGC +
Preference number: 1 (lower is better)
Translates to: MGQQKRCSRQGPLIH*RATWPGLDPDSHPG
Trigger: GCCAGGGTGAGAGTCTGGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR GCA 90 bp AGTGGGGCCAGGCTCTCCTCAAACGGTGCGCCATTCCCTGCCAGCTaGTGCTGCCGTTTCCAAATCTGGATCCTCTTCAGCACTAGGGCT +
Preference number: 1 (lower is better)
Translates to: SGARLSSNGAPFPAS*CCRFQIWILFSTRA
Trigger: AGCCCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGCCTGGCCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 90 bp CTGAGGCTGTTGTCATTGAAGATCTTCTGGGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGGTTGGTCCCCACCTCAGCCATGAAC +
Preference number: 1 (lower is better)
Translates to: LRLLSLKIFWARKRK*SGSSPRLVPTSAMN
Trigger: GTTCATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 90 bp CCCTTCTGCAGGGCTTCTCGGAGAAGGTGGATCTCCCCTACTCGGTaGTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGC +
Preference number: 1 (lower is better)
Translates to: PFCRASRRRWISPTR*CSLRKPVLNLSSSC
Trigger: GCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGCCCTGCAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp CGGTCCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTaGATGTTCTCTATCTGTGGAGAGCCATCCTGGCCCCGGATGACA +
Preference number: 1 (lower is better)
Translates to: RSPSERMDRSLAENG*MFSICGEPSWPRMT
Trigger: TGTCATCCGGGGCCAGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 90 bp CTCCGGAGACAGCGTTTGGTGAGGTCCAGGACACCATCAAACCACTaGCAAAAGGTGAAGCCACGGCCCAGCAGGATCTCCTTGTTGAAC +
Preference number: 1 (lower is better)
Translates to: LRRQRLVRSRTPSNH*QKVKPRPSRISLLN
Trigger: GTTCAACAAGGAGATCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp GCTGCTGCCGTTTCCAAATCTGGATCCTCTTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAGTGGTCTCCTGCAGTAGCATGGCCA +
Preference number: 1 (lower is better)
Translates to: AAAVSKSGSSSALGL*LPLALQWSPAVAWP
Trigger: TGGCCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCCTTA +
Preference number: 1 (lower is better)
Translates to: SVQSRSVGVVEELSL*VLPPAGITNWGWPL
Trigger: TAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR TCA 90 bp GGCTCCGGAAAGCCTCATCCTTGGGCTTCTTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGATTCGGTCCCCCAGTGAGCGAATGG +
Preference number: 1 (lower is better)
Translates to: GSGKPHPWASWDRDF*AEQDPGFGPPVSEW
Trigger: CCATTCGCTCACTGGGGGACCGAATCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCCGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 90 bp GCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCAGTCAGTaGTGGAAGGAGGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: ACWGVSQSLNFPSSQ*WKEVGRGMIERKEW
Trigger: CCACTCCTTCCTTTCTATCATTCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR GCA 90 bp TTCTGCAGGGCTTCTCGGAGAAGGTGGATCTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTC +
Preference number: 1 (lower is better)
Translates to: FCRASRRRWISPTRC*SLRKPVLNLSSSCF
Trigger: GAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGCCCTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp CTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCAT +
Preference number: 1 (lower is better)
Translates to: LSLWVLPPAGITNWG*PLGPCGTLRSQIAH
Trigger: ATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CCA 90 bp TGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATT +
Preference number: 1 (lower is better)
Translates to: CGGSRRAVSLGSPSS*DHQLGLALRSMWDI
Trigger: AATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CCA 90 bp CAAGATCCCGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAGAGCCATCCT +
Preference number: 1 (lower is better)
Translates to: QDPGFGPPVSEWTGL*QRMAGCSLSVESHP
Trigger: AGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 90 bp GAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATT +
Preference number: 1 (lower is better)
Translates to: EELSLWVLPPAGITN*GWPLGPCGTLRSQI
Trigger: AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR GCA 90 bp TATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCT +
Preference number: 1 (lower is better)
Translates to: YPLSLASSVNVSVCS*LSVLGPGSEWAEKP
Trigger: AGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR GCA 90 bp CGGTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTaGTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATA +
Preference number: 1 (lower is better)
Translates to: RCCSLRKPVLNLSSS*FQWKGIGKWRNCSI
Trigger: TATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
3UTR CCA 90 bp GGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCACTTaGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGG +
Preference number: 1 (lower is better)
Translates to: GSIGGVEPYVDVTAT*THLGTVRLQIQSIW
Trigger: CCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CCA 90 bp CATTCCAAGGTCATAAGAAGGCACCATGGTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTCCCTTTCCACGGTCATCTTGATGGT +
Preference number: 1 (lower is better)
Translates to: HSKVIRRHHGRHLEL*GRKWLVPFHGHLDG
Trigger: ACCATCAAGATGACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGTGCCTTCTTATGACCTTGGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR TCA 90 bp ATAGAGATTTTTGAGCTGAGCAAGATCCCGGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTC +
Preference number: 1 (lower is better)
Translates to: IEIFELSKIPDSVPQ*ANGQVFGREWLDVL
Trigger: GAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATCTTGCTCAGCTCAAAAATCTCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 90 bp TCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTaGTGCTGTCTTCTGTGCAGTGTCTCACCCTCCCAAATTTGTGTT +
Preference number: 1 (lower is better)
Translates to: SEYLGVSICQRGQHT*CCLLCSVSPSQICV
Trigger: AACACAAATTTGGGAGGGTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CCA 90 bp AGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTTTT +
Preference number: 1 (lower is better)
Translates to: SLRKPVLNLSSSCFQ*KGIGKWRNCSITAF
Trigger: AAAAGCTGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
3UTR CAA 90 bp GTTCTCAGGACTTCATCCAGCCGGCCAGTCAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCAGCCGCCCCTACCTCCTGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: VLRTSSSRPVSDARV*GSSSPPAAPTSCCS
Trigger: GCTACAGCAGGAGGTAGGGGCGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGGATGAAGTCCTGAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 90 bp CGCGCCTGCTTCTCTGTCACCATGTCGGCCCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAACCTCAAGCCCAACAGGAATCGAACT +
Preference number: 2 (lower is better)
Translates to: RACFSVTMSALTSGG*AGAPRNLKPNRNRT
Trigger: AGTTCGATTCCTGTTGGGCTTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGACAGAGAAGCAGGCGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR GCA 90 bp GGGTTCTCAGGACTTCATCCAGCCGGCCAGTCAGCGATGCCCGGGTCTTGGGCTTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GFSGLHPAGQSAMPGSWASPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...AGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGGATGAAGTCCTGAGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR GCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR TCA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR TCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGCCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 2 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCGGCCCTGGGTCAGAATaGGCGGAGAAGCCTTCCATG +
Preference number: 2 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHAGPGSE*AEKPSM
Trigger: CATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCC...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 2 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp CTTTCACACCTCTCCTGGAGTGGGGCCAGGCTCTCCTCAAACGGTGCGCCATTCGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LSHLSWSGARLSSNGAPFVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...GAATGGCGCACCGTTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGGGAGTGAAGGGAAGCTaGCGGTGGATGGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: VLPPAGITNWGWPLGPCGGVKGS*RWMGQQ
Trigger: CTGTTGCCCCATCCACCGCCAGCTTCCCTTCACTCC...CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651176.1
3UTR CAA 90 bp GCTGGGATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATaGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCAGGAGGGGCT +
Preference number: 2 (lower is better)
Translates to: AGITNWGWPLGPCGT*RSQIAHSGRAAGGA
Trigger: AGCCCCTCCTGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR TCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTCCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 2 (lower is better)
Translates to: AASHSPRAETQYPLSLASPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 2 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATTCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHSRPLL*SHPGSL
Trigger: AAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGA...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp CCCCCAGGAACCTCAAGCCCAACAGGAATCGAACTCCAGCCTGGAACTTGGTCTGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: PPGTSSPTGIELQPGTWSASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...AGACCAAGTTCCAGGCTGGAGTTCGATTCCTGTTGGGCTTGAGGTTCCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR TCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCT +
Preference number: 2 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPVSVCS*LSVLGP
Trigger: AGGGCCTAGGACGGATAGGCAGGAACATACAGACAC...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: CALQVQACWGVSQSLNFPSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR TCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACCCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 2 (lower is better)
Translates to: AYVREASTLAAVFCAVSHPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 2 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTATGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTAGGATCTATGACCCCTaGCTTGAGAGGGAGAATGGG +
Preference number: 2 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPRIYDP*LERENG
Trigger: CCCATTCTCCCTCTCAAGGCAGGGGTCATAGATCCT...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
3UTR-3UTR CCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: HPGSLELLPIPLGLRPNISPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 2 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTASEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp TGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 2 (lower is better)
Translates to: CGGSRRAVSLGSPSSWDHLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...GTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 90 bp TGCTGCTGCCGTTTCCAAATCTGGATCCTCTTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCAGTGGTCTCCTGCAGTAGCATGGCC +
Preference number: 2 (lower is better)
Translates to: CCCRFQIWILFSTRA*AASSSPVVSCSSMA
Trigger: GGCCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 90 bp GCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCA +
Preference number: 2 (lower is better)
Translates to: AVSLGSPSSWDHQLG*ALRSMWDIEIPDCP
Trigger: TGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: KCPEQVCGGSRRAVS*GSPSSWDHQLGLAL
Trigger: AAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR TCA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCACTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAALLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 2 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 2 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCACGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 2 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCT +
Preference number: 2 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHVSVCS*LSVLGP
Trigger: AGGGCCTAGGACGGATAGGCAGGAACATACAGACAC...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp GTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 2 (lower is better)
Translates to: VLPPAGITNWGWPLGPCGTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GATCCCGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: DPGFGPPVSEWTGLWQRMEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...CATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 90 bp GCAAGATCCCGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAGAGCCATCC +
Preference number: 2 (lower is better)
Translates to: ARSRIRSPSERMDRS*AENGWMFSICGEPS
Trigger: GGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 2 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTAWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 2 (lower is better)
Translates to: CALQVQACWGVSQSLNFPIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp GGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTATCCGTCCTAGGCCCTaGGTCAGAATGGGCGGAGAA +
Preference number: 2 (lower is better)
Translates to: GVSICQRGQHTCCCLLCSIRPRP*VRMGGE
Trigger: TTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGAT...ACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACGCTCCCAGGCAGCATTaGAGGTGTGGAGCCATACGT +
Preference number: 2 (lower is better)
Translates to: AYVREASTLAAVFCAVSHAPRQH*RCGAIR
Trigger: ACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGC...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 2 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHAKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp CTTTCACACCTCTCCTGGAGTGGGGCCAGGCTCTCCTCAAACGGTGCGCCATTCTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 2 (lower is better)
Translates to: LSHLSWSGARLSSNGAPFCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...GAATGGCGCACCGTTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCAACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAATPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GTTCCGTCGGGCTCATTGAGAAGAAGGCTAGTAACGTACTGTTTGCTGATGAAGCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 2 (lower is better)
Translates to: VPSGSLRRRLVTYCLLMKQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...CTTCATCAGCAAACAGTACGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR TCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR TCA 90 bp GTCTTTGGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAGAGCCATCCTGGCCCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 2 (lower is better)
Translates to: VFGREWLDVLYLWRAILAPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...GGCCAGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR TCA 90 bp ACAGAACGGTGCTGGAAGGCCTCCATACTGAGGCTGTTGTCATTGAAGATCTTCGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 2 (lower is better)
Translates to: TERCWKASILRLLSLKIFGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...GAAGATCTTCAATGACAACAGCCTCAGTATGGAGGCCTTCCAGCACCGTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR TCA 90 bp GTCTTTGGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAGAGCCATCCTGGCCGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 2 (lower is better)
Translates to: VFGREWLDVLYLWRAILAGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...GGCCAGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR TCA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 2 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQIPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 2 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 2 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 2 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQITLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 2 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCATGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACAGCCCTTGTACTTTTaGATAGTCTCATACACGTAT +
Preference number: 2 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGQPLYF*IVSYTY
Trigger: ATACGTGTATGAGACTATGCAAAAGTACAAGGGCTG...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp ACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAGAGCCATCCTCCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: TGLWQRMAGCSLSVESHPPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...AGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 2 (lower is better)
Translates to: GWPLGPCGTLRSQIAHSGPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...CCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 2 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GTCTTTGGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAGAGCCATCCTGGCCGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 2 (lower is better)
Translates to: VFGREWLDVLYLWRAILADTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...GGCCAGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 2 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGACGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 2 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCAGCCCTTGTACTTTTaGATAGTCTCATACACGTAT +
Preference number: 2 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLQPLYF*IVSYTY
Trigger: ATACGTGTATGAGACTATGCAAAAGTACAAGGGCTG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTGCTCCCAGGCAGCATTaGAGGTGTGGAGCCATACGT +
Preference number: 2 (lower is better)
Translates to: LAYVREASTLAAVFCAVSAPRQH*RCGAIR
Trigger: ACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGC...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCACCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 90 bp GGAGGTGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTaGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCA +
Preference number: 2 (lower is better)
Translates to: GGVEPYVDVTATWTH*GTVRLQIQSIWGLA
Trigger: TGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR TCA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 2 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSEVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp GAGACCCAATATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ETQYPLSLASSVNVSVCSVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...GGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATATTGGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR GCA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTAGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LAYVREASTLAAVFCAVSEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR CAA 90 bp CACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTaGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGT +
Preference number: 2 (lower is better)
Translates to: HLDPLGHSQTPNSEY*GVSICQRGQHTCCC
Trigger: ACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 90 bp AGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCACTaGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTG +
Preference number: 2 (lower is better)
Translates to: RQHWRCGAIRRCHSH*DPLGHSQTPNSEYL
Trigger: CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGATGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCGGAGAAGCCTTCCATaGCCTAACCTGTGCTCTTAC +
Preference number: 2 (lower is better)
Translates to: LAYVREASTLAAVFCAVSRRSLP*PNLCSY
Trigger: GTAAGAGCACAGGTTAGGGCATGGAAGGCTTCTCCG...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp GAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCGGAGAAGCCTTCCATaGCCTAACCTGTGCTCTTAC +
Preference number: 2 (lower is better)
Translates to: EYLGVSICQRGQHTCCCLRRSLP*PNLCSY
Trigger: GTAAGAGCACAGGTTAGGGCATGGAAGGCTTCTCCG...AAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR GCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGATCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTT +
Preference number: 2 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRSRPLL*SHPGSL
Trigger: AAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGA...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 2 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGGCCCTGGGTCAGAATaGGCGGAGAAGCCTTCCATG +
Preference number: 2 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRGPGSE*AEKPSM
Trigger: CATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCC...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTGAAGCTGGCGGTGGATaGGGCAACAGAAAAGATGCA +
Preference number: 2 (lower is better)
Translates to: LAYVREASTLAAVFCAVSEAGGG*GNRKDA
Trigger: TGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTC...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 90 bp ATCTCTGAGTCGCTGAAGCGGAGGAGAAAGGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACGTACTGTTTGCTGATGAAGCCAATG +
Preference number: 2 (lower is better)
Translates to: ISESLKRRRKVPSGS*RRRLVTYCLLMKPM
Trigger: CATTGGCTTCATCAGCAAACAGTACGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAACCTTTCTCCTCCGCTTCAGCGACTCAGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 2 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CCA 90 bp GCAGTGTCTCACCCTCCCAAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 2 (lower is better)
Translates to: AVSHPPKFVLSRRQKQIDSEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...GTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 2 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHSEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR TCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR GCA 90 bp AAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCAGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 2 (lower is better)
Translates to: KFVLSRRQKQIDTCSMWSVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 2 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 2 (lower is better)
Translates to: HSYTRRISALVLLHSLIHPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 90 bp CTTGCTGCTGTCTTCTGTGCAGTGTCTCACCCTCCCAAATTTGTGTaGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCA +
Preference number: 2 (lower is better)
Translates to: LAAVFCAVSHPPKFV*SRRQKQIDTCSMWS
Trigger: TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGCACAGAAGACAGCAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR TCA 90 bp TGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTTTTCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: CFQWKGIGKWRNCSITAFLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...AAAAGCTGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
3UTR CAA 90 bp ACACGTTCACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTaGCATAGTCTCATACACGTATCAGAAGCCTCCACCTGGCTAACA +
Preference number: 2 (lower is better)
Translates to: TRSHSYTRRISALVL*HSLIHVSEASTWLT
Trigger: TGTTAGCCAGGTGGAGGCTTCTGATACGTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTGAACGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR CAA 90 bp AGGTACATACACGTTCACACAGCTATACACGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCATACACGTATCAGAAGCCTCCACCT +
Preference number: 2 (lower is better)
Translates to: RYIHVHTAIHEESQP*YFCIVSYTYQKPPP
Trigger: AGGTGGAGGCTTCTGATACGTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTGAACGTGTATGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR GCA 72 bp GGTTCTCAGGACTTCATCCAGCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGC +
Preference number: 3 (lower is better)
Translates to: GSQDFIQPASQR*PGLGLKLPTSR
Trigger: GCGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGGATGAAGTCCTGAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp TGTCACCATGTCGGCCCTGACCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAAGCCCAACAGGAATCG +
Preference number: 3 (lower is better)
Translates to: CHHVGPDQRRLG*GPQEPQAQQES
Trigger: CGATTCCTGTTGGGCTTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCCCCACCCAGGGTCCCTaGAGCTGCTTCCCATTCCCC +
Preference number: 3 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTAPTQGP*SCFPFP
Trigger: GGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGG...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGAGCCACTTGGACCCACTaGGGCACAGTCAGACTCCAA +
Preference number: 3 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGATWTH*GTVRLQ
Trigger: TTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp TCTGAGTCGCTGAAGCGGAGGAGAAAGGTTCCGTCGGGCTCATTGAGAAGAAGGCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: SESLKRRRKVPSGSLRRRLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...CCTTCTTCTCAATGAGCCCGACGGAACCTTTCTCCTCCGCTTCAGCGACTCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 72 bp AGGGCTTTGGCTGCCTCTAGCTCTCCAGTGGTCTCCTaGAGTAGCATGGCCAGGGCCTCACTTGGCCCAGTC +
Preference number: 3 (lower is better)
Translates to: RALAASSSPVVS*SSMARASLGPV
Trigger: GACTGGGCCAAGTGAGGCCCTGGCCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGGCAGCCAAAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTAGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 3 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR TCA 72 bp CCTGGAGCTGGATGGGGAGTTTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCACAGCGCACTTCTCCT +
Preference number: 3 (lower is better)
Translates to: PGAGWGVCRGQV*SWQRRAQRTSP
Trigger: AGGAGAAGTGCGCTGTGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp TGTGCGTGCGTGTGCGCGCTGCAGGTGCAGGCATGTTaGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCAGT +
Preference number: 3 (lower is better)
Translates to: CACVCALQVQAC*GVSQSLNFPSS
Trigger: ACTGGAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCACGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHARRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: AASHSPRAETQYPLSLASLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: CALQVQACWGVSQSLNFPKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR TCA 72 bp GCCGGTCAGACCAGTAGCTCCGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAAACCACTGCCAAAAGG +
Preference number: 3 (lower is better)
Translates to: AGQTSSSGDSVW*GPGHHQTTAKR
Trigger: CCTTTTGGCAGTGGTTTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAGCTACTGGTCTGACCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 72 bp TTGTCATTGAAGATCTTCTGGGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGGTTGGTCCCCACCTCA +
Preference number: 3 (lower is better)
Translates to: LSLKIFWARKRK*SGSSPRLVPTS
Trigger: TGAGGTGGGGACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGCCCAGAAGATCTTCAATGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp TGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGGACATTGAGATCCCAG +
Preference number: 3 (lower is better)
Translates to: WVLPPAGITNWG*PLGPCGTLRSQ
Trigger: CTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCACTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAALPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 3 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAESSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 72 bp AGGGCTTCTCGGAGAAGGTGGATCTCCCCTACTCGGTaGTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGT +
Preference number: 3 (lower is better)
Translates to: RASRRRWISPTR*CSLRKPVLNLS
Trigger: ACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp TGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTaGGTCAGAATGGGCGGAGAAGCCTTCCATGCCCTA +
Preference number: 3 (lower is better)
Translates to: CVCMFLPIRPRP*VRMGGEAFHAL
Trigger: TAGGGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR CCA 72 bp TTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTaGCTGGCTCAGGCAGCTGTCTTCCACCATGGTCAC +
Preference number: 3 (lower is better)
Translates to: FTNPSALRKRCH*LAQAAVFHHGH
Trigger: GTGACCATGGTGGAAGACAGCTGCCTGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CCA 72 bp AGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGT +
Preference number: 3 (lower is better)
Translates to: SRSVGVVEELSL*VLPPAGITNWG
Trigger: ACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp CCCCCAGGAACCTCAAGCCCAACAGGAATCGAACTCCAGCCTGGAACTTGGTCTAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: PPGTSSPTGIELQPGTWSKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...AGACCAAGTTCCAGGCTGGAGTTCGATTCCTGTTGGGCTTGAGGTTCCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR TCA 72 bp TTTGAGCTGAGCAAGATCCCGGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTTGGCAGAGAATGGCTG +
Preference number: 3 (lower is better)
Translates to: FELSKIPDSVPQ*ANGQVFGREWL
Trigger: CAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATCTTGCTCAGCTCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 72 bp ACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATT +
Preference number: 3 (lower is better)
Translates to: TCTSNHMSRPLL*SHPGSLELLPI
Trigger: AATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR GCA 72 bp GCTTCTCGGAGAAGGTGGATCTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: ASRRRWISPTRC*SLRKPVLNLSS
Trigger: AGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp TCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGA +
Preference number: 3 (lower is better)
Translates to: SLWVLPPAGITN*GWPLGPCGTLR
Trigger: TCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CCA 72 bp AGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTGGCCCTTAGGTCCATG +
Preference number: 3 (lower is better)
Translates to: SRRAVSLGSPSS*DHQLGLALRSM
Trigger: CATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CCA 72 bp GGAGGTGTGGAGCCATACGTAGATGTCACAGCCACTTaGACCCACTTGGGCACAGTCAGACTCCAAATTCAG +
Preference number: 3 (lower is better)
Translates to: GGVEPYVDVTAT*THLGTVRLQIQ
Trigger: CTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CCA 72 bp AGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTaGATGTTCTCTATCTGTGGAGAGCCATCCTGGCCC +
Preference number: 3 (lower is better)
Translates to: SERMDRSLAENG*MFSICGEPSWP
Trigger: GGGCCAGGATGGCTCTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp GGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGTTCTCTATCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: GFGPPVSEWTGL*QRMAGCSLSVE
Trigger: CTCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp GTCATAAGAAGGCACCATGGTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTCCCTTTCCACGGTCAT +
Preference number: 3 (lower is better)
Translates to: VIRRHHGRHLEL*GRKWLVPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGTGCCTTCTTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSERRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp TCTGAGTCGCTGAAGCGGAGGAGAAAGGTTCCGTCGGGCTCATTGAGAAGAAGGATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 3 (lower is better)
Translates to: SESLKRRRKVPSGSLRRRISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...CCTTCTTCTCAATGAGCCCGACGGAACCTTTCTCCTCCGCTTCAGCGACTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR TCA 72 bp AAGCCTCATCCTTGGGCTTCTTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGATTCGGTCCCCCAGTG +
Preference number: 3 (lower is better)
Translates to: KPHPWASWDRDF*AEQDPGFGPPV
Trigger: CACTGGGGGACCGAATCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCAAGAAGCCCAAGGATGAGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR GCA 72 bp TGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTaGAGTGTCTCACCCTCCCAAATTTGTGTTGTCACG +
Preference number: 3 (lower is better)
Translates to: CQRGQHTCCCLL*SVSPSQICVVT
Trigger: CGTGACAACACAAATTTGGGAGGGTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR GCA 72 bp AGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTaGTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAAC +
Preference number: 3 (lower is better)
Translates to: SLRKPVLNLSSS*FQWKGIGKWRN
Trigger: GTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
3UTR CCA 72 bp GTTTCCAAATCTGGATCCTCTTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAGTGGTCTCCTGCAGTA +
Preference number: 3 (lower is better)
Translates to: VSKSGSSSALGL*LPLALQWSPAV
Trigger: TACTGCAGGAGACCACTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAAGAGGATCCAGATTTGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CCA 72 bp TGGTTGGTCCCTTTCCACGGTCATCTTGATGGTAGCTaGGACATAACCCCTGCCATCCTTACCCATCTGTTC +
Preference number: 3 (lower is better)
Translates to: WLVPFHGHLDGS*DITPAILTHLF
Trigger: GAACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAGCTACCATCAAGATGACCGTGGAAAGGGACCAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 3 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR-3UTR CAA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 3 (lower is better)
Translates to: HSYTRRISALVLLHSLIHSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp GATCCCGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 3 (lower is better)
Translates to: DPGFGPPVSEWTGLWQRMKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...CATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAAAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LKLEFFLLPVERHWQVAERRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR-3UTR CAA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGCTCACCCTCCCAAATTaGTGTTGTCACGTAGGCAAA +
Preference number: 3 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGLTLPN*CCHVGK
Trigger: TTTGCCTACGTGACAACACAAATTTGGGAGGGTGAG...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CCA 72 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTaGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTT +
Preference number: 3 (lower is better)
Translates to: GGQGNDRKEGVD*LHPLCILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR-3UTR CAA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACGAGAGGCCAGCACACTaGCTGCTGTCTTCTGTGCAG +
Preference number: 3 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYERPAH*LLSSVQ
Trigger: CTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTC...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp TGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCACTGGCTAACAGGAATTaGGGGCTTTGGGAGATTTTT +
Preference number: 3 (lower is better)
Translates to: WTHLGTVRLQIQSIWGLALANRN*GLWEIF
Trigger: AAAAATCTCCCAAAGCCCCAAATTCCTGTTAGCCAG...TGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTTCAGCCCTTGTACTTTaGCATAGTCTCATACACGTA +
Preference number: 3 (lower is better)
Translates to: LAYVREASTLAAVFCAVSSALVL*HSLIHV
Trigger: TACGTGTATGAGACTATGCAAAAGTACAAGGGCTGA...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp AGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTCAGCCCTTGTACTTTaGCATAGTCTCATACACGTA +
Preference number: 3 (lower is better)
Translates to: SIWGLAYVREASTLAAVFSALVL*HSLIHV
Trigger: TACGTGTATGAGACTATGCAAAAGTACAAGGGCTGA...GAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp GAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCA +
Preference number: 3 (lower is better)
Translates to: EYLGVSICQRGQHTCCCLEESQP*YFCIVS
Trigger: TGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTC...AAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGCCAAATTCAGAGTATTaGGGGGTTAGCATATGTCAG +
Preference number: 3 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLPNSEY*GVSICQ
Trigger: CTGACATATGCTAACCCCCAAATACTCTGAATTTGG...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR-3UTR CAA 90 bp GTTCCGTCGGGCTCATTGAGAAGAAGGCTAGTAACGTACTGTTTGCTGATGAAGAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 3 (lower is better)
Translates to: VPSGSLRRRLVTYCLLMKKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...CTTCATCAGCAAACAGTACGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp CCAGTCAGCGATGCCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGCCCCTACCGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PVSDARVLGSSSPPAAPTASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...GGTAGGGGCGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAGTCAGCGATGCCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGCCCCTACCTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PVSDARVLGSSSPPAAPTCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...GGTAGGGGCGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHALQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGCCGGCCAGTCAGCGATGCCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PAGQSAMPGSWAQAPHQPASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...CGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAGCCGGCCAGTCAGCGATGCCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: PAGQSAMPGSWAQAPHQPGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...CGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCGGCCCTGGGTCAGAATaGGCGGAGAAGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPGPGSE*AEKPSM
Trigger: CATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCC...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGACCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTADTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGATGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTCCTGCTGCTGCCCCTaGTCTCAGCTCTGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWSCCCP*SQLWSR
Trigger: CCGCGACCAGAGCTGAGAGCAGGGGCAGCAGCAGGA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLRNSQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCGATGTCACAGCCACTTaGACCCACTTGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPDVTAT*THLGTV
Trigger: GACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATC...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCCACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHAALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACCTGGGACTTGGAGGTTaGCCCTCCTGCTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNLGLGG*PSCSGS
Trigger: GGAACCTGAGCAGGAGGGGCAACCTCCAAGTCCCAG...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPRNSQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR CAA 72 bp GTGTGCGTGCGTGTGCGCGCTGCAGGTGCAGGCATGTaGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VCVRVRAAGAGM*GCVSEPELPFQ
Trigger: CTGGAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCACGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGCCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTATTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTALSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CCCCCAGGAACCTCAAGCCCAACAGGAATCGAACTCCAGCCTGGAACTTGGTCTGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: PPGTSSPTGIELQPGTWSARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...AGACCAAGTTCCAGGCTGGAGTTCGATTCCTGTTGGGCTTGAGGTTCCTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHAASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: AASHSPRAETQYPLSLASGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RAVSLGSPSSWDHQLGLASSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...GGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCGGAGTGAAGGGAAGCTaGCGGTGGATGGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTAGVKGS*RWMGQQ
Trigger: CTGTTGCCCCATCCACCGCCAGCTTCCCTTCACTCC...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTGGAGTGAAGGGAAGCTaGCGGTGGATGGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPGVKGS*RWMGQQ
Trigger: CTGTTGCCCCATCCACCGCCAGCTTCCCTTCACTCC...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHADPTET*SGTWRL
Trigger: CAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTC...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPDPTET*SGTWRL
Trigger: CAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTC...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGCCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSEPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp TTGCCCCTCCAGGAGAAGCTTAGTGAGGTCCTGTTCAGTGGGAGGCAGCAGAGGGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPLQEKLSEVLFSGRQQRDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...CCTCTGCTGCCTCCCACTGAACAGGACCTCACTAAGCTTCTCCTGGAGGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGTTCTCAGGACTTCATCCAGCCGGCCAGTCAGCGATGCCCGGGTCTTGGGCTGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GFSGLHPAGQSAMPGSWAVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...AGCCCAAGACCCGGGCATCGCTGACTGGCCGGCTGGATGAAGTCCTGAGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCAGGGGGTCCCTCTaGTATATGCTCTCGGCAACC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNFRGSL*YMLSAT
Trigger: GGTTGCCGAGAGCATATATCAGAGGGACCCCCTGAA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538913.6
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCATCCCCTTGCAGAGTaGCCAGCCTCCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGHPLAE*PASWHG
Trigger: GCCATGCCAGGAGGCTGGTCACTCTGCAAGGGGATG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR GCA 90 bp CCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCAGGCAGCTGTCTTCCACTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSALRKRCHWLAQAAVFHCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...GTGGAAGACAGCTGCCTGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GWPLGPCGTLRSQIAHSGPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...CCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGTTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: VLPPAGITNWGWPLGPCGFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTAGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCACGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: QLGLALRSMWDIEIPDCPRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...TGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp TTGCCCCTCCAGGAGAAGCTTAGTGAGGTCCTGTTCAGTGGGAGGCAGCAGAGGTCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LPLQEKLSEVLFSGRQQRSRPLL*SHPGSL
Trigger: AAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGA...CCTCTGCTGCCTCCCACTGAACAGGACCTCACTAAGCTTCTCCTGGAGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCCCCGCCGTTGCTCCTaGTGCTGCCCCTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGPRRCS*CCPCSQ
Trigger: CTGAGAGCAGGGGCAGCAGCAGGAGCAACGGCGGGG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGTCAGCGATGCCCGGGTCTTGGGCTCAAGCTCCCCACCAGCCGCCCCTACCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: PVSDARVLGSSSPPAAPTKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GGTAGGGGCGGCTGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHASALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp TTGCCCCTCCAGGAGAAGCTTAGTGAGGTCCTGTTCAGTGGGAGGCAGCAGAGGCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LPLQEKLSEVLFSGRQQRLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...CCTCTGCTGCCTCCCACTGAACAGGACCTCACTAAGCTTCTCCTGGAGGGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGATGTTCTCTATCTGTaGAGAGCCATCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNDVLYL*RAILAP
Trigger: CGGGGCCAGGATGGCTCTCCACAGATAGAGAACATC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCCTCAGCCCCCTTCTGCAGGGCTTCTCGGAGAAGGTGGATCTCCCCTACTCGCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: SLSPLLQGFSEKVDLPYSLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...CGAGTAGGGGAGATCCACCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCAGGCAGCTGTCTTCCACGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PSALRKRCHWLAQAAVFHDPTET*SGTWRL
Trigger: CAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTC...GTGGAAGACAGCTGCCTGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTGCTCTCAAGGGTGCTaGTGTGTTGCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNCSQGC*CVARWC
Trigger: GCACCATCTTGCAACACATCAGCACCCTTGAGAGCA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGCCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCAGCCCCAGGACCCTaGGGCACACTCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSPAPGP*GTLSSR
Trigger: GCGGGAGCTGAGTGTGCCTCAGGGTCCTGGGGCTGG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGACACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GATCCCGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DPGFGPPVSEWTGLWQRMLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...CATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGTTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAEFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: RAVSLGSPSSWDHQLGLALGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...GGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGGGAGGCAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SGRQQRREYVFTNPSALRGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...CCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTGCCTCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGCGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCCGGAGAAGCCTTCCATaGCCTAACCTGTGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPRRSLP*PNLCSY
Trigger: GTAAGAGCACAGGTTAGGGCATGGAAGGCTTCTCCG...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLVSVCS*LSVLGP
Trigger: AGGGCCTAGGACGGATAGGCAGGAACATACAGACAC...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGGATCTATGACCCCTaGCTTGAGAGGGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLRIYDP*LERENG
Trigger: CCCATTCTCCCTCTCAAGGCAGGGGTCATAGATCCT...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCAGTGTAAGCAGTGGCTaGCCCAGCCCGCTGTTTCCG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCSVSSG*PSPLFP
Trigger: CGGAAACAGCGGGCTGGGGCAGCCACTGCTTACACT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGAGGTTGCCCCGCCGTTaGTCCTGCTGCTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLRLPRR*SCCCPC
Trigger: GCAGGGGCAGCAGCAGGAGCAACGGCGGGGCAACCT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR CCA 90 bp AGTGGGAGGCAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: SGRQQRREYVFTNPSALRRNSQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...CCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTGCCTCCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCACAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAAQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCTTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGATGTTCTCTATCTGTaGAGAGCCATCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWDVLYL*RAILAP
Trigger: CGGGGCCAGGATGGCTCTCCACAGATAGAGAACATC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCAGGGGGTCAGGGCTaGACACAGCATGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPAGGQG*TQHAPE
Trigger: CTCAGGAGCATGCTGTGTCCAGCCCTGACCCCCTGC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HPGSLELLPIPLGLRPNIAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGACCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGGCCCTGGGTCAGAATaGGCGGAGAAGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSGPGSE*AEKPSM
Trigger: CATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNSEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCGAAGCTGGCGGTGGATaGGGCAACAGAAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLEAGGG*GNRKDA
Trigger: TGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTC...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGGAGTGAAGGGAAGCTaGCGGTGGATGGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMGVKGS*RWMGQQ
Trigger: CTGTTGCCCCATCCACCGCCAGCTTCCCTTCACTCC...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTTCAGTGTAAGCAGTaGCTGCCCCAGCCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: HPGSLELLPIPLGLRPNILQCKQ*LPQPAV
Trigger: AACAGCGGGCTGGGGCAGCCACTGCTTACACTGAAG...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTGCTCTCAAGGGTGCTaGTGTGTTGCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWCSQGC*CVARWC
Trigger: GCACCATCTTGCAACACATCAGCACCCTTGAGAGCA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTTCAGGGGGTCCCTCTaGTATATGCTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWFRGSL*YMLSRV
Trigger: CACCCTTGAGAGCATATATCAGAGGGACCCCCTGAA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCAGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: QLGLALRSMWDIEIPDCPGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...TGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: RAVSLGSPSSWDHQLGLAAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...GGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HPGSLELLPIPLGLRPNIDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TTGCCCCTCCAGGAGAAGCTTAGTGAGGTCCTGTTCAGTGGGAGGCAGCAGAGGGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LPLQEKLSEVLFSGRQQRDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...CCTCTGCTGCCTCCCACTGAACAGGACCTCACTAAGCTTCTCCTGGAGGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQIDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GWPLGPCGTLRSQIAHSGLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...CCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGCCCTCCCTGGAGCTCTaGCGACACAGAGAAGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAEPSLEL*RHREEK
Trigger: TTTCTCTTCTCTGTGTCGTCAGAGCTCCAGGGAGGG...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR TCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTGGCGGCTATCGACGGTaGGTGAGATTCCGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSGGYRR*VRFRVP
Trigger: GGGGACGCGGAATCTCACTCACCGTCGATAGCCGCC...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR GCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTACTGGGACTTGGAGGTTaGCTCGGCAACCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLLGLGG*LGNPSA
Trigger: AGCAGAGGGGTTGCCGAGGCAACCTCCAAGTCCCAG...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp TGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCTGGGACTTGGAGGTTaGCTCGGCAACCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CGGSRRAVSLGSPSSWDHLGLGG*LGNPSA
Trigger: AGCAGAGGGGTTGCCGAGGCAACCTCCAAGTCCCAG...GTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: HPGSLELLPIPLGLRPNIPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCCGGCCAGTCAGCGATaGCCGGGTCTTGGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLPASQR*PGLGLK
Trigger: CTTGAGCCCAAGACCCGGGCATCGCTGACTGGCCGG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGTTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGCCAGGAAGAGGAAGTaGTCTGGGAGCAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLARKRK*SGSSPR
Trigger: CCGGGGGCTGCTCCCAGAGCACTTCCTCTTCCTGGC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCCTCAGCCCCCTTCTGCAGGGCTTCTCGGAGAAGGTGGATCTCCCCTACTCGACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: SLSPLLQGFSEKVDLPYSTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...CGAGTAGGGGAGATCCACCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSLGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGAATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTTTTCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: CFQWKGIGKWRNCSITAFLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...AAAAGCTGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGGGAGGCAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SGRQQRREYVFTNPSALRVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...CCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTGCCTCCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCGGAGAAGCCTTCCATaGCCTAACCTGTGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFRRSLP*PNLCSY
Trigger: GTAAGAGCACAGGTTAGGGCATGGAAGGCTTCTCCG...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLRNSQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAEPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GWPLGPCGTLRSQIAHSGEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...CCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGAGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGGCAGGGGGTCAGGGCTaGACACAGCATGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQAGGQG*TQHAPE
Trigger: CTCAGGAGCATGCTGTGTCCAGCCCTGACCCCCTGC...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGCAGGGGGTCAGGGCTaGACACAGCATGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLAGGQG*TQHAPE
Trigger: CTCAGGAGCATGCTGTGTCCAGCCCTGACCCCCTGC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTATCCGTCCTAGGCCCTaGGTCAGAATGGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: AASHSPRAETQYPLSLASIRPRP*VRMGGE
Trigger: TTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGAT...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCCACTTGGACCCACTTaGGCACAGTCAGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPPLGPT*AQSDSK
Trigger: TTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGG...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 72 bp GAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGG +
Preference number: 4 (lower is better)
Translates to: EQVCGGSRRAVS*GSPSSWDHQLG
Trigger: CCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRDPTET*SGTWRL
Trigger: CAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GVSICQRGQHTCCCLLCSCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...ACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: AYVREASTLAAVFCAVSHGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: LPIRPRPWVRMGGEAFHAWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...GGCATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGACACAGCATGCTCCTaGGGCTGGCACGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSDTACS*GWHGSR
Trigger: CCTGCTGCCGTGCCAGCCTCAGGAGCATGCTGTGTC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGCTATCGACGGTGAGTaGGATTCCGCGTCCCCCTTG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGAIDGE*DSASPL
Trigger: CAAGGGGGACGCGGAATCTCACTCACCGTCGATAGC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCAGTCACCCAGAAGATaGCGCAGGTGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCQSPRR*RRCWGK
Trigger: CTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAEVSVCS*LSVLGP
Trigger: AGGGCCTAGGACGGATAGGCAGGAACATACAGACAC...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGACCCCAGCCCTTGTACTTTTaGATAGTCTCATACACGTAT +
Preference number: 4 (lower is better)
Translates to: QQAGPSHTLEGHMARPGPQPLYF*IVSYTY
Trigger: ATACGTGTATGAGACTATGCAAAAGTACAAGGGCTG...GGGTCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCGTTGCTCCTGCTGCTaGCCCTGCTCTCAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSRCSCC*PCSQLW
Trigger: CCAGAGCTGAGAGCAGGGGCAGCAGCAGGAGCAACG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGGGACTTGGAGGTTaGCCCGCCGTTGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLGLGG*PAVAPA
Trigger: AGCAGGAGCAACGGCGGGGCAACCTCCAAGTCCCAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLRNSQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: AASHSPRAETQYPLSLASPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGGGAGGCAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SGRQQRREYVFTNPSALRTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...CCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTGCCTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AYVREASTLAAVFCAVSHLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGATGTTCTCTATCTGTaGAGAGCCATCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSDVLYL*RAILAP
Trigger: CGGGGCCAGGATGGCTCTCCACAGATAGAGAACATC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: CVCALQVQACWGVSQSLNEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CTTTCACACCTCTCCTGGAGTGGGGCCAGGCTCTCCTCAAACGGTGCGCCATTCCATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: LSHLSWSGARLSSNGAPFHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...GAATGGCGCACCGTTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCAGTAGCATGGCCAGGGCCTCACTTGGCCCAGTCCCATTAGCAGGAGTTTCTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: CSSMARASLGPVPLAGVSRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...AGAAACTCCTGCTAATGGGACTGGGCCAAGTGAGGCCCTGGCCATGCTACTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGCAGGGGGTCAGGGCTaGACACAGCATGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSAGGQG*TQHAPE
Trigger: CTCAGGAGCATGCTGTGTCCAGCCCTGACCCCCTGC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTTCTTGAGAAGCAGGTTCTTGAACAGGGCAGAGCAGCAGTTCCCAGGAATGCTGCAGGGGGTCAGGGCTaGACACAGCATGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LLEKQVLEQGRAAVPRNAAGGQG*TQHAPE
Trigger: CTCAGGAGCATGCTGTGTCCAGCCCTGACCCCCTGC...AGCATTCCTGGGAACTGCTGCTCTGCCCTGTTCAAGAACCTGCTTCTCAAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTASCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTACCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp CTCTCCTTGAAGTATTTGTCTGAAAGTGGCCACCAGCTTCAGGGGGTCCCTCTGGGCCCTGGGTCAGAATaGGCGGAGAAGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: LSLKYLSESGHQLQGVPLGPGSE*AEKPSM
Trigger: CATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCC...CAGAGGGACCCCCTGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAGGAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGATCCGTCCTAGGCCCTaGGTCAGAATGGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQIRPRP*VRMGGE
Trigger: TTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGAT...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGATGTCACAGCCACTTaGACCCACTTGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSDVTAT*THLGTV
Trigger: GACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCTCCTGGCATGGCCCTaGCTAGAAATATCCAACCCC +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSLLAWP*LEISNP
Trigger: GGGGTTGGATATTTCTAGCCAGGGCCATGCCAGGAG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCCTGCTCTCAGCTCTaGTCGCGGCGGCTATCGACG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSPCSQL*SRRLST
Trigger: CGTCGATAGCCGCCGCGACCAGAGCTGAGAGCAGGG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS-3UTR CCA 90 bp AGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTTGGCCGAGAGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: RAVSLGSPSSWDHQLGLAERHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCTCTC...GGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651176.1
3UTR CAA 72 bp ACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATaGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: TNWGWPLGPCGT*RSQIAHSGRAA
Trigger: TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
3UTR CAA 72 bp TTGGGTTCTCCCTCCAGCTGGGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGGGACATTGAGATCCCA +
Preference number: 4 (lower is better)
Translates to: LGSPSSWDHQLG*ALRSMWDIEIP
Trigger: TGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AYVREASTLAAVFCAVSHAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCAGTGGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLQPPQACLKLEFFLLPVAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...CACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAATCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LKLEFFLLPVERHWQVAESPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTAGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAERLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: HPGSLELLPIPLGLRPNIVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACCATCCCCTTGCAGAGTaGCCAGCCTCCTGGCATGGC +
Preference number: 4 (lower is better)
Translates to: FFLLPVERHWQVAELFHNHPLAE*PASWHG
Trigger: GCCATGCCAGGAGGCTGGTCACTCTGCAAGGGGATG...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR GCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCACTGGGACTTGGAGGTTaGCTCGGCAACCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSLGLGG*LGNPSA
Trigger: AGCAGAGGGGTTGCCGAGGCAACCTCCAAGTCCCAG...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCAGTCACCCAGAAGATaGCGCAGGTGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSQSPRR*RRCWGK
Trigger: CTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp ACAGAACGGTGCTGGAAGGCCTCCATACTGAGGCTGTTGTCATTGAAGATCTTCTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TERCWKASILRLLSLKIFSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...GAAGATCTTCAATGACAACAGCCTCAGTATGGAGGCCTTCCAGCACCGTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCATTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAAFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: HPGSLELLPIPLGLRPNILGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQLGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCATGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCGTGCGTGTGCGCGCTaGAGGTGCAGGCATGTTGGG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFRACAR*RCRHVG
Trigger: CCCAACATGCCTGCACCTGCAGCGCGCACACGCACG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLSRPLL*SHPGSL
Trigger: AAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGAGGATCTATGACCCCTaGCTTGAGAGGGAGAATGGG +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGRIYDP*LERENG
Trigger: CCCATTCTCCCTCTCAAGGCAGGGGTCATAGATCCT...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR GCA 90 bp GTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCAGTGGGAGGTTGCCCCTCCTaGTCAGGTTCCTCCAATAGG +
Preference number: 4 (lower is better)
Translates to: VLQPPQACLKLEFFLLPVGGCPS*SGSSNR
Trigger: CCTATTGGAGGAACCTGAGCAGGAGGGGCAACCTCC...CACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR GCA 90 bp GTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCAGTGTCCTCTGCATCCCCTTaGAGAGTGACCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLQPPQACLKLEFFLLPVSSASP*RVTSLL
Trigger: CAGGAGGCTGGTCACTCTGCAAGGGGATGCAGAGGA...CACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCAGGAACTCCCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSRNSQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGGGAGTTCCT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTGTGCAGAGACACTTaGCCAGCCTCAGCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLLCRDT*PASAPF
Trigger: GAAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: GLAYVREASTLAAVFCAVTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...CACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGACAGGGCCTGGAGCTaGATGGGGAGTTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFDRAWS*MGSLPG
Trigger: CCCCGGCAAACTCCCCATCCAGCTCCAGGCCCTGTC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACTTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CGGSRRAVSLGSPSSWDHLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...GTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCACGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: CGGSRRAVSLGSPSSWDHDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...GTGATCCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: CALQVQACWGVSQSLNFPGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AASHSPRAETQYPLSLASTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCATCTGGCCCAGGCTaGGGGGCATCTGCAGGTGAG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSSGPG*GASAGE
Trigger: CTCACCTGCAGATGCCCCCCAGCCTGGGCCAGATGA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGCAGGGGGTCAGGGCTaGACACAGCATGCTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSAGGQG*TQHAPE
Trigger: CTCAGGAGCATGCTGTGTCCAGCCCTGACCCCCTGC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGCCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCACCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCSEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGAAGCTGGCGGTGGATaGGGCAACAGAAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRREAGGG*GNRKDA
Trigger: TGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAAAGGGAAGCTGGCGGTaGATGGGGCAACAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRKGSWR*MGQQKR
Trigger: TCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCATCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCCCACCGAGGCCTaGAGGTGCTGGACAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSPTEA*RCWTVS
Trigger: AGACACTGTCCAGCACCTTCAGGCCTCGGTGGGAGA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTATGCTCTCAAGGGTGCTaGTGTGTTGCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLCSQGC*CVARWC
Trigger: GCACCATCTTGCAACACATCAGCACCCTTGAGAGCA...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTCAGGGGGTCCCTCTaGTATATGCTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSFRGSL*YMLSRV
Trigger: CACCCTTGAGAGCATATATCAGAGGGACCCCCTGAA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTACCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGCCTGGAACTTGGTCTaGGTCTTCAGTACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLAWNLV*VFSTWG
Trigger: CCCCCAGGTACTGAAGACTCAGACCAAGTTCCAGGC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTTGCCGGGGCCAAGTGTaGAGCTGGCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSCRGQV*SWQRRA
Trigger: TGCTCTTCTCTGCCAGCTTCACACTTGGCCCCGGCA...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGGTTGCCATGGACGATaGCCACCAGGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSGCHGR*PPGAET
Trigger: TGTCTCTGCCCCTGGTGGTCATCGTCCATGGCAACC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCACCACTGCCAAAAGGTaGAGCCACGGCCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVTTAKR*SHGPAG
Trigger: TCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGT...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGCAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp TGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCACACCATGGTCACATCTaGGCAGAGCAGGGGGTCAGG +
Preference number: 4 (lower is better)
Translates to: WTHLGTVRLQIQSIWGLAHHGHI*AEQGVR
Trigger: CCTGACCCCCTGCTCTGCTCAGATGTGACCATGGTG...TGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTTCTTGAGAAGCAGGTTCTTGAACAGGGCAGAGCAGCAGTTCCCAGGAATGCTCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LLEKQVLEQGRAAVPRNAPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...AGCATTCCTGGGAACTGCTGCTCTGCCCTGTTCAAGAACCTGCTTCTCAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCACTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LKLEFFLLPVERHWQVAEPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp GAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAAAGGTCCTCTGGAGTaGGTGGGCACCGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: EFFLLPVERHWQVAELFHKGPLE*VGTAFL
Trigger: GAGGAAAGCGGTGCCCACTCACTCCAGAGGACCTTT...ATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTTCAGGGGGTCCCTCTaGTATATGCTCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLFRGSL*YMLRAG
Trigger: GCCAGCCCTGAGCATATATCAGAGGGACCCCCTGAA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCAGTCACCCAGAAGATaGCGCAGGTGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLQSPRR*RRCWGK
Trigger: CTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCTACTCGGTGCTaGAGCCTCCGCAAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFSPTRC*SLRKPV
Trigger: GACAGGCTTGCGGAGGCTGCAGCACCGAGTAGGGGA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GLAYVREASTLAAVFCAVFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...CACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSCFQWKGIGKWRNCSITALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGACTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSELGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCTGTGCGCGCTGCAGGTaGAGGCATGTTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVCARCR*RHVGVC
Trigger: ACACACCCCAACATGCCTGCACCTGCAGCGCGCACA...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp ACAGAACGGTGCTGGAAGGCCTCCATACTGAGGCTGTTGTCATTGAAGATCTTCGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TERCWKASILRLLSLKIFVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...GAAGATCTTCAATGACAACAGCCTCAGTATGGAGGCCTTCCAGCACCGTTCTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTTCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSSRPLL*SHPGSL
Trigger: AAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGA...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGGAGGTTGCCCCTCCTaGTCAGGTTCCTCCAATAGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLGGCPS*SGSSNR
Trigger: CCTATTGGAGGAACCTGAGCAGGAGGGGCAACCTCC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTCCTCTGCATCCCCTTaGAGAGTGACCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLSSASP*RVTSLL
Trigger: CAGGAGGCTGGTCACTCTGCAAGGGGATGCAGAGGA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGGCACCGCTTTCCTCTaGATCCCCTTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLGTAFL*IPLQSD
Trigger: GTCACTCTGCAAGGGGATGCAGAGGAAAGCGGTGCC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCAACACCTCTCCTGGAGTaGGGCCAGGCTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSTPLLE*GQALLK
Trigger: TTTGAGGAGAGCCTGGCCCCACTCCAGGAGAGGTGT...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCACTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTGGCCCCGGATGACATaGGCAATGGTGATGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSWPRMT*AMVMPP
Trigger: TGGGGGCATCACCATTGCCCATGTCATCCGGGGCCA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACTGTGGAGAGCCATCCTaGCCCCGGATGACATGGGCA +
Preference number: 4 (lower is better)
Translates to: FFLLPVERHWQVAELFHNCGEPS*PRMTWA
Trigger: TGCCCATGTCATCCGGGGCCAGGATGGCTCTCCACA...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGATGTTCTCTATCTGTaGAGAGCCATCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGDVLYL*RAILAP
Trigger: CGGGGCCAGGATGGCTCTCCACAGATAGAGAACATC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGACATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTAGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTTCTTGAGAAGCAGGTTCTTGAACAGGGCAGAGCAGCAGTTCCCAGGAATGCTGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLEKQVLEQGRAAVPRNAGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...AGCATTCCTGGGAACTGCTGCTCTGCCCTGTTCAAGAACCTGCTTCTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAEIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCTTCCAGTCAGTGCTaGAAGGAGGTGGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSPSSQC*KEVGRG
Trigger: TCCCCTGCCCACCTCCTTCCAGCACTGACTGGAAGG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGCCCTGGGTCAGAATaGGCGGAGAAGCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLGPGSE*AEKPSM
Trigger: CATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCC...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTATCCGTCCTAGGCCCTaGGTCAGAATGGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQIIRPRP*VRMGGE
Trigger: TTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGAT...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGCTCCCAGGCAGCATTaGAGGTGTGGAGCCATACGT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLAPRQH*RCGAIR
Trigger: ACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCTCCCAGGCAGCATTaGAGGTGTGGAGCCATACGT +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWAPRQH*RCGAIR
Trigger: ACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGC...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGCTCCCAGGCAGCATTaGAGGTGTGGAGCCATACGT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLAPRQH*RCGAIR
Trigger: ACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTAGAAGCTGGCGGTGGATaGGGCAACAGAAAAGATGCA +
Preference number: 4 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLEAGGG*GNRKDA
Trigger: TGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTC...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTAAGGGAAGCTGGCGGTaGATGGGGCAACAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSKGSWR*MGQQKR
Trigger: TCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTTCAGTGTAAGCAGTaGCTGCCCCAGCCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLQCKQ*LPQPAV
Trigger: AACAGCGGGCTGGGGCAGCCACTGCTTACACTGAAG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454075.7
ENST00000553533.2
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTGTCCTCTGGAGTGAGTaGGCACCGCTTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSVLWSE*APLSSA
Trigger: TGCAGAGGAAAGCGGTGCCCACTCACTCCAGAGGAC...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR CCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGACCCAGGTCCCTCCCTaGAGCTCTGACGACACAGAG +
Preference number: 4 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLTQVPP*SSDDTE
Trigger: CTCTGTGTCGTCAGAGCTCCAGGGAGGGACCTGGGT...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553533.2
3UTR CAA 72 bp ACTCGGTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: TRCCSLRKPVLN*SSSCFQWKGIG
Trigger: GCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 72 bp CGTTTCCAAATCTGGATCCTCTTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCAGTGGTCTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RFQIWILFSTRA*AASSSPVVSCS
Trigger: ACTGCAGGAGACCACTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAAGAGGATCCAGATTTGGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 72 bp CGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATGTTCTCTATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RIRSPSERMDRS*AENGWMFSICG
Trigger: TCCACAGATAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSDPTET*SGTWRL
Trigger: CAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCATTCAGGGGGTCCCTCTaGTATATGCTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAAFRGSL*YMLSRV
Trigger: CACCCTTGAGAGCATATATCAGAGGGACCCCCTGAA...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCAGGAAGCAACTGGTaGCGAGGGTTCTCAGGACTT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLPGSNW*RGFSGL
Trigger: AAGTCCTGAGAACCCTCGTCACCAGTTGCTTCCTGG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTATCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCAGTGTCTCACCCTCCCAAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AVSHPPKFVLSRRQKQIDDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...GTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGATGCCCCCAATCTCTaGGTCGCTGAAGCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFDAPNL*VAEAEE
Trigger: CTCCTCCGCTTCAGCGACTCAGAGATTGGGGGCATC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCTGCTTGGCAGGGCATaGGCAAGTGTCCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFLLGRA*ASVQSR
Trigger: CCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTCTCCTTGAAGTATTTGTCTGAAAGTGGCCACCAGCTTCAGGGGGTCCCTCTGTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSLKYLSESGHQLQGVPLLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...CAGAGGGACCCCCTGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCAAAGGTCCTCTGGAGTaGGTGGGCACCGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSKGPLE*VGTAFL
Trigger: GAGGAAAGCGGTGCCCACTCACTCCAGAGGACCTTT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGATTCCTCATCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSDSSSC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGATGAGGAATC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLPRQPL*CLLPFS
Trigger: TGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSPRQPL*CLLPFS
Trigger: TGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTGTGTTGCAAGATGGTaGTCCCCTCCCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSCVARW*SPPPAL
Trigger: GAGAGCAGGGGGAGGGGAGCACCATCTTGCAACACA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQIFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTTTCCCTGCCAGCTGCTaGTGCCGTTTCCAAATCTGG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSFPASC*CRFQIW
Trigger: CCAGATTTGGAAACGGCAGCAGCAGCTGGCAGGGAA...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAGTGTCTCACCCTCCCAAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACCTCAGCTCCCGCGCCTaGTTCTCTGTCACCATGTCG +
Preference number: 4 (lower is better)
Translates to: AVSHPPKFVLSRRQKQIDLSSRA*FSVTMS
Trigger: CGACATGGTGACAGAGAAGCAGGCGCGGGAGCTGAG...GTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTTCTCCAGTGCTTTCTaGTCCAGCCCCAGGACCCTG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSFSSAF*SSPRTL
Trigger: CAGGGTCCTGGGGCTGGAGCAGAAAGCACTGGAGAA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CTATGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACCTGCAGGAGGGGCTGTaGCCCCAAGGACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LCGHATKVPAIHLTYPRYLQEGL*PQGPSP
Trigger: GGGGGAGGGTCCTTGGGGGCACAGCCCCTCCTGCAG...GTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACGTATGTGTGTGTGCGTaGGTGTGCGCGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHVCVCA*VCALQV
Trigger: CACCTGCAGCGCGCACACGCACGCACACACACATAC...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTTGCTGCTGTCTTCTGTaGAGTGTCTCACCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: GVSICQRGQHTCCCLLCSCCCLL*SVSPSQ
Trigger: TTGGGAGGGTGAGACACTGCACAGAAGACAGCAGCA...ACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGGGACTTGGAGGTTaGCCCTCCTGCTCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LKLEFFLLPVERHWQVAELGLGG*PSCSGS
Trigger: GGAACCTGAGCAGGAGGGGCAACCTCCAAGTCCCAG...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR GCA 90 bp AAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGGGCACCGCTTTCCTCTaGATCCCCTTGCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: KLEFFLLPVERHWQVAELGTAFL*IPLQSD
Trigger: GTCACTCTGCAAGGGGATGCAGAGGAAAGCGGTGCC...CAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTTTCTGGGGGCATCTTaGAGACCAGACCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSFLGAS*RPDPTE
Trigger: CTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAGAAA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTTTCTGGGGGCATCTTaGAGACCAGACCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLFLGAS*RPDPTE
Trigger: CTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAGAAA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTTTCTGGGGGCATCTTaGAGACCAGACCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLFLGAS*RPDPTE
Trigger: CTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAGAAA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCCTCTAGCTCTCCAGTaGTCTCCTGCAGTAGCATGG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLPLALQ*SPAVAW
Trigger: CCATGCTACTGCAGGAGACCACTGGAGAGCTAGAGG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: AASHSPRAETQYPLSLASCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGACAGCGGAGGCTTGGCTaGGGCCCCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRQRRLG*GPQEPQ
Trigger: TTGAGGTTCCTGGGGGCCCCAGCCAAGCCTCCGCTG...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGAAGAGGAAGTGCTCTaGGAGCAGCCCCCGGTTGGT +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFEEEVL*EQPPVG
Trigger: ACCAACCGGGGGCTGCTCCCAGAGCACTTCCTCTTC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGATGTTCTCTATCTGTaGAGAGCCATCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWDVLYL*RAILAP
Trigger: CGGGGCCAGGATGGCTCTCCACAGATAGAGAACATC...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: AASHSPRAETQYPLSLASGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCTGGGGTAGGAAGTaGTTGGTCCCTTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLWGRK*LVPFHG
Trigger: ACCGTGGAAAGGGACCAACCACTTCCTACCCCAGAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGGAGTGAGAGTGTGGTaGGTACACCTGGGGCACCAT +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSGVRVW*VHLGHH
Trigger: ATGGTGCCCCAGGTGTACCCACCACACTCTCACTCC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGATGGAGTGAGAGTGTaGTGGGTACACCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSDGVRV*WVHLGH
Trigger: GTGCCCCAGGTGTACCCACCACACTCTCACTCCATC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
CDS-3UTR CCA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCATCACCAACTGGGGTTaGCCCTTAGGTCCATGTGGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLITNWG*PLGPCG
Trigger: CCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: QQRREYVFTNPSALRKRCSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...ACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCATCCGTCCTAGGCCCTaGGTCAGAATGGGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSIRPRP*VRMGGE
Trigger: TTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGAT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGSEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGATGTCACAGCCACTTaGACCCACTTGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLDVTAT*THLGTV
Trigger: GACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCACCAGCCTCCTGGCATaGCCCTGGCTAGAAATATCC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLTSLLA*PWLEIS
Trigger: GGATATTTCTAGCCAGGGCCATGCCAGGAGGCTGGT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGAGAGAAAGGTCCTCTaGAGTGAGTGGGCACCGCTT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLERKVL*SEWAPL
Trigger: AAGCGGTGCCCACTCACTCCAGAGGACCTTTCTCTC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS-3UTR CCA 90 bp GAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATGAGAGAAAGGTCCTCTaGAGTGAGTGGGCACCGCTT +
Preference number: 4 (lower is better)
Translates to: EFFLLPVERHWQVAELFHERKVL*SEWAPL
Trigger: AAGCGGTGCCCACTCACTCCAGAGGACCTTTCTCTC...ATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR CCA 90 bp CTTCTTGAGAAGCAGGTTCTTGAACAGGGCAGAGCAGCAGTTCCCAGGAATGCTATATATGCTCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: LLEKQVLEQGRAAVPRNAIYAQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGAGCATATAT...AGCATTCCTGGGAACTGCTGCTCTGCCCTGTTCAAGAACCTGCTTCTCAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 72 bp TGGAGGTGTGGAGCCATACGTAGATGTCACAGCCACTaGGACCCACTTGGGCACAGTCAGACTCCAAATTCA +
Preference number: 4 (lower is better)
Translates to: WRCGAIRRCHSH*DPLGHSQTPNS
Trigger: TGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 72 bp TCTGTGACAGACTCAGTGCCCTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGGTTCTTGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SVTDSVPFRSHR*IFLRSRFLNRA
Trigger: TGCCCTGTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAAGGGCACTGAGTCTGTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 72 bp ACAGAACGGTGCTGGAAGGCCTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGGGCCAGGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TERCWKASILRL*SLKIFWARKRK
Trigger: CTTCCTCTTCCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAGTATGGAGGCCTTCCAGCACCGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTGCTCTCAAGGGTGCTaGTGTGTTGCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLCSQGC*CVARWC
Trigger: GCACCATCTTGCAACACATCAGCACCCTTGAGAGCA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTGCTCTCAAGGGTGCTaGTGTGTTGCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLCSQGC*CVARWC
Trigger: GCACCATCTTGCAACACATCAGCACCCTTGAGAGCA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTTCAGGGGGTCCCTCTaGTATATGCTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLFRGSL*YMLSRV
Trigger: CACCCTTGAGAGCATATATCAGAGGGACCCCCTGAA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACTCACCATGTCGGCCCTaGCCAGCGGAGGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYSPCRP*PAEAWL
Trigger: CAGCCAAGCCTCCGCTGGTCAGGGCCGACATGGTGA...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACTCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: AYVREASTLAAVFCAVSHSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTATCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp TGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCAGCAGGATCTCCTTGTTaGACTGCGACCAGGACACAG +
Preference number: 4 (lower is better)
Translates to: WTHLGTVRLQIQSIWGLAAGSPC*TATRTQ
Trigger: CTGTGTCCTGGTCGCAGTTCAACAAGGAGATCCTGC...TGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCCAATCCAAGTGCCCTaGGGAAACGCTGTCACTGGC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFPIQVP*GNAVTG
Trigger: GCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: AYVREASTLAAVFCAVSHVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGGCTGGATGTTCTCTAGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: PPVSEWTGLWQRMAGCSLVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...TAGAGAACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGTGTGTCTCAGAGCCTaGACTTCCCTTCCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLVCLRA*TSLPVS
Trigger: ACTGACTGGAAGGGAAGTTCAGGCTCTGAGACACAC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAATTCAGGGGGTCCCTCTaGTATATGCTCAGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKLEFFLLPVERHWQVAEFRGSL*YMLRAG
Trigger: GCCAGCCCTGAGCATATATCAGAGGGACCCCCTGAA...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR GCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGCCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLPRQPL*CLLPFS
Trigger: TGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGG...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCAGGACACAGAACGGTaGTGGAAGGCCTCCATACTG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSQDTER*WKASIL
Trigger: CAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGCTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCACTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAALHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QLGLALRSMWDIEIPDCPWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...TGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSEVSVCS*LSVLGP
Trigger: AGGGCCTAGGACGGATAGGCAGGAACATACAGACAC...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGTGTCTGTATGTTCCTaGCTATCCGTCCTAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLVSVCS*LSVLGP
Trigger: AGGGCCTAGGACGGATAGGCAGGAACATACAGACAC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLSRQPL*CLLPFS
Trigger: TGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538913.6
CDS-3UTR CCA 90 bp TGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATTTCTGGGGGCATCTTaGAGACCAGACCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: WTHLGTVRLQIQSIWGLAFLGAS*RPDPTE
Trigger: CTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAGAAA...TGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTCTCCTTGAAGTATTTGTCTGAAAGTGGCCACCAGCTTCAGGGGGTCCCTCTGTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSLKYLSESGHQLQGVPLSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...CAGAGGGACCCCCTGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACGGGCCTGGAGCTGGATaGGGAGTTTGCCGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVLLHSLIHGPGAG*GVCRGQ
Trigger: TTGGCCCCGGCAAACTCCCCATCCAGCTCCAGGCCC...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTTTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EYLGVSICQRGQHTCCCLLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...AAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCCCCCAGTGAGCGAATaGACAGGTCTTTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSPPVSE*TGLWQR
Trigger: TCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGG...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGCTGGGGCACCATATCTaGGCCAAGCTGCATGCTCAT +
Preference number: 4 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLLGHHI*AKLHAH
Trigger: ATGAGCATGCAGCTTGGCCCAGATATGGTGCCCCAG...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000553533.2
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAAGAGCTGTCTCTTTaGGTTCTCCCTCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSEELSL*VLPPAG
Trigger: CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTC...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGGGAGGCAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: SGRQQRREYVFTNPSALRIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...CCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTGCCTCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCCACTTGGACCCACTTaGGCACAGTCAGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLPLGPT*AQSDSK
Trigger: TTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCACTTGGACCCACTTaGGCACAGTCAGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLPLGPT*AQSDSK
Trigger: TTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACACTCCTGGCATGGCCCTaGCTAGAAATATCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SSCFQWKGIGKWRNCSITLLAWP*LEISNP
Trigger: GGGGTTGGATATTTCTAGCCAGGGCCATGCCAGGAG...TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR CCA 90 bp TCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAACCAGCCTCCTGGCATaGCCCTGGCTAGAAATATCC +
Preference number: 4 (lower is better)
Translates to: SSCFQWKGIGKWRNCSITTSLLA*PWLEIS
Trigger: GGATATTTCTAGCCAGGGCCATGCCAGGAGGCTGGT...TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR CCA 90 bp TGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTTTTGTCCTCTGGAGTGAGTaGGCACCGCTTTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CFQWKGIGKWRNCSITAFVLWSE*APLSSA
Trigger: TGCAGAGGAAAGCGGTGCCCACTCACTCCAGAGGAC...AAAAGCTGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS-3UTR CCA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACATATATGCTCAGGGCTaGCTCTCCAGCCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: FFLLPVERHWQVAELFHNIYAQG*LSSQSP
Trigger: GGGTGACTGGCTGGAGAGCCAGCCCTGAGCATATAT...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR TCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTTTCAGGGGGTCCCTCTaGTATATGCTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSFRGSL*YMLSRV
Trigger: CACCCTTGAGAGCATATATCAGAGGGACCCCCTGAA...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCTTCAGGGGGTCCCTCTaGTATATGCTCTCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVFRGSL*YMLSRV
Trigger: CACCCTTGAGAGCATATATCAGAGGGACCCCCTGAA...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCCCCACCTCAGCCATaGACTTCAGGTTCAGAGTTT +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSPPQP*TSGSEF
Trigger: AAACTCTGAACCTGAAGTTCATGGCTGAGGTGGGGA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGGAGACAGCGTTTGGTaGGGTCCAGGACACCATCAA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFGDSVW*GPGHHQ
Trigger: TTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCACAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp CAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: QQRREYVFTNPSALRKRCRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...ACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGTCCATGTGGGACATTaGGATCCCAGATTGCCCATA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSVHVGH*DPRLPI
Trigger: TATGGGCAATCTGGGATCTCAATGTCCCACATGGAC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTTTAGTCTTTTCCTCCTaGCCCAGGAGTAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSLVFSS*PRSRWG
Trigger: TCCCCACCTACTCCTGGGTCAGGAGGAAAAGACTAA...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFPRQPL*CLLPFS
Trigger: TGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACAGTCACCCAGAAGATaGCGCAGGTGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LKLEFFLLPVERHWQVAEQSPRR*RRCWGK
Trigger: CTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTG...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AATTTATTTTATGGCTTAGGATCTATGACCCCTGCCTTGAGAGGGAGAATGGGAGCCTCAGCCCCCTTCTaGAGGGCTTCTCGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NLFYGLGSMTPALRGRMGASAPF*RASRRR
Trigger: CCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGC...TCCCATTCTCCCTCTCAAGGCAGGGGTCATAGATCCTAAGCCATAAAATAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCCTGCCAGCTGCTGCTaGCGTTTCCAAATCTGGATC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFPASCC*RFQIWI
Trigger: GATCCAGATTTGGAAACGGCAGCAGCAGCTGGCAGG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: SSCFQWKGIGKWRNCSITSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LAYVREASTLAAVFCAVSSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCACTGGGACATAACCCCTaGCATCCTTACCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSLGHNP*HPYPSV
Trigger: AACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAG...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp AAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGCGGAGAAGCCTTCCATaGCCTAACCTGTGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: KLEFFLLPVERHWQVAELRRSLP*PNLCSY
Trigger: GTAAGAGCACAGGTTAGGGCATGGAAGGCTTCTCCG...CAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCGGAGAAGCCTTCCATaGCCTAACCTGTGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVRRSLP*PNLCSY
Trigger: GTAAGAGCACAGGTTAGGGCATGGAAGGCTTCTCCG...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGCTGCTGTCTTCTGTaGAGTGTCTCACCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SIWGLAYVREASTLAAVFCCCLL*SVSPSQ
Trigger: TTGGGAGGGTGAGACACTGCACAGAAGACAGCAGCA...GAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GCAGTGTCTCACCCTCCCAAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACTTTCTGGGGGCATCTTaGAGACCAGACCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: AVSHPPKFVLSRRQKQIDFLGAS*RPDPTE
Trigger: CTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAGAAA...GTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACCGCTGCACTTTTTCTaGGGGCATCTTGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: LKLEFFLLPVERHWQVAEPLHFF*GHLGDQ
Trigger: CTGGTCTCCAAGATGCCCCCAGAAAAAGTGCAGCGG...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR CCA 90 bp AAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: KLEFFLLPVERHWQVAELPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...CAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCTTCCTGCTTCCAGTaGAAAGGCATTGGCAAGTGG +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSSCFQ*KGIGKW
Trigger: CCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFLSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGCCCTTAGGTCCATGTaGGACATTGAGATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSALRSM*DIEIPD
Trigger: ATCTGGGATCTCAATGTCCCACATGGACCTAAGGGC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GAGACCCAATATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ETQYPLSLASSVNVSVCSAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATATTGGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCCATCTGCTGCTTaGCAGGGCATGAGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFSPSAA*QGMSKC
Trigger: ACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCTCAGAAGCCTCCACCTaGCTAACAGGAATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVSEAST*LTGIWG
Trigger: GCCCCAAATTCCTGTTAGCCAGGTGGAGGCTTCTGA...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAAAGGGAAGCTGGCGGTaGATGGGGCAACAGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSKGSWR*MGQQKR
Trigger: TCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 72 bp TTCCCAGGAATGCTGTTCTCCAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTTTCTGCTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: FPGMLFSKGTVL*MISPVLSAPAP
Trigger: TGGGGCTGGAGCAGAAAGCACTGGAGAAATCATCAACAACACTGTGCCCTTGGAGAACAGCATTCCTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
3UTR CAA 72 bp TCGCTGAAGCGGAGGAGAAAGGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACGTACTGTTTGCTGATG +
Preference number: 4 (lower is better)
Translates to: SLKRRRKVPSGS*RRRLVTYCLLM
Trigger: CATCAGCAAACAGTACGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAACCTTTCTCCTCCGCTTCAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR TCA 90 bp CTCTCCTTGAAGTATTTGTCTGAAAGTGGCCACCAGCTTCAGGGGGTCCCTCTGCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSLKYLSESGHQLQGVPLLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...CAGAGGGACCCCCTGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCATGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp CTATGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACCCACCCAGGGTCCCTTaGGCTGCTTCCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LCGHATKVPAIHLTYPRYPPRVP*AASHSP
Trigger: AGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGG...GTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACCTGGGACTTGGAGGTTaGCTCGGCAACCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVLLHSLIHLGLGG*LGNPSA
Trigger: AGCAGAGGGGTTGCCGAGGCAACCTCCAAGTCCCAG...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp GAGACCCAATATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCAGGGTGCTGATGTGTTaGAAGATGGTGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ETQYPLSLASSVNVSVCSRVLMC*KMVLPS
Trigger: GGAGGGGAGCACCATCTTGCAACACATCAGCACCCT...GGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATATTGGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGTTTCTATCAAGCTGTaGAGAGACACTTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSVSIKL*RDTWPA
Trigger: GGCTGGCCAAGTGTCTCTGCACAGCTTGATAGAAAC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACGCTCTCCTCAAACGGTaGGCCATTCCCTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVLLHSLIHALLKR*AIPCQL
Trigger: CAGCTGGCAGGGAATGGCGCACCGTTTGAGGAGAGC...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTAGCAGTTCCCAGGAATaGTGTTCTCCAAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFSSSQE*CSPRAQ
Trigger: CTGTGCCCTTGGAGAACAGCATTCCTGGGAACTGCT...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: EYLGVSICQRGQHTCCCLTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...AAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQIISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTGCTGCTGTCTTCTGTaGAGTGTCTCACCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFCCCLL*SVSPSQ
Trigger: TTGGGAGGGTGAGACACTGCACAGAAGACAGCAGCA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGCCCAGCAGGATCTCCTaGTTTGGGAACTTGAACAAA +
Preference number: 4 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWPSRIS*FGNLNK
Trigger: TTTGTTCAAGTTCCCAAAGCAGGAGATCCTGCTGGG...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR CCA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGAATGGACAGGTCTTTaGCAGAGAATGGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLEWTGL*QRMAGC
Trigger: ACATCCAGCCATTCTCTGCCAAAGACCTGTCCATTC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCCATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: SIWGLAYVREASTLAAVFHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...GAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTACCATGGTAGGCATCTaGAGCTCTGGGGTAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFTMVGI*SSGVGS
Trigger: ACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGT...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
3UTR CAA 72 bp CCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTaGGGGGTTAGCATATGTCAGAGAGGCCAGCACACT +
Preference number: 4 (lower is better)
Translates to: PLGHSQTPNSEY*GVSICQRGQHT
Trigger: AGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 72 bp GAGCCATACGTAGATGTCACAGCCACTTGGACCCACTaGGGCACAGTCAGACTCCAAATTCAGAGTATTTGG +
Preference number: 4 (lower is better)
Translates to: EPYVDVTATWTH*GTVRLQIQSIW
Trigger: CCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTGGGATAGAGATTTTTaGGCTGAGCAAGATCCCGGA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSWDRDF*AEQDPG
Trigger: TCCGGGATCTTGCTCAGCTCAAAAATCTCTATCCCA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTAGGCTGACAACACGTTaGCTGATTCTTCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFRLTTR*LILLGR
Trigger: TCTCCCCAGAAGAATCAGTCAACGTGTTGTCAGCCT...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR TCA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGCCTGCTTTGGGAACTTaGACAAACTACATAACCCTC +
Preference number: 4 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSEPALGT*TNYITL
Trigger: GAGGGTTATGTAGTTTGTTCAAGTTCCCAAAGCAGG...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR GCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCA +
Preference number: 4 (lower is better)
Translates to: FFLLPVERHWQVAELFHNISGPS*MLMEES
Trigger: TGATTCCTCCATGAGCATGCAGCTTGGCCCAGATAT...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACCTTCACCAATCCAAGTaGCCTGAGGAAACGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHLHQSK*PEETLS
Trigger: TGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAG...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACCCTCCCCATCTGCTaGTTGGCAGGGCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYTLPIC*LAGHEQ
Trigger: TTGCTCATGCCCTGCCAAGCAGCAGATGGGGAGGGT...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCAGGCACCCTCCCCATCTaGTGCTTGGCAGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: KFVLSRRQKQIDTCSMWSGTLPI*CLAGHE
Trigger: CTCATGCCCTGCCAAGCAGCAGATGGGGAGGGTGCC...TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FFLLPVERHWQVAELFHNWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR GCA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCAGCCCTTGTACTTTTaGATAGTCTCATACACGTAT +
Preference number: 4 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSQPLYF*IVSYTY
Trigger: ATACGTGTATGAGACTATGCAAAAGTACAAGGGCTG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACGCTTCTCGGAGAAGGTaGATCTCCCCTACTCGGTGC +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYASRRR*ISPTRC
Trigger: GCACCGAGTAGGGGAGATCCACCTTCTCCGAGAAGC...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGATCAGCACTAGGGCTTTaGCTGCCTCTAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRSALGL*LPLALQ
Trigger: CTGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGA...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTGCCGTTTCCAAATCTaGATCCTCTTCAGCACTAGG +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSCRFQI*ILFSTR
Trigger: CCTAGTGCTGAAGAGGATCCAGATTTGGAAACGGCA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp CTATGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACCTTTCACACCTCTCCTaGAGTGGGGCCAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCGHATKVPAIHLTYPRYLSHLS*SGARLS
Trigger: GGAGAGCCTGGCCCCACTCCAGGAGAGGTGTGAAAG...GTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGG +
Preference number: 4 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRDTERC*KASILR
Trigger: CCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTC...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGATGTTCTCTATCTGTaGAGAGCCATCCTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRDVLYL*RAILAP
Trigger: CGGGGCCAGGATGGCTCTCCACAGATAGAGAACATC...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGGAAAGCCTCATCCTTaGGCTTCTTGGGATAGAGAT +
Preference number: 4 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSGKPHP*ASWDRD
Trigger: ATCTCTATCCCAAGAAGCCCAAGGATGAGGCTTTCC...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACCATCTTGATGGTAGCTaGGACATAACCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHHLDGS*DITPAI
Trigger: GATGGCAGGGGTTATGTCCCAGCTACCATCAAGATG...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp GTTCCGTCGGGCTCATTGAGAAGAAGGCTAGTAACGTACTGTTTGCTGATGAAGAGCTGTCTTCCACCATaGTCACATCTGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VPSGSLRRRLVTYCLLMKSCLPP*SHLSRA
Trigger: TGCTCTGCTCAGATGTGACCATGGTGGAAGACAGCT...CTTCATCAGCAAACAGTACGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACGGTTCTCCCTCCAGCTaGGATCACCAACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVLLHSLIHGSPSS*DHQLGL
Trigger: CAACCCCAGTTGGTGATCCCAGCTGGAGGGAGAACC...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CCA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACCCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYPRQPL*CLLPFS
Trigger: TGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGG...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACCAGTCACCCAGAAGATaGCGCAGGTGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYQSPRR*RRCWGK
Trigger: CTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTG...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATATCCAGACCCCTCCTATaGTCCCACCCAGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: CGHATKVPAIHLTYPRYISRPLL*SHPGSL
Trigger: AAGGGACCCTGGGTGGGAGCATAGGAGGGGTCTGGA...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACCAGCCCTTGTACTTTTaGATAGTCTCATACACGTAT +
Preference number: 4 (lower is better)
Translates to: AYVREASTLAAVFCAVSHQPLYF*IVSYTY
Trigger: ATACGTGTATGAGACTATGCAAAAGTACAAGGGCTG...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp CTATGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACGCTGGGATCACCAACTaGGGTTGGCCCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LCGHATKVPAIHLTYPRYAGITN*GWPLGP
Trigger: TGGACCTAAGGGCCAACCCCAGTTGGTGATCCCAGC...GTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CCA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGCAGGATCTCCTGCTTTaGGAACTTGAACAAACTACA +
Preference number: 4 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSEQDLLL*ELEQTT
Trigger: TGTAGTTTGTTCAAGTTCCCAAAGCAGGAGATCCTG...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR TCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACTGCTCTCAAGGGTGCTaGTGTGTTGCAAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYCSQGC*CVARWC
Trigger: GCACCATCTTGCAACACATCAGCACCCTTGAGAGCA...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR GCA 90 bp CTATGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACCAGTCACCCAGAAGATaGCGCAGGTGTTGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LCGHATKVPAIHLTYPRYQSPRR*RRCWGK
Trigger: CTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTG...GTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATACTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGG +
Preference number: 4 (lower is better)
Translates to: CGHATKVPAIHLTYPRYILGQAA*SWRNQG
Trigger: CCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAG...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTTTTAAAGGCATTGGCAAGTaGCGGAACTGTTCCATAACA +
Preference number: 4 (lower is better)
Translates to: CFQWKGIGKWRNCSITAFKGIGK*RNCSIT
Trigger: TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTT...AAAAGCTGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR CCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACCCAGTGGAAAGGCATTaGCAAGTGGCGGAACTGTTC +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVLLHSLIHPVERH*QVAELF
Trigger: GAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGG...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCAGATTCGGTCCCCCAGTaGGCGAATGGACAGGTCTTT +
Preference number: 4 (lower is better)
Translates to: KFVLSRRQKQIDTCSMWSDSVPQ*ANGQVF
Trigger: AAAGACCTGTCCATTCGCTCACTGGGGGACCGAATC...TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACACCATCAAACCACTaGCAAAAGGTGAAGCCACGG +
Preference number: 4 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYTPSNH*QKVKPR
Trigger: CCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGT...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR GCA 90 bp ACAGAACGGTGCTGGAAGGCCTCCATACTGAGGCTGTTGTCATTGAAGATCTTCCAGCCCTTGTACTTTTaGATAGTCTCATACACGTAT +
Preference number: 4 (lower is better)
Translates to: TERCWKASILRLLSLKIFQPLYF*IVSYTY
Trigger: ATACGTGTATGAGACTATGCAAAAGTACAAGGGCTG...GAAGATCTTCAATGACAACAGCCTCAGTATGGAGGCCTTCCAGCACCGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CCA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATATTGTCTTGGTTGCCATaGACGATGACCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CGHATKVPAIHLTYPRYILSWLP*TMTTRG
Trigger: GCCCCTGGTGGTCATCGTCCATGGCAACCAAGACAA...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATAGGGGTAGGAAGTGGTTaGTCCCTTTCCACGGTCATC +
Preference number: 4 (lower is better)
Translates to: CGHATKVPAIHLTYPRYIGVGSG*SLSTVI
Trigger: GATGACCGTGGAAAGGGACCAACCACTTCCTACCCC...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATAAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTC +
Preference number: 4 (lower is better)
Translates to: CGHATKVPAIHLTYPRYIRHLEL*GRKWLV
Trigger: GACCAACCACTTCCTACCCCAGAGCTCCAGATGCCT...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CCA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAATAGAAAGGAAGGAGTaGATTGGCTCCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRIERKE*IGSTHC
Trigger: ACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTAT...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
3UTR CAA 72 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTaGCATAGTCTCATACACGTATCAGAAGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVL*HSLIHVSEAST
Trigger: GGTGGAGGCTTCTGATACGTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR CAA 72 bp GTCTTCTGTGCAGTGTCTCACCCTCCCAAATTTGTGTaGTCACGTAGGCAAAAGCAGATAGACACATGTTCT +
Preference number: 4 (lower is better)
Translates to: VFCAVSHPPKFV*SRRQKQIDTCS
Trigger: AGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGCACAGAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR TCA 90 bp AAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCACAATCTCTGAGTCGCTaGAGCGGAGGAGAAAGGTTC +
Preference number: 4 (lower is better)
Translates to: KFVLSRRQKQIDTCSMWSQSLSR*SGGERF
Trigger: GAACCTTTCTCCTCCGCTTCAGCGACTCAGAGATTG...TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR GCA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACTGGCTCCACCCACTGTaGATTCTCCTGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: HSYTRRISALVLLHSLIHWLHPL*ILLLVF
Trigger: AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCA...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
3UTR CAA 72 bp CACGTTCACACAGCTATACACGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCATACACGTATCAGAAG +
Preference number: 4 (lower is better)
Translates to: HVHTAIHEESQP*YFCIVSYTYQK
Trigger: CTTCTGATACGTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTGAACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR TCA 90 bp AAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCACTTGAAGTATTTGTCTaGAAGTGGCCACCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KFVLSRRQKQIDTCSMWSLEVFV*KWPPAS
Trigger: TGAAGCTGGTGGCCACTTTCAGACAAATACTTCAAG...TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS CCA 90 bp AGGGCCCTTGTGTGTGGCATTGGAGGAGGACTCGGGGTCCCAGATTaGGGCAGGGCTGGGCCACGGTTCACCTGGAGCTGGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: RALVCGIGGGLGVPD*GRAGPRFTWSWMGS
Trigger: ACTCCCCATCCAGCTCCAGGTGAACCGTGGCCCAGCCCTGCCCCAATCTGGGACCCCGAGTCCTCCTCCAATGCCACACACAAGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS GCA 90 bp TCTGGGACTTGGAGGTTGCCCCGCCGTTGCTCCTGCTGCTGCCCCTaGTCTCAGCTCTGGTCGCGGCGGCTATCGACGGTGAGTGAGATT +
Preference number: 5 (lower is better)
Translates to: SGTWRLPRRCSCCCP*SQLWSRRLSTVSEI
Trigger: AATCTCACTCACCGTCGATAGCCGCCGCGACCAGAGCTGAGAGCAGGGGCAGCAGCAGGAGCAACGGCGGGGCAACCTCCAAGTCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS CCA 90 bp CTAGGGTCTGGGTGGGAGGTTCATTCTCAGTGCCTACACCCCCTGTaGAAACCCAGCTGCCTCTCCCCCGACGGCTCTTGCACCCAGGAC +
Preference number: 5 (lower is better)
Translates to: LGSGWEVHSQCLHPL*KPSCLSPDGSCTQD
Trigger: GTCCTGGGTGCAAGAGCCGTCGGGGGAGAGGCAGCTGGGTTTCCACAGGGGGTGTAGGCACTGAGAATGAACCTCCCACCCAGACCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGACTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: AASHSPRAETQYPLSLASGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: ATEKMQQAGPSHTLEGHMGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...CATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS GCA 90 bp TGGGAGGTTCATTCTCAGTGCCTACACCCCCTGTGGAAACCCAGCTaGCTCTCCCCCGACGGCTCTTGCACCCAGGACAACTGCCACCAC +
Preference number: 5 (lower is better)
Translates to: WEVHSQCLHPLWKPS*LSPDGSCTQDNCHH
Trigger: GTGGTGGCAGTTGTCCTGGGTGCAAGAGCCGTCGGGGGAGAGGCAGCTGGGTTTCCACAGGGGGTGTAGGCACTGAGAATGAACCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNSWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000543873.6
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GLAYVREASTLAAVFCAVLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...CACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWSWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR CAA 90 bp GATCCCGGATTCGGTCCCCCAGTGAGCGAATGGACAGGTCTTTGGCAGAGAATGCCCACCCAGGGTCCCTaGAGCTGCTTCCCATTCCCC +
Preference number: 5 (lower is better)
Translates to: DPGFGPPVSEWTGLWQRMPTQGP*SCFPFP
Trigger: GGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGG...CATTCTCTGCCAAAGACCTGTCCATTCGCTCACTGGGGGACCGAATCCGGGATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGCCACTTGGACCCACTaGGGCACAGTCAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNATWTH*GTVRLQ
Trigger: TTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS TCA 90 bp GGTAGTGGGTGTGGCTGCAAGGCACCTGGGCTGAAGGGGGTTCTGTaGTCTGTTGGCCTAGGGTCTGGGTGGGAGGTTCATTCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: GSGCGCKAPGLKGVL*SVGLGSGWEVHSQC
Trigger: GCACTGAGAATGAACCTCCCACCCAGACCCTAGGCCAACAGATCACAGAACCCCCTTCAGCCCAGGTGCCTTGCAGCCACACCCACTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 90 bp TGCTGCTATCCACTACCATTCCCTGCCCTGTGCACTCCATGCTCTTaGTCACCCCCACTCACCCGGGCCCCAGTGTGCATGAATCCCAGA +
Preference number: 5 (lower is better)
Translates to: CCYPLPFPALCTPCS*SPPLTRAPVCMNPR
Trigger: TCTGGGATTCATGCACACTGGGGCCCGGGTGAGTGGGGGTGAGCAAGAGCATGGAGTGCACAGGGCAGGGAATGGTAGTGGATAGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS GCA 90 bp CAGCGGGGAGCAGGGAGGAAGTGGGTGACAGGAAGGAATCAGAGCTaGCAGTTCCAGCTCACGCTTGTAGTGGCTCCGGAAAGCCTCATC +
Preference number: 5 (lower is better)
Translates to: QRGAGRKWVTGRNQS*QFQLTLVVAPESLI
Trigger: GATGAGGCTTTCCGGAGCCACTACAAGCGTGAGCTGGAACTGGCAGCTCTGATTCCTTCCTGTCACCCACTTCCTCCCTGCTCCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555222.5
CDS CCA 90 bp ACACACACACACTCCTCTCCCGTCCTCCCTCTTCAGTGTAAGCAGTaGCTGCCCCAGCCCGCTGTTTCCGGCTTCTCCTTCTACCCAGGT +
Preference number: 5 (lower is better)
Translates to: THTHSSPVLPLQCKQ*LPQPAVSGFSFYPG
Trigger: ACCTGGGTAGAAGGAGAAGCCGGAAACAGCGGGCTGGGGCAGCCACTGCTTACACTGAAGAGGGAGGACGGGAGAGGAGTGTGTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553275.1
ENST00000553533.2
CDS CCA 90 bp TACAGGATGCGACCTGAACGACAGTGTGCACAGCCCCGCTGGAACTaGCTTTTATGCATCTTGGTCCACTCCAAGGCCCTCCCGCCTGGC +
Preference number: 5 (lower is better)
Translates to: YRMRPERQCAQPRWN*LLCILVHSKALPPG
Trigger: GCCAGGCGGGAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACACTGTCGTTCAGGTCGCATCCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CCA 90 bp GGCACCTGGGCTGAAGGGGGTTCTGTGATCTGTTGGCCTAGGGTCTaGGTGGGAGGTTCATTCTCAGTGCCTACACCCCCTGTGGAAACC +
Preference number: 5 (lower is better)
Translates to: GTWAEGGSVICWPRV*VGGSFSVPTPPVET
Trigger: GGTTTCCACAGGGGGTGTAGGCACTGAGAATGAACCTCCCACCCAGACCCTAGGCCAACAGATCACAGAACCCCCTTCAGCCCAGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: CALQVQACWGVSQSLNFPPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: CALQVQACWGVSQSLNFPDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAELPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCCCACCCAGGGTCCCTaGAGCTGCTTCCCATTCCCC +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSPTQGP*SCFPFP
Trigger: GGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS GCA 90 bp CGACCTGAACGACAGTGTGCACAGCCCCGCTGGAACTGGCTTTTATaGATCTTGGTCCACTCCAAGGCCCTCCCGCCTGGCTTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: RPERQCAQPRWNWLL*ILVHSKALPPGFFL
Trigger: GAGAAAGAAGCCAGGCGGGAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACACTGTCGTTCAGGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 90 bp CTCCGGAGACAGCGTTTGGTGAGGTCCAGGACACCATCAAACCACTaGCAAAAGGTGAAGCCACGGCCCAGCAGGATCTCCTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LRRQRLVRSRTPSNH*QKVKPRPSRISCFG
Trigger: CCCAAAGCAGGAGATCCTGCTGGGCCGTGGCTTCACCTTTTGGCAGTGGTTTGATGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS CCA 90 bp CTGCGTGTGGGCTCATTGCTCTTGGGGCATCTGGGTGCAGCTGAATaGTACTGCAGGAAGGCCCCTGACTTGGTAGTGCTGGGTATGAGC +
Preference number: 5 (lower is better)
Translates to: LRVGSLLLGHLGAAE*YCRKAPDLVVLGMS
Trigger: GCTCATACCCAGCACTACCAAGTCAGGGGCCTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CCA 90 bp TCAGAAGGGAAGCGCAAGGTCTGGGATCCTCGTCCGCCCGCTTGGTaGCCTAAACTCGCTTATCTCAACCCCTATCTGCCCGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SEGKRKVWDPRPPAW*PKLAYLNPYLPESS
Trigger: AGAGGACTCGGGCAGATAGGGGTTGAGATAAGCGAGTTTAGGCCACCAAGCGGGCGGACGAGGATCCCAGACCTTGCGCTTCCCTTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS CCA 90 bp AACTCAGAAGGGAAGCGCAAGGTCTGGGATCCTCGTCCGCCCGCTTaGTGGCCTAAACTCGCTTATCTCAACCCCTATCTGCCCGAGTCC +
Preference number: 5 (lower is better)
Translates to: NSEGKRKVWDPRPPA*WPKLAYLNPYLPES
Trigger: GGACTCGGGCAGATAGGGGTTGAGATAAGCGAGTTTAGGCCACCAAGCGGGCGGACGAGGATCCCAGACCTTGCGCTTCCCTTCTGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS CCA 90 bp GGACTTGGAGGTTGCCTCCCAAACTCAGAAGGGAAGCGCAAGGTCTaGGATCCTCGTCCGCCCGCTTGGTGGCCTAAACTCGCTTATCTC +
Preference number: 5 (lower is better)
Translates to: GLGGCLPNSEGKRKV*DPRPPAWWPKLAYL
Trigger: GAGATAAGCGAGTTTAGGCCACCAAGCGGGCGGACGAGGATCCCAGACCTTGCGCTTCCCTTCTGAGTTTGGGAGGCAACCTCCAAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS-3UTR CAA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCGACATGATCTGGGACTaGGAGGTTGCCTCGGCAACC +
Preference number: 5 (lower is better)
Translates to: HPGSLELLPIPLGLRPNIDMIWD*EVASAT
Trigger: GGTTGCCGAGGCAACCTCCAAGTCCCAGATCATGTC...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGAAGGGTGCTGATGTGTaGCAAGATGGTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWKGADV*QDGAPL
Trigger: GAGGGGAGCACCATCTTGCAACACATCAGCACCCTT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCAGGCAGCTGTCTTCCACAAGGGTGCTGATGTGTaGCAAGATGGTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: PSALRKRCHWLAQAAVFHKGADV*QDGAPL
Trigger: GAGGGGAGCACCATCTTGCAACACATCAGCACCCTT...GTGGAAGACAGCTGCCTGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGTGCAGAGACACTaGGCCAGCCTCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPAVQRH*ASLSPL
Trigger: AAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAGC...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TCGGTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCAAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: SVLQPPQACLKLEFFLLPSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...TGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EYLGVSICQRGQHTCCCLLTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...AAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRSWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: CALQVQACWGVSQSLNFPWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCCACCCAGGGTCCCTaGAGCTGCTTCCCATTCCCC +
Preference number: 5 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHPTQGP*SCFPFP
Trigger: GGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGG...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS GCA 90 bp TTGGAGGTTGCCTTTCAGGTCCTCCAGCTCTGCGTGTGGGCTCATTaGTCTTGGGGCATCTGGGTGCAGCTGAATGGTACTGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LEVAFQVLQLCVWAH*SWGIWVQLNGTAGR
Trigger: CCTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCAACCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS GCA 90 bp AGTGTTTGCTGCTATCCACTACCATTCCCTGCCCTGTGCACTCCATaGTCTTGCTCACCCCCACTCACCCGGGCCCCAGTGTGCATGAAT +
Preference number: 5 (lower is better)
Translates to: SVCCYPLPFPALCTP*SCSPPLTRAPVCMN
Trigger: ATTCATGCACACTGGGGCCCGGGTGAGTGGGGGTGAGCAAGAGCATGGAGTGCACAGGGCAGGGAATGGTAGTGGATAGCAGCAAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS CCA 90 bp GAACTGGCTTTTATGCATCTTGGTCCACTCCAAGGCCCTCCCGCCTaGCTTCTTTCTCTCACCTGTAGGGCCTTCAGCAGGGTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELAFMHLGPLQGPPA*LLSLTCRAFSRVSC
Trigger: GCAGCTGACCCTGCTGAAGGCCCTACAGGTGAGAGAAAGAAGCCAGGCGGGAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CCA 90 bp CACTTGTACAGGATGCGACCTGAACGACAGTGTGCACAGCCCCGCTaGAACTGGCTTTTATGCATCTTGGTCCACTCCAAGGCCCTCCCG +
Preference number: 5 (lower is better)
Translates to: HLYRMRPERQCAQPR*NWLLCILVHSKALP
Trigger: CGGGAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACACTGTCGTTCAGGTCGCATCCTGTACAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTASSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGCTGTGCAGAGACACTaGGCCAGCCTCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLAVQRH*ASLSPL
Trigger: AAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAGC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSESDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAGCGATGCCCGGGTCTaGGGCTCAAGCTCCCCACCA +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSDARV*GSSSPP
Trigger: TGGTGGGGAGCTTGAGCCCAAGACCCGGGCATCGCT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: RAAGAGMLGCVSEPELPFVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...GAAGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGGGAGCAGCCCCCGGTaGGTCCCCACCTCAGCCATG +
Preference number: 5 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFGSSPR*VPTSAM
Trigger: CATGGCTGAGGTGGGGACCAACCGGGGGCTGCTCCC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCCTGGCTCCCAGGCAGCATTGGAGGTGTGGAGCCATACGTAGATGTCACAGCCCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PWLPGSIGGVEPYVDVTALRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...GGCTGTGACATCTACGTATGGCTCCACACCTCCAATGCTGCCTGGGAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: KGSWRWMGQQKRCSRQGPKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...AGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGAGAGGCCAGCACACTaGCTGCTGTCTTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRERPAH*LLSSVQ
Trigger: CTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTGGGACTTGGAGGTaGCCTCGGAGGCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGSGTWR*PRRQPL
Trigger: GAGGGGTTGCCTCCGAGGCAACCTCCAAGTCCCAGA...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454075.7
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTCTGGGACTTGGAGGTaGCCCCGCCGTTGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSSGTWR*PRRCSC
Trigger: GCAGGAGCAACGGCGGGGCAACCTCCAAGTCCCAGA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS GCA 90 bp GTGGGCTCATTGCTCTTGGGGCATCTGGGTGCAGCTGAATGGTACTaGAGGAAGGCCCCTGACTTGGTAGTGCTGGGTATGAGCGATAGA +
Preference number: 5 (lower is better)
Translates to: VGSLLLGHLGAAEWY*RKAPDLVVLGMSDR
Trigger: TCTATCGCTCATACCCAGCACTACCAAGTCAGGGGCCTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CCA 90 bp ATAGGCCTTTCTCTAGCCCAAGAGAGAAAGGTCCTCTGGAGTGAGTaGGCACCGCTTTCCTCTGCATCCCCTTGCAGAGTGACCAGCCTC +
Preference number: 5 (lower is better)
Translates to: IGLSLAQERKVLWSE*APLSSASPCRVTSL
Trigger: GAGGCTGGTCACTCTGCAAGGGGATGCAGAGGAAAGCGGTGCCCACTCACTCCAGAGGACCTTTCTCTCTTGGGCTAGAGAAAGGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543873.6
ENST00000554663.5
ENST00000555104.5
ENST00000557635.5
CDS CCA 90 bp ATCTGGGACTTGGAGGTTGCCTTTCAGGTCCTCCAGCTCTGCGTGTaGGCTCATTGCTCTTGGGGCATCTGGGTGCAGCTGAATGGTACT +
Preference number: 5 (lower is better)
Translates to: IWDLEVAFQVLQLCV*AHCSWGIWVQLNGT
Trigger: AGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCAACCTCCAAGTCCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS-3UTR CAA 90 bp TCTGAGTCGCTGAAGCGGAGGAGAAAGGTTCCGTCGGGCTCATTGAGAAGAAGGGACATGATCTGGGACTaGGAGGTTGCCTCGGCAACC +
Preference number: 5 (lower is better)
Translates to: SESLKRRRKVPSGSLRRRDMIWD*EVASAT
Trigger: GGTTGCCGAGGCAACCTCCAAGTCCCAGATCATGTC...CCTTCTTCTCAATGAGCCCGACGGAACCTTTCTCCTCCGCTTCAGCGACTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCAAGGGTGCTGATGTGTaGCAAGATGGTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCKGADV*QDGAPL
Trigger: GAGGGGAGCACCATCTTGCAACACATCAGCACCCTT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCGCTGTGCAGAGACACTaGGCCAGCCTCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLAVQRH*ASLSPL
Trigger: AAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAGC...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGGCTGTGCAGAGACACTaGGCCAGCCTCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLAVQRH*ASLSPL
Trigger: AAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAGC...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGCTGTGCAGAGACACTaGGCCAGCCTCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLAVQRH*ASLSPL
Trigger: AAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAGC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGATTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRFSTRA*AASSSP
Trigger: TGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAA...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TTAGGTCCATGTGGGACATTGAGATCCCAGATTGCCCATAGTGGGAGGGCTGCAAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LGPCGTLRSQIAHSGRAASWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...TGCAGCCCTCCCACTATGGGCAATCTGGGATCTCAATGTCCCACATGGACCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: HPGSLELLPIPLGLRPNIVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCCTCAGCCCCCTTCTGCAGGGCTTCTCGGAGAAGGTGGATCTCCCCTACTCGATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: SLSPLLQGFSEKVDLPYSIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...CGAGTAGGGGAGATCCACCTTCTCCGAGAAGCCCTGCAGAAGGGGGCTGAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp CTCCTATGCTCCCACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LLCSHPGSLELLPIPLGLHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...CAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTGGGAGCATAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGGGCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: QGKTCTSNHMSRPLLCSHLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...GTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCATCAGATTCCTCATCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPIRFLI*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGATGAGGAATCTGAT...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGACATGATCTGGGACTaGGAGGTTGCCCCGCCGTTG +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGDMIWD*EVAPPL
Trigger: CAACGGCGGGGCAACCTCCAAGTCCCAGATCATGTC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS TCA 90 bp TCCAATAGGCCTTTCTCTAGCCCAAGAGAGAAAGGTCCTCTGGAGTaGGTGGGCACCGCTTTCCTCTGCATCCCCTTGCAGAGTGACCAG +
Preference number: 5 (lower is better)
Translates to: SNRPFSSPREKGPLE*VGTAFLCIPLQSDQ
Trigger: CTGGTCACTCTGCAAGGGGATGCAGAGGAAAGCGGTGCCCACTCACTCCAGAGGACCTTTCTCTCTTGGGCTAGAGAAAGGCCTATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543873.6
ENST00000554663.5
ENST00000555104.5
ENST00000557635.5
CDS GCA 90 bp AAACCCAGCTGCCTCTCCCCCGACGGCTCTTGCACCCAGGACAACTaGCACCACTTACAGTGCTTTGTGGCAAATTGGAAAGTGTTCCCA +
Preference number: 5 (lower is better)
Translates to: KPSCLSPDGSCTQDN*HHLQCFVANWKVFP
Trigger: TGGGAACACTTTCCAATTTGCCACAAAGCACTGTAAGTGGTGGCAGTTGTCCTGGGTGCAAGAGCCGTCGGGGGAGAGGCAGCTGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CCA 90 bp CTCCCAGGCCTCTCAGAGGGATGGAAAATGGAGAGGTCCCTTCTCTaGACGTTTCTGCTCCAAGACCTTCATGCCCCTCTTTCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LPGLSEGWKMERSLL*TFLLQDLHAPLSSS
Trigger: ACTGGAGGAAAGAGGGGCATGAAGGTCTTGGAGCAGAAACGTCCAGAGAAGGGACCTCTCCATTTTCCATCCCTCTGAGAGGCCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553275.1
ENST00000557635.5
CDS CCA 90 bp GGACTTGGAGGTTGCCTCTCCCAGGCCTCTCAGAGGGATGGAAAATaGAGAGGTCCCTTCTCTGGACGTTTCTGCTCCAAGACCTTCATG +
Preference number: 5 (lower is better)
Translates to: GLGGCLSQASQRDGK*RGPFSGRFCSKTFM
Trigger: CATGAAGGTCTTGGAGCAGAAACGTCCAGAGAAGGGACCTCTCCATTTTCCATCCCTCTGAGAGGCCTGGGAGAGGCAACCTCCAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553275.1
ENST00000557635.5
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAAGGGTGCTGATGTGTaGCAAGATGGTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPKGADV*QDGAPL
Trigger: GAGGGGAGCACCATCTTGCAACACATCAGCACCCTT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCAGTAGCATGGCCAGGGCCTCACTTGGCCCAGTCCCATTAGCAGGAGTTTCTTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: CSSMARASLGPVPLAGVSSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...AGAAACTCCTGCTAATGGGACTGGGCCAAGTGAGGCCCTGGCCATGCTACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSFSTRA*AASSSP
Trigger: TGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAA...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CALQVQACWGVSQSLNFPHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSSWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGAAGCCTTCCATATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: FLPIRPRPWVRMGGEAFHISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...ATGGAAGGCTTCTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGTGTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CVCALQVQACWGVSQSLNSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...GTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCACACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCAGTGCCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: VLQPPQACLKLEFFLLPVPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...CACTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: VNVSVCSCLSVLGPGSEWLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...CCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: AASHSPRAETQYPLSLASVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: QQRREYVFTNPSALRKRCLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...ACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGCTGGCGGTGGATGGGGCAACAGAAAAGATGCAGCAGGCAGGGCCCTCTCCTGGCTAACAGGAATTaGGGGCTTTGGGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: GSWRWMGQQKRCSRQGPLLANRN*GLWEIF
Trigger: AAAAATCTCCCAAAGCCCCAAATTCCTGTTAGCCAG...GAGAGGGCCCTGCCTGCTGCATCTTTTCTGTTGCCCCATCCACCGCCAGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp ATGCAGCAGGCAGGGCCCTCTCATACACTGGAGGGCCACATGGCCAGGCCTGGATCAGCCCTTGTACTTTaGCATAGTCTCATACACGTA +
Preference number: 5 (lower is better)
Translates to: MQQAGPSHTLEGHMARPGSALVL*HSLIHV
Trigger: TACGTGTATGAGACTATGCAAAAGTACAAGGGCTGA...TCCAGGCCTGGCCATGTGGCCCTCCAGTGTATGAGAGGGCCCTGCCTGCTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS CCA 90 bp GAGTGTGGTGGGTACACACCATATCTGGGCCAAGCTGCATGCTCATaGAGGAATCAGGGGCCATTCCAAGGTCATAAGAAGGCACCATGG +
Preference number: 5 (lower is better)
Translates to: ECGGYTPYLGQAACS*RNQGPFQGHKKAPW
Trigger: CCATGGTGCCTTCTTATGACCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTGTACCCACCACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555318.1
CDS CCA 90 bp CATTCCAAGGTCATAAGAAGGCACCATGGTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTCCCTGGAGGAGGGAAGGAGGTACAT +
Preference number: 5 (lower is better)
Translates to: HSKVIRRHHGRHLEL*GRKWLVPGGGKEVH
Trigger: ATGTACCTCCTTCCCTCCTCCAGGGACCAACCACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGTGCCTTCTTATGACCTTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555222.5
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGACATGATCTGGGACTaGGAGGTTGCCTCGGCAACC +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLDMIWD*EVASAT
Trigger: GGTTGCCGAGGCAACCTCCAAGTCCCAGATCATGTC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAAGGGTGCTGATGTGTaGCAAGATGGTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLKGADV*QDGAPL
Trigger: GAGGGGAGCACCATCTTGCAACACATCAGCACCCTT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553533.2
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGAAGGGTGCTGATGTGTaGCAAGATGGTGCTCCCCTC +
Preference number: 5 (lower is better)
Translates to: ATWTHLGTVRLQIQSIWGKGADV*QDGAPL
Trigger: GAGGGGAGCACCATCTTGCAACACATCAGCACCCTT...CCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CTCCCCATCTGCTGCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LPICCLAGHEQVSRAGLWKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...CCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: CALQVQACWGVSQSLNFPKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAAGCTGTGCAGAGACACTaGGCCAGCCTCAGCCCCCTT +
Preference number: 5 (lower is better)
Translates to: LKLEFFLLPVERHWQVAEAVQRH*ASLSPL
Trigger: AAGGGGGCTGAGGCTGGCCAAGTGTCTCTGCACAGC...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLFSTRA*AASSSP
Trigger: TGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLSWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGGGAGGCAGCAGAGGAGGGAATATGTCTTCACCAATCCAAGTGCCCTGAGGGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: SGRQQRREYVFTNPSALRVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...CCTCAGGGCACTTGGATTGGTGAAGACATATTCCCTCCTCTGCTGCCTCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCTTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: CALQVQACWGVSQSLNFPSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...AGGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000300134.8
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCAGCAGGATCTCCTaGTTGAACTGCGACCAGGAC +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSPSRIS*LNCDQD
Trigger: GTCCTGGTCGCAGTTCAACAAGGAGATCCTGCTGGG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCACGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCTCCCCATCTGCTGCTaGGCAGGGCATGAGCAAGTG +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSLPICC*AGHEQV
Trigger: CACTTGCTCATGCCCTGCCAAGCAGCAGATGGGGAG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCGAGAGGCCAGCACACTaGCTGCTGTCTTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSERPAH*LLSSVQ
Trigger: CTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTC...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGCGCGCTGCAGGTGCAGGCATGTTGGGGTGTGTCTCAGAGCCTGAACTTCCCCCAAATTCAGAGTATTaGGGGGTTAGCATATGTCAG +
Preference number: 5 (lower is better)
Translates to: VRAAGAGMLGCVSEPELPPNSEY*GVSICQ
Trigger: CTGACATATGCTAACCCCCAAATACTCTGAATTTGG...GGGAAGTTCAGGCTCTGAGACACACCCCAACATGCCTGCACCTGCAGCGCGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGGCCACTTGGACCCACTaGGGCACAGTCAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: RCHSHLDPLGHSQTPNSEATWTH*GTVRLQ
Trigger: TTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC...CTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGACATGATCTGGGACTaGGAGGTTGCCCCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLDMIWD*EVAPPA
Trigger: AGCAGGAGGGGCAACCTCCAAGTCCCAGATCATGTC...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543873.6
CDS GCA 90 bp GTCCGCCCGCTTGGTGGCCTAAACTCGCTTATCTCAACCCCTATCTaGCCGAGTCCTCTGATTGTGGGACCACAGGATCGAAAGTTAAAA +
Preference number: 5 (lower is better)
Translates to: VRPLGGLNSLISTPI*PSPLIVGPQDRKLK
Trigger: TTTTAACTTTCGATCCTGTGGTCCCACAATCAGAGGACTCGGGCAGATAGGGGTTGAGATAAGCGAGTTTAGGCCACCAAGCGGGCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS CCA 90 bp ACAGACCACTCCCATTCCTGTCTTTCCAGCTCCTTACACCATATCTaGGCCAAGCTGCATGCTCATGGAGGAATCAGGGGCCATTCCAAG +
Preference number: 5 (lower is better)
Translates to: TDHSHSCLSSSLHHI*AKLHAHGGIRGHSK
Trigger: CTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTAAGGAGCTGGAAAGACAGGAATGGGAGTGGTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554202.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGACATGATCTGGGACTaGGAGGTTGCCTCGGCAACC +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSDMIWD*EVASAT
Trigger: GGTTGCCGAGGCAACCTCCAAGTCCCAGATCATGTC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GCAGTGTCTCACCCTCCCAAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: AVSHPPKFVLSRRQKQIDRALAK*QQKASE
Trigger: CTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCT...GTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TCGGTGCTGCAGCCTCCGCAAGCCTGTCTTAAACTTGAGTTCTTCCTGCTTCCATCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: SVLQPPQACLKLEFFLLPSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...TGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTTGCGGAGGCTGCAGCACCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLFSTRA*AASSSP
Trigger: TGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSFSTRA*AASSSP
Trigger: TGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAA...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: AASHSPRAETQYPLSLASHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...AGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCCCCAGGAACCTCAAGCCCAACAGGAATCGAACTCCAGCCTGGAACTTGGTCTCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: PPGTSSPTGIELQPGTWSHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...AGACCAAGTTCCAGGCTGGAGTTCGATTCCTGTTGGGCTTGAGGTTCCTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp CACCCAGGGTCCCTTGAGCTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: HPGSLELLPIPLGLRPNISILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...GATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAGCTCAAGGGACCCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTCTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFLRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: EFFLLPVERHWQVAELFHWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...ATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp ATCACCAACTGGGGTTGGCCCTTAGGTCCATGTGGGACATTGAGATCCCAGATTTGGGGTAGGAAGTGGTaGGTCCCTTTCCACGGTCAT +
Preference number: 5 (lower is better)
Translates to: ITNWGWPLGPCGTLRSQIWGRKW*VPFHGH
Trigger: ATGACCGTGGAAAGGGACCAACCACTTCCTACCCCA...AATCTGGGATCTCAATGTCCCACATGGACCTAAGGGCCAACCCCAGTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTAGAAGAGCTGTCTCTTaGGGTTCTCCCTCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSRRAVS*GSPSSW
Trigger: CCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCGAGAGGCCAGCACACTaGCTGCTGTCTTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PLSLASSVNVSVCSCLSVERPAH*LLSSVQ
Trigger: CTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTC...GACGGATAGGCAGGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGACATGATCTGGGACTaGGAGGTTGCCTCGGAGGCA +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSDMIWD*EVASEA
Trigger: TGCCTCCGAGGCAACCTCCAAGTCCCAGATCATGTC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454075.7
CDS-3UTR CAA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACGACATGATCTGGGACTaGGAGGTTGCCCCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: FFLLPVERHWQVAELFHNDMIWD*EVAPPA
Trigger: AGCAGGAGGGGCAACCTCCAAGTCCCAGATCATGTC...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555104.5
CDS CCA 90 bp GGTAGGAAGTGGTTGGTCCCTTTCCACGGTCATCTTGATGGTAGCTaGGACATAACCCCTGCCATCCTTACCCATCTGTTCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: GRKWLVPFHGHLDGS*DITPAILTHLFSCC
Trigger: ACAACAGCTGAACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAGCTACCATCAAGATGACCGTGGAAAGGGACCAACCACTTCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554202.1
CDS CCA 90 bp TCTTTCCAGCTCCTTACACCATATCTGGGCCAAGCTGCATGCTCATaGAGGAATCAGGGGCCATTCCAAGGTCATAAGAAGGCACCATGG +
Preference number: 5 (lower is better)
Translates to: SFQLLTPYLGQAACS*RNQGPFQGHKKAPW
Trigger: CCATGGTGCCTTCTTATGACCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTAAGGAGCTGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554202.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATACTGACCAGCGGAGGCTaGGCTGGGGCCCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: CGHATKVPAIHLTYPRYILTSGG*AGAPRN
Trigger: GTTCCTGGGGGCCCCAGCCAAGCCTCCGCTGGTCAG...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GCTTGGCAGGGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: AWQGMSKCPEQVCGGSRRKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...TCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCCCTGCCAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTATCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp ATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: MSKCPEQVCGGSRRAVSLFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...CAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TGTGGAGCCATACGTAGATGTCACAGCCACTTGGACCCACTTGGGCACAGTCAGATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: CGAIRRCHSHLDPLGHSQIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...CTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTGACATCTACGTATGGCTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000300134.8
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CTTAAACTTGAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAAGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: LKLEFFLLPVERHWQVAEDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...TTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTCAAGTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCAGAATGGGCGGAGGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCA +
Preference number: 5 (lower is better)
Translates to: VSVCSCLSVLGPGSEWAEEESQP*YFCIVS
Trigger: TGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTC...CTCCGCCCATTCTGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGCATGAGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTCCTCCCAAATTTGTGTaGTCACGTAGGCAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: GMSKCPEQVCGGSRRAVSPPKFV*SRRQKQ
Trigger: CTGCTTTTGCCTACGTGACAACACAAATTTGGGAGG...AGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCTCATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTACTCACCCTCCCAAATTaGTGTTGTCACGTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLLTLPN*CCHVGK
Trigger: TTTGCCTACGTGACAACACAAATTTGGGAGGGTGAG...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GCAGTGTCTCACCCTCCCAAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACGCCACTTGGACCCACTaGGGCACAGTCAGACTCCAA +
Preference number: 5 (lower is better)
Translates to: AVSHPPKFVLSRRQKQIDATWTH*GTVRLQ
Trigger: TTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGC...GTCTATCTGCTTTTGCCTACGTGACAACACAAATTTGGGAGGGTGAGACACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS GCA 90 bp TCCCCCGACGGCTCTTGCACCCAGGACAACTGCCACCACTTACAGTaGTTTGTGGCAAATTGGAAAGTGTTCCCACCCAATAAACCAAAT +
Preference number: 5 (lower is better)
Translates to: SPDGSCTQDNCHHLQ*FVANWKVFPPNKPN
Trigger: ATTTGGTTTATTGGGTGGGAACACTTTCCAATTTGCCACAAAGCACTGTAAGTGGTGGCAGTTGTCCTGGGTGCAAGAGCCGTCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 90 bp TTCCTGTCTTTCCAGCTCCTTACACCATATCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGGCCATTCCAAGGTCATAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: FLSFQLLTPYLGQAA*SWRNQGPFQGHKKA
Trigger: TGCCTTCTTATGACCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTAAGGAGCTGGAAAGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554202.1
CDS CCA 90 bp TCCATACCACCACACTCACCTTTCCACGGTCATCTTGATGGTAGCTaGGACATAACCCCTGCCATCCTTACCCATCTGTTCAGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: SIPPHSPFHGHLDGS*DITPAILTHLFSCC
Trigger: ACAACAGCTGAACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAGCTACCATCAAGATGACCGTGGAAAGGTGAGTGTGGTGGTATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555222.5
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CTGCTTCCCATTCCCCTAGGGCTGAGACCCAATATCCTCTATCCCTGGCCTCTAAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: LLPIPLGLRPNILYPWPLKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...TAGAGGCCAGGGATAGAGGATATTGGGTCTCAGCCCTAGGGGAATGGGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGCAAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SKCPEQVCGGSRRAVSLGHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...ACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCGTGGCTTTGGCATTGTaGTCTTGGTTGCCATGGACG +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSVALAL*SWLPWT
Trigger: CGTCCATGGCAACCAAGACAACAATGCCAAAGCCAC...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACACTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSCFQWKGIGKWRNCSITLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...TGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGACCCAATATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCGATCACCAACTGGGGTaGGCCCTTAGGTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: ETQYPLSLASSVNVSVCSDHQLG*ALRSMW
Trigger: CCACATGGACCTAAGGGCCAACCCCAGTTGGTGATC...GGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATATTGGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp TTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: FFLLPVERHWQVAELFHNKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...GTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: LAYVREASTLAAVFCAVSKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GCCCTTCCGCTCACACCGCTTGATCTTCTTGAGAAGCAGGTTCTTGAACAGGGCCTGGCTAACAGGAATTaGGGGCTTTGGGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: ALPLTPLDLLEKQVLEQGLANRN*GLWEIF
Trigger: AAAAATCTCCCAAAGCCCCAAATTCCTGTTAGCCAG...GCCCTGTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAAGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp AGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCAGCTGGGGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCA +
Preference number: 5 (lower is better)
Translates to: RSVGVVEELSLWVLPPAGEESQP*YFCIVS
Trigger: TGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTC...CCCAGCTGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCA +
Preference number: 5 (lower is better)
Translates to: PEQVCGGSRRAVSLGSPSEESQP*YFCIVS
Trigger: TGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTC...GGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACCTCACCCTCCCAAATTaGTGTTGTCACGTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: AYVREASTLAAVFCAVSHLTLPN*CCHVGK
Trigger: TTTGCCTACGTGACAACACAAATTTGGGAGGGTGAG...GTGAGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GGTGGGCAGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCCCAAATTCAGAGTATTaGGGGGTTAGCATATGTCAG +
Preference number: 5 (lower is better)
Translates to: GGQGNDRKEGVDWLHPLCPNSEY*GVSICQ
Trigger: CTGACATATGCTAACCCCCAAATACTCTGAATTTGG...GCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCTGCCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS TCA 90 bp AAGTCAGGACCACTGAGTGAGGAAACAAGCTCCAGCTCCTTATCCTaGCTTAGTCATGGCCTGGGCAAGCTATTTCTATGCTCTGAGCTC +
Preference number: 5 (lower is better)
Translates to: KSGPLSEETSSSSLS*LSHGLGKLFLCSEL
Trigger: GAGCTCAGAGCATAGAAATAGCTTGCCCAGGCCATGACTAAGTCAGGATAAGGAGCTGGAGCTTGTTTCCTCACTCAGTGGTCCTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557563.5
CDS-3UTR CAA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACAAGATGCCGCAGGTGTaGGGGAAAGTCGACATAGAG +
Preference number: 5 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHKMPQV*GKVDIE
Trigger: CTCTATGTCGACTTTCCCCAACACCTGCGGCATCTT...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACTCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GCAAAACCTGTACTAGTAACCACATGTCCAGACCCCTCCTATGCTCCCACCCAGAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: AKPVLVTTCPDPSYAPTQKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...CTGGGTGGGAGCATAGGAGGGGTCTGGACATGTGGTTACTAGTACAGGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: KCPEQVCGGSRRAVSLGSIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...AGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGATAGTGGCTTTGGCATaGTTGTCTTGGTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: GNDRKEGVDWLHPLCILLIVALA*LSWLPW
Trigger: CCATGGCAACCAAGACAACAATGCCAAAGCCACTAT...CAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTGTCCAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVQSRSVGVVEELSLWVLSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...GAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTGGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: QTPNSEYLGVSICQRGQHVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...GTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTGTTCCGTCGGGCTCATaGAGAAGAAGGCTAGTAACG +
Preference number: 5 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFVPSGS*RRRLVT
Trigger: CGTTACTAGCCTTCTTCTCAATGAGCCCGACGGAAC...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTAAAGGAAGGAGTGGATaGGCTCCACCCACTGTGCAT +
Preference number: 5 (lower is better)
Translates to: RKEGVDWLHPLCILLLVFKGRSG*APPTVH
Trigger: ATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTT...AAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp CAGAGCAGGTCTGTGGGGGTAGTAGAAGAGCTGTCTCTTTGGGTTCTCCCTCCATCAGCCCTTGTACTTTaGCATAGTCTCATACACGTA +
Preference number: 5 (lower is better)
Translates to: QSRSVGVVEELSLWVLPPSALVL*HSLIHV
Trigger: TACGTGTATGAGACTATGCAAAAGTACAAGGGCTGA...TGGAGGGAGAACCCAAAGAGACAGCTCTTCTACTACCCCCACAGACCTGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp GAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EGVDWLHPLCILLLVFSSKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...GGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGTTCTTCCTGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EFFLLPVERHWQVAELFHKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...ATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCAGGAAGAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000555104.5
CDS-3UTR CAA 90 bp GGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: GRSGLAPPTVHSPVSLFLKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...GAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGGGAATGATAGAAAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: RGMIERKEWIGSTHCAFSKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...GGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTTTCTATCATTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp ATATGTCTTCACCAATCCAAGTGCCCTGAGGAAACGCTGTCACTGGCTGGCTCAAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: ICLHQSKCPEETLSLAGSKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...TGAGCCAGCCAGTGACAGCGTTTCCTCAGGGCACTTGGATTGGTGAAGACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCACAGGATAGTGGCTTaGGCATTGTTGTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LAYVREASTLAAVFCAVSHRIVA*ALLSWL
Trigger: CAACCAAGACAACAATGCCAAAGCCACTATCCTGTG...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGGAAGAATCTCAGCCCTaGTACTTTTGCATAGTCTCA +
Preference number: 5 (lower is better)
Translates to: GLAYVREASTLAAVFCAVEESQP*YFCIVS
Trigger: TGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTC...CACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TCTAGTGTAAATGTGTCTGTATGTTCCTGCCTATCCGTCCTAGGCCCTGGGTCACCTCCCAAATTTGTGTaGTCACGTAGGCAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: SSVNVSVCSCLSVLGPGSPPKFV*SRRQKQ
Trigger: CTGCTTTTGCCTACGTGACAACACAAATTTGGGAGG...TGACCCAGGGCCTAGGACGGATAGGCAGGAACATACAGACACATTTACACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTCACCCTCCCAAATTaGTGTTGTCACGTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: EYLGVSICQRGQHTCCCLLTLPN*CCHVGK
Trigger: TTTGCCTACGTGACAACACAAATTTGGGAGGGTGAG...AAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTTCCTGCTTTGGGAACTaGAACAAACTACATAACCCT +
Preference number: 5 (lower is better)
Translates to: GVSICQRGQHTCCCLLCSSCFGN*NKLHNP
Trigger: AGGGTTATGTAGTTTGTTCAAGTTCCCAAAGCAGGA...ACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS CCA 90 bp TGCACCCAGGACAACTGCCACCACTTACAGTGCTTTGTGGCAAATTaGAAAGTGTTCCCACCCAATAAACCAAATGGAAAAGCCCTCCTA +
Preference number: 5 (lower is better)
Translates to: CTQDNCHHLQCFVAN*KVFPPNKPNGKALL
Trigger: TAGGAGGGCTTTTCCATTTGGTTTATTGGGTGGGAACACTTTCCAATTTGCCACAAAGCACTGTAAGTGGTGGCAGTTGTCCTGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS-3UTR CAA 90 bp AAGGAAGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCAAGCCTGTCTTAAACTaGAGTTCTTCCTGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: KEGVDWLHPLCILLLVFSKPVLN*SSSCFQ
Trigger: CTGGAAGCAGGAAGAACTCAAGTTTAAGACAGGCTT...GGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCTTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000538913.6
ENST00000543873.6
ENST00000553533.2
ENST00000554764.6
ENST00000556155.5
ENST00000651176.1
CDS-3UTR CAA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTAAGGGCACAGTGTTGTaGATGATTTCTCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: LAYVREASTLAAVFCAVSKGTVL*MISPVL
Trigger: AAGCACTGGAGAAATCATCAACAACACTGTGCCCTT...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TGCTTCCAGTGGAAAGGCATTGGCAAGTGGCGGAACTGTTCCATAACAGCTTTTCACCGCTTGATCTTCTaGAGAAGCAGGTTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: CFQWKGIGKWRNCSITAFHRLIF*RSRFLN
Trigger: GTTCAAGAACCTGCTTCTCAAGAAGATCAAGCGGTG...AAAAGCTGTTATGGAACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554764.6
CDS-3UTR CAA 90 bp TTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGGGGGTTAGCATATGTCAGATTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: LGTVRLQIQSIWGLAYVRFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...TCTGACATATGCTAACCCCCAAATACTCTGAATTTGGAGTCTGACTGTGCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATAAGCTGGATGGGGAGTTaGCCGGGGCCAAGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: CGHATKVPAIHLTYPRYISWMGS*PGPSVK
Trigger: CTTCACACTTGGCCCCGGCAAACTCCCCATCCAGCT...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTCCATACTGAGGCTGTaGTCATTGAAGATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: SIWGLAYVREASTLAAVFSILRL*SLKIFW
Trigger: CCAGAAGATCTTCAATGACAACAGCCTCAGTATGGA...GAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATACTCCGGAGACAGCGTTaGGTGAGGTCCAGGACACCA +
Preference number: 5 (lower is better)
Translates to: CGHATKVPAIHLTYPRYILRRQR*VRSRTP
Trigger: TGGTGTCCTGGACCTCACCAAACGCTGTCTCCGGAG...TATGTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp TTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCTGTGCAGTGTCTCTGGCTAACAGGAATTaGGGGCTTTGGGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: LAYVREASTLAAVFCAVSLANRN*GLWEIF
Trigger: AAAAATCTCCCAAAGCCCCAAATTCCTGTTAGCCAG...AGACACTGCACAGAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGGAGTGGATTGGCTCCACCCACTGTGCATTCTCCTGTTAGTCTTTTCCTCCTGTCAGCCCTTGTACTTTaGCATAGTCTCATACACGTA +
Preference number: 5 (lower is better)
Translates to: RSGLAPPTVHSPVSLFLLSALVL*HSLIHV
Trigger: TACGTGTATGAGACTATGCAAAAGTACAAGGGCTGA...CAGGAGGAAAAGACTAACAGGAGAATGCACAGTGGGTGGAGCCAATCCACTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AATTTATTTTATGGCTTAGGATCTATGACCCCTGCCTTGAGAGGGAGAATGGGATCCAGTGGAAAGGCATaGGCAAGTGGCGGAACTGTT +
Preference number: 5 (lower is better)
Translates to: NLFYGLGSMTPALRGRMGSSGKA*ASGGTV
Trigger: AACAGTTCCGCCACTTGCCAATGCCTTTCCACTGGA...TCCCATTCTCCCTCTCAAGGCAGGGGTCATAGATCCTAAGCCATAAAATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR CAA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACTTCCGCTCACACCGCTaGATCTTCTTGAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYFRSHR*IFLRSR
Trigger: CCTGCTTCTCAAGAAGATCAAGCGGTGTGAGCGGAA...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp AATTTATTTTATGGCTTAGGATCTATGACCCCTGCCTTGAGAGGGAGAATGGGACTGAGGCTGTTGTCATaGAAGATCTTCTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NLFYGLGSMTPALRGRMGLRLLS*KIFWAR
Trigger: CCTGGCCCAGAAGATCTTCAATGACAACAGCCTCAG...TCCCATTCTCCCTCTCAAGGCAGGGGTCATAGATCCTAAGCCATAAAATAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300134.8
ENST00000651176.1
CDS-3UTR CAA 90 bp CACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACACCGAATGGACAGGTCTTaGGCAGAGAATGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: HSYTRRISALVLLHSLIHRMDRS*AENGWM
Trigger: CATCCAGCCATTCTCTGCCAAAGACCTGTCCATTCG...GTGTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CACAGCCACTTGGACCCACTTGGGCACAGTCAGACTCCAAATTCAGAGTATTTGTCAGCCCTTGTACTTTaGCATAGTCTCATACACGTA +
Preference number: 5 (lower is better)
Translates to: HSHLDPLGHSQTPNSEYLSALVL*HSLIHV
Trigger: TACGTGTATGAGACTATGCAAAAGTACAAGGGCTGA...CAAATACTCTGAATTTGGAGTCTGACTGTGCCCAAGTGGGTCCAAGTGGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGACCCAATATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCCCTCCCAAATTTGTGTaGTCACGTAGGCAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: ETQYPLSLASSVNVSVCSPPKFV*SRRQKQ
Trigger: CTGCTTTTGCCTACGTGACAACACAAATTTGGGAGG...GGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATATTGGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AGTATTTGGGGGTTAGCATATGTCAGAGAGGCCAGCACACTTGCTGCTGTCTTCCCAAATTCAGAGTATTaGGGGGTTAGCATATGTCAG +
Preference number: 5 (lower is better)
Translates to: SIWGLAYVREASTLAAVFPNSEY*GVSICQ
Trigger: CTGACATATGCTAACCCCCAAATACTCTGAATTTGG...GAAGACAGCAGCAAGTGTGCTGGCCTCTCTGACATATGCTAACCCCCAAATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp AAATTTGTGTTGTCACGTAGGCAAAAGCAGATAGACACATGTTCTATGTGGTCATTCAGCACTAGGGCTTaGGCTGCCTCTAGCTCTCCA +
Preference number: 5 (lower is better)
Translates to: KFVLSRRQKQIDTCSMWSFSTRA*AASSSP
Trigger: TGGAGAGCTAGAGGCAGCCAAAGCCCTAGTGCTGAA...TGACCACATAGAACATGTGTCTATCTGCTTTTGCCTACGTGACAACACAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS-3UTR CAA 90 bp GAGACCCAATATCCTCTATCCCTGGCCTCTAGTGTAAATGTGTCTGTATGTTCCCTGGCTAACAGGAATTaGGGGCTTTGGGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: ETQYPLSLASSVNVSVCSLANRN*GLWEIF
Trigger: AAAAATCTCCCAAAGCCCCAAATTCCTGTTAGCCAG...GGAACATACAGACACATTTACACTAGAGGCCAGGGATAGAGGATATTGGGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS CCA 90 bp ATTAAATGCGTTCTGAAGCTCAATCAGGGCCTCACCGTAGAGAAGTaGTTATTAGTCATCGCTATGGAACCAGACCTCCAGGTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: IKCVLKLNQGLTVEK*LLVIAMEPDLQVSN
Trigger: ATTTGAAACCTGGAGGTCTGGTTCCATAGCGATGACTAATAACCACTTCTCTACGGTGAGGCCCTGATTGAGCTTCAGAACGCATTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS-3UTR CAA 90 bp CACACAGCTATACACGAAGAATCTCAGCCCTTGTACTTTTGCATAGTCTCATACTCCAAGGGCACAGTGTaGTTGATGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: HTAIHEESQPLYFCIVSYSKGTV*LMISPV
Trigger: CACTGGAGAAATCATCAACAACACTGTGCCCTTGGA...GTATGAGACTATGCAAAAGTACAAGGGCTGAGATTCTTCGTGTATAGCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000554764.6
ENST00000651176.1
CDS-3UTR CAA 90 bp CTATGTGGTCATGCAACTAAGGTGCCAGCTATACATTTAACATATCCTAGGTACATCTCAGAGAAGGCATaGTCCCACAGGATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: LCGHATKVPAIHLTYPRYISEKA*SHRIVA
Trigger: AGCCACTATCCTGTGGGACAATGCCTTCTCTGAGAT...GTACCTAGGATATGTTAAATGTATAGCTGGCACCTTAGTTGCATGACCACATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300134.8
ENST00000553533.2
ENST00000651176.1
CDS TCA 90 bp AGGGGTTTCTTAGTGAAGCAAGAAGTTTCCTCAGGGGACTGGCTCTaGGCACTCAGAGAAGTTATTGGACTCACACATCATAATCAAAAA +
Preference number: 5 (lower is better)
Translates to: RGFLVKQEVSSGDWL*ALREVIGLTHHNQK
Trigger: TTTTTGATTATGATGTGTGAGTCCAATAACTTCTCTGAGTGCTCAGAGCCAGTCCCCTGAGGAAACTTCTTGCTTCACTAAGAAACCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS GCA 72 bp GGGACTTGGAGGTTGCCCCGCCGTTGCTCCTGCTGCTaGCCCTGCTCTCAGCTCTGGTCGCGGCGGCTATCG +
Preference number: 6 (lower is better)
Translates to: GTWRLPRRCSCC*PCSQLWSRRLS
Trigger: CGATAGCCGCCGCGACCAGAGCTGAGAGCAGGGGCAGCAGCAGGAGCAACGGCGGGGCAACCTCCAAGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS TCA 72 bp CCTGCTCTCAGCTCTGGTCGCGGCGGCTATCGACGGTaGGTGAGATTCCGCGTCCCCCTTGGACCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PALSSGRGGYRR*VRFRVPLGPLG
Trigger: CCCCAGGGGTCCAAGGGGGACGCGGAATCTCACTCACCGTCGATAGCCGCCGCGACCAGAGCTGAGAGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556155.5
CDS CCA 72 bp CAAGAGGTGAGGGTCCAGGGCCCTTGTGTGTGGCATTaGAGGAGGACTCGGGGTCCCAGATTGGGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QEVRVQGPCVWH*RRTRGPRLGQG
Trigger: GCCCTGCCCCAATCTGGGACCCCGAGTCCTCCTCCAATGCCACACACAAGGGCCCTGGACCCTCACCTCTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS GCA 72 bp TGCCTCGGAGGCAACCCCTCACCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCAGCGGGCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: CLGGNPSPRQPL*CLLPFSAGTSR
Trigger: CCTGGAAGTGCCCGCTGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGGTGAGGGGTTGCCTCCGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454075.7
CDS GCA 72 bp GTCGGAGCCGACCAGGAACTCCCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCAGCGGGCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: VGADQELPRQPL*CLLPFSAGTSR
Trigger: CCTGGAAGTGCCCGCTGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGGGAGTTCCTGGTCGGCTCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537215.6
CDS CCA 72 bp GGGTGGGAGGTTCATTCTCAGTGCCTACACCCCCTGTaGAAACCCAGCTGCCTCTCCCCCGACGGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: GWEVHSQCLHPL*KPSCLSPDGSC
Trigger: GCAAGAGCCGTCGGGGGAGAGGCAGCTGGGTTTCCACAGGGGGTGTAGGCACTGAGAATGAACCTCCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS TCA 72 bp GCCCCTCCACTAGGCCCACTTGTACAGGATGCGACCTaGACGACAGTGTGCACAGCCCCGCTGGAACTGGCT +
Preference number: 6 (lower is better)
Translates to: APPLGPLVQDAT*TTVCTAPLELA
Trigger: AGCCAGTTCCAGCGGGGCTGTGCACACTGTCGTTCAGGTCGCATCCTGTACAAGTGGGCCTAGTGGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 72 bp CGACAGTGTGCACAGCCCCGCTGGAACTGGCTTTTATaGATCTTGGTCCACTCCAAGGCCCTCCCGCCTGGC +
Preference number: 6 (lower is better)
Translates to: RQCAQPRWNWLL*ILVHSKALPPG
Trigger: GCCAGGCGGGAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACACTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 72 bp CATTCTCAGTGCCTACACCCCCTGTGGAAACCCAGCTaGCTCTCCCCCGACGGCTCTTGCACCCAGGACAAC +
Preference number: 6 (lower is better)
Translates to: HSQCLHPLWKPS*LSPDGSCTQDN
Trigger: GTTGTCCTGGGTGCAAGAGCCGTCGGGGGAGAGGCAGCTGGGTTTCCACAGGGGGTGTAGGCACTGAGAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 72 bp TGCTATCCACTACCATTCCCTGCCCTGTGCACTCCATaGTCTTGCTCACCCCCACTCACCCGGGCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: CYPLPFPALCTP*SCSPPLTRAPV
Trigger: CACTGGGGCCCGGGTGAGTGGGGGTGAGCAAGAGCATGGAGTGCACAGGGCAGGGAATGGTAGTGGATAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS CCA 72 bp CAGTCACAAGAGGTGAGGGTCCAGGGCCCTTGTGTGTaGCATTGGAGGAGGACTCGGGGTCCCAGATTGGGG +
Preference number: 6 (lower is better)
Translates to: QSQEVRVQGPCV*HWRRTRGPRLG
Trigger: CCCCAATCTGGGACCCCGAGTCCTCCTCCAATGCCACACACAAGGGCCCTGGACCCTCACCTCTTGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS TCA 72 bp CTGGGGGCATCTTGGAGACCAGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTGCCTCGGAGGCAACCC +
Preference number: 6 (lower is better)
Translates to: LGASWRPDPTET*SGTWRLPRRQP
Trigger: GGGTTGCCTCCGAGGCAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454075.7
CDS TCA 72 bp CTGGGGGCATCTTGGAGACCAGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTGCCTCTCCCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: LGASWRPDPTET*SGTWRLPLPGL
Trigger: GAGGCCTGGGAGAGGCAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000553275.1
ENST00000557635.5
CDS CCA 72 bp ATGTCCACCAGGCTTTCACACCTGGGGCCAGGACAGTaGTCAGGGGGCACAGGATTAAGGCTGCTTGCTCCG +
Preference number: 6 (lower is better)
Translates to: MSTRLSHLGPGQ*SGGTGLRLLAP
Trigger: CGGAGCAAGCAGCCTTAATCCTGTGCCCCCTGACCACTGTCCTGGCCCCAGGTGTGAAAGCCTGGTGGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CCA 72 bp GGTTGCCTCCCAAACTCAGAAGGGAAGCGCAAGGTCTaGGATCCTCGTCCGCCCGCTTGGTGGCCTAAACTC +
Preference number: 6 (lower is better)
Translates to: GCLPNSEGKRKV*DPRPPAWWPKL
Trigger: GAGTTTAGGCCACCAAGCGGGCGGACGAGGATCCCAGACCTTGCGCTTCCCTTCTGAGTTTGGGAGGCAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS CAA 90 bp GGTTGCCTTTCAGGTCCTCCAGCTCTGCGTGTGGGCTCATTGCTCTaGGGGCATCTGGGTGCAGCTGAATGGTACTGCAGGAAGGCCCCT +
Preference number: 6 (lower is better)
Translates to: GCLSGPPALRVGSLL*GHLGAAEWYCRKAP
Trigger: AGGGGCCTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CAA 90 bp TTGCTGCTATCCACTACCATTCCCTGCCCTGTGCACTCCATGCTCTaGCTCACCCCCACTCACCCGGGCCCCAGTGTGCATGAATCCCAG +
Preference number: 6 (lower is better)
Translates to: LLLSTTIPCPVHSML*LTPTHPGPSVHESQ
Trigger: CTGGGATTCATGCACACTGGGGCCCGGGTGAGTGGGGGTGAGCAAGAGCATGGAGTGCACAGGGCAGGGAATGGTAGTGGATAGCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS GCA 72 bp GGGGGTCCCTCTGATATATGCTCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCAGCGGGCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: GGPSDICSRQPL*CLLPFSAGTSR
Trigger: CCTGGAAGTGCCCGCTGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGAGCATATATCAGAGGGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538913.6
CDS GCA 72 bp TGGGACTTGGAGGTTGCCTTTCAGGTCCTCCAGCTCTaGGTGTGGGCTCATTGCTCTTGGGGCATCTGGGTG +
Preference number: 6 (lower is better)
Translates to: WDLEVAFQVLQL*VWAHCSWGIWV
Trigger: CACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCAACCTCCAAGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CCA 72 bp TTGGAGGTTGCCTTTCAGGTCCTCCAGCTCTGCGTGTaGGCTCATTGCTCTTGGGGCATCTGGGTGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LEVAFQVLQLCV*AHCSWGIWVQL
Trigger: CAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCAACCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CCA 72 bp GGGAAGCGCAAGGTCTGGGATCCTCGTCCGCCCGCTTaGTGGCCTAAACTCGCTTATCTCAACCCCTATCTG +
Preference number: 6 (lower is better)
Translates to: GKRKVWDPRPPA*WPKLAYLNPYL
Trigger: CAGATAGGGGTTGAGATAAGCGAGTTTAGGCCACCAAGCGGGCGGACGAGGATCCCAGACCTTGCGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS CAA 90 bp CTTGGAGGTTGCCTTTCAGGTCCTCCAGCTCTGCGTGTGGGCTCATaGCTCTTGGGGCATCTGGGTGCAGCTGAATGGTACTGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: LGGCLSGPPALRVGS*LLGHLGAAEWYCRK
Trigger: CTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCAACCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS TCA 72 bp CTGGGGGCATCTTGGAGACCAGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTGCCTTTCAGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: LGASWRPDPTET*SGTWRLPFRSS
Trigger: GGAGGACCTGAAAGGCAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS GCA 72 bp GGTTCCTCCAATAGGCCTTTCTCTCGGCAACCCCTCTaGTGTCTTCTCCCTTTCTCAGCGGGCACTTCCAGG +
Preference number: 6 (lower is better)
Translates to: GSSNRPFSRQPL*CLLPFSAGTSR
Trigger: CCTGGAAGTGCCCGCTGAGAAAGGGAGAAGACAGCAGAGGGGTTGCCGAGAGAAAGGCCTATTGGAGGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553275.1
ENST00000553397.5
ENST00000640254.2
CDS GCA 72 bp GCCTTTCAGGTCCTCCAGCTCTGCGTGTGGGCTCATTaGTCTTGGGGCATCTGGGTGCAGCTGAATGGTACT +
Preference number: 6 (lower is better)
Translates to: AFQVLQLCVWAH*SWGIWVQLNGT
Trigger: AGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CCA 72 bp CGACCTGAACGACAGTGTGCACAGCCCCGCTGGAACTaGCTTTTATGCATCTTGGTCCACTCCAAGGCCCTC +
Preference number: 6 (lower is better)
Translates to: RPERQCAQPRWN*LLCILVHSKAL
Trigger: GAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACACTGTCGTTCAGGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CCA 72 bp GCTGAAGGGGGTTCTGTGATCTGTTGGCCTAGGGTCTaGGTGGGAGGTTCATTCTCAGTGCCTACACCCCCT +
Preference number: 6 (lower is better)
Translates to: AEGGSVICWPRV*VGGSFSVPTPP
Trigger: AGGGGGTGTAGGCACTGAGAATGAACCTCCCACCCAGACCCTAGGCCAACAGATCACAGAACCCCCTTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CCA 72 bp GGCTCATTGCTCTTGGGGCATCTGGGTGCAGCTGAATaGTACTGCAGGAAGGCCCCTGACTTGGTAGTGCTG +
Preference number: 6 (lower is better)
Translates to: GSLLLGHLGAAE*YCRKAPDLVVL
Trigger: CAGCACTACCAAGTCAGGGGCCTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CAA 72 bp TGCTGGACAGTGTCTGAAAGTAGGGCACTAGCCAAGTaGCAGCAGAAGGCGTCGGAGCCGACCAGGAACTCC +
Preference number: 6 (lower is better)
Translates to: CWTVSESRALAK*QQKASEPTRNS
Trigger: GGAGTTCCTGGTCGGCTCCGACGCCTTCTGCTGCAACTTGGCTAGTGCCCTACTTTCAGACACTGTCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000537215.6
ENST00000543873.6
ENST00000553275.1
ENST00000553397.5
ENST00000553499.5
ENST00000553533.2
ENST00000554663.5
ENST00000555641.1
ENST00000555849.5
ENST00000556155.5
ENST00000556259.5
ENST00000557635.5
ENST00000640254.2
ENST00000651176.1
CDS CAA 72 bp TGTGCACAGCCCCGCTGGAACTGGCTTTTATGCATCTaGGTCCACTCCAAGGCCCTCCCGCCTGGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: CAQPRWNWLLCI*VHSKALPPGFF
Trigger: AAAGAAGCCAGGCGGGAGGGCCTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS CAA 72 bp TGCCTTTCAGGTCCTCCAGCTCTGCGTGTGGGCTCATaGCTCTTGGGGCATCTGGGTGCAGCTGAATGGTAC +
Preference number: 6 (lower is better)
Translates to: CLSGPPALRVGS*LLGHLGAAEWY
Trigger: GTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAATGAGCCCACACGCAGAGCTGGAGGACCTGAAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS TCA 72 bp CCTTTCTCTAGCCCAAGAGAGAAAGGTCCTCTGGAGTaGGTGGGCACCGCTTTCCTCTGCATCCCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: PFSSPREKGPLE*VGTAFLCIPLQ
Trigger: CTGCAAGGGGATGCAGAGGAAAGCGGTGCCCACTCACTCCAGAGGACCTTTCTCTCTTGGGCTAGAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543873.6
ENST00000554663.5
ENST00000555104.5
ENST00000557635.5
CDS TCA 72 bp CTGGGGGCATCTTGGAGACCAGACCCCACAGAGACATaGTCTGGGACTTGGAGGTTGCCTCCCAAACTCAGA +
Preference number: 6 (lower is better)
Translates to: LGASWRPDPTET*SGTWRLPPKLR
Trigger: TCTGAGTTTGGGAGGCAACCTCCAAGTCCCAGATCATGTCTCTGTGGGGTCTGGTCTCCAAGATGCCCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS GCA 72 bp TTGCTCTTGGGGCATCTGGGTGCAGCTGAATGGTACTaGAGGAAGGCCCCTGACTTGGTAGTGCTGGGTATG +
Preference number: 6 (lower is better)
Translates to: LLLGHLGAAEWY*RKAPDLVVLGM
Trigger: CATACCCAGCACTACCAAGTCAGGGGCCTTCCTGCAGTACCATTCAGCTGCACCCAGATGCCCCAAGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553499.5
CDS CCA 72 bp TCTCTAGCCCAAGAGAGAAAGGTCCTCTGGAGTGAGTaGGCACCGCTTTCCTCTGCATCCCCTTGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: SLAQERKVLWSE*APLSSASPCRV
Trigger: CACTCTGCAAGGGGATGCAGAGGAAAGCGGTGCCCACTCACTCCAGAGGACCTTTCTCTCTTGGGCTAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000543873.6
ENST00000554663.5
ENST00000555104.5
ENST00000557635.5
CDS CCA 72 bp GTCATAAGAAGGCACCATGGTAGGCATCTGGAGCTCTaGGGTAGGAAGTGGTTGGTCCCTGGAGGAGGGAAG +
Preference number: 6 (lower is better)
Translates to: VIRRHHGRHLEL*GRKWLVPGGGK
Trigger: CTTCCCTCCTCCAGGGACCAACCACTTCCTACCCCAGAGCTCCAGATGCCTACCATGGTGCCTTCTTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555222.5
CDS CAA 72 bp GCTCTCCAGCCAGTCACCCAGAAGATGCCGCAGGTGTaGGGGAAAGTCGACATAGAGCCGCTGCACTTTTTC +
Preference number: 6 (lower is better)
Translates to: ALQPVTQKMPQV*GKVDIEPLHFF
Trigger: GAAAAAGTGCAGCGGCTCTATGTCGACTTTCCCCAACACCTGCGGCATCTTCTGGGTGACTGGCTGGAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000300134.8
ENST00000454075.7
ENST00000543873.6
ENST00000553275.1
ENST00000553397.5
ENST00000553499.5
ENST00000553533.2
ENST00000554663.5
ENST00000554764.6
ENST00000555104.5
ENST00000555641.1
ENST00000555849.5
ENST00000556155.5
ENST00000556259.5
ENST00000557635.5
ENST00000640254.2
ENST00000651176.1
CDS GCA 72 bp AGAGTGTGGTGGGTACACACCATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCAGGGGCCATTCCAAGG +
Preference number: 6 (lower is better)
Translates to: RVWWVHTISGPS*MLMEESGAIPR
Trigger: CCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTGTACCCACCACACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555318.1
CDS GCA 72 bp CTTCCGAAGTGTTTGCTGCTATCCACTACCATTCCCTaGCCTGTGCACTCCATGCTCTTGCTCACCCCCACT +
Preference number: 6 (lower is better)
Translates to: LPKCLLLSTTIP*PVHSMLLLTPT
Trigger: AGTGGGGGTGAGCAAGAGCATGGAGTGCACAGGGCAGGGAATGGTAGTGGATAGCAGCAAACACTTCGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS CCA 72 bp ACTTGGAGGTTGCCTCTCCCAGGCCTCTCAGAGGGATaGAAAATGGAGAGGTCCCTTCTCTGGACGTTTCTG +
Preference number: 6 (lower is better)
Translates to: TWRLPLPGLSEG*KMERSLLWTFL
Trigger: CAGAAACGTCCAGAGAAGGGACCTCTCCATTTTCCATCCCTCTGAGAGGCCTGGGAGAGGCAACCTCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553275.1
ENST00000557635.5
CDS CCA 72 bp AGGATGCGACCTGAACGACAGTGTGCACAGCCCCGCTaGAACTGGCTTTTATGCATCTTGGTCCACTCCAAG +
Preference number: 6 (lower is better)
Translates to: RMRPERQCAQPR*NWLLCILVHSK
Trigger: CTTGGAGTGGACCAAGATGCATAAAAGCCAGTTCCAGCGGGGCTGTGCACACTGTCGTTCAGGTCGCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS GCA 72 bp TGTGGTGGGTACACACCATATCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGGCCATTCCAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: CGGYTPYLGQAA*SWRNQGPFQGH
Trigger: ATGACCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTGTACCCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555318.1
CDS GCA 72 bp GTCTTTCCAGCTCCTTACACCATATCTGGGCCAAGCTaGATGCTCATGGAGGAATCAGGGGCCATTCCAAGG +
Preference number: 6 (lower is better)
Translates to: VFPAPYTISGPS*MLMEESGAIPR
Trigger: CCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTAAGGAGCTGGAAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554202.1
CDS GCA 72 bp CTTGGTGGCCTAAACTCGCTTATCTCAACCCCTATCTaGCCGAGTCCTCTGATTGTGGGACCACAGGATCGA +
Preference number: 6 (lower is better)
Translates to: LGGLNSLISTPI*PSPLIVGPQDR
Trigger: TCGATCCTGTGGTCCCACAATCAGAGGACTCGGGCAGATAGGGGTTGAGATAAGCGAGTTTAGGCCACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555849.5
CDS GCA 72 bp GCCCTGGTCTATAGGAAGTGCTTCCGAAGTGTTTGCTaGTATCCACTACCATTCCCTGCCCTGTGCACTCCA +
Preference number: 6 (lower is better)
Translates to: ALVYRKCFRSVC*YPLPFPALCTP
Trigger: TGGAGTGCACAGGGCAGGGAATGGTAGTGGATAGCAGCAAACACTTCGGAAGCACTTCCTATAGACCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS GCA 72 bp GATGGAAAATGGAGAGGTCCCTTCTCTGGACGTTTCTaGTCCAAGACCTTCATGCCCCTCTTTCCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: DGKWRGPFSGRF*SKTFMPLFPPV
Trigger: CACTGGAGGAAAGAGGGGCATGAAGGTCTTGGAGCAGAAACGTCCAGAGAAGGGACCTCTCCATTTTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553275.1
ENST00000557635.5
CDS GCA 72 bp TTCCAGCTCCTTACACCATATCTGGGCCAAGCTGCATaGTCATGGAGGAATCAGGGGCCATTCCAAGGTCAT +
Preference number: 6 (lower is better)
Translates to: FQLLTPYLGQAA*SWRNQGPFQGH
Trigger: ATGACCTTGGAATGGCCCCTGATTCCTCCATGAGCATGCAGCTTGGCCCAGATATGGTGTAAGGAGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554202.1
CDS GCA 72 bp AGTGCCCTGGTCTATAGGAAGTGCTTCCGAAGTGTTTaGTGCTATCCACTACCATTCCCTGCCCTGTGCACT +
Preference number: 6 (lower is better)
Translates to: SALVYRKCFRSV*CYPLPFPALCT
Trigger: AGTGCACAGGGCAGGGAATGGTAGTGGATAGCAGCAAACACTTCGGAAGCACTTCCTATAGACCAGGGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS CCA 72 bp CCACACTCACCTTTCCACGGTCATCTTGATGGTAGCTaGGACATAACCCCTGCCATCCTTACCCATCTGTTC +
Preference number: 6 (lower is better)
Translates to: PHSPFHGHLDGS*DITPAILTHLF
Trigger: GAACAGATGGGTAAGGATGGCAGGGGTTATGTCCCAGCTACCATCAAGATGACCGTGGAAAGGTGAGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555222.5
CDS TCA 72 bp CTAGGCAAATGCAGAGTGGTGCAAAGTCAGGACCACTaGGTGAGGAAACAAGCTCCAGCTCCTTATCCTGAC +
Preference number: 6 (lower is better)
Translates to: LGKCRVVQSQDH*VRKQAPAPYPD
Trigger: GTCAGGATAAGGAGCTGGAGCTTGTTTCCTCACTCAGTGGTCCTGACTTTGCACCACTCTGCATTTGCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557563.5
CDS CCA 72 bp ATCTTGTTGAACTGCGACCAGGACACAGAACGGTGCTaGAAGGCCTCCATACTGAGGCTGTTGTCATTGAAG +
Preference number: 6 (lower is better)
Translates to: ILLNCDQDTERC*KASILRLLSLK
Trigger: CTTCAATGACAACAGCCTCAGTATGGAGGCCTTCCAGCACCGTTCTGTGTCCTGGTCGCAGTTCAACAAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553533.2
CDS CAA 90 bp CCGACGGCTCTTGCACCCAGGACAACTGCCACCACTTACAGTGCTTaGTGGCAAATTGGAAAGTGTTCCCACCCAATAAACCAAATGGAA +
Preference number: 6 (lower is better)
Translates to: PTALAPRTTATTYSA*WQIGKCSHPINQME
Trigger: TTCCATTTGGTTTATTGGGTGGGAACACTTTCCAATTTGCCACAAAGCACTGTAAGTGGTGGCAGTTGTCCTGGGTGCAAGAGCCGTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS TCA 72 bp CCACTGAGTGAGGAAACAAGCTCCAGCTCCTTATCCTaGCTTAGTCATGGCCTGGGCAAGCTATTTCTATGC +
Preference number: 6 (lower is better)
Translates to: PLSEETSSSSLS*LSHGLGKLFLC
Trigger: GCATAGAAATAGCTTGCCCAGGCCATGACTAAGTCAGGATAAGGAGCTGGAGCTTGTTTCCTCACTCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557563.5
CDS CCA 72 bp CAAGCTCCAGCTCCTTATCCTGACTTAGTCATGGCCTaGGCAAGCTATTTCTATGCTCTGAGCTCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: QAPAPYPDLVMA*ASYFYALSSVF
Trigger: GAAGACTGAGCTCAGAGCATAGAAATAGCTTGCCCAGGCCATGACTAAGTCAGGATAAGGAGCTGGAGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557563.5
CDS CCA 72 bp GTTCTGAAGCTCAATCAGGGCCTCACCGTAGAGAAGTaGTTATTAGTCATCGCTATGGAACCAGACCTCCAG +
Preference number: 6 (lower is better)
Translates to: VLKLNQGLTVEK*LLVIAMEPDLQ
Trigger: CTGGAGGTCTGGTTCCATAGCGATGACTAATAACCACTTCTCTACGGTGAGGCCCTGATTGAGCTTCAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS CAA 72 bp CTTGCACCCAGGACAACTGCCACCACTTACAGTGCTTaGTGGCAAATTGGAAAGTGTTCCCACCCAATAAAC +
Preference number: 6 (lower is better)
Translates to: LAPRTTATTYSA*WQIGKCSHPIN
Trigger: GTTTATTGGGTGGGAACACTTTCCAATTTGCCACAAAGCACTGTAAGTGGTGGCAGTTGTCCTGGGTGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555641.1
CDS TCA 72 bp GAGGCTGATAATACTGCCTACCTCATAATGTTATTGTaGAAACCAGACGTGTGTGTGCTGGCACGCATGTGC +
Preference number: 6 (lower is better)
Translates to: EADNTAYLIMLL*KPDVCVLARMC
Trigger: GCACATGCGTGCCAGCACACACACGTCTGGTTTTCACAATAACATTATGAGGTAGGCAGTATTATCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557781.5
CDS CCA 72 bp GACAACTGCCACCACTTACAGTGCTTTGTGGCAAATTaGAAAGTGTTCCCACCCAATAAACCAAATGGAAAA +
Preference number: 6 (lower is better)
Translates to: DNCHHLQCFVAN*KVFPPNKPNGK
Trigger: TTTTCCATTTGGTTTATTGGGTGGGAACACTTTCCAATTTGCCACAAAGCACTGTAAGTGGTGGCAGTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555641.1