RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for STARD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000130052

Ensembl transcript IDs: ENST00000252336.10, ENST00000374597.3, ENST00000374599.7, ENST00000374599.8, ENST00000488088.1, ENST00000523864.5

Found 1074 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCGGAGCCAGGACTGCTGGCTGGACTTCAGCCTGGGCCCAGGCTaGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTGAGAGCCTC +
Preference number: 1 (lower is better)
Translates to: SRSQDCWLDFSLGPG*GLSMGRNLHLAESL
Trigger: GAGGCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGCTCCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp CTCTTATTCCCCCTCGCTCCCTTGGTGCCCAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCAAGGCTCACAGCTTTGTCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: LLFPLAPLVPRGPGW*HPGTSPRLTALSQG
Trigger: GCCCTGAGACAAAGCTGTGAGCCTTGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAATAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATaGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCTCACAGCCC +
Preference number: 1 (lower is better)
Translates to: GSAGYSSGKLSYVLA*LPVEPQEPRRPSQP
Trigger: GGGCTGTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp CCCATCCGGTGCCTTCCTGCAAGCCAGCTCCGTGTGCTGGGGCCCTaGCACGCTCATCCAGCCCTTGAAGCGCTCAGCAGCATCACGCAG +
Preference number: 1 (lower is better)
Translates to: PIRCLPASQLRVLGP*HAHPALEALSSITQ
Trigger: CTGCGTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTTGCAGGAAGGCACCGGATGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACTaGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCAC +
Preference number: 1 (lower is better)
Translates to: ARTPDSGTGCSGSRD*ETSRQPPRGRSERH
Trigger: GTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp TGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAGTCT +
Preference number: 1 (lower is better)
Translates to: CRPLCPCRRGAVEAS*QVAASQAGGWWQQS
Trigger: AGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp AGGCCACAGGCCAGGCCTCCCAGGCCTTCCGAGTATTGGCACCACTaGCACCGGCTGAGGTGGCGGCCCAGTTCTTGGCCCTGTAAAATC +
Preference number: 1 (lower is better)
Translates to: RPQARPPRPSEYWHH*HRLRWRPSSWPCKI
Trigger: GATTTTACAGGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTGGGAGGCCTGGCCTGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 90 bp TGGCAGAGAGGTGGCACTAAGCTCGGTGAGGACGCTCTCACAGCTTaGGGTCGCTGGCAGGCCAGGGCTCGGTGGGGCCAACAGATCAGA +
Preference number: 1 (lower is better)
Translates to: WQRGGTKLGEDALTA*GRWQARARWGQQIR
Trigger: TCTGATCTGTTGGCCCCACCGAGCCCTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTCCTCACCGAGCTTAGTGCCACCTCTCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp CCATTACAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTaGTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCT +
Preference number: 1 (lower is better)
Translates to: PLQAQLGTAQASCHT*WHGCPLSHRSPGAP
Trigger: AGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp TGGGACCAGCCCAAGGCTCACAGCTTTGTCTCAGGGCCCGCTGCCTaGAGGGTGGGGAAGGAGTCCCGGATCTTTGCCACTTCCATGGCA +
Preference number: 1 (lower is better)
Translates to: WDQPKAHSFVSGPAA*RVGKESRIFATSMA
Trigger: TGCCATGGAAGTGGCAAAGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGGGCTGGTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp ACCCTGGGACCAGCCCAAGGCTCACAGCTTTGTCTCAGGGCCCGCTaGCTGCAGGGTGGGGAAGGAGTCCCGGATCTTTGCCACTTCCAT +
Preference number: 1 (lower is better)
Translates to: TLGPAQGSQLCLRAR*LQGGEGVPDLCHFH
Trigger: ATGGAAGTGGCAAAGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGGGCTGGTCCCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp CTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACT +
Preference number: 1 (lower is better)
Translates to: LFAPAGGELWRLHAK*RPHKQVAGGSSLAT
Trigger: AGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp TTACAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTaGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCTCAC +
Preference number: 1 (lower is better)
Translates to: LQAQLGTAQASCHTC*HGCPLSHRSPGAPH
Trigger: GTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp TGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTACTaGGATGTGAGCATGAGGGCTCGCACACCCGACTCTGGCACAGGT +
Preference number: 1 (lower is better)
Translates to: CVSRERPKPQGSMRY*DVSMRARTPDSGTG
Trigger: ACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCTCACATCCCAGTACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp TGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTaGAGGCGGGGAGCTGTGGAGGCTTCATGCCAAGTGGCGGCCTCA +
Preference number: 1 (lower is better)
Translates to: WQRAGITHCCRPLCP*RRGAVEASCQVAAS
Trigger: TGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp AGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCT +
Preference number: 1 (lower is better)
Translates to: RRLALSVWQRAGITH*CRPLCPCRRGAVEA
Trigger: AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp TCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: SHIAVDLFAPAGGEL*RLHAKWRPHKQVAG
Trigger: ACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp CCTCCCAGGCCTTCCGAGTATTGGCACCACTGCCACCGGCTGAGGTaGCGGCCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGC +
Preference number: 1 (lower is better)
Translates to: PPRPSEYWHHCHRLR*RPSSWPCKIQLRGS
Trigger: GCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 90 bp AAGCCAGCTCCGTGTGCTGGGGCCCTGGCACGCTCATCCAGCCCTTaGAGCGCTCAGCAGCATCACGCAGCAGGTCCTGGATATTCTCTT +
Preference number: 1 (lower is better)
Translates to: KPAPCAGALARSSSP*SAQQHHAAGPGYSL
Trigger: AAGAGAATATCCAGGACCTGCTGCGTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp TCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATGCCAAGTGGCG +
Preference number: 1 (lower is better)
Translates to: SVWQRAGITHCCRPL*PCRRGAVEASCQVA
Trigger: CGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTaGTGCCAACCACTGATCCTTGGGGAGGAGCTGGTAGATCTGGAG +
Preference number: 1 (lower is better)
Translates to: HLSVLIGEQQGGGLC*CQPLILGEELVDLE
Trigger: CTCCAGATCTACCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GCCTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTaGCTGAGAGCCTCAGCTTGGCATTTGACCTCAACTGTGGCTATT +
Preference number: 1 (lower is better)
Translates to: AWAQAGDSPWAGTSI*LRASAWHLTSTVAI
Trigger: AATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp CTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTaGCAACCACTGATCCTTGGGGAGGAGCTGGTAGATCTGGAGGAA +
Preference number: 1 (lower is better)
Translates to: LSVLIGEQQGGGLCC*QPLILGEELVDLEE
Trigger: TTCCTCCAGATCTACCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GAGTATTGGCACCACTGCCACCGGCTGAGGTGGCGGCCCAGTTCTTaGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGA +
Preference number: 1 (lower is better)
Translates to: EYWHHCHRLRWRPSS*PCKIQLRGSHDNCG
Trigger: TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp CATGAGGTACTGGGATGTGAGCATGAGGGCTCGCACACCCGACTCTaGCACAGGTTGTTCCGGATCCAGGGACTGGGAGACAAGCAGGCA +
Preference number: 1 (lower is better)
Translates to: HEVLGCEHEGSHTRL*HRLFRIQGLGDKQA
Trigger: TGCCTGCTTGTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCTCACATCCCAGTACCTCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 90 bp GTGGGGCACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTaGGCCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTT +
Preference number: 1 (lower is better)
Translates to: VGHSVLLHERGKPQQ*ALVQEVDLACKLPV
Trigger: AACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGTGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp AACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGAGGTTGATCTaGCCTGCAAACTGCCGGTTGATCTCCAGCGACTCTGAGTTGAGG +
Preference number: 1 (lower is better)
Translates to: NAVSRSSEPLCRRLI*PANCRLISSDSELR
Trigger: CCTCAACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp GTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTaGAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGC +
Preference number: 1 (lower is better)
Translates to: VYFSMNAVSRSSEPL*RRLIWPANCRLISS
Trigger: GCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp AAGTTTCTTGCAGTCACTGATCATGTGCGACAGGCCCTGGGTGGCTaGCATGTTGTCACTCAGGTCCCTAGGGCCTGGCCTGCCAATGAG +
Preference number: 1 (lower is better)
Translates to: KFLAVTDHVRQALGG*HVVTQVPRAWPANE
Trigger: CTCATTGGCAGGCCAGGCCCTAGGGACCTGAGTGACAACATGGCAGCCACCCAGGGCCTGTCGCACATGATCAGTGACTGCAAGAAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GGGAGCTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTT +
Preference number: 1 (lower is better)
Translates to: GSCGGFMPSGGLTSR*LVAAVLLLMRFSSL
Trigger: AAGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp CAGGTTTGGCTTAAGCTCCAGCTGGCTAAGATAGGCCCTTCCATCTaGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTA +
Preference number: 1 (lower is better)
Translates to: QVWLKLQLAKIGPSI*LAQGPGLCLRKGLL
Trigger: TAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAAGGGCCTATCTTAGCCAGCTGGAGCTTAAGCCAAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR TCA 90 bp GAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACTCTaGGTTGAGGCTGGGACGATGGGAGTTCTGGAAGCTATGCCAACG +
Preference number: 1 (lower is better)
Translates to: EVDLACKLPVDLQRL*VEAGTMGVLEAMPT
Trigger: CGTTGGCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 90 bp CAGGCGAGGTCTCATTCATTTGACGCAGGTTCTGGATCCTGGACTTaGCCCCAGACTTGCGGAAGATGCCTACTTGGTCCAGGCACTGGC +
Preference number: 1 (lower is better)
Translates to: QARSHSFDAGSGSWT*PQTCGRCLLGPGTG
Trigger: GCCAGTGCCTGGACCAAGTAGGCATCTTCCGCAAGTCTGGGGTCAAGTCCAGGATCCAGAACCTGCGTCAAATGAATGAGACCTCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 90 bp GCTGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTTaGGGAAGCTACGGTTACGATGGCGCTTCTTGGCTTTGTCCTGGG +
Preference number: 1 (lower is better)
Translates to: AGCHSFPSASEIQGA*GSYGYDGASWLCPG
Trigger: CCCAGGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp TTGGAGACCTTCTCTGAGGTGGCTGGACTATGCTTGGGCTCTGCTTaGTGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGC +
Preference number: 1 (lower is better)
Translates to: LETFSEVAGLCLGSA*WLPLFSFRLRDSRC
Trigger: GCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GACATAGACCCTTGTCTCTTAACCACACTCTGCTTTTGCTTGGCCTaGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGG +
Preference number: 1 (lower is better)
Translates to: DIDPCLLTTLCFCLA*AVSVRGQRLHRTPW
Trigger: CCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAGACAAGGGTCTATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp AAGATGAGGCTTTGGAGACCTTCTCTGAGGTGGCTGGACTATGCTTaGGCTCTGCTTGCTGGCTGCCACTCTTTTCCTTCCGCCTCAGAG +
Preference number: 1 (lower is better)
Translates to: KMRLWRPSLRWLDYA*ALLAGCHSFPSASE
Trigger: CTCTGAGGCGGAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAAGCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp CTCCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTaGCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCG +
Preference number: 1 (lower is better)
Translates to: LLSNLKSILAANKTA*PLSLAESWDHTLLS
Trigger: CGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp GCCAACAGATCAGAGGACCCCATAGGAGACCAGCACTTACTTTCCTaGTGGAAGGCCCAGTGGCTACTGATGGTACACTGCTCTTCCTCT +
Preference number: 1 (lower is better)
Translates to: ANRSEDPIGDQHLLS*WKAQWLLMVHCSSS
Trigger: AGAGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCTGGTCTCCTATGGGGTCCTCTGATCTGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp GCTTGCTGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTaGTTGAGGAAGCTACGGTTACGATGGCGCTTCTTGGCTTTGTCC +
Preference number: 1 (lower is better)
Translates to: ACWLPLFSFRLRDSR*LRKLRLRWRFLALS
Trigger: GGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCAGCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp TCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCC +
Preference number: 1 (lower is better)
Translates to: SKASLQQTRRLALSV*QRAGITHCCRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp GGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACCCAAGTCAGGGAATACTGGTTTCAC +
Preference number: 1 (lower is better)
Translates to: GSVSAWPKATQDPMG*SIKCETQVREYWFH
Trigger: GTGAAACCAGTATTCCCTGACTTGGGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp ATCCAGCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTaGAGACCTTCTCTGAGGTGGCTGGACTATGCTTGGGCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: IQLRGSHDNCGKMRL*RPSLRWLDYAWALL
Trigger: AAGCAGAGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp ATCATCTTCATCTTCAGCCTCAGCCCCAACCATTACAGGCTCAGCTaGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTGCC +
Preference number: 1 (lower is better)
Translates to: IIFIFSLSPNHYRLS*VQLRQVVIRAGMAA
Trigger: GGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATGGTTGGGGCTGAGGCTGAAGATGAAGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GACTCTCCATGGGCCGGAACCTCCATCTGGCTGAGAGCCTCAGCTTaGCATTTGACCTCAACTGTGGCTATTTCTACTGATGAAGTGGCC +
Preference number: 1 (lower is better)
Translates to: DSPWAGTSIWLRASA*HLTSTVAISTDEVA
Trigger: GGCCACTTCATCAGTAGAAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 90 bp GTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTaGAACCCAAGTCAGGGAATACTGGTTTCACTGGCATCTCGAGAC +
Preference number: 1 (lower is better)
Translates to: VAKGYTGPHGVVDKV*NPSQGILVSLASRD
Trigger: GTCTCGAGATGCCAGTGAAACCAGTATTCCCTGACTTGGGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp AGGGATGATGACATAGACCCTTGTCTCTTAACCACACTCTGCTTTTaGTTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGG +
Preference number: 1 (lower is better)
Translates to: RDDDIDPCLLTTLCF*LAWAVSVRGQRLHR
Trigger: CCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp AGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTaGGGAAAGATGAGGCTTTGGAGACCTTCTCTGAGGTGGCTGGAC +
Preference number: 1 (lower is better)
Translates to: SSWPCKIQLRGSHDN*GKMRLWRPSLRWLD
Trigger: GTCCAGCCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 90 bp GACCCCATAGGAGACCAGCACTTACTTTCCTGCTGGAAGGCCCAGTaGCTACTGATGGTACACTGCTCTTCCTCTTCTGAGTCTTCATTC +
Preference number: 1 (lower is better)
Translates to: DPIGDQHLLSCWKAQ*LLMVHCSSSSESSF
Trigger: GAATGAAGACTCAGAAGAGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCTGGTCTCCTATGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 90 bp CGAGACTTGAGAAAGGAAGGTACTCCACTCTCACATCCCTATCTATaGCAAATCGTCATGTCACATATTAGGGGCCCGTCAGTGCCCACT +
Preference number: 1 (lower is better)
Translates to: RDLRKEGTPLSHPYL*QIVMSHIRGPSVPT
Trigger: AGTGGGCACTGACGGGCCCCTAATATGTGACATGACGATTTGGCATAGATAGGGATGTGAGAGTGGAGTACCTTCCTTTCTCAAGTCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 90 bp GTGGCCTTTGAATGGCATTTGAATTTCCATGTGAGCAAAGATGGCTaGCCAGTGGGACAGAACAGGTTTGGCTTAAGCTCCAGCTGGCTA +
Preference number: 1 (lower is better)
Translates to: VAFEWHLNFHVSKDG*PVGQNRFGLSSSWL
Trigger: TAGCCAGCTGGAGCTTAAGCCAAACCTGTTCTGTCCCACTGGCCAGCCATCTTTGCTCACATGGAAATTCAAATGCCATTCAAAGGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 90 bp CCTATCTATGCCAAATCGTCATGTCACATATTAGGGGCCCGTCAGTaGCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTAC +
Preference number: 1 (lower is better)
Translates to: PIYAKSSCHILGARQ*PLLTQPHKIQHRIY
Trigger: GTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAATATGTGACATGACGATTTGGCATAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGCTGGGCCGGGAGGGCTaGGCTCAGCTGCGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGLGREG*AQLRCR
Trigger: CCTACAGCGCAGCTGAGCTCAGCCCTCCCGGCCCAG...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTCCTGCAGCTTGGGCCTaGCGCAGCTCAGCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPPAAWA*RSSARA
Trigger: AGCCCTGGCTGAGCTGCGTCAGGCCCAAGCTGCAGG...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 2 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGGCCAGGACTGCTGGCTaGACTTCAGCCTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: LIPEGPLPENTMQHHSWGARTAG*TSAWAQ
Trigger: CTGGGCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGC...CCCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGRGPGW*HPGTSP
Trigger: TGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCGTGGTGACTGGGGCTaGCCTGCGCTCCACCCCTGT +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSRGDWG*PALHPC
Trigger: ACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGATAGGCCCTTCCATCTaGCTGGCCCAGGGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGIGPSI*LAQGPG
Trigger: ACCTGGCCCCTGGGCCAGCCAGATGGAAGGGCCTAT...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGCTGGGGGCACGGCCTaGCAAGGGCAAGTCTGCTGG +
Preference number: 2 (lower is better)
Translates to: DWETSRQPPRGRSERHIRAGGTA*QGQVCW
Trigger: CCAGCAGACTTGCCCTTGCCAGGCCGTGCCCCCAGC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGTGCGCTGCACGTGGATaGGGGGTGGCACCCCAAATA +
Preference number: 2 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGCAARG*GVAPQI
Trigger: TATTTGGGGTGCCACCCCTCATCCACGTGCAGCGCA...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPRGLP*SYSPSL
Trigger: GAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTCAGCCTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: FSLGPGWGLSMGRNLHLACCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...AGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAGGCTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGGTCCAGGCACTGGCTaGGCAAGTAGCGCATGGCTT +
Preference number: 2 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGGPGTG*ASSAWL
Trigger: AAGCCATGCGCTACTTGCGCAGCCAGTGCCTGGACC...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTACATAGCCGCAGGGGGTaGCCATCCGGTGCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: PADVCEPRAAQAARLHEVHSRRG*PSGAFL
Trigger: CAGGAAGGCACCGGATGGGCACCCCCTGCGGCTATG...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPAGGEL*RLHAKW
Trigger: CCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGC...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCACAGCTCGTGGTGACTaGGGCTGCCCTGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSTARGD*GCPALH
Trigger: GTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGT...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMRGPGW*HPGTSP
Trigger: TGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCT...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTAGCTCAGGCTTACCCCTaGAGCTTGGGCCTGACGCAG +
Preference number: 2 (lower is better)
Translates to: PADVCEPRAAQAARLHEVAQAYP*SLGLTQ
Trigger: CTGCGTCAGGCCCAAGCTGCAGGGGTAAGCCTGAGC...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACAGGCCAGGGCTCGGTaGGGCCAACAGATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: ETARGDWGCPALHPCAHSQARAR*GQQIRG
Trigger: TCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGCCAGGTCTGGGTACATaGCCCGAGACCACAGCTCTA +
Preference number: 2 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGPGLGT*PETTAL
Trigger: TAGAGCTGTGGTCTCGGGCCATGTACCCAGACCTGG...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp CTGGGATGTGAGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTaGTTCCGGATCCAGGGACTGGGAGACAAGCAGGCAACCCCCACG +
Preference number: 2 (lower is better)
Translates to: LGCEHEGSHTRLWHR*FRIQGLGDKQATPT
Trigger: CGTGGGGGTTGCCTGCTTGTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCTCACATCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTC +
Preference number: 2 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAPRGLP*SYSPSL
Trigger: GAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: MKQLVVTGAALRSTPVPICCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGCCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCAGGCCCTGGGTGGCTaGCATGTTGTCACTCAGGTC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSQALGG*HVVTQV
Trigger: GACCTGAGTGACAACATGGCAGCCACCCAGGGCCTG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGCAAGCAGGTGGCTGGTaGCAGCAGTCTTGCTACTCA +
Preference number: 2 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGQAGGW*QQSCYS
Trigger: TGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTG...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: ETARGDWGCPALHPCAHSGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTCAGCCTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: FSLGPGWGLSMGRNLHLARLHAK*RPHKQV
Trigger: CACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCT...AGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAGGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACTTCAGAGCCAGCGTTaGCCCCAAAGGCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: ETARGDWGCPALHPCAHSLQSQR*PQRQDQ
Trigger: CTGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCGGAAGATGCCTACTTaGTCCAGGCACTGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSRKMPT*SRHWLR
Trigger: GCGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTATGTGCGACAGGCCCTaGGTGGCTGCCATGTTGTCA +
Preference number: 2 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPMCDRP*VAAMLS
Trigger: TGACAACATGGCAGCCACCCAGGGCCTGTCGCACAT...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp AAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: KTACPLSLAESWDHT*LSTSLPLQAGSCGG
Trigger: GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAGCCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CAA 90 bp CAAGCCAGCTCCGTGTGCTGGGGCCCTGGCACGCTCATCCAGCCCTaGAAGCGCTCAGCAGCATCACGCAGCAGGTCCTGGATATTCTCT +
Preference number: 2 (lower is better)
Translates to: QASSVCWGPGTLIQP*KRSAASRSRSWIFS
Trigger: AGAGAATATCCAGGACCTGCTGCGTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGATCTCCAGCGACTCTaGGTTGAGGCTGGGACGATG +
Preference number: 2 (lower is better)
Translates to: DWETSRQPPRGRSERHIRDLQRL*VEAGTM
Trigger: CATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHRGPGW*HPGTSP
Trigger: TGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCT...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 2 (lower is better)
Translates to: HKQVAGGSSLATHAILFSPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTCAGCCTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACA +
Preference number: 2 (lower is better)
Translates to: FSLGPGWGLSMGRNLHLALALSV*QRAGIT
Trigger: TGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAG...AGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAATTCTTGGCTTTGTCCTaGGGACCCTCCTGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQFLALS*GPSWPW
Trigger: CCAGGGCCAGGAGGGTCCCCAGGACAAAGCCAAGAA...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTAGGCCTTCCGAGTATTaGCACCACTGCCACCGGCTG +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGRPSEY*HHCHRL
Trigger: CAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTATCATACGTGCTGGCATaGCTGCCCGTTGAGCCACAG +
Preference number: 2 (lower is better)
Translates to: PADVCEPRAAQAARLHEVSYVLA*LPVEPQ
Trigger: CTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGA...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCCAGGCCCCAGGTCTaGGTACATGGCCCGAGACCA +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEASRPQV*VHGPRP
Trigger: TGGTCTCGGGCCATGTACCCAGACCTGGGGCCTGGA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTCCTGCTCACTGTCCTaGGCTGGGGCCGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRESCSLS*AGAGAG
Trigger: CCCGGCCCCGGCCCCAGCCCAGGACAGTGAGCAGGA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp CTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATGCCAAGTGGC +
Preference number: 2 (lower is better)
Translates to: LSLAESWDHTLLSTS*PLQAGSCGGFMPSG
Trigger: GCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CAA 90 bp TTGCAGTCACTGATCATGTGCGACAGGCCCTGGGTGGCTGCCATGTaGTCACTCAGGTCCCTAGGGCCTGGCCTGCCAATGAGGCTGCGT +
Preference number: 2 (lower is better)
Translates to: LQSLIMCDRPWVAAM*SLRSLGPGLPMRLR
Trigger: ACGCAGCCTCATTGGCAGGCCAGGCCCTAGGGACCTGAGTGACAACATGGCAGCCACCCAGGGCCTGTCGCACATGATCAGTGACTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCTCTCCATTCTCATCTaGAGTGCCCCTCAGGCCTTC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSLSILI*SAPQAF
Trigger: GAAGGCCTGAGGGGCACTTCAGATGAGAATGGAGAG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCCCTGTAAAATCCAGCTaGGAGGAAGCCACGACAACT +
Preference number: 2 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPPVKSS*EEATTT
Trigger: AGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGG...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCATGAACTTGGGCATTaGCCAGACCCAGCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSHELGH*PDPALL
Trigger: AAGCAGGGCTGGGTCTGGTCAATGCCCAAGTTCATG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp TGCCATGCTGTCGGTGACATAGTGGTACAGCTCCACACCCGGCATCAGGGCTTCGCTGCTGCCAACCACTaGTCCTTGGGGAGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: CHAVGDIVVQLHTRHQGFAAANH*SLGRSW
Trigger: CCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGC...GAAGCCCTGATGCCGGGTGTGGAGCTGTACCACTATGTCACCGACAGCATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTGTTTCTTGCAGTCACTaGTCATGTGCGACAGGCCCT +
Preference number: 2 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPVSCSH*SCATGP
Trigger: AGGGCCTGTCGCACATGATCAGTGACTGCAAGAAAC...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCA +
Preference number: 2 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGRGPGW*HPGTSP
Trigger: TGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGCCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTC +
Preference number: 2 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRPRGLP*SYSPSL
Trigger: GAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGG...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAA +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGAVEAS*QVAASQ
Trigger: TTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp AGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAA +
Preference number: 2 (lower is better)
Translates to: SMRARTPDSGTGCSGSRDAVEAS*QVAASQ
Trigger: TTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGC...GTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: ETARGDWGCPALHPCAHSAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCGTGGTGACTGGGGCTaGCCTGCGCTCCACCCCTGT +
Preference number: 2 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHRGDWG*PALHPC
Trigger: ACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTTAGGGGCCCGTCAGTaGCCACTCTTAACTCAGCCT +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSLGARQ*PLLTQP
Trigger: AGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTTTGAGGGATCCTGCTaGACCTGGCTCCCTACCTCT +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSFEGSC*TWLPTS
Trigger: AGAGGTAGGGAGCCAGGTGCAGCAGGATCCCTCAAA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTCACCGCCTACCTGGCTaGCAGTCTGCCAGGCGGTGT +
Preference number: 2 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPHRLPG*QSARRC
Trigger: ACACCGCCTGGCAGACTGGCAGCCAGGTAGGCGGTG...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTCCCCCTCGCTCCCTTaGTGCCCAGGGGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRESPSLP*CPGGLG
Trigger: ACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: ETARGDWGCPALHPCAHSSQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGCCCTTCCATCTGGCTaGCCCAGGGGCCAGGTCTCT +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETALPSG*PRGQVS
Trigger: AGAGACCTGGCCCCTGGGCCAGCCAGATGGAAGGGC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGCCGGTCACTCGAGCTaGGGGCACGGCCTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGAGHSS*GHGLAR
Trigger: CCTTGCCAGGCCGTGCCCCCAGCTCGAGTGACCGGC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGCGAGGGAATGTGCCTaGTTTGTGGTCCCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGARECA*FVVPRN
Trigger: GTTCCTGGGGACCACAAACCAGGCACATTCCCTCGC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGCCCCACCGCCTACCTaGCTGCCAGTCTGCCAGGCG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREAPPPT*LPVCQA
Trigger: CGCCTGGCAGACTGGCAGCCAGGTAGGCGGTGGGGC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp TCAGCCCCAACCATTACAGGCTCAGCTGGGTACAGCTCAGGCAAGTaGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: SAPTITGSAGYSSGK*SYVLAWLPVEPQEP
Trigger: GGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATGGTTGGGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGGCCAGGTCTCTGCTTaGGAAAGGGGCTGTTATGTT +
Preference number: 2 (lower is better)
Translates to: DWETSRQPPRGRSERHIRGQVSA*ERGCYV
Trigger: AACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCCTGGGCAGTGTCAGTaGGTGGCCAAAGGCTACACA +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAPGQCQ*VAKGYT
Trigger: TGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTAACCACACTCTGCTTTTaGTTGGCCTGGGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: PADVCEPRAAQAARLHEVTTLCF*LAWAVS
Trigger: TGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGT...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTTGCTTGGGCTCTGCTTaGTGGCTGCCACTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: MKQLVVTGAALRSTPVPICLGSA*WLPLFS
Trigger: GGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCA...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTTGGTCCCCAGGAACGTaGACCAGGCAATCACCCCGG +
Preference number: 2 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPWSPGT*TRQSPR
Trigger: CCGGGGTGATTGCCTGGTGCACGTTCCTGGGGACCA...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTACCTGGCTGCCAGTCTaGCAGGCGGTGTCCATCCTC +
Preference number: 2 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPTWLPV*QAVSIL
Trigger: GAGGATGGACACCGCCTGGCAGACTGGCAGCCAGGT...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTACGTGCTGGCATGGCTaGCCGTTGAGCCACAGGAGC +
Preference number: 2 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPTCWHG*PLSHRS
Trigger: GCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGT...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp TGCCATGCTGTCGGTGACATAGTGGTACAGCTCCACACCCGGCATCAGGGCTTCGACCAGACCCAGCCCTaGTTGTGGGGCACAGTGTAC +
Preference number: 2 (lower is better)
Translates to: CHAVGDIVVQLHTRHQGFDQTQP*LWGTVY
Trigger: GTACACTGTGCCCCACAAGCAGGGCTGGGTCTGGTC...GAAGCCCTGATGCCGGGTGTGGAGCTGTACCACTATGTCACCGACAGCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCAAGCAGGTGGCTGGTaGCAGCAGTCTTGCTACTCA +
Preference number: 2 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGQAGGW*QQSCYS
Trigger: TGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: PLCRRLIWPANCRLISSDGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEARLHAK*RPHKQV
Trigger: CACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCT...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETAGGEL*RLHAKW
Trigger: CCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACA +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGLALSV*QRAGIT
Trigger: TGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TGCCATGCTGTCGGTGACATAGTGGTACAGCTCCACACCCGGCATCAGGGCTTCCTTCAGAGCCAGCGTTaGCCCCAAAGGCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: CHAVGDIVVQLHTRHQGFLQSQR*PQRQDQ
Trigger: CTGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAG...GAAGCCCTGATGCCGGGTGTGGAGCTGTACCACTATGTCACCGACAGCATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSQDPMG*SIKCET
Trigger: GGTTTCACACTTTATCGACCACCCCATGGGGTCCTG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAAAGATGGCTGGCCAGTaGGACAGAACAGGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: DWETSRQPPRGRSERHIRKMAGQ*DRTGLA
Trigger: AGCCAAACCTGTTCTGTCCCACTGGCCAGCCATCTT...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCATGTGAGCAAAGATaGCTGGCCAGTGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPCEQR*LASGTE
Trigger: TTCTGTCCCACTGGCCAGCCATCTTTGCTCACATGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTGGCTGGACTATGCTTaGGCTCTGCTTGCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAWLDYA*ALLAGC
Trigger: GCAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTAAGACCTTCTCTGAGGTaGCTGGACTATGCTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PADVCEPRAAQAARLHEVRPSLR*LDYAWA
Trigger: AGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCT...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCCCGTGCGCTGCACGTaGATGAGGGGTGGCACCCCA +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREPVRCT*MRGGTP
Trigger: TGGGGTGCCACCCCTCATCCACGTGCAGCGCACGGG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGAGGCCCAGTGGCTACTaGTGGTACACTGCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: LAESWDHTLLSTSLPLQARPSGY*WYTALP
Trigger: AGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCCTCAGAGATTCAAGGTaGTTGAGGAAGCTACGGTTA +
Preference number: 2 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPLRDSR*LRKLRL
Trigger: TAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAG...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAAACTATGCTTGGGCTCTaGTTGCTGGCTGCCACTCTT +
Preference number: 2 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQTMLGL*LLAATL
Trigger: AAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCATAGT...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGGAGTATTGGCACCACTaGCACCGGCTGAGGTGGCGG +
Preference number: 2 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLEYWHH*HRLRWR
Trigger: CCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTC...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGTCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: LAESWDHTLLSTSLPLQASQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTGCTTTTGCTTGGCCTaGGCAGTGTCAGTGCGTGGC +
Preference number: 2 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMCFCLA*AVSVRG
Trigger: GCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCAGTCCAATTCCTCTaGAAAAGACACTTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPVQFL*KRHFRA
Trigger: GGCTCTGAAGTGTCTTTTTCAGAGGAATTGGACTGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQCCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGACCTCAAAAGCATCCTTaGAGCAAACAAGACGGCTTG +
Preference number: 2 (lower is better)
Translates to: DWETSRQPPRGRSERHIRPQKHP*SKQDGL
Trigger: CAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGG...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp AGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACCTCTTAACCACACTCTaGTTTTGCTTGGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: SMRARTPDSGTGCSGSRDLLTTL*FCLAWA
Trigger: TGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAG...GTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 2 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETRLHAK*RPHKQV
Trigger: CACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCT...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGAGGEL*RLHAKW
Trigger: CCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCAAGTCAGGGAATACTaGTTTCACTGGCATCTCGAG +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSQVREY*FHWHLE
Trigger: CTCGAGATGCCAGTGAAACCAGTATTCCCTGACTTG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACCACTCTGCTTTTGCTTaGCCTGGGCAGTGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: PLCRRLIWPANCRLISSDHSAFA*PGQCQC
Trigger: GCACTGACACTGCCCAGGCCAAGCAAAAGCAGAGTG...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCTCTTCCTGTGCCACTaGTTCAGCCTCAGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETLFLCH*FSLSWS
Trigger: GCTCCAGCTGAGGCTGAACCAGTGGCACAGGAAGAG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTTGAGGCTGGGACGATaGGAGTTCTGGAAGCTATGC +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALRLGR*EFWKLC
Trigger: GCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp TTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACTCTGAGTaGAGGCTGGGACGATGGGAGTTCTGGAAGCTATGCCAACGGAGC +
Preference number: 2 (lower is better)
Translates to: LIWPANCRLISSDSE*RLGRWEFWKLCQRS
Trigger: GCTCCGTTGGCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTaGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCC +
Preference number: 2 (lower is better)
Translates to: TVYFSMNAVSRSSEP*CRRLIWPANCRLIS
Trigger: GGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp CGGATCTTTGCCACTTCCATGGCACACAGGTGTCCAAAGACTTTGTaGTACCAGTCAGGAGAACGGCCCCTGAGGTCAGCCCGGCAGATG +
Preference number: 2 (lower is better)
Translates to: RIFATSMAHRCPKTL*YQSGERPLRSARQM
Trigger: CATCTGCCGGGCTGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGACACCTGTGTGCCATGGAAGTGGCAAAGATCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTTTCTCCCCTCTATGTaGAGAGGAGCTTTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSFLPSM*RGALGK
Trigger: CTTTCCTAAAGCTCCTCTGCACATAGAGGGGAGAAA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGGTGGCAGCAGTCTTaGTACTCATGCGATTCTCTT +
Preference number: 2 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGWWQQS*YSCDSL
Trigger: AAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: IYTNETARGDWGCPALHPAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCCTCAAAAGCATCCTTaGAGCAAACAAGACGGCTTG +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGPQKHP*SKQDGL
Trigger: CAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAGCTCTGCTTGCTGGCTaGCACTCTTTTCCTTCCGCC +
Preference number: 2 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGALLAG*HSFPSA
Trigger: GGCGGAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGC...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGACAGGACAGGCAGCTaGAGCCACCTGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRDRTGS*SHLGLA
Trigger: AGCCAGGCCCAGGTGGCTCCAGCTGCCTGTCCTGTC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACA +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETLALSV*QRAGIT
Trigger: TGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTACAGCTCGTGGTGACTaGGGCTGCCCTGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRTARGD*GCPALH
Trigger: GTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTTGCTGGAAGGCCCAGTaGCTACTGATGGTACACTGC +
Preference number: 2 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPCWKAQ*LLMVHC
Trigger: GCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCA...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp CCATGGGCCGGAACCTCCATCTGGCTGAGAGCCTCAGCTTGGCATTaGACCTCAACTGTGGCTATTTCTACTGATGAAGTGGCCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PWAGTSIWLRASAWH*TSTVAISTDEVASS
Trigger: GGAGGAGGCCACTTCATCAGTAGAAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGGCCAGGTCTCTGCTTaGGAAAGGGGCTGTTATGTT +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETGQVSA*ERGCYV
Trigger: AACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCCTCGCTCCCTTGGTaGCCAGGGGGCCTGGGTGGT +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPSLPW*PGGLGG
Trigger: ACCACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAAGGGGGAGTGGAGTTaGCTAAATTCTCTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSKGEWS*LNSLFL
Trigger: GAGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTT...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACAGTCTTGCTACTCATaGGATTCTCTTCTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: ETARGDWGCPALHPCAHSQSCYS*DSLLFS
Trigger: CGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAA +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREAVEAS*QVAASQ
Trigger: TTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCACCACACTCTGCTTTTaGTTGGCCTGGGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETTTLCF*LAWAVS
Trigger: TGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGT...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGGGCGCCAGGCACACTaGCAGGTTGCCTGCTGTCAT +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRGRQAH*QVACCH
Trigger: ATGACAGCAGGCAACCTGGCAGTGTGCCTGGCGCCC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHSQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRERLHAK*RPHKQV
Trigger: CACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCT...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACA +
Preference number: 2 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHLALSV*QRAGIT
Trigger: TGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACC +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETQDPMG*SIKCET
Trigger: GGTTTCACACTTTATCGACCACCCCATGGGGTCCTG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CAA 90 bp CCTCCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTC +
Preference number: 2 (lower is better)
Translates to: PPVQPQKHPCSKQDG*PSQSGRELGSHIAV
Trigger: GACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CAA 90 bp TGCTGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTaGAGGAAGCTACGGTTACGATGGCGCTTCTTGGCTTTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: CWLPLFSFRLRDSRC*RKLRLRWRFLALSW
Trigger: CCAGGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp AATCCAGCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTaGGAGACCTTCTCTGAGGTGGCTGGACTATGCTTGGGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: NPAERKPRQLRKDEA*ETFSEVAGLCLGSA
Trigger: AGCAGAGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTGGCATCTCGAGACTTaGGAAAGGAAGGTACTCCAC +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETWHLET*ERKVLH
Trigger: GTGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGCCTCAGCTGGAGCCTaGGCCGGAGCCAGGACTGCT +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSASAGA*AGARTA
Trigger: AGCAGTCCTGGCTCCGGCTCAGGCTCCAGCTGAGGC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTTTCTCCCCTCTATGTaGAGAGGAGCTTTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAFLPSM*RGALGK
Trigger: CTTTCCTAAAGCTCCTCTGCACATAGAGGGGAGAAA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTAAGGGGGAGTGGAGTTaGCTAAATTCTCTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGKGEWS*LNSLFL
Trigger: GAGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGTCTTGCTACTCATaGGATTCTCTTCTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIQSCYS*DSLLFS
Trigger: CGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp AGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACCAGTCTTGCTACTCATaGGATTCTCTTCTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: SMRARTPDSGTGCSGSRDQSCYS*DSLLFS
Trigger: CGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTG...GTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACAAGCCAGCTCCGTGTaGTGGGGCCCTGGCACGCTC +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTQASSV*WGPGTL
Trigger: GAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 2 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 2 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQSQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGCTCACGGTGATGACTaGCAGAGAGGTGGCACTAAG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREAHGDD*QRGGTK
Trigger: CTTAGTGCCACCTCTCTGCCAGTCATCACCGTGAGC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGCTGTCCCCGGTAATCTaGGGTCTTGTTCCTCCTCAT +
Preference number: 2 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLLSPVI*GLVPPH
Trigger: ATGAGGAGGAACAAGACCCCAGATTACCGGGGACAG...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 90 bp ATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCTTCTCTTTTCGGGAGAGTAGAATAC +
Preference number: 2 (lower is better)
Translates to: MPSGGLTSRWLVAAV*LLMRFSSLFGRVEY
Trigger: GTATTCTACTCTCCCGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGACGCTCTCACAGCTTaGGGTCGCTGGCAGGCCAGG +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTDALTA*GRWQAR
Trigger: CCTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGGCATGGCTGCCCGTTaGGCCACAGGAGCCCCGGCG +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICGMAAR*ATGAPA
Trigger: CGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTC +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTPRGLP*SYSPSL
Trigger: GAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTTCTCCCCTCTATGTaGAGAGGAGCTTTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMFLPSM*RGALGK
Trigger: CTTTCCTAAAGCTCCTCTGCACATAGAGGGGAGAAA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCCTCAAAAGCATCCTTaGAGCAAACAAGACGGCTTG +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETPQKHP*SKQDGL
Trigger: CAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCAGCACTTACTTTCCTaGTGGAAGGCCCAGTGGCTA +
Preference number: 2 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFQHLLS*WKAQWL
Trigger: TAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCTG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGAGGTTGATCTGGCCTaGAAACTGCCGGTTGATCTC +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREEVDLA*KLPVDL
Trigger: GAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGACAGGACAGGCAGCTaGAGCCACCTGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTDRTGS*SHLGLA
Trigger: AGCCAGGCCCAGGTGGCTCCAGCTGCCTGTCCTGTC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCACAGCTCGTGGTGACTaGGGCTGCCCTGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSTARGD*GCPALH
Trigger: GTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAACAGCTCGTGGTGACTaGGGCTGCCCTGCGCTCCAC +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTTARGD*GCPALH
Trigger: GTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTGCAGCACCATGTCCTaGGGCACCTGGAAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRECSTMS*GTWKSF
Trigger: GAAACTTTTCCAGGTGCCCCAGGACATGGTGCTGCA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTTCTGGATCCTGGACTTaGCCCCAGACTTGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRSGSWT*PQTCGR
Trigger: TCTTCCGCAAGTCTGGGGTCAAGTCCAGGATCCAGA...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTTTCTCCCCTCTATGTaGAGAGGAGCTTTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: AWPKATQDPMGWSIKCETFLPSM*RGALGK
Trigger: CTTTCCTAAAGCTCCTCTGCACATAGAGGGGAGAAA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGTGGTGGCAGCAGTCTTaGTACTCATGCGATTCTCTT +
Preference number: 2 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLWWQQS*YSCDSL
Trigger: AAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCA...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCCTCAAAAGCATCCTTaGAGCAAACAAGACGGCTTG +
Preference number: 2 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHPQKHP*SKQDGL
Trigger: CAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCACATCCCTATCTATaGCAAATCGTCATGTCACAT +
Preference number: 2 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEASHPYL*QIVMSH
Trigger: ATGTGACATGACGATTTGGCATAGATAGGGATGTGA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGCAAGTTGTCATACGTaGTGGCATGGCTGCCCGTTG +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRASCHT*WHGCPL
Trigger: CAACGGGCAGCCATGCCAGCACGTATGACAACTTGC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAGACAGGACAGGCAGCTaGAGCCACCTGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTDRTGS*SHLGLA
Trigger: AGCCAGGCCCAGGTGGCTCCAGCTGCCTGTCCTGTC...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 2 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 2 (lower is better)
Translates to: HKQVAGGSSLATHAILFSGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACCCAGTGGCCTTTGAATaGCATTTGAATTTCCATGTG +
Preference number: 2 (lower is better)
Translates to: PLCRRLIWPANCRLISSDPVAFE*HLNFHV
Trigger: CACATGGAAATTCAAATGCCATTCAAAGGCCACTGG...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGTTTCTACTGATGAAGTaGCCTCCTCCTCTTCCTCAT +
Preference number: 2 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRFLLMK*PPPLPH
Trigger: ATGAGGAAGAGGAGGAGGCCACTTCATCAGTAGAAA...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCTGAGAGCCTCAGCTTaGCATTTGACCTCAACTGTG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRELRASA*HLTSTV
Trigger: CACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATGGTTCAGCCTCAGCTaGAGCCTGAGCCGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTWFSLS*SLSRSQ
Trigger: CTGGCTCCGGCTCAGGCTCCAGCTGAGGCTGAACCA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACTTCAGAGCCAGCGTTaGCCCCAAAGGCAGGACCAG +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTLQSQR*PQRQDQ
Trigger: CTGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCTGGTAATGCTTTATTaGTTTGAGGGATCCTGCTGC +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRELVMLY*FEGSCC
Trigger: GCAGCAGGATCCCTCAAATCAATAAAGCATTACCAG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTACCACTGCCACCGGCTaGGGTGGCGGCCCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICTTATG*GGGPVL
Trigger: AAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGT...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCTCTTAACCACACTCTaGTTTTGCTTGGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRLLTTL*FCLAWA
Trigger: TGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGACAGGACAGGCAGCTaGAGCCACCTGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICDRTGS*SHLGLA
Trigger: AGCCAGGCCCAGGTGGCTCCAGCTGCCTGTCCTGTC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATGCTTTTGCTTGGCCTaGGCAGTGTCAGTGCGTGGC +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTCFCLA*AVSVRG
Trigger: GCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCAGTCCAATTCCTCTaGAAAAGACACTTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPVQFL*KRHFRA
Trigger: GGCTCTGAAGTGTCTTTTTCAGAGGAATTGGACTGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCAGTCTTGCTACTCATaGGATTCTCTTCTCTTTTCG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREQSCYS*DSLLFS
Trigger: CGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACAGGGGCCAGGTCTCTaGTTGAGAAAGGGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTQGPGL*LRKGLL
Trigger: TAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNAGGEL*RLHAKW
Trigger: CCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCCAGTGGCCTTTGAATaGCATTTGAATTTCCATGTG +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREPVAFE*HLNFHV
Trigger: CACATGGAAATTCAAATGCCATTCAAAGGCCACTGG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGAATTACAGTGGTGGTTaGGACCCATCTCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRENYSGG*DPSHFS
Trigger: ACTGAAATGAGATGGGTCCCAACCACCACTGTAATT...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATGCAGGAGGTTGATCTaGCCTGCAAACTGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTCRRLI*PANCRL
Trigger: CAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAGCACCAGTGGCCTTTaGATGGCATTTGAATTTCCA +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRSTSGL*MAFEFP
Trigger: TGGAAATTCAAATGCCATTCAAAGGCCACTGGTGCT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATGGCATCTCGAGACTTaGGAAAGGAAGGTACTCCAC +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTWHLET*ERKVLH
Trigger: GTGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGAGGTCTCATTCATTTaGCGCAGGTTCTGGATCCTG +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSEVSFI*RRFWIL
Trigger: CAGGATCCAGAACCTGCGTCAAATGAATGAGACCTC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAAGGGGGAGTGGAGTTaGCTAAATTCTCTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRKGEWS*LNSLFL
Trigger: GAGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAGTCTTCATTCTGCTTaGTTTGAAAATGAACCTCCA +
Preference number: 2 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQSLHSA*FENEPP
Trigger: TGGAGGTTCATTTTCAAAGCAAGCAGAATGAAGACT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCAGTGGCCTTTGAATaGCATTTGAATTTCCATGTG +
Preference number: 2 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPVAFE*HLNFHV
Trigger: CACATGGAAATTCAAATGCCATTCAAAGGCCACTGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATTGGGCTCTGCTTGCTaGCTGCCACTCTTTTCCTTC +
Preference number: 2 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTLGSAC*LPLFSF
Trigger: GAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCATTACAGGCTCAGCTaGGTACAGCTCAGGCAAGTT +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSHYRLS*VQLRQV
Trigger: AACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCAGTCCAATTCCTCTaGAAAAGACACTTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPVQFL*KRHFRA
Trigger: GGCTCTGAAGTGTCTTTTTCAGAGGAATTGGACTGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTGGTGGCAGCAGTCTTaGTACTCATGCGATTCTCTT +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSWWQQS*YSCDSL
Trigger: AAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCAAGCAGGTGGCTGGTaGCAGCAGTCTTGCTACTCA +
Preference number: 2 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNQAGGW*QQSCYS
Trigger: TGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATTACGATGGCGCTTCTTaGCTTTGTCCTGGGGACCCT +
Preference number: 2 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNYDGAS*LCPGDP
Trigger: AGGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTA...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGTGGTCGATAAAGTGTaGAACCCAAGTCAGGGAATA +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSVVDKV*NPSQGI
Trigger: TATTCCCTGACTTGGGTTTCACACTTTATCGACCAC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGGCCAGGTCTCTGCTTaGGAAAGGGGCTGTTATGTT +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICGQVSA*ERGCYV
Trigger: AACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAAGCACCAGTGGCCTTTaGATGGCATTTGAATTTCCA +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTSTSGL*MAFEFP
Trigger: TGGAAATTCAAATGCCATTCAAAGGCCACTGGTGCT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAGCACCAGTGGCCTTTaGATGGCATTTGAATTTCCA +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSSTSGL*MAFEFP
Trigger: TGGAAATTCAAATGCCATTCAAAGGCCACTGGTGCT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACTACTGATGGTACACTaGTCTTCCTCTTCTGAGTCT +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTLLMVH*SSSSES
Trigger: AGACTCAGAAGAGGAAGAGCAGTGTACCATCAGTAG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTAAGATGGCTGGCCAGTaGGACAGAACAGGTTTGGCT +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICKMAGQ*DRTGLA
Trigger: AGCCAAACCTGTTCTGTCCCACTGGCCAGCCATCTT...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAAGGGGGAGTGGAGTTaGCTAAATTCTCTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSKGEWS*LNSLFL
Trigger: GAGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAAATTACAGTGGTGGTTaGGACCCATCTCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTNYSGG*DPSHFS
Trigger: ACTGAAATGAGATGGGTCCCAACCACCACTGTAATT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTTGGTGGCAGCAGTCTTaGTACTCATGCGATTCTCTT +
Preference number: 2 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICWWQQS*YSCDSL
Trigger: AAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCA...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp GCTCTGCTCCTGACAGCGGCACCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTCCCTTGGTGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: ALLLTAAPRGLP*SYSPSLPWCPG
Trigger: CCCTGGGCACCAAGGGAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGGTGCCGCTGTCAGGAGCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp GCCAGGCCTCCCAGGCCTTCCGAGTATTGGCACCACTaGCACCGGCTGAGGTGGCGGCCCAGTTCTTGGCCC +
Preference number: 3 (lower is better)
Translates to: ARPPRPSEYWHH*HRLRWRPSSWP
Trigger: GGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTGGGAGGCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAATTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp TACAGCTCCACACCCGGCATCAGGGCTTCCAGCACCTaGGCCCGCAGCAGATCCTCATCCCAGAGGGCCCGC +
Preference number: 3 (lower is better)
Translates to: YSSTPGIRASST*ARSRSSSQRAR
Trigger: GCGGGCCCTCTGGGATGAGGATCTGCTGCGGGCCCAGGTGCTGGAAGCCCTGATGCCGGGTGTGGAGCTGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp GGTGGCACTAAGCTCGGTGAGGACGCTCTCACAGCTTaGGGTCGCTGGCAGGCCAGGGCTCGGTGGGGCCAA +
Preference number: 3 (lower is better)
Translates to: GGTKLGEDALTA*GRWQARARWGQ
Trigger: TTGGCCCCACCGAGCCCTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTCCTCACCGAGCTTAGTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp GGAACGTGCACCAGGCAATCACCCCGGTGTGTCCACTaGGGATGCCGGAACGAGGCCACAGGCCAGGCCTCC +
Preference number: 3 (lower is better)
Translates to: GTCTRQSPRCVH*GCRNEATGQAS
Trigger: GGAGGCCTGGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGGTGCACGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp CCGTGTGCTGGGGCCCTGGCACGCTCATCCAGCCCTTaGAGCGCTCAGCAGCATCACGCAGCAGGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: PCAGALARSSSP*SAQQHHAAGPG
Trigger: TCCAGGACCTGCTGCGTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp CTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: LCPCRRGAVEAS*QVAASQAGGWW
Trigger: CCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 72 bp CCTGCAGGCGGGGAGCTGTGGAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: PAGGELWRLHAK*RPHKQVAGGSS
Trigger: ACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 72 bp GGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATaGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCC +
Preference number: 3 (lower is better)
Translates to: GYSSGKLSYVLA*LPVEPQEPRRP
Trigger: GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGC +
Preference number: 3 (lower is better)
Translates to: ETARGDWGCPALHPCAHSLLSTS*PLQAGS
Trigger: GCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGCTTACCCCTGCAGCTaGGGCCTGACGCAGCTCAGC +
Preference number: 3 (lower is better)
Translates to: DWETSRQPPRGRSERHIRAYPCS*GLTQLS
Trigger: GCTGAGCTGCGTCAGGCCCAAGCTGCAGGGGTAAGC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp ACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTaGCCGTTGAGCCACAGGAGCCCCGGCGCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: TAQASCHTCWHG*PLSHRSPGAPH
Trigger: GTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp CCAGCCCAAGGCTCACAGCTTTGTCTCAGGGCCCGCTaGCTGCAGGGTGGGGAAGGAGTCCCGGATCTTTGC +
Preference number: 3 (lower is better)
Translates to: PAQGSQLCLRAR*LQGGEGVPDLC
Trigger: GCAAAGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGGGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp GCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAG +
Preference number: 3 (lower is better)
Translates to: AVDLFAPAGGEL*RLHAKWRPHKQ
Trigger: CTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCAGCAAGGTGGCGGCTaGTGCTGCTGCCAACCACTG +
Preference number: 3 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSQQGGG*CCCQPL
Trigger: CAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp CCCAAGGCTCACAGCTTTGTCTCAGGGCCCGCTGCCTaGAGGGTGGGGAAGGAGTCCCGGATCTTTGCCACT +
Preference number: 3 (lower is better)
Translates to: PKAHSFVSGPAA*RVGKESRIFAT
Trigger: AGTGGCAAAGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp CAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTaGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGC +
Preference number: 3 (lower is better)
Translates to: QLGTAQASCHTC*HGCPLSHRSPG
Trigger: GCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp CCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACTaGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCA +
Preference number: 3 (lower is better)
Translates to: PDSGTGCSGSRD*ETSRQPPRGRS
Trigger: TGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp CGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTACTaGGATGTGAGCATGAGGGCTCGCACACCCGACTCT +
Preference number: 3 (lower is better)
Translates to: RERPKPQGSMRY*DVSMRARTPDS
Trigger: AGAGTCGGGTGTGCGAGCCCTCATGCTCACATCCCAGTACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTTTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGC +
Preference number: 3 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALLSTS*PLQAGS
Trigger: GCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTAGGGAATGTGCCTGGTTaGTGGTCCCCAGGAACGTGC +
Preference number: 3 (lower is better)
Translates to: PADVCEPRAAQAARLHEVGNVPG*WSPGTC
Trigger: GCACGTTCCTGGGGACCACAAACCAGGCACATTCCC...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCTTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 3 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGRPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp CCAGGCCTTCCGAGTATTGGCACCACTGCCACCGGCTaGGGTGGCGGCCCAGTTCTTGGCCCTGTAAAATCC +
Preference number: 3 (lower is better)
Translates to: PGLPSIGTTATG*GGGPVLGPVKS
Trigger: GGATTTTACAGGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp CAAAGTCGCGGCAGGGATGGGGTGCCATGCTGTCGGTaGCATAGTGGTACAGCTCCACACCCGGCATCAGGG +
Preference number: 3 (lower is better)
Translates to: QSRGRDGVPCCR*HSGTAPHPASG
Trigger: CCCTGATGCCGGGTGTGGAGCTGTACCACTATGTCACCGACAGCATGGCACCCCATCCCTGCCGCGACTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp GCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: ALSVWQRAGITH*CRPLCPCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp GCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTaGTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCC +
Preference number: 3 (lower is better)
Translates to: AQLGTAQASCHT*WHGCPLSHRSP
Trigger: GGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp GCAGTCACTGATCATGTGCGACAGGCCCTGGGTGGCTaGCATGTTGTCACTCAGGTCCCTAGGGCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: AVTDHVRQALGG*HVVTQVPRAWP
Trigger: AGGCCAGGCCCTAGGGACCTGAGTGACAACATGGCAGCCACCCAGGGCCTGTCGCACATGATCAGTGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp CACCACTGCCACCGGCTGAGGTGGCGGCCCAGTTCTTaGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGAC +
Preference number: 3 (lower is better)
Translates to: HHCHRLRWRPSS*PCKIQLRGSHD
Trigger: GTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp CTGGGATGTGAGCATGAGGGCTCGCACACCCGACTCTaGCACAGGTTGTTCCGGATCCAGGGACTGGGAGAC +
Preference number: 3 (lower is better)
Translates to: LGCEHEGSHTRL*HRLFRIQGLGD
Trigger: GTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCTCACATCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: DWETSRQPPRGRSERHIRSKQDG*PSQSGR
Trigger: TCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCT...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCGGGCCAGGTCTCTGCTaGAGAAAGGGGCTGTTATGT +
Preference number: 3 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSGPGLC*RKGLLC
Trigger: ACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCC...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGGGACGCTCTCACAGCTaGAGGTCGCTGGCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRGRSHS*RSLAGQ
Trigger: CTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTCC...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp CAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATGC +
Preference number: 3 (lower is better)
Translates to: QRAGITHCCRPL*PCRRGAVEASC
Trigger: GCATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp CTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTaGCAACCACTGATCCTTGGGGAGGAGCTGGTAGAT +
Preference number: 3 (lower is better)
Translates to: LIGEQQGGGLCC*QPLILGEELVD
Trigger: ATCTACCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp GTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTaGTGCCAACCACTGATCCTTGGGGAGGAGCTGGTA +
Preference number: 3 (lower is better)
Translates to: VLIGEQQGGGLC*CQPLILGEELV
Trigger: TACCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp CCTTCCGAGTATTGGCACCACTGCCACCGGCTGAGGTaGCGGCCCAGTTCTTGGCCCTGTAAAATCCAGCTG +
Preference number: 3 (lower is better)
Translates to: PSEYWHHCHRLR*RPSSWPCKIQL
Trigger: CAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp TCAATGGACAGGGAGCGAGGGAATGTGCCTGGTTTGTaGTCCCCAGGAACGTGCACCAGGCAATCACCCCGG +
Preference number: 3 (lower is better)
Translates to: SMDRERGNVPGL*SPGTCTRQSPR
Trigger: CCGGGGTGATTGCCTGGTGCACGTTCCTGGGGACCACAAACCAGGCACATTCCCTCGCTCCCTGTCCATTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp GTAGCACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTaGCGGCTTGTGCTGCTGCCAACCACTGATCCTTGG +
Preference number: 3 (lower is better)
Translates to: VAPLGSHRGAAR*RLVLLPTTDPW
Trigger: CCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTAAAAGTGGTGGTGAGCTaGCTGGTGAAGATGGGCTCA +
Preference number: 3 (lower is better)
Translates to: PADVCEPRAAQAARLHEVKVVVS*LVKMGS
Trigger: TGAGCCCATCTTCACCAGCAAGCTCACCACCACTTT...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp TCTGGGTACATGGCCCGAGACCACAGCTCTACTCGTTaGTGTAGCCCCCACACGTGCTGGAGGATGTCGTCT +
Preference number: 3 (lower is better)
Translates to: SGYMARDHSSTR*CSPHTCWRMSS
Trigger: AGACGACATCCTCCAGCACGTGTGGGGGCTACAGCAACGAGTAGAGCTGTGGTCTCGGGCCATGTACCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp TCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTaGAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTG +
Preference number: 3 (lower is better)
Translates to: SMNAVSRSSEPL*RRLIWPANCRL
Trigger: CAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp GGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTC +
Preference number: 3 (lower is better)
Translates to: GGFMPSGGLTSR*LVAAVLLLMRF
Trigger: GAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 72 bp CAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTaGCTGAGAGCCTCAGCTTGGCATTTGACCTCAACT +
Preference number: 3 (lower is better)
Translates to: QAGDSPWAGTSI*LRASAWHLTST
Trigger: AGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp AGCCGCAGCAGTGAGCCCTTGTGCAGGAGGTTGATCTaGCCTGCAAACTGCCGGTTGATCTCCAGCGACTCT +
Preference number: 3 (lower is better)
Translates to: SRSSEPLCRRLI*PANCRLISSDS
Trigger: AGAGTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp GGTGGCTGCCATGTTGTCACTCAGGTCCCTAGGGCCTaGCCTGCCAATGAGGCTGCGTTTGCTCTTGATCCT +
Preference number: 3 (lower is better)
Translates to: GGCHVVTQVPRA*PANEAAFALDP
Trigger: AGGATCAAGAGCAAACGCAGCCTCATTGGCAGGCCAGGCCCTAGGGACCTGAGTGACAACATGGCAGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCACTTCAGAGCCAGCGTaGGCCCCAAAGGCAGGACCA +
Preference number: 3 (lower is better)
Translates to: AWPKATQDPMGWSIKCETTSEPA*APKAGP
Trigger: TGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAGT...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTGCAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: QAQLGTAQASCHTCWHGCSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...GCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTTACGATGGCGCTTCTaGGCTTTGTCCTGGGGACCC +
Preference number: 3 (lower is better)
Translates to: IYTNETARGDWGCPALHPLRWRF*ALSWGP
Trigger: GGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTAA...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAAGAGATTCAAGGTGCTaGAGGAAGCTACGGTTACGA +
Preference number: 3 (lower is better)
Translates to: DWETSRQPPRGRSERHIRRDSRC*RKLRLR
Trigger: TCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCT...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCTCCAGCGACTCTGAGTaGAGGCTGGGACGATGGGAG +
Preference number: 3 (lower is better)
Translates to: ELVDLEESGGELAGEDGLSSDSE*RLGRWE
Trigger: CTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGA...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp CTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACTCTaGGTTGAGGCTGGGACGATGGGAGTTCTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: LACKLPVDLQRL*VEAGTMGVLEA
Trigger: AGCTTCCAGAACTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 3 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTGGCATCTCGAGACTaGAGAAAGGAAGGTACTCCA +
Preference number: 3 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALASRD*RKEGTP
Trigger: TGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTAACCACACTCTGCTTTaGCTTGGCCTGGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPNHTLL*LGLGSV
Trigger: GACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTT...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCCAATGAGGCTGCGTTaGCTCTTGATCCTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: AWPKATQDPMGWSIKCETPMRLR*LLILGE
Trigger: CTCTCCCAGGATCAAGAGCAAACGCAGCCTCATTGG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATCACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGGGTGGCTGCCATGTaGTCACTCAGGTCCCTAGGG +
Preference number: 3 (lower is better)
Translates to: ITQQVLDILFHVEAQAYPWVAAM*SLRSLG
Trigger: CCCTAGGGACCTGAGTGACAACATGGCAGCCACCCA...GGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp GCTGTCCCCGGTAATCTGGGGTCTTGTTCCTCCTCATaGACTTGGGCATTGACCAGACCCAGCCCTGCTTGT +
Preference number: 3 (lower is better)
Translates to: AVPGNLGSCSSS*TWALTRPSPAC
Trigger: ACAAGCAGGGCTGGGTCTGGTCAATGCCCAAGTTCATGAGGAGGAACAAGACCCCAGATTACCGGGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp GCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAGTCTTaGTACTCATGCGATTCTCTTCTCTTTTCGGGAGAG +
Preference number: 3 (lower is better)
Translates to: AASQAGGWWQQS*YSCDSLLFSGE
Trigger: CTCTCCCGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 72 bp TGCGGAAAGATGAGGCTTTGGAGACCTTCTCTGAGGTaGCTGGACTATGCTTGGGCTCTGCTTGCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: CGKMRLWRPSLR*LDYAWALLAGC
Trigger: GCAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp GGCGCCAGGCACACTGCCAGGTTGCCTGCTGTCATCTaGTTTTCCTCGGCAGAGGCAATGTCACTTAAGAAG +
Preference number: 3 (lower is better)
Translates to: GARHTARLPAVI*FSSAEAMSLKK
Trigger: CTTCTTAAGTGACATTGCCTCTGCCGAGGAAAACCAGATGACAGCAGGCAACCTGGCAGTGTGCCTGGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp AGTTTCTTGCAGTCACTGATCATGTGCGACAGGCCCTaGGTGGCTGCCATGTTGTCACTCAGGTCCCTAGGG +
Preference number: 3 (lower is better)
Translates to: SFLQSLIMCDRP*VAAMLSLRSLG
Trigger: CCCTAGGGACCTGAGTGACAACATGGCAGCCACCCAGGGCCTGTCGCACATGATCAGTGACTGCAAGAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 3 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATAACCACACTCTGCTTTaGCTTGGCCTGGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHNHTLL*LGLGSV
Trigger: GACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTT...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGTACAGCTCAGGCAAGTaGTCATACGTGCTGGCATGG +
Preference number: 3 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRYSSGK*SYVLAW
Trigger: CCATGCCAGCACGTATGACAACTTGCCTGAGCTGTA...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATCACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCCCCTTGTGCAGGAGGTaGATCTGGCCTGCAAACTGC +
Preference number: 3 (lower is better)
Translates to: ITQQVLDILFHVEAQAYPPLCRR*IWPANC
Trigger: GCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG...GGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTGAT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp AGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTaGGCCCTTGTGCAGGAGGTTGATCTGGCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: SVLLHERGKPQQ*ALVQEVDLACK
Trigger: TTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR GCA 72 bp TCAGAGGACCCCATAGGAGACCAGCACTTACTTTCCTaGTGGAAGGCCCAGTGGCTACTGATGGTACACTGC +
Preference number: 3 (lower is better)
Translates to: SEDPIGDQHLLS*WKAQWLLMVHC
Trigger: GCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCTGGTCTCCTATGGGGTCCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp AGAGATTCAAGGTGCTTGAGGAAGCTACGGTTACGATaGCGCTTCTTGGCTTTGTCCTGGGGACCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: RDSRCLRKLRLR*RFLALSWGPSW
Trigger: CCAGGAGGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp ATCTTCAGCCTCAGCCCCAACCATTACAGGCTCAGCTaGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGC +
Preference number: 3 (lower is better)
Translates to: IFSLSPNHYRLS*VQLRQVVIRAG
Trigger: GCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATGGTTGGGGCTGAGGCTGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGAAGGGGGAGTGGAGTaGCCTAAATTCTCTTTTTCT +
Preference number: 3 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAEGGVE*PKFSFS
Trigger: AGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTTC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 3 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTGCACCTCAAAAGCATCCTaGCAGCAAACAAGACGGCTT +
Preference number: 3 (lower is better)
Translates to: QAQLGTAQASCHTCWHGCTSKAS*QQTRRL
Trigger: AAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGT...GCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTACTTCAGAGCCAGCGTaGGCCCCAAAGGCAGGACCA +
Preference number: 3 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRTSEPA*APKAGP
Trigger: TGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAGT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp ACACGTGCTGGAGGATGTCGTCTAGGTGAGCATAGCTaGCCCCACTCTCCTCATCATCTTCATCTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: TRAGGCRLGEHS*PHSPHHLHLQP
Trigger: AGGCTGAAGATGAAGATGATGAGGAGAGTGGGGGCAGCTATGCTCACCTAGACGACATCCTCCAGCACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp AGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACCCAAGTCAGGGAATAC +
Preference number: 3 (lower is better)
Translates to: SAWPKATQDPMG*SIKCETQVREY
Trigger: GTATTCCCTGACTTGGGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CCA 72 bp AGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTaGAGACCTTCTCTGAGGTGGCTGGACTATGCTTGG +
Preference number: 3 (lower is better)
Translates to: RGSHDNCGKMRL*RPSLRWLDYAW
Trigger: CCAAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCTGGCATCTCGAGACTaGAGAAAGGAAGGTACTCCA +
Preference number: 3 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHLASRD*RKEGTP
Trigger: TGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCAG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 3 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRERPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAGGCTGCGTTTGCTCTaGATCCTGGGAGAGGGGCTA +
Preference number: 3 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRRLRLL*ILGEGL
Trigger: TAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCCT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp GGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTaGAACCCAAGTCAGGGAATACTGGTTTCACTGGCA +
Preference number: 3 (lower is better)
Translates to: GYTGPHGVVDKV*NPSQGILVSLA
Trigger: TGCCAGTGAAACCAGTATTCCCTGACTTGGGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp CTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTaGTTGAGGAAGCTACGGTTACGATGGCGCTTCTTG +
Preference number: 3 (lower is better)
Translates to: LPLFSFRLRDSR*LRKLRLRWRFL
Trigger: CAAGAAGCGCCATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CCA 72 bp TGGGCCGGAACCTCCATCTGGCTGAGAGCCTCAGCTTaGCATTTGACCTCAACTGTGGCTATTTCTACTGAT +
Preference number: 3 (lower is better)
Translates to: WAGTSIWLRASA*HLTSTVAISTD
Trigger: ATCAGTAGAAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGC +
Preference number: 3 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTLLSTS*PLQAGS
Trigger: GCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCAGGCCTTCCGAGTATaGGCACCACTGCCACCGGCT +
Preference number: 3 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSQAFRV*APLPPA
Trigger: AGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 3 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGAAATTACAGTGGTGGTaGGGACCCATCTCATTTCAG +
Preference number: 3 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLKLQWW*GPISFQ
Trigger: CTGAAATGAGATGGGTCCCAACCACCACTGTAATTT...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp CACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTTaGGGAAGCTACGGTTACGATGGCGCTTCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: HSFPSASEIQGA*GSYGYDGASWL
Trigger: AAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp TCTCATTCATTTGACGCAGGTTCTGGATCCTGGACTTaGCCCCAGACTTGCGGAAGATGCCTACTTGGTCCA +
Preference number: 3 (lower is better)
Translates to: SHSFDAGSGSWT*PQTCGRCLLGP
Trigger: TGGACCAAGTAGGCATCTTCCGCAAGTCTGGGGTCAAGTCCAGGATCCAGAACCTGCGTCAAATGAATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCTGGCATCTCGAGACTaGAGAAAGGAAGGTACTCCA +
Preference number: 3 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRLASRD*RKEGTP
Trigger: TGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCAG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACTTCATTCTGCTTGCTTaGAAAATGAACCTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: PLCRRLIWPANCRLISSDFILLA*KMNLQF
Trigger: AAACTGGAGGTTCATTTTCAAAGCAAGCAGAATGAA...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR TCA 72 bp AGCACTTACTTTCCTGCTGGAAGGCCCAGTGGCTACTaGTGGTACACTGCTCTTCCTCTTCTGAGTCTTCAT +
Preference number: 3 (lower is better)
Translates to: STYFPAGRPSGY*WYTALPLLSLH
Trigger: ATGAAGACTCAGAAGAGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 3 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAAACCACACTCTGCTTTaGCTTGGCCTGGGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTNHTLL*LGLGSV
Trigger: GACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTSKQDG*PSQSGR
Trigger: TCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 3 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTRPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 3 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSRPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp GCCAAATCGTCATGTCACATATTAGGGGCCCGTCAGTaGCCACTCTTAACTCAGCCTCATAAAATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: AKSSCHILGARQ*PLLTQPHKIQH
Trigger: ATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAATATGTGACATGACGATTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR GCA 72 bp AGAAAGGAAGGTACTCCACTCTCACATCCCTATCTATaGCAAATCGTCATGTCACATATTAGGGGCCCGTCA +
Preference number: 3 (lower is better)
Translates to: RKEGTPLSHPYL*QIVMSHIRGPS
Trigger: TGACGGGCCCCTAATATGTGACATGACGATTTGGCATAGATAGGGATGTGAGAGTGGAGTACCTTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGA +
Preference number: 3 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICSKQDG*PSQSGR
Trigger: TCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCT...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 3 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR-3UTR CAA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAACCTCAAAAGCATCCTaGCAGCAAACAAGACGGCTT +
Preference number: 3 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTTSKAS*QQTRRL
Trigger: AAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTGGTCCCTGCGCTCCATaGGCCGGCCCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPGPCAP*AGPARG
Trigger: TCCCCTCGCGGGGCCGGCTCATGGAGCGCAGGGACC...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGGCATGGCTGCCCGTTaGGCCACAGGAGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGGMAAR*ATGAPA
Trigger: CGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCC...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGGTCCCTGCGCTCCATaGGCCGGCCCCGCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSGPCAP*AGPARG
Trigger: TCCCCTCGCGGGGCCGGCTCATGGAGCGCAGGGACC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCAGCCTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTTCCTGCTCACTGTCCTaGGCTGGGGCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FSLGPGWGLSMGRNLHLASCSLS*AGAGAG
Trigger: CCCGGCCCCGGCCCCAGCCCAGGACAGTGAGCAGGA...AGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAGGCTGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GGGGCACGGCCTGGCAAGGGCAAGTCTGCTGGCTCGGGTGGTAGGCTCACGGTGCGGGGCATTGATGCCTaGAGTCCAGCCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GARPGKGKSAGSGGRLTVRGIDA*SPARGP
Trigger: GGGGCCCCTGGCTGGACTCCAGGCATCAATGCCCCG...CACCGTGAGCCTACCACCCGAGCCAGCAGACTTGCCCTTGCCAGGCCGTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GCTGGCAGGCCAGGGCTCGGTGGGGCCAACAGATCAGAGGACCCCATAGGAGACGCCCCACCGCCTACCTaGCTGCCAGTCTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: AGRPGLGGANRSEDPIGDAPPPT*LPVCQA
Trigger: CGCCTGGCAGACTGGCAGCCAGGTAGGCGGTGGGGC...GTCTCCTATGGGGTCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTGCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATCCTGCTCACTGTCCTaGGCTGGGGCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSSCSLS*AGAGAG
Trigger: CCCGGCCCCGGCCCCAGCCCAGGACAGTGAGCAGGA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCGACGCTCTCACAGCTTaGGGTCGCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPDALTA*GRWQAR
Trigger: CCTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTC...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGCGGAGAGCAGCGGTTaGCGGGGCTCAGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: DWETSRQPPRGRSERHIRAESSG*RGSAAS
Trigger: CGAGGCAGCTGAGCCCCGGCAACCGCTGCTCTCCGC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGGCTGGCCCGTGCGCTaGACGTGGATGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DWETSRQPPRGRSERHIRGWPVR*TWMRGG
Trigger: GCCACCCCTCATCCACGTGCAGCGCACGGGCCAGCC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCCTCGCTCCCTTGGTaGCCAGGGGGCCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPSLPW*PGGLGG
Trigger: ACCACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGCCGCTGCCTGCAGGGTaGGGAAGGAGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LIPEGPLPENTMQHHSWGPLPAG*GRSPGS
Trigger: AGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGG...CCCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATCCCCCTCGCTCCCTTaGTGCCCAGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSSPSLP*CPGGLG
Trigger: ACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp CAGGCAAGTTGTCATACGTGCTGGCATGGCTGCCCGTaGAGCCACAGGAGCCCCGGCGCCCCTCACAGCCCC +
Preference number: 4 (lower is better)
Translates to: QASCHTCWHGCP*SHRSPGAPHSP
Trigger: GGGGCTGTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTGAGAGCCCGTTCACGGGGCATTaGTGCCTGGAGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGPGWGLSMGRNLHLAESPFTGH*CLESSQ
Trigger: CTGGCTGGACTCCAGGCATCAATGCCCCGTGAACGG...GCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGAGCCACGTCGTAGGCTaGCTGGCCCTCGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGSHVVG*LALVAD
Trigger: GTCTGCTACGAGGGCCAGTCAGCCTACGACGTGGCT...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCCGGCAGATGTGTGTaGGCCGAGAGCGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPGRCV*AESGPS
Trigger: GCTTGGGCCGCTCTCGGCTCACACACATCTGCCGGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCGGGGTCGGGCAGGGGTaGCGGTGCCAGCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGGVGQG*RCQPEE
Trigger: CTCTTCTGGCTGGCACCGTCACCCCTGCCCGACCCC...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR GCA 90 bp GCTGGCAGGCCAGGGCTCGGTGGGGCCAACAGATCAGAGGACCCCATAGGAGACCATAGCCGCAGGGGGTaGCCATCCGGTGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: AGRPGLGGANRSEDPIGDHSRRG*PSGAFL
Trigger: CAGGAAGGCACCGGATGGGCACCCCCTGCGGCTATG...GTCTCCTATGGGGTCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTGCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTTGTCTCAGGGCCCGCTaGCTGCAGGGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPCLRAR*LQGGEG
Trigger: TCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACA...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCCGGAGCCAGGACTGCTaGCTGGACTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQARSQDC*LDFSLG
Trigger: GCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGCTCCG...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACCCGTGCGCTGCACGTaGATGAGGGGTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSPVRCT*MRGGTP
Trigger: TGGGGTGCCACCCCTCATCCACGTGCAGCGCACGGG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTTCCCCCTCGCTCCCTTaGTGCCCAGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPISPSLP*CPGGLG
Trigger: ACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGA...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGACGCTCTCACAGCTTaGGGTCGCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSDALTA*GRWQAR
Trigger: CCTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGGCATGGCTGCCCGTTaGGCCACAGGAGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMGMAAR*ATGAPA
Trigger: CGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGGTAAGCCGCAGCAGTaGGCCCTTGTGCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGGKPQQ*ALVQEV
Trigger: AACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACC...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCGCTGCTGCCAACCACTaGTCCTTGGGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQAAAANH*SLGRSW
Trigger: CCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGC...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTGGGCCGGGAGGGCTaGGCTCAGCTGCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALGREG*AQLRCR
Trigger: CCTACAGCGCAGCTGAGCTCAGCCCTCCCGGCCCAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCCCGGCAGATGTGTGTaGGCCGAGAGCGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIPGRCV*AESGPS
Trigger: GCTTGGGCCGCTCTCGGCTCACACACATCTGCCGGG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCAGGAGAACGGCCCCTaGGGTCAGCCCGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSQENGP*GQPGRC
Trigger: ACATCTGCCGGGCTGACCTCAGGGGCCGTTCTCCTG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCTGGTCCCCAGGAACGTaGACCAGGCAATCACCCCGG +
Preference number: 4 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQAWSPGT*TRQSPR
Trigger: CCGGGGTGATTGCCTGGTGCACGTTCCTGGGGACCA...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCCATCCGGTGCCTTCCTaGAAGCCAGCTCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPHPVPS*KPAPCA
Trigger: AGCACACGGAGCTGGCTTGCAGGAAGGCACCGGATG...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCGGGGTGCCCATCCGGTaGCTTCCTGCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSGVPIR*LPASQL
Trigger: GAGCTGGCTTGCAGGAAGGCACCGGATGGGCACCCC...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTAGGGGTGCCCATCCGGTaGCTTCCTGCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PADVCEPRAAQAARLHEVGVPIR*LPASQL
Trigger: GAGCTGGCTTGCAGGAAGGCACCGGATGGGCACCCC...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCGTGGTGACTGGGGCTaGCCTGCGCTCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGRGDWG*PALHPC
Trigger: ACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTGAGCCCAGGAGGGACTaGTCCGTCCGGGACACACGC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIEPRRD*SVRDTR
Trigger: GCGTGTGTCCCGGACGGAGCAGTCCCTCCTGGGCTC...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTTGCCACCGGCTGAGGTaGCGGCCCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGCHRLR*RPSSWP
Trigger: GGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCA...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGCCCCACCGCCTACCTaGCTGCCAGTCTGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAAPPPT*LPVCQA
Trigger: CGCCTGGCAGACTGGCAGCCAGGTAGGCGGTGGGGC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGCCAGGACTGCTGGCTaGACTTCAGCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSARTAG*TSAWAQ
Trigger: CTGGGCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCGGGGCATTGATGCCTaGAGTCCAGCCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGRGIDA*SPARGP
Trigger: GGGGCCCCTGGCTGGACTCCAGGCATCAATGCCCCG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCTCTGTGGCAGTGGCTaGCCCGTGCGCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGLCGSG*PVRCTW
Trigger: CCACGTGCAGCGCACGGGCCAGCCACTGCCACAGAG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGCCAGCTCCGTGTGCTaGGGCCCTGGCACGCTCATC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGASSVC*GPGTLI
Trigger: GATGAGCGTGCCAGGGCCCCAGCACACGGAGCTGGC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCGCGTCCACCCCTTTaGGTTCGGGCGCTGACACAG +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPRPPL*VRALTQ
Trigger: CTGTGTCAGCGCCCGAACCCAAAGGGGTGGACGCGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR TCA 90 bp GGGGCACGGCCTGGCAAGGGCAAGTCTGCTGGCTCGGGTGGTAGGCTCACGGTGAGGCCCAGTGGCTACTaGTGGTACACTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GARPGKGKSAGSGGRLTVRPSGY*WYTALP
Trigger: AGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCT...CACCGTGAGCCTACCACCCGAGCCAGCAGACTTGCCCTTGCCAGGCCGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGCCTCAGCTGGAGCCTaGGCCGGAGCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAASAGA*AGARTA
Trigger: AGCAGTCCTGGCTCCGGCTCAGGCTCCAGCTGAGGC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTGAGAGCCCTTGTGCAGGAGGTTaGTCTGGCCTGCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: LGPGWGLSMGRNLHLAESPCAGG*SGLQTA
Trigger: GGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGG...GCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGGAGAACGGCCCCTaGGGTCAGCCCGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIQENGP*GQPGRC
Trigger: ACATCTGCCGGGCTGACCTCAGGGGCCGTTCTCCTG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGAGTATTGGCACCACTaGCACCGGCTGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSEYWHH*HRLRWR
Trigger: CCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCTGGCAGGCCAGGGCTCGGTGGGGCCAACAGATCAGAGGACCCCATAGGAGACGGTCCAGGCACTGGCTaGGCAAGTAGCGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: AGRPGLGGANRSEDPIGDGPGTG*ASSAWL
Trigger: AAGCCATGCGCTACTTGCGCAGCCAGTGCCTGGACC...GTCTCCTATGGGGTCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCCTGCGCTGTAGGAGCTaGACAGCTGCAGCACCATGT +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPLRCRS*TAAAPC
Trigger: ACATGGTGCTGCAGCTGTGCAGCTCCTACAGCGCAG...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGTCTCAGGGCCCGCTaGCTGCAGGGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGCLRAR*LQGGEG
Trigger: TCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPAVEAS*QVAASQ
Trigger: TTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGC...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGACAGGCCAGGGCTCGGTaGGGCCAACAGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DWETSRQPPRGRSERHIRQARAR*GQQIRG
Trigger: TCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTG...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTGCCACCGGCTGAGGTaGCGGCCCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEACHRLR*RPSSWP
Trigger: GGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTAGGCCTTCCGAGTATTaGCACCACTGCCACCGGCTG +
Preference number: 4 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPRPSEY*HHCHRL
Trigger: CAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCT...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGCTGGGGACTCTCCATaGGCCGGAACCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSAGDSP*AGTSIW
Trigger: CCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTGCCAGGACTGCTGGCTaGACTTCAGCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIARTAG*TSAWAQ
Trigger: CTGGGCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGC...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCGGAGCCAGGACTGCTaGCTGGACTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIRSQDC*LDFSLG
Trigger: GCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGCTCCG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCCCGTGCGCTGCACGTaGATGAGGGGTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAPVRCT*MRGGTP
Trigger: TGGGGTGCCACCCCTCATCCACGTGCAGCGCACGGG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAATGCTCTGTGGCAGTaGCTGGCCCGTGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSNALWQ*LARALH
Trigger: GTGCAGCGCACGGGCCAGCCACTGCCACAGAGCATT...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCGGGGAGCAGCAAGGTaGCGGCTTGTGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGRGAAR*RLVLLP
Trigger: TGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAAGGGCTTCCAGCACCTaGGCCCGCAGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSRASST*ARSRSS
Trigger: TGAGGATCTGCTGCGGGCCCAGGTGCTGGAAGCCCT...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp TTGGTCCAGGCACTGGCTGCGCAAGTAGCGCATGGCTaGCTGAATGCTCTGTGGCAGTGGCTGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: LVQALAAQVAHG*LNALWQWLARA
Trigger: CGCACGGGCCAGCCACTGCCACAGAGCATTCAGCAAGCCATGCGCTACTTGCGCAGCCAGTGCCTGGACCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGCCTCAGCTGGAGCCTaGGCCGGAGCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMASAGA*AGARTA
Trigger: AGCAGTCCTGGCTCCGGCTCAGGCTCCAGCTGAGGC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACGCCTCAGCTGGAGCCTaGGCCGGAGCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PLCRRLIWPANCRLISSDASAGA*AGARTA
Trigger: AGCAGTCCTGGCTCCGGCTCAGGCTCCAGCTGAGGC...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCGGTGGGTTCCCCGCCTaGATGTGCCTCCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGGGFPA*MCLLLT
Trigger: AGTGAGCAGGAGGCACATTCAGGCGGGGAACCCACC...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCCTGCAAACTGCCGGTTaGTCTCCAGCGACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPLQTAG*SPATLS
Trigger: ACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAG...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTGCCCTGCAGCTTGGGCCTaGCGCAGCTCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QAQLGTAQASCHTCWHGCPAAWA*RSSARA
Trigger: AGCCCTGGCTGAGCTGCGTCAGGCCCAAGCTGCAGG...GCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGAGGAAGCTACGGTTACGATGGCGCTTCTTGGCTTTGTCCTGGGGACCCTCCTTGCCGGGGCTCAGCTaGCTCGACAGCGGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LRKLRLRWRFLALSWGPSLPGLS*LDSGRL
Trigger: GAGGCGCCCGCTGTCGAGGCAGCTGAGCCCCGGCAA...GGAGGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCGCGGAGAGCAGCGGTTaGCGGGGCTCAGCTGCCTCG +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPAESSG*RGSAAS
Trigger: CGAGGCAGCTGAGCCCCGGCAACCGCTGCTCTCCGC...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTACCTGGCTGCCAGTCTaGCAGGCGGTGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGTWLPV*QAVSIL
Trigger: GAGGATGGACACCGCCTGGCAGACTGGCAGCCAGGT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTACGTGCTGGCATGGCTaGCCGTTGAGCCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGTCWHG*PLSHRS
Trigger: GCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGGGGTGCCCATCCGGTaGCTTCCTGCAAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAGVPIR*LPASQL
Trigger: GAGCTGGCTTGCAGGAAGGCACCGGATGGGCACCCC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCATAGCCGCAGGGGGTaGCCATCCGGTGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAHSRRG*PSGAFL
Trigger: CAGGAAGGCACCGGATGGGCACCCCCTGCGGCTATG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGCCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACGCTGGGGGCACGGCCTaGCAAGGGCAAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PLCRRLIWPANCRLISSDAGGTA*QGQVCW
Trigger: CCAGCAGACTTGCCCTTGCCAGGCCGTGCCCCCAGC...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTTCATACGTGCTGGCATaGCTGCCCGTTGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPSYVLA*LPVEPQ
Trigger: CTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGA...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTTCCAGGCCCCAGGTCTaGGTACATGGCCCGAGACCA +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPISRPQV*VHGPRP
Trigger: TGGTCTCGGGCCATGTACCCAGACCTGGGGCCTGGA...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGGTTCAGCCTCAGCTaGAGCCTGAGCCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGWFSLS*SLSRSQ
Trigger: CTGGCTCCGGCTCAGGCTCCAGCTGAGGCTGAACCA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTCCTGCTCACTGTCCTaGGCTGGGGCCGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHSCSLS*AGAGAG
Trigger: CCCGGCCCCGGCCCCAGCCCAGGACAGTGAGCAGGA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAAAATGCTCTGTGGCAGTaGCTGGCCCGTGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQNALWQ*LARALH
Trigger: GTGCAGCGCACGGGCCAGCCACTGCCACAGAGCATT...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCGGGGAGCAGCAAGGTaGCGGCTTGTGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEARGAAR*RLVLLP
Trigger: TGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCCGCTGCCTGCAGGGTaGGGAAGGAGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAPLPAG*GRSPGS
Trigger: AGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGACAGCTCGTGGTGACTaGGGCTGCCCTGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQATARGD*GCPALH
Trigger: GTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GCTGGCAGGCCAGGGCTCGGTGGGGCCAACAGATCAGAGGACCCCATAGGAGACTGCTTTTGCTTGGCCTaGGCAGTGTCAGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: AGRPGLGGANRSEDPIGDCFCLA*AVSVRG
Trigger: GCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCA...GTCTCCTATGGGGTCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCCCCGGTGTGTCCACTaGGGATGCCGGAACGAGGCC +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETPRCVH*GCRNEA
Trigger: GGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGGTGGGTTCCCCGCCTaGATGTGCCTCCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAGGFPA*MCLLLT
Trigger: AGTGAGCAGGAGGCACATTCAGGCGGGGAACCCACC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCCGTTCACGGGGCATTaGTGCCTGGAGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAPFTGH*CLESSQ
Trigger: CTGGCTGGACTCCAGGCATCAATGCCCCGTGAACGG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACCTTGTGCAGGAGGTTaGTCTGGCCTGCAAACTGCC +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSPCAGG*SGLQTA
Trigger: GGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGCGCTGCACGTGGATaGGGGGTGGCACCCCAAATA +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGCAARG*GVAPQI
Trigger: TATTTGGGGTGCCACCCCTCATCCACGTGCAGCGCA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCGCTCATCCAGCCCTTaGAGCGCTCAGCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGRSSSP*SAQQHH
Trigger: GTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTTGCCGGGGCTCAGCTaGCTCGACAGCGGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHLPGLS*LDSGRL
Trigger: GAGGCGCCCGCTGTCGAGGCAGCTGAGCCCCGGCAA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGCACCGCCTACCTGGCTaGCAGTCTGCCAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMHRLPG*QSARRC
Trigger: ACACCGCCTGGCAGACTGGCAGCCAGGTAGGCGGTG...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTACGTGCTGGCATGGCTaGCCGTTGAGCCACAGGAGC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEATCWHG*PLSHRS
Trigger: GCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGT...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACACAGCTCTACTCGTTaGTGTAGCCCCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSHSSTR*CSPHTC
Trigger: GCACGTGTGGGGGCTACAGCAACGAGTAGAGCTGTG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCGAGTTCTGGAAGCTATaGCAACGGAGCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPEFWKL*QRSFLQ
Trigger: CTGCAGGAAGCTCCGTTGGCATAGCTTCCAGAACTC...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGGCTGGCCCGTGCGCTaGACGTGGATGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPGWPVR*TWMRGG
Trigger: GCCACCCCTCATCCACGTGCAGCGCACGGGCCAGCC...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGCGGCTTGTGCTGCTaGCAACCACTGATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGGGLCC*QPLILG
Trigger: CCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTGGCGGCTTGTGCTGCTaGCAACCACTGATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIGGLCC*QPLILG
Trigger: CCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCC...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGCGCCAGGCACACTaGCAGGTTGCCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAGRQAH*QVACCH
Trigger: ATGACAGCAGGCAACCTGGCAGTGTGCCTGGCGCCC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACTGCGCTGTAGGAGCTaGACAGCTGCAGCACCATGT +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSLRCRS*TAAAPC
Trigger: ACATGGTGCTGCAGCTGTGCAGCTCCTACAGCGCAG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGCGGCAGGGATGGGGTaGCATGCTGTCGGTGACATA +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGAAGMG*HAVGDI
Trigger: TATGTCACCGACAGCATGGCACCCCATCCCTGCCGC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCCCTCGCTCCCTTGGTaGCCAGGGGGCCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHPSLPW*PGGLGG
Trigger: ACCACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCCAGGGGCCAGGTCTCTaGTTGAGAAAGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQAQGPGL*LRKGLL
Trigger: TAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTG...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTGCTCACGGTGATGACTaGCAGAGAGGTGGCACTAAG +
Preference number: 4 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPAHGDD*QRGGTK
Trigger: CTTAGTGCCACCTCTCTGCCAGTCATCACCGTGAGC...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGGCCGGTCACTCGAGCTaGGGGCACGGCCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLAGHSS*GHGLAR
Trigger: CCTTGCCAGGCCGTGCCCCCAGCTCGAGTGACCGGC...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCTTGGCTTTGTCCTaGGGACCCTCCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGFLALS*GPSWPW
Trigger: CCAGGGCCAGGAGGGTCCCCAGGACAAAGCCAAGAA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTAGGCCTTCCGAGTATTaGCACCACTGCCACCGGCTG +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIRPSEY*HHCHRL
Trigger: CAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCT...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACCAGGTCTGGGTACATaGCCCGAGACCACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSPGLGT*PETTAL
Trigger: TAGAGCTGTGGTCTCGGGCCATGTACCCAGACCTGG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGCTGGGGACTCTCCATaGGCCGGAACCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAAGDSP*AGTSIW
Trigger: CCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCGGAAGATGCCTACTTaGTCCAGGCACTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGRKMPT*SRHWLR
Trigger: GCGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCGGAAGATGCCTACTTaGTCCAGGCACTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIRKMPT*SRHWLR
Trigger: GCGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCATGTGCGACAGGCCCTaGGTGGCTGCCATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSMCDRP*VAAMLS
Trigger: TGACAACATGGCAGCCACCCAGGGCCTGTCGCACAT...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTCGCACACCCGACTCTaGCACAGGTTGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSSHTRL*HRLFRI
Trigger: GATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGACAGGACAGGCAGCTaGAGCCACCTGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMDRTGS*SHLGLA
Trigger: AGCCAGGCCCAGGTGGCTCCAGCTGCCTGTCCTGTC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGGCAGTGTCAGTGCGTaGCCAAAGGCTACACAGGAC +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSGSVSA*PKATQD
Trigger: GTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTGCTTTTGCTTGGCCTaGGCAGTGTCAGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSCFCLA*AVSVRG
Trigger: GCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp TGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CPLSLAESWDHT*LSTSLPLQAGS
Trigger: GCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CAA 72 bp CTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTaGTGCTGCTGCCAACCACTGATCCTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSVLIGEQQGGG*CCCQPLILGEE
Trigger: CTCCTCCCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 72 bp GAGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTaGTTCCGGATCCAGGGACTGGGAGACAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EHEGSHTRLWHR*FRIQGLGDKQA
Trigger: TGCCTGCTTGTCTCCCAGTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGGGCCCAGGCTGGGGACTCTCCATGGGCCGGAACCTCCATCTGGCTGAGAGCCCTGTAAAATCCAGCTaGGAGGAAGCCACGACAACT +
Preference number: 4 (lower is better)
Translates to: LGPGWGLSMGRNLHLAESPVKSS*EEATTT
Trigger: AGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGG...GCTCTCAGCCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGCCTGGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCACCACTGCCACCGGCTaGGGTGGCGGCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPTTATG*GGGPVL
Trigger: AAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGT...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGACCCCGGTGTGTCCACTaGGGATGCCGGAACGAGGCC +
Preference number: 4 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGPRCVH*GCRNEA
Trigger: GGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGG...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTGCGCTGCACGTGGATaGGGGGTGGCACCCCAAATA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEACAARG*GVAPQI
Trigger: TATTTGGGGTGCCACCCCTCATCCACGTGCAGCGCA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCTGGGCCGGGAGGGCTaGGCTCAGCTGCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQLGREG*AQLRCR
Trigger: CCTACAGCGCAGCTGAGCTCAGCCCTCCCGGCCCAG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGACTCTCCATTCTCATCTaGAGTGCCCCTCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: DWETSRQPPRGRSERHIRLSILI*SAPQAF
Trigger: GAAGGCCTGAGGGGCACTTCAGATGAGAATGGAGAG...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCACCGCCTACCTGGCTaGCAGTCTGCCAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETHRLPG*QSARRC
Trigger: ACACCGCCTGGCAGACTGGCAGCCAGGTAGGCGGTG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCGCAAGTTGTCATACGTaGTGGCATGGCTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSASCHT*WHGCPL
Trigger: CAACGGGCAGCCATGCCAGCACGTATGACAACTTGC...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGACCAGACCCAGCCCTaGTTGTGGGGCACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQADQTQP*LWGTVY
Trigger: GTACACTGTGCCCCACAAGCAGGGCTGGGTCTGGTC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGTCCAGGCACTGGCTaGGCAAGTAGCGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAGPGTG*ASSAWL
Trigger: AAGCCATGCGCTACTTGCGCAGCCAGTGCCTGGACC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTGGCGGCTTGTGCTaGTGCCAACCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGGGGLC*CQPLIL
Trigger: AAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTGCGCTCAGGCTTACCCCTaGAGCTTGGGCCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: QAQLGTAQASCHTCWHGCAQAYP*SLGLTQ
Trigger: CTGCGTCAGGCCCAAGCTGCAGGGGTAAGCCTGAGC...GCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCAAGCCAGCTCCGTGTaGTGGGGCCCTGGCACGCTC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHQASSV*WGPGTL
Trigger: GAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTTG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCGGAGTCCCGGATCTTTaGCACTTCCATGGCACACAG +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSGVPDL*HFHGTQ
Trigger: CTGTGTGCCATGGAAGTGGCAAAGATCCGGGACTCC...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTCTCAGGGCCCGCTaGCTGCAGGGTGGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPCLRAR*LQGGEG
Trigger: TCCTTCCCCACCCTGCAGGCAGCGGGCCCTGAGACA...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTGGAGACCTTCTCTAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AERKPRQLRKDEALETFSRGPGW*HPGTSP
Trigger: TGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCT...AGAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATTTGAGGGATCCTGCTaGACCTGGCTCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSFEGSC*TWLPTS
Trigger: AGAGGTAGGGAGCCAGGTGCAGCAGGATCCCTCAAA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGCTTCACCTGCAGCAATaGGAAGCACTTCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LIPEGPLPENTMQHHSWGLHLQQ*EALHLP
Trigger: AGGAAGGTGAAGTGCTTCCCATTGCTGCAGGTGAAG...CCCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATGCTGGAAGGCCCAGTaGCTACTGATGGTACACTGC +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSCWKAQ*LLMVHC
Trigger: GCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCTGGGGGCACGGCCTaGCAAGGGCAAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPAGGTA*QGQVCW
Trigger: CCAGCAGACTTGCCCTTGCCAGGCCGTGCCCCCAGC...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTGCGAGGGAATGTGCCTaGTTTGTGGTCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIARECA*FVVPRN
Trigger: GTTCCTGGGGACCACAAACCAGGCACATTCCCTCGC...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGCTGAGAGCCTCAGCTTaGCATTTGACCTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: PHPRGPAPGEHDAAPQLGLRASA*HLTSTV
Trigger: CACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAG...CCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGGACGATGGGAGTTCTaGAAGCTATGCCAACGGAGC +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSGRWEF*KLCQRS
Trigger: GCTCCGTTGGCATAGCTTCCAGAACTCCCATCGTCC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GCTGGCAGGCCAGGGCTCGGTGGGGCCAACAGATCAGAGGACCCCATAGGAGACTTGAGGCTGGGACGATaGGAGTTCTGGAAGCTATGC +
Preference number: 4 (lower is better)
Translates to: AGRPGLGGANRSEDPIGDLRLGR*EFWKLC
Trigger: GCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAA...GTCTCCTATGGGGTCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCTCTGTGGCAGTGGCTaGCCCGTGCGCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHLCGSG*PVRCTW
Trigger: CCACGTGCAGCGCACGGGCCAGCCACTGCCACAGAG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCCAGCTCCGTGTGCTaGGGCCCTGGCACGCTCATC +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPASSVC*GPGTLI
Trigger: GATGAGCGTGCCAGGGCCCCAGCACACGGAGCTGGC...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTTGCTTTTGCTTGGCCTaGGCAGTGTCAGTGCGTGGC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGCFCLA*AVSVRG
Trigger: GCCACGCACTGACACTGCCCAGGCCAAGCAAAAGCA...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp GCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCATG +
Preference number: 4 (lower is better)
Translates to: AESWDHTLLSTS*PLQAGSCGGFM
Trigger: CATGAAGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
CDS-3UTR TCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGGTGGGTTCCCCGCCTaGATGTGCCTCCTGCTCACT +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETGGFPA*MCLLLT
Trigger: AGTGAGCAGGAGGCACATTCAGGCGGGGAACCCACC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCTGCAAACTGCCGGTTaGTCTCCAGCGACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGLQTAG*SPATLS
Trigger: ACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCATGAACTTGGGCATTaGCCAGACCCAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGHELGH*PDPALL
Trigger: AAGCAGGGCTGGGTCTGGTCAATGCCCAAGTTCATG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGTCTTGTTCCTCCTCATaGACTTGGGCATTGACCAGA +
Preference number: 4 (lower is better)
Translates to: LIPEGPLPENTMQHHSWGSCSSS*TWALTR
Trigger: TCTGGTCAATGCCCAAGTTCATGAGGAGGAACAAGA...CCCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTTCTGGATCCTGGACTTaGCCCCAGACTTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPISGSWT*PQTCGR
Trigger: TCTTCCGCAAGTCTGGGGTCAAGTCCAGGATCCAGA...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp GGGGCACGGCCTGGCAAGGGCAAGTCTGCTGGCTCGGGTGGTAGGCTCACGGTGAGCACCAGTGGCCTTTaGATGGCATTTGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: GARPGKGKSAGSGGRLTVSTSGL*MAFEFP
Trigger: TGGAAATTCAAATGCCATTCAAAGGCCACTGGTGCT...CACCGTGAGCCTACCACCCGAGCCAGCAGACTTGCCCTTGCCAGGCCGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp AGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACTGCTTGGGCTCTGCTTaGTGGCTGCCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SMRARTPDSGTGCSGSRDCLGSA*WLPLFS
Trigger: GGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCA...GTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCACCTGGCTGCCAGTCTaGCAGGCGGTGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETTWLPV*QAVSIL
Trigger: GAGGATGGACACCGCCTGGCAGACTGGCAGCCAGGT...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGACCTGGCTGCCAGTCTaGCAGGCGGTGTCCATCCTC +
Preference number: 4 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRTWLPV*QAVSIL
Trigger: GAGGATGGACACCGCCTGGCAGACTGGCAGCCAGGT...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACTAGGTGAGCATAGCTaGCCCCACTCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSLGEHS*PHSPHH
Trigger: ATGATGAGGAGAGTGGGGGCAGCTATGCTCACCTAG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTAGCAGTGAGCCCTTGTaGAGGAGGTTGATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGSSEPL*RRLIWP
Trigger: AGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCAGCAGTGAGCCCTTGTaGAGGAGGTTGATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGSSEPL*RRLIWP
Trigger: AGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCT...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAAGGTCCCGGAAATACTaGTTTAGCAGGTCAGCCACG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSRSRKY*FSRSAT
Trigger: CGTGGCTGACCTGCTAAAGCAGTATTTCCGGGACCT...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCAAGGTGGCGGCTTGTaGTGCTGCCAACCACTGATC +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAQGGGL*CCQPLI
Trigger: GATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGCTCAGGCTTACCCCTaGAGCTTGGGCCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETAQAYP*SLGLTQ
Trigger: CTGCGTCAGGCCCAAGCTGCAGGGGTAAGCCTGAGC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCAAGCCAGCTCCGTGTaGTGGGGCCCTGGCACGCTC +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSQASSV*WGPGTL
Trigger: GAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTTG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCCAAGCCAGCTCCGTGTaGTGGGGCCCTGGCACGCTC +
Preference number: 4 (lower is better)
Translates to: ITQQVLDILFHVEAQAYPQASSV*WGPGTL
Trigger: GAGCGTGCCAGGGCCCCAGCACACGGAGCTGGCTTG...GGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGCGGCAGGGATGGGGTaGCATGCTGTCGGTGACATA +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMAAGMG*HAVGDI
Trigger: TATGTCACCGACAGCATGGCACCCCATCCCTGCCGC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETCCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGAGGAAGCTACGGTTACGATGGCGCTTCTTGGCTTTGTCCTGGGGACCCTCCTGCTGTCGACCTCTTTaGCCCTGCAGGCGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LRKLRLRWRFLALSWGPSCCRPL*PCRRGA
Trigger: AGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCA...GGAGGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTTCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCTGGGGGCACGGCCTaGCAAGGGCAAGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFAGGTA*QGQVCW
Trigger: CCAGCAGACTTGCCCTTGCCAGGCCGTGCCCCCAGC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTGCCACCGGCTGAGGTaGCGGCCCAGTTCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQCHRLR*RPSSWP
Trigger: GGGCCAAGAACTGGGCCGCCACCTCAGCCGGTGGCA...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGCGAGGGAATGTGCCTaGTTTGTGGTCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAARECA*FVVPRN
Trigger: GTTCCTGGGGACCACAAACCAGGCACATTCCCTCGC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGCTGGGGACTCTCCATaGGCCGGAACCTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETAGDSP*AGTSIW
Trigger: CCAGATGGAGGTTCCGGCCCATGGAGAGTCCCCAGC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCGCCAGGACTGCTGGCTaGACTTCAGCCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLARTAG*TSAWAQ
Trigger: CTGGGCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGC...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGGTTCAGCCTCAGCTaGAGCCTGAGCCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPWFSLS*SLSRSQ
Trigger: CTGGCTCCGGCTCAGGCTCCAGCTGAGGCTGAACCA...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCGGGGCATTGATGCCTaGAGTCCAGCCAGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRERGIDA*SPARGP
Trigger: GGGGCCCCTGGCTGGACTCCAGGCATCAATGCCCCG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATTGAGGCTGGGACGATaGGAGTTCTGGAAGCTATGC +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSLRLGR*EFWKLC
Trigger: GCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTTGCAGGAGGTTGATCTaGCCTGCAAACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGCRRLI*PANCRL
Trigger: CAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCA...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCACGTGGATGAGGGGTaGCACCCCAAATACGTGCTG +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAHVDEG*HPKYVL
Trigger: CAGCACGTATTTGGGGTGCCACCCCTCATCCACGTG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTTGCCTGCTGTCATCTaGTTTTCCTCGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSLPAVI*FSSAEA
Trigger: TGCCTCTGCCGAGGAAAACCAGATGACAGCAGGCAA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATTAGAGACATTGAGGTaGAAGATGGAGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSLETLR*KMEGAR
Trigger: CCTGGCGCCCTCCATCTTCCACCTCAATGTCTCTAA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGCTCCATGAGGTACTaGGATGTGAGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGGSMRY*DVSMRA
Trigger: AGCCCTCATGCTCACATCCCAGTACCTCATGGAGCC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRAGGEL*RLHAKW
Trigger: CCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGC...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCACTCTGCTTTTGCTTaGCCTGGGCAGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGHSAFA*PGQCQC
Trigger: GCACTGACACTGCCCAGGCCAAGCAAAAGCAGAGTG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAAGATGGCTGGCCAGTaGGACAGAACAGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSKMAGQ*DRTGLA
Trigger: AGCCAAACCTGTTCTGTCCCACTGGCCAGCCATCTT...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp CTCTCAATGGACAGGGAGCGAGGGAATGTGCCTGGTTaGTGGTCCCCAGGAACGTGCACCAGGCAATCACCC +
Preference number: 4 (lower is better)
Translates to: LSMDRERGNVPG*WSPGTCTRQSP
Trigger: GGGTGATTGCCTGGTGCACGTTCCTGGGGACCACAAACCAGGCACATTCCCTCGCTCCCTGTCCATTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 72 bp TTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTaGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: FSMNAVSRSSEP*CRRLIWPANCR
Trigger: CCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTAGGCCCAGTGGCTACTaGTGGTACACTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEARPSGY*WYTALP
Trigger: AGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCT...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGACGCTCTCACAGCTTaGGGTCGCTGGCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFDALTA*GRWQAR
Trigger: CCTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCTGTAAAATCCAGCTaGGAGGAAGCCACGACAACT +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPVKSS*EEATTT
Trigger: AGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTACCACTGCCACCGGCTaGGGTGGCGGCCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFTTATG*GGGPVL
Trigger: AAGAACTGGGCCGCCACCTCAGCCGGTGGCAGTGGT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGATCTCCAGCGACTCTaGGTTGAGGCTGGGACGATG +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMDLQRL*VEAGTM
Trigger: CATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATGCTGCTGCCAACCACTaGTCCTTGGGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHAAANH*SLGRSW
Trigger: CCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGC...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTCTCCATTCTCATCTaGAGTGCCCCTCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALSILI*SAPQAF
Trigger: GAAGGCCTGAGGGGCACTTCAGATGAGAATGGAGAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCACCGCCTACCTGGCTaGCAGTCTGCCAGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREHRLPG*QSARRC
Trigger: ACACCGCCTGGCAGACTGGCAGCCAGGTAGGCGGTG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCTAGGTGAGCATAGCTaGCCCCACTCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGLGEHS*PHSPHH
Trigger: ATGATGAGGAGAGTGGGGGCAGCTATGCTCACCTAG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGAGGTTGATCTGGCCTaGAAACTGCCGGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGEVDLA*KLPVDL
Trigger: GAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCAGACTTGCGGAAGATaGCTACTTGGTCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGQTCGR*LLGPGT
Trigger: AGTGCCTGGACCAAGTAGGCATCTTCCGCAAGTCTG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAGGGCGCCAGGCACACTaGCAGGTTGCCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGGRQAH*QVACCH
Trigger: ATGACAGCAGGCAACCTGGCAGTGTGCCTGGCGCCC...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSPRGLP*SYSPSL
Trigger: GAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCCCAGGGGGCTGCCCTaGTCTTATTCCCCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFPRGLP*SYSPSL
Trigger: GAGCGAGGGGGAATAAGAGCAGGGCAGCCCCCTGGG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCGTCCAGCAGAGGCATaGTGGCGCGTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQRPAEA*WRVGSF
Trigger: GAAGCTCCCCACGCGCCACCATGCCTCTGCTGGACG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTCAGGCCAGGGCTCGGTaGGGCCAACAGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPQARAR*GQQIRG
Trigger: TCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTG...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTGGGCTCTGCTTGCTaGCTGCCACTCTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGLGSAC*LPLFSF
Trigger: GAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTGGCTGGACTATGCTTaGGCTCTGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMWLDYA*ALLAGC
Trigger: GCAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTAGACCTTCTCTGAGGTaGCTGGACTATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGRPSLR*LDYAWA
Trigger: AGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGGAAAGATGAGGCTTTaGAGACCTTCTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSGKMRL*RPSLRW
Trigger: CCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTAGTTGTCATACGTGCTaGCATGGCTGCCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEASCHTC*HGCPLS
Trigger: GCTCAACGGGCAGCCATGCCAGCACGTATGACAACT...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACATTACAGGCTCAGCTaGGTACAGCTCAGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSHYRLS*VQLRQV
Trigger: AACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGATCCAGGCCCCAGGTCTaGGTACATGGCCCGAGACCA +
Preference number: 4 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGSRPQV*VHGPRP
Trigger: TGGTCTCGGGCCATGTACCCAGACCTGGGGCCTGGA...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCTTTCTACTGATGAAGTaGCCTCCTCCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPFLLMK*PPPLPH
Trigger: ATGAGGAAGAGGAGGAGGCCACTTCATCAGTAGAAA...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGCTCTTCCTGTGCCACTaGTTCAGCCTCAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMLFLCH*FSLSWS
Trigger: GCTCCAGCTGAGGCTGAACCAGTGGCACAGGAAGAG...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGACCCAGCCCTGCTTGTaGGGCACAGTGTACTTCTCC +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMTQPCL*GTVYFS
Trigger: GGAGAAGTACACTGTGCCCCACAAGCAGGGCTGGGT...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCGGGGAGCAGCAAGGTaGCGGCTTGTGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQRGAAR*RLVLLP
Trigger: TGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTTTGCCTGCTGTCATCTaGTTTTCCTCGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGLPAVI*FSSAEA
Trigger: TGCCTCTGCCGAGGAAAACCAGATGACAGCAGGCAA...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTTGCAGCACCATGTCCTaGGGCACCTGGAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPICSTMS*GTWKSF
Trigger: GAAACTTTTCCAGGTGCCCCAGGACATGGTGCTGCA...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAATGCAGCACCATGTCCTaGGGCACCTGGAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQCSTMS*GTWKSF
Trigger: GAAACTTTTCCAGGTGCCCCAGGACATGGTGCTGCA...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCGTGTGCTGGGGCCCTaGCACGCTCATCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSRVLGP*HAHPAL
Trigger: AAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCCGTGTGCTGGGGCCCTaGCACGCTCATCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGRVLGP*HAHPAL
Trigger: AAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACG...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGCTCCATGAGGTACTaGGATGTGAGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAGSMRY*DVSMRA
Trigger: AGCCCTCATGCTCACATCCCAGTACCTCATGGAGCC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTGGAGATCCCCCTCGCTCCCTTaGTGCCCAGGGGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KIQLRGSHDNCGKMRLWRSPSLP*CPGGLG
Trigger: ACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGA...TCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGGACAGGACAGGCAGCTaGAGCCACCTGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQDRTGS*SHLGLA
Trigger: AGCCAGGCCCAGGTGGCTCCAGCTGCCTGTCCTGTC...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCCTTCAGAGCCAGCGTTaGCCCCAAAGGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPLQSQR*PQRQDQ
Trigger: CTGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAG...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCACAGCTCGTGGTGACTaGGGCTGCCCTGCGCTCCAC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGTARGD*GCPALH
Trigger: GTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGCCCTTCCATCTGGCTaGCCCAGGGGCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREALPSG*PRGQVS
Trigger: AGAGACCTGGCCCCTGGGCCAGCCAGATGGAAGGGC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTATAGGCCCTTCCATCTaGCTGGCCCAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPIGPSI*LAQGPG
Trigger: ACCTGGCCCCTGGGCCAGCCAGATGGAAGGGCCTAT...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCCCGGTGTGTCCACTaGGGATGCCGGAACGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPRCVH*GCRNEA
Trigger: GGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAGCCACGTCGTAGGCTaGCTGGCCCTCGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQSHVVG*LALVAD
Trigger: GTCTGCTACGAGGGCCAGTCAGCCTACGACGTGGCT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGTTTCTTGCAGTCACTaGTCATGTGCGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAVSCSH*SCATGP
Trigger: AGGGCCTGTCGCACATGATCAGTGACTGCAAGAAAC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCTGCAGCTTGGGCCTaGCGCAGCTCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPAAWA*RSSARA
Trigger: AGCCCTGGCTGAGCTGCGTCAGGCCCAAGCTGCAGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGTGCCATGCTGTCGGTaGCATAGTGGTACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMVPCCR*HSGTAP
Trigger: TGGAGCTGTACCACTATGTCACCGACAGCATGGCAC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTCTGGTAATGCTTTATTaGTTTGAGGGATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPLVMLY*FEGSCC
Trigger: GCAGCAGGATCCCTCAAATCAATAAAGCATTACCAG...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCGGGAGCGAGGGAATGTaGCTGGTTTGTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLGSEGM*LVCGPQ
Trigger: CTGGGGACCACAAACCAGGCACATTCCCTCGCTCCC...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGAGTTCTGGAAGCTATaGCAACGGAGCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAEFWKL*QRSFLQ
Trigger: CTGCAGGAAGCTCCGTTGGCATAGCTTCCAGAACTC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCGACCAGACCCAGCCCTaGTTGTGGGGCACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLDQTQP*LWGTVY
Trigger: GTACACTGTGCCCCACAAGCAGGGCTGGGTCTGGTC...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCTGCGCTGTAGGAGCTaGACAGCTGCAGCACCATGT +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETLRCRS*TAAAPC
Trigger: ACATGGTGCTGCAGCTGTGCAGCTCCTACAGCGCAG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGCTCAGGCTTACCCCTaGAGCTTGGGCCTGACGCAG +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREAQAYP*SLGLTQ
Trigger: CTGCGTCAGGCCCAAGCTGCAGGGGTAAGCCTGAGC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCATCCGGTGCCTTCCTaGAAGCCAGCTCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHHPVPS*KPAPCA
Trigger: AGCACACGGAGCTGGCTTGCAGGAAGGCACCGGATG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCCTGGGCAGTGTCAGTaGGTGGCCAAAGGCTACACA +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETPGQCQ*VAKGYT
Trigger: TGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTACCACACTCTGCTTTTaGTTGGCCTGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEATTLCF*LAWAVS
Trigger: TGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGT...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGCAGGGGCCAGGTCTCTaGTTGAGAAAGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMQGPGL*LRKGLL
Trigger: TAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTG...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAGCAGCTGCCGCGGCTaGTTAGCCGTTGTCAACCCG +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQSSCRG*LAVVNP
Trigger: CGGGTTGACAACGGCTAAGCAGCCGCGGCAGCTGCT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR GCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTAGCCAGAAGAGCAGCTaGCGCGGCTGCTTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPSQKSS*RGCLAV
Trigger: AACGGCTAAGCAGCCGCGGCAGCTGCTCTTCTGGCT...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR CCA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTGGAAAGATGAGGCTTTaGAGACCTTCTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIGKMRL*RPSLRW
Trigger: CCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCC...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTGGCGGCCCAGTTCTTaGCCCTGTAAAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMWRPSS*PCKIQL
Trigger: CAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCCTGAGAGCCTCAGCTTaGCATTTGACCTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGLRASA*HLTSTV
Trigger: CACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAG...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAGCCGGAACCTCCATCTaGCTGAGAGCCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGAGTSI*LRASAW
Trigger: CCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGC...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCTCAGCCTCATTCATaGAGTTCCCACTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPQPHS*SSHYCQ
Trigger: TTGACAGTAGTGGGAACTCCATGAATGAGGCTGAGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTACCTCAGCCTCATTCATaGAGTTCCCACTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: PADVCEPRAAQAARLHEVPQPHS*SSHYCQ
Trigger: TTGACAGTAGTGGGAACTCCATGAATGAGGCTGAGG...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCTCTGTGGCAGTGGCTaGCCCGTGCGCTGCACGTGG +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRLCGSG*PVRCTW
Trigger: CCACGTGCAGCGCACGGGCCAGCCACTGCCACAGAG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCATGTGCGACAGGCCCTaGGTGGCTGCCATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETMCDRP*VAAMLS
Trigger: TGACAACATGGCAGCCACCCAGGGCCTGTCGCACAT...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRRLHAK*RPHKQV
Trigger: CACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCT...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCCTTCAGAGCCAGCGTTaGCCCCAAAGGCAGGACCAG +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLLQSQR*PQRQDQ
Trigger: CTGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAG...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCACAAGTCAGGGAATACTaGTTTCACTGGCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSQVREY*FHWHLE
Trigger: CTCGAGATGCCAGTGAAACCAGTATTCCCTGACTTG...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCCATGTGAGCAAAGATaGCTGGCCAGTGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAPCEQR*LASGTE
Trigger: TTCTGTCCCACTGGCCAGCCATCTTTGCTCACATGG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTTTGGCCTCGGCTTCTaGAGGCCGCGTCCACCCCTT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREFGLGF*RPRPPL
Trigger: AAGGGGTGGACGCGGCCTCCAGAAGCCGAGGCCAAA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR TCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAATCCTGTTGCTTaGAGCCACTCACATGCTCTT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAGNPVA*SHSHAL
Trigger: AAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCCTGTAAAATCCAGCTaGGAGGAAGCCACGACAACT +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAPVKSS*EEATTT
Trigger: AGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGGCATGGCTGCCCGTTaGGCCACAGGAGCCCCGGCG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSGMAAR*ATGAPA
Trigger: CGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGGTAAGCCGCAGCAGTaGGCCCTTGTGCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGGKPQQ*ALVQEV
Trigger: AACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACGTTTCTTGCAGTCACTaGTCATGTGCGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: PLCRRLIWPANCRLISSDVSCSH*SCATGP
Trigger: AGGGCCTGTCGCACATGATCAGTGACTGCAAGAAAC...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCGCTCATCCAGCCCTTaGAGCGCTCAGCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQRSSSP*SAQQHH
Trigger: GTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCGTGCCATGCTGTCGGTaGCATAGTGGTACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPVPCCR*HSGTAP
Trigger: TGGAGCTGTACCACTATGTCACCGACAGCATGGCAC...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCAGGAGAACGGCCCCTaGGGTCAGCCCGGCAGATGT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRQENGP*GQPGRC
Trigger: ACATCTGCCGGGCTGACCTCAGGGGCCGTTCTCCTG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCCAGTCCAATTCCTCTaGAAAAGACACTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGPVQFL*KRHFRA
Trigger: GGCTCTGAAGTGTCTTTTTCAGAGGAATTGGACTGG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACGGCCAGGTCTCTGCTTaGGAAAGGGGCTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: PLCRRLIWPANCRLISSDGQVSA*ERGCYV
Trigger: AACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCC...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTGAGGGAATCCTGTTaGTTGAAGCCACTCACATGC +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALRESC*LKPLTC
Trigger: GCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGACTATGCTTGGGCTCTaGTTGCTGGCTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMTMLGL*LLAATL
Trigger: AAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCATAGT...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCTGTAGCCCCCACACGTaGTGGAGGATGTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLCSPHT*WRMSSR
Trigger: CCTAGACGACATCCTCCAGCACGTGTGGGGGCTACA...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGGGCGGCTTGTGCTGCTaGCAACCACTGATCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQGGLCC*QPLILG
Trigger: CCCAAGGATCAGTGGTTGGCAGCAGCACAAGCCGCC...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCAAGGTGGCGGCTTGTaGTGCTGCCAACCACTGATC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHQGGGL*CCQPLI
Trigger: GATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTCAAGGTGGCGGCTTGTaGTGCTGCCAACCACTGATC +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPQGGGL*CCQPLI
Trigger: GATCAGTGGTTGGCAGCAGCACAAGCCGCCACCTTG...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCAGGCCCTGGGTGGCTaGCATGTTGTCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQQALGG*HVVTQV
Trigger: GACCTGAGTGACAACATGGCAGCCACCCAGGGCCTG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCATCCGGTGCCTTCCTaGAAGCCAGCTCCGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQHPVPS*KPAPCA
Trigger: AGCACACGGAGCTGGCTTGCAGGAAGGCACCGGATG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGCGGCAGGGATGGGGTaGCATGCTGTCGGTGACATA +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSAAGMG*HAVGDI
Trigger: TATGTCACCGACAGCATGGCACCCCATCCCTGCCGC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGGAGTCCCGGATCTTTaGCACTTCCATGGCACACAG +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETGVPDL*HFHGTQ
Trigger: CTGTGTGCCATGGAAGTGGCAAAGATCCGGGACTCC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTATTTCTCCCCTCTATGTaGAGAGGAGCTTTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PADVCEPRAAQAARLHEVFLPSM*RGALGK
Trigger: CTTTCCTAAAGCTCCTCTGCACATAGAGGGGAGAAA...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCCAGTCTTGCTACTCATaGGATTCTCTTCTCTTTTCG +
Preference number: 4 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQAQSCYS*DSLLFS
Trigger: CGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTG...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTCTTAACCACACTCTaGTTTTGCTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALLTTL*FCLAWA
Trigger: TGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGCATTCTCATCTGAAGTaGCCCTCAGGCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMHSHLK*PSGLPD
Trigger: GTCTGGAAGGCCTGAGGGGCACTTCAGATGAGAATG...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTTCACCTGCAGCAATaGGAAGCACTTCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALHLQQ*EALHLP
Trigger: AGGAAGGTGAAGTGCTTCCCATTGCTGCAGGTGAAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTACGATGGCGCTTCTTaGCTTTGTCCTGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETYDGAS*LCPGDP
Trigger: AGGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGAAGCTACGGTTACGATaGCGCTTCTTGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAKLRLR*RFLALS
Trigger: GGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGAAAGATGAGGCTTTaGAGACCTTCTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAGKMRL*RPSLRW
Trigger: CCACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTGGCGGCCCAGTTCTTaGCCCTGTAAAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETWRPSS*PCKIQL
Trigger: CAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTAGGCCTTCCGAGTATTaGCACCACTGCCACCGGCTG +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSRPSEY*HHCHRL
Trigger: CAGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCT...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCAGTTGTCATACGTGCTaGCATGGCTGCCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPSCHTC*HGCPLS
Trigger: GCTCAACGGGCAGCCATGCCAGCACGTATGACAACT...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCGGAACCTCCATCTaGCTGAGAGCCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFAGTSI*LRASAW
Trigger: CCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTGAGGCTGGGACGATaGGAGTTCTGGAAGCTATGC +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMLRLGR*EFWKLC
Trigger: GCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCACCCAGCCCTGCTTGTaGGGCACAGTGTACTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLTQPCL*GTVYFS
Trigger: GGAGAAGTACACTGTGCCCCACAAGCAGGGCTGGGT...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTGCGCAAGTAGCGCATaGCTTGCTGAATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMCASSA*LAECSV
Trigger: CACAGAGCATTCAGCAAGCCATGCGCTACTTGCGCA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCGGAAGATGCCTACTTaGTCCAGGCACTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSRKMPT*SRHWLR
Trigger: GCGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCATGTCCTGGGGCACCTaGAAAAGTTTCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGMSWGT*KSFLQS
Trigger: TGACTGCAAGAAACTTTTCCAGGTGCCCCAGGACAT...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGATCGCACACCCGACTCTaGCACAGGTTGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGSHTRL*HRLFRI
Trigger: GATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGA...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTTCTTTGCCACTTCCATaGCACACAGGTGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGSLPLP*HTGVQR
Trigger: TCTTTGGACACCTGTGTGCCATGGAAGTGGCAAAGA...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPLALSV*QRAGIT
Trigger: TGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAG...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCAAGTCAGGGAATACTaGTTTCACTGGCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGQVREY*FHWHLE
Trigger: CTCGAGATGCCAGTGAAACCAGTATTCCCTGACTTG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATGGCAGTGTCAGTGCGTaGCCAAAGGCTACACAGGAC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHGSVSA*PKATQD
Trigger: GTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCC...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGCCCTTCCATCTGGCTaGCCCAGGGGCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRALPSG*PRGQVS
Trigger: AGAGACCTGGCCCCTGGGCCAGCCAGATGGAAGGGC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTTGAGGAAGCTAATAGGCCCTTCCATCTaGCTGGCCCAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WLPLFSFRLRDSRCLRKLIGPSI*LAQGPG
Trigger: ACCTGGCCCCTGGGCCAGCCAGATGGAAGGGCCTAT...TAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 72 bp GGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCTTCTCTTTTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: GGLTSRWLVAAV*LLMRFSSLFGR
Trigger: TCTCCCGAAAAGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
3UTR CAA 72 bp ACCATTACAGGCTCAGCTGGGTACAGCTCAGGCAAGTaGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TITGSAGYSSGK*SYVLAWLPVEP
Trigger: TGGCTCAACGGGCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 72 bp CCTGCAAACTGCCGGTTGATCTCCAGCGACTCTGAGTaGAGGCTGGGACGATGGGAGTTCTGGAAGCTATGC +
Preference number: 4 (lower is better)
Translates to: PANCRLISSDSE*RLGRWEFWKLC
Trigger: GCATAGCTTCCAGAACTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 72 bp GCCACTTCCATGGCACACAGGTGTCCAAAGACTTTGTaGTACCAGTCAGGAGAACGGCCCCTGAGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: ATSMAHRCPKTL*YQSGERPLRSA
Trigger: GGCTGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGACACCTGTGTGCCATGGAAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCCTCAGCTTGGCATTTaGCCTCAACTGTGGCTATTT +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAPQLGI*PQLWLF
Trigger: AAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCGTTCACGGGGCATTaGTGCCTGGAGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPFTGH*CLESSQ
Trigger: CTGGCTGGACTCCAGGCATCAATGCCCCGTGAACGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGTCTTGTTCCTCCTCATaGACTTGGGCATTGACCAGA +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQASCSSS*TWALTR
Trigger: TCTGGTCAATGCCCAAGTTCATGAGGAGGAACAAGA...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGGCTGCGTTTGCTCTTaGTCCTGGGAGAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGGCVCS*SWERGY
Trigger: ATAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGGCTGCGTTTGCTCTTaGTCCTGGGAGAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFGCVCS*SWERGY
Trigger: ATAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCGTTTCTTGCAGTCACTaGTCATGTGCGACAGGCCCT +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPVSCSH*SCATGP
Trigger: AGGGCCTGTCGCACATGATCAGTGACTGCAAGAAAC...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCTGGGCCGGGAGGGCTaGGCTCAGCTGCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSLGREG*AQLRCR
Trigger: CCTACAGCGCAGCTGAGCTCAGCCCTCCCGGCCCAG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTGGCATCTCGAGACTTaGGAAAGGAAGGTACTCCAC +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMWHLET*ERKVLH
Trigger: GTGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCAGTCTTCATTCTGCTTaGTTTGAAAATGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPSLHSA*FENEPP
Trigger: TGGAGGTTCATTTTCAAAGCAAGCAGAATGAAGACT...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCTCTGCTTGCTGGCTaGCACTCTTTTCCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFALLAG*HSFPSA
Trigger: GGCGGAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTTGCTTGGGCTCTGCTTaGTGGCTGCCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPCLGSA*WLPLFS
Trigger: GGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCA...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGACTATGCTTGGGCTCTaGTTGCTGGCTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRTMLGL*LLAATL
Trigger: AAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCATAGT...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGAGGTGGCTGGACTATaGTTGGGCTCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSEVAGL*LGSACW
Trigger: CCAGCAAGCAGAGCCCAAGCATAGTCCAGCCACCTC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCCACAGCTCTACTCGTTaGTGTAGCCCCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGHSSTR*CSPHTC
Trigger: GCACGTGTGGGGGCTACAGCAACGAGTAGAGCTGTG...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATAGCAGTGAGCCCTTGTaGAGGAGGTTGATCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHSSEPL*RRLIWP
Trigger: AGGCCAGATCAACCTCCTGCACAAGGGCTCACTGCT...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGGCTGGCCCGTGCGCTaGACGTGGATGAGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTGWPVR*TWMRGG
Trigger: GCCACCCCTCATCCACGTGCAGCGCACGGGCCAGCC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGGTGGCGGCTTGTGCTaGTGCCAACCACTGATCCTT +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSGGGLC*CQPLIL
Trigger: AAGGATCAGTGGTTGGCAGCAGCACAAGCCGCCACC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGTGGTGGCAGCAGTCTTaGTACTCATGCGATTCTCTT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAWWQQS*YSCDSL
Trigger: AAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCA...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGAVEAS*QVAASQ
Trigger: TTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGCCTCAAAAGCATCCTTaGAGCAAACAAGACGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAPQKHP*SKQDGL
Trigger: CAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGG...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTGCTGGAAGGCCCAGTaGCTACTGATGGTACACTGC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHCWKAQ*LLMVHC
Trigger: GCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCAGTTCTTGGCCCTGTAAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGATGCTGGAAGGCCCAGTaGCTACTGATGGTACACTGC +
Preference number: 4 (lower is better)
Translates to: PSSWPCKIQLRGSHDNCGCWKAQ*LLMVHC
Trigger: GCAGTGTACCATCAGTAGCCACTGGGCCTTCCAGCA...TCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTTACAGGGCCAAGAACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCAGGCCAGGGCTCGGTaGGGCCAACAGATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRQARAR*GQQIRG
Trigger: TCCTCTGATCTGTTGGCCCCACCGAGCCCTGGCCTG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGCCGGTCACTCGAGCTaGGGGCACGGCCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSAGHSS*GHGLAR
Trigger: CCTTGCCAGGCCGTGCCCCCAGCTCGAGTGACCGGC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTGGCTGGACTATGCTTaGGCTCTGCTTGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQWLDYA*ALLAGC
Trigger: GCAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCA...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTGGCGGCCCAGTTCTTaGCCCTGTAAAATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHWRPSS*PCKIQL
Trigger: CAGCTGGATTTTACAGGGCCAAGAACTGGGCCGCCA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGCGAGGGAATGTGCCTaGTTTGTGGTCCCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREARECA*FVVPRN
Trigger: GTTCCTGGGGACCACAAACCAGGCACATTCCCTCGC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCCAGGTCTGGGTACATaGCCCGAGACCACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREPGLGT*PETTAL
Trigger: TAGAGCTGTGGTCTCGGGCCATGTACCCAGACCTGG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTTCCAGGCCCCAGGTCTaGGTACATGGCCCGAGACCA +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRSRPQV*VHGPRP
Trigger: TGGTCTCGGGCCATGTACCCAGACCTGGGGCCTGGA...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCACCCAGCCCTGCTTGTaGGGCACAGTGTACTTCTCC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGTQPCL*GTVYFS
Trigger: GGAGAAGTACACTGTGCCCCACAAGCAGGGCTGGGT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCACGTGGATGAGGGGTaGCACCCCAAATACGTGCTG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFHVDEG*HPKYVL
Trigger: CAGCACGTATTTGGGGTGCCACCCCTCATCCACGTG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGATGTGCGACAGGCCCTaGGTGGCTGCCATGTTGTCA +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREMCDRP*VAAMLS
Trigger: TGACAACATGGCAGCCACCCAGGGCCTGTCGCACAT...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTGGAGAAGGGCTTCCAGCACCTaGGCCCGCAGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: KIQLRGSHDNCGKMRLWRRASST*ARSRSS
Trigger: TGAGGATCTGCTGCGGGCCCAGGTGCTGGAAGCCCT...TCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTCGCACACCCGACTCTaGCACAGGTTGTTCCGGATC +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRESHTRL*HRLFRI
Trigger: GATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACCCAGGGGGCCTGGGTaGTGCCACCCTGGGACCAGC +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTPRGPG*CHPGTS
Trigger: GCTGGTCCCAGGGTGGCACCACCCAGGCCCCCTGGG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTCAAGCAGGTGGCTGGTaGCAGCAGTCTTGCTACTCA +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPQAGGW*QQSCYS
Trigger: TGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTG...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCACTCTGCTTTTGCTTaGCCTGGGCAGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHHSAFA*PGQCQC
Trigger: GCACTGACACTGCCCAGGCCAAGCAAAAGCAGAGTG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTCCATGTGAGCAAAGATaGCTGGCCAGTGGGACAGAA +
Preference number: 4 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPPCEQR*LASGTE
Trigger: TTCTGTCCCACTGGCCAGCCATCTTTGCTCACATGG...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
3UTR CAA 72 bp CTCATGAACTTGGGCATTGACCAGACCCAGCCCTGCTaGTGGGGCACAGTGTACTTCTCCATGAACGCGGTA +
Preference number: 4 (lower is better)
Translates to: LMNLGIDQTQPC*WGTVYFSMNAV
Trigger: TACCGCGTTCATGGAGAAGTACACTGTGCCCCACAAGCAGGGCTGGGTCTGGTCAATGCCCAAGTTCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTAGGCCCAGTGGCTACTaGTGGTACACTGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSRPSGY*WYTALP
Trigger: AGGAAGAGCAGTGTACCATCAGTAGCCACTGGGCCT...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTCTTGTTCCTCCTCATaGACTTGGGCATTGACCAGA +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMSCSSS*TWALTR
Trigger: TCTGGTCAATGCCCAAGTTCATGAGGAGGAACAAGA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCTCTGGATCCTGGACTTaGCCCCAGACTTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGSGSWT*PQTCGR
Trigger: TCTTCCGCAAGTCTGGGGTCAAGTCCAGGATCCAGA...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTTGAGGAAGCTAGGCTGCGTTTGCTCTTaGTCCTGGGAGAGGGGCTAT +
Preference number: 4 (lower is better)
Translates to: WLPLFSFRLRDSRCLRKLGCVCS*SWERGY
Trigger: ATAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCC...TAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCGCTCATCCAGCCCTTaGAGCGCTCAGCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRRSSSP*SAQQHH
Trigger: GTGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGGTGCCATGCTGTCGGTaGCATAGTGGTACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQVPCCR*HSGTAP
Trigger: TGGAGCTGTACCACTATGTCACCGACAGCATGGCAC...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGTGGTCGATAAAGTGTaGAACCCAAGTCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAVVDKV*NPSQGI
Trigger: TATTCCCTGACTTGGGTTTCACACTTTATCGACCAC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTTGAAGCCACTCACATaGTCTTTTGGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETLKPLT*SFGLGF
Trigger: GAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGTTGAAGCCACTCACATaGTCTTTTGGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRLKPLT*SFGLGF
Trigger: GAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAA...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTCTCAGAGATTCAAGGTaGTTGAGGAAGCTACGGTTA +
Preference number: 4 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEALRDSR*LRKLRL
Trigger: TAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAG...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTACTATGCTTGGGCTCTaGTTGCTGGCTGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPTMLGL*LLAATL
Trigger: AAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCATAGT...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGGGAGCGAGGGAATGTaGCTGGTTTGTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRGSEGM*LVCGPQ
Trigger: CTGGGGACCACAAACCAGGCACATTCCCTCGCTCCC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATGAGTTCTGGAAGCTATaGCAACGGAGCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHEFWKL*QRSFLQ
Trigger: CTGCAGGAAGCTCCGTTGGCATAGCTTCCAGAACTC...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGATCTGGCCTGCAAACTaGCGGTTGATCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQIWPAN*RLISSD
Trigger: GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGAT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCATCTGGCCTGCAAACTaGCGGTTGATCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGIWPAN*RLISSD
Trigger: GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGAT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCCAGACTTGCGGAAGATaGCTACTTGGTCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLQTCGR*LLGPGT
Trigger: AGTGCCTGGACCAAGTAGGCATCTTCCGCAAGTCTG...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAGGGGGCCTGGGTGGTaGCACCCTGGGACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTRGPGW*HPGTSP
Trigger: TGGGCTGGTCCCAGGGTGGCACCACCCAGGCCCCCT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCGTGGTGACTGGGGCTaGCCTGCGCTCCACCCCTGT +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSRGDWG*PALHPC
Trigger: ACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTTAGGGGCCCGTCAGTaGCCACTCTTAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRELGARQ*PLLTQP
Trigger: AGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTTTAGGGGCCCGTCAGTaGCCACTCTTAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFLGARQ*PLLTQP
Trigger: AGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATCACATCCCTATCTATaGCAAATCGTCATGTCACAT +
Preference number: 4 (lower is better)
Translates to: ETARGDWGCPALHPCAHSSHPYL*QIVMSH
Trigger: ATGTGACATGACGATTTGGCATAGATAGGGATGTGA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATACCACACTCTGCTTTTaGTTGGCCTGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHTTLCF*LAWAVS
Trigger: TGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGT...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCAGGGGCCAGGTCTCTaGTTGAGAAAGGGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQQGPGL*LRKGLL
Trigger: TAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTTTTGAGGGATCCTGCTaGACCTGGCTCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSFEGSC*TWLPTS
Trigger: AGAGGTAGGGAGCCAGGTGCAGCAGGATCCCTCAAA...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGCTCACGGTGATGACTaGCAGAGAGGTGGCACTAAG +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGAHGDD*QRGGTK
Trigger: CTTAGTGCCACCTCTCTGCCAGTCATCACCGTGAGC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTACGATGGCGCTTCTTaGCTTTGTCCTGGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREYDGAS*LCPGDP
Trigger: AGGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATGGAGTGTCCTTCTTCCACAGACAGGCTAGAGGCAAAGGTGGGTTCCCCGCCTAAGCTACGGTTACGATaGCGCTTCTTGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: MECPSSTDRLEAKVGSPPKLRLR*RFLALS
Trigger: GGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTT...AGGCGGGGAACCCACCTTTGCCTCTAGCCTGTCTGTGGAAGAAGGACACTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGGACGATGGGAGTTCTaGAAGCTATGCCAACGGAGC +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFGRWEF*KLCQRS
Trigger: GCTCCGTTGGCATAGCTTCCAGAACTCCCATCGTCC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGGACGATGGGAGTTCTaGAAGCTATGCCAACGGAGC +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSGRWEF*KLCQRS
Trigger: GCTCCGTTGGCATAGCTTCCAGAACTCCCATCGTCC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCTGCAGGAGGTTGATCTaGCCTGCAAACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGCRRLI*PANCRL
Trigger: CAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCA...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTCTGTCCCCGGTAATCTaGGGTCTTGTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPLSPVI*GLVPPH
Trigger: ATGAGGAGGAACAAGACCCCAGATTACCGGGGACAG...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACCCGTGCGCTGCACGTaGATGAGGGGTGGCACCCCA +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTPVRCT*MRGGTP
Trigger: TGGGGTGCCACCCCTCATCCACGTGCAGCGCACGGG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTTTGCCTGCTGTCATCTaGTTTTCCTCGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPLPAVI*FSSAEA
Trigger: TGCCTCTGCCGAGGAAAACCAGATGACAGCAGGCAA...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp ATCACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCGGCTCCATGAGGTACTaGGATGTGAGCATGAGGGCT +
Preference number: 4 (lower is better)
Translates to: ITQQVLDILFHVEAQAYPGSMRY*DVSMRA
Trigger: AGCCCTCATGCTCACATCCCAGTACCTCATGGAGCC...GGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCAAGCAGGTGGCTGGTaGCAGCAGTCTTGCTACTCA +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREQAGGW*QQSCYS
Trigger: TGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCTCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGSQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCCTTGCCCTCTCAGTCTaGCAGAGAGCTGGGATCACA +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGLALSV*QRAGIT
Trigger: TGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAG...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTCAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPQDPMG*SIKCET
Trigger: GGTTTCACACTTTATCGACCACCCCATGGGGTCCTG...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCCACTCTGCTTTTGCTTaGCCTGGGCAGTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGHSAFA*PGQCQC
Trigger: GCACTGACACTGCCCAGGCCAAGCAAAAGCAGAGTG...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACCCAGTGGCCTTTGAATaGCATTTGAATTTCCATGTG +
Preference number: 4 (lower is better)
Translates to: SMRARTPDSGTGCSGSRDPVAFE*HLNFHV
Trigger: CACATGGAAATTCAAATGCCATTCAAAGGCCACTGG...GTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCACTCACATGCTCTTTTaGCCTCGGCTTCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGTHMLF*PRLLEA
Trigger: GGCCTCCAGAAGCCGAGGCCAAAAGAGCATGTGAGT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374597.3
3UTR CAA 72 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACAC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDG*PSQSGRELGSH
Trigger: GTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.7
ENST00000523864.5
CDS-3UTR TCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGAGATTCAAGGTGCTTaGGGAAGCTACGGTTACGAT +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETEIQGA*GSYGYD
Trigger: ATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTACAACTGCGGAAAGATaGGGCTTTGGAGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPTTAER*GFGDLL
Trigger: GAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGT...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGGCCAGGTCTCTGCTTaGGAAAGGGGCTGTTATGTT +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSGQVSA*ERGCYV
Trigger: AACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGCTACTGATGGTACACTaGTCTTCCTCTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMLLMVH*SSSSES
Trigger: AGACTCAGAAGAGGAAGAGCAGTGTACCATCAGTAG...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCAGCACTTACTTTCCTaGTGGAAGGCCCAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREQHLLS*WKAQWL
Trigger: TAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCTG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACCTCAGAGATTCAAGGTaGTTGAGGAAGCTACGGTTA +
Preference number: 4 (lower is better)
Translates to: PLCRRLIWPANCRLISSDLRDSR*LRKLRL
Trigger: TAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAG...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTTGTAGCCCCCACACGTaGTGGAGGATGTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRCSPHT*WRMSSR
Trigger: CCTAGACGACATCCTCCAGCACGTGTGGGGGCTACA...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTAGGTCCCGGAAATACTaGTTTAGCAGGTCAGCCACG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFRSRKY*FSRSAT
Trigger: CGTGGCTGACCTGCTAAAGCAGTATTTCCGGGACCT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAGGTCCCGGAAATACTaGTTTAGCAGGTCAGCCACG +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQRSRKY*FSRSAT
Trigger: CGTGGCTGACCTGCTAAAGCAGTATTTCCGGGACCT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCAGTCACTGATCATGTaGGACAGGCCCTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRQSLIM*DRPWVA
Trigger: AGCCACCCAGGGCCTGTCGCACATGATCAGTGACTG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTTGAGGAAGCTAGCTGGGATCACACATTaGTGTCGACCTCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: WLPLFSFRLRDSRCLRKLAGITH*CRPLCP
Trigger: GGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGC...TAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCCCTCAAAAGCATCCTTaGAGCAAACAAGACGGCTTG +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPPQKHP*SKQDGL
Trigger: CAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGG...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCTGGGCAGTGTCAGTaGGTGGCCAAAGGCTACACA +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPGQCQ*VAKGYT
Trigger: TGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTACCACACTCTGCTTTTaGTTGGCCTGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFTTLCF*LAWAVS
Trigger: TGACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCCATTCTCATCTGAAGTaGCCCTCAGGCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGHSHLK*PSGLPD
Trigger: GTCTGGAAGGCCTGAGGGGCACTTCAGATGAGAATG...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTACTCACATGCTCTTTTaGCCTCGGCTTCAGCGTTCT +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPTHMLF*PRLQRS
Trigger: AGAACGCTGAAGCCGAGGCCAAAAGAGCATGTGAGT...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGACCTTCTCTGAGGTaGCTGGACTATGCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGRPSLR*LDYAWA
Trigger: AGCCCAAGCATAGTCCAGCCACCTCAGAGAAGGTCT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCCATTACAGGCTCAGCTaGGTACAGCTCAGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: ELVDLEESGGELAGEDGLHYRLS*VQLRQV
Trigger: AACTTGCCTGAGCTGTACCCAGCTGAGCCTGTAATG...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACGGAGCCAGGACTGCTaGCTGGACTTCAGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTRSQDC*LDFSLG
Trigger: GCCCAGGCTGAAGTCCAGCCAGCAGTCCTGGCTCCG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCTGTCCCCGGTAATCTaGGGTCTTGTTCCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFLSPVI*GLVPPH
Trigger: ATGAGGAGGAACAAGACCCCAGATTACCGGGGACAG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTTGCGCAAGTAGCGCATaGCTTGCTGAATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFCASSA*LAECSV
Trigger: CACAGAGCATTCAGCAAGCCATGCGCTACTTGCGCA...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCCAACCACTGATCCTTaGGGAGGAGCTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFPTTDP*GGAGRS
Trigger: AGATCTACCAGCTCCTCCCCAAGGATCAGTGGTTGG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTGCAGCACCATGTCCTaGGGCACCTGGAAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQCSTMS*GTWKSF
Trigger: GAAACTTTTCCAGGTGCCCCAGGACATGGTGCTGCA...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACGTGTGCTGGGGCCCTaGCACGCTCATCCAGCCCTT +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTRVLGP*HAHPAL
Trigger: AAGGGCTGGATGAGCGTGCCAGGGCCCCAGCACACG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTCTTTGCCACTTCCATaGCACACAGGTGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: AWPKATQDPMGWSIKCETSLPLP*HTGVQR
Trigger: TCTTTGGACACCTGTGTGCCATGGAAGTGGCAAAGA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCGCTGCCTGCAGGGTaGGGAAGGAGTCCCGGATCT +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPLPAG*GRSPGS
Trigger: AGATCCGGGACTCCTTCCCCACCCTGCAGGCAGCGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFQDPMG*SIKCET
Trigger: GGTTTCACACTTTATCGACCACCCCATGGGGTCCTG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAAGATGGCTGGCCAGTaGGACAGAACAGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGKMAGQ*DRTGLA
Trigger: AGCCAAACCTGTTCTGTCCCACTGGCCAGCCATCTT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGAATTACAGTGGTGGTTaGGACCCATCTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LAESWDHTLLSTSLPLQANYSGG*DPSHFS
Trigger: ACTGAAATGAGATGGGTCCCAACCACCACTGTAATT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp TTTGCCACTTCCATGGCACACAGGTGTCCAAAGACTTaGTTGTACCAGTCAGGAGAACGGCCCCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FATSMAHRCPKT*LYQSGERPLRS
Trigger: TGACCTCAGGGGCCGTTCTCCTGACTGGTACAACAAAGTCTTTGGACACCTGTGTGCCATGGAAGTGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTTTTGGAGACCTTCTCTaGGGTGGCTGGACTATGCTT +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFFGDLL*GGWTML
Trigger: AAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAA...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGACAACTGCGGAAAGATaGGGCTTTGGAGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQTTAER*GFGDLL
Trigger: GAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTACAACTGCGGAAAGATaGGGCTTTGGAGACCTTCTC +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFTTAER*GFGDLL
Trigger: GAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCATGAACTTGGGCATTaGCCAGACCCAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRHELGH*PDPALL
Trigger: AAGCAGGGCTGGGTCTGGTCAATGCCCAAGTTCATG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGAGGTCTCATTCATTTaGCGCAGGTTCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREEVSFI*RRFWIL
Trigger: CAGGATCCAGAACCTGCGTCAAATGAATGAGACCTC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGAGGTCTCATTCATTTaGCGCAGGTTCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFEVSFI*RRFWIL
Trigger: CAGGATCCAGAACCTGCGTCAAATGAATGAGACCTC...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGCTGCTGCCAACCACTaGTCCTTGGGGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTAAANH*SLGRSW
Trigger: CCAGCTCCTCCCCAAGGATCAGTGGTTGGCAGCAGC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTGGCATCTCGAGACTTaGGAAAGGAAGGTACTCCAC +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREWHLET*ERKVLH
Trigger: GTGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCTCTCCATTCTCATCTaGAGTGCCCCTCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRLSILI*SAPQAF
Trigger: GAAGGCCTGAGGGGCACTTCAGATGAGAATGGAGAG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCCTACTGATGGTACACTaGTCTTCCTCTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPLLMVH*SSSSES
Trigger: AGACTCAGAAGAGGAAGAGCAGTGTACCATCAGTAG...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGAGTATTGGCACCACTaGCACCGGCTGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTEYWHH*HRLRWR
Trigger: CCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGGAGTCCCGGATCTTTaGCACTTCCATGGCACACAG +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRGVPDL*HFHGTQ
Trigger: CTGTGTGCCATGGAAGTGGCAAAGATCCGGGACTCC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCCCTCGCTCCCTTGGTaGCCAGGGGGCCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICPSLPW*PGGLGG
Trigger: ACCACCCAGGCCCCCTGGGCACCAAGGGAGCGAGGG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTTTAGGGGCCCGTCAGTaGCCACTCTTAACTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRLGARQ*PLLTQP
Trigger: AGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCTCTTAACCACACTCTaGTTTTGCTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRELLTTL*FCLAWA
Trigger: TGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTTTTGAGGGATCCTGCTaGACCTGGCTCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRFEGSC*TWLPTS
Trigger: AGAGGTAGGGAGCCAGGTGCAGCAGGATCCCTCAAA...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGCCGGTCACTCGAGCTaGGGGCACGGCCTGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNAGHSS*GHGLAR
Trigger: CCTTGCCAGGCCGTGCCCCCAGCTCGAGTGACCGGC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTGGTTCAGCCTCAGCTaGAGCCTGAGCCGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSWFSLS*SLSRSQ
Trigger: CTGGCTCCGGCTCAGGCTCCAGCTGAGGCTGAACCA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAATGCTCTGTGGCAGTaGCTGGCCCGTGCGCTGCAC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSNALWQ*LARALH
Trigger: GTGCAGCGCACGGGCCAGCCACTGCCACAGAGCATT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTCTTTGCCACTTCCATaGCACACAGGTGTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHSLPLP*HTGVQR
Trigger: TCTTTGGACACCTGTGTGCCATGGAAGTGGCAAAGA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGCAGGCGGGGAGCTGTaGAGGCTTCATGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSAGGEL*RLHAKW
Trigger: CCACTTGGCATGAAGCCTCCACAGCTCCCCGCCTGC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCATAGGCCCTTCCATCTaGCTGGCCCAGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSIGPSI*LAQGPG
Trigger: ACCTGGCCCCTGGGCCAGCCAGATGGAAGGGCCTAT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGAGATTCAAGGTGCTTaGGGAAGCTACGGTTACGAT +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREEIQGA*GSYGYD
Trigger: ATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATGCGCTGCACGTGGATaGGGGGTGGCACCCCAAATA +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTCAARG*GVAPQI
Trigger: TATTTGGGGTGCCACCCCTCATCCACGTGCAGCGCA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCCTGCAGCTTGGGCCTaGCGCAGCTCAGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNPAAWA*RSSARA
Trigger: AGCCCTGGCTGAGCTGCGTCAGGCCCAAGCTGCAGG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCCCGGCAGATGTGTGTaGGCCGAGAGCGGCCCAAGC +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNPGRCV*AESGPS
Trigger: GCTTGGGCCGCTCTCGGCTCACACACATCTGCCGGG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCCAGTCCAATTCCTCTaGAAAAGACACTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSPVQFL*KRHFRA
Trigger: GGCTCTGAAGTGTCTTTTTCAGAGGAATTGGACTGG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCCAGTCCAATTCCTCTaGAAAAGACACTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFPVQFL*KRHFRA
Trigger: GGCTCTGAAGTGTCTTTTTCAGAGGAATTGGACTGG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATGGTCCCCAGGAACGTaGACCAGGCAATCACCCCGG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTWSPGT*TRQSPR
Trigger: CCGGGGTGATTGCCTGGTGCACGTTCCTGGGGACCA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGACCAGACCCAGCCCTaGTTGTGGGGCACAGTGTAC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTDQTQP*LWGTVY
Trigger: GTACACTGTGCCCCACAAGCAGGGCTGGGTCTGGTC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTTCTTGGCTTTGTCCTaGGGACCCTCCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSFLALS*GPSWPW
Trigger: CCAGGGCCAGGAGGGTCCCCAGGACAAAGCCAAGAA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCAACCACTGATCCTTaGGGAGGAGCTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPTTDP*GGAGRS
Trigger: AGATCTACCAGCTCCTCCCCAAGGATCAGTGGTTGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTATGTCCTGGGGCACCTaGAAAAGTTTCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFMSWGT*KSFLQS
Trigger: TGACTGCAAGAAACTTTTCCAGGTGCCCCAGGACAT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGCCAGCTCCGTGTGCTaGGGCCCTGGCACGCTCATC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICASSVC*GPGTLI
Trigger: GATGAGCGTGCCAGGGCCCCAGCACACGGAGCTGGC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGGCCTCACAAGCAGGTaGCTGGTGGCAGCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSGLTSR*LVAAVL
Trigger: CAAGACTGCTGCCACCAGCCACCTGCTTGTGAGGCC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGCAAGTCAGGGAATACTaGTTTCACTGGCATCTCGAG +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREQVREY*FHWHLE
Trigger: CTCGAGATGCCAGTGAAACCAGTATTCCCTGACTTG...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTTCGTCCAGAAAACCGTaGTTTTTCTTCACAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPSSRKP*FFFTEP
Trigger: TGGCTCTGTGAAGAAAAACCACGGTTTTCTGGACGA...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR TCA 90 bp AAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTGGAGATTTGGAGACCTTCTCTaGGGTGGCTGGACTATGCTT +
Preference number: 4 (lower is better)
Translates to: KIQLRGSHDNCGKMRLWRFGDLL*GGWTML
Trigger: AAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAA...TCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGATCTCCAGCGACTCTaGGTTGAGGCTGGGACGATG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSDLQRL*VEAGTM
Trigger: CATCGTCCCAGCCTCAACTCAGAGTCGCTGGAGATC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGTGGTCGATAAAGTGTaGAACCCAAGTCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREVVDKV*NPSQGI
Trigger: TATTCCCTGACTTGGGTTTCACACTTTATCGACCAC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCTGGTAATGCTTTATTaGTTTGAGGGATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSLVMLY*FEGSCC
Trigger: GCAGCAGGATCCCTCAAATCAATAAAGCATTACCAG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTTTTGGGTTCGGGCGCTaGCACAGAGCGAGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICFGFGR*HRASGQ
Trigger: CTGCCCGCTCGCTCTGTGTCAGCGCCCGAACCCAAA...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR GCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCTCAGAGATTCAAGGTaGTTGAGGAAGCTACGGTTA +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQLRDSR*LRKLRL
Trigger: TAACCGTAGCTTCCTCAAGCACCTTGAATCTCTGAG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGCTCTGCTTGCTGGCTaGCACTCTTTTCCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSALLAG*HSFPSA
Trigger: GGCGGAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAGGGAGCGAGGGAATGTaGCTGGTTTGTGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTGSEGM*LVCGPQ
Trigger: CTGGGGACCACAAACCAGGCACATTCCCTCGCTCCC...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACACAGCTCTACTCGTTaGTGTAGCCCCCACACGTGC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTHSSTR*CSPHTC
Trigger: GCACGTGTGGGGGCTACAGCAACGAGTAGAGCTGTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACAGGCCCTGGGTGGCTaGCATGTTGTCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTQALGG*HVVTQV
Trigger: GACCTGAGTGACAACATGGCAGCCACCCAGGGCCTG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCAGTCACTGATCATGTaGGACAGGCCCTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSQSLIM*DRPWVA
Trigger: AGCCACCCAGGGCCTGTCGCACATGATCAGTGACTG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACAGTCACTGATCATGTaGGACAGGCCCTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTQSLIM*DRPWVA
Trigger: AGCCACCCAGGGCCTGTCGCACATGATCAGTGACTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCATAGCCGCAGGGGGTaGCCATCCGGTGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNHSRRG*PSGAFL
Trigger: CAGGAAGGCACCGGATGGGCACCCCCTGCGGCTATG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTTTCTCCCCTCTATGTaGAGAGGAGCTTTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREFLPSM*RGALGK
Trigger: CTTTCCTAAAGCTCCTCTGCACATAGAGGGGAGAAA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTCACATCCCTATCTATaGCAAATCGTCATGTCACAT +
Preference number: 4 (lower is better)
Translates to: IYTNETARGDWGCPALHPSHPYL*QIVMSH
Trigger: ATGTGACATGACGATTTGGCATAGATAGGGATGTGA...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCTGGGCAGTGTCAGTaGGTGGCCAAAGGCTACACA +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPGQCQ*VAKGYT
Trigger: TGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCGTCCAGCAGAGGCATaGTGGCGCGTGGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICRPAEA*WRVGSF
Trigger: GAAGCTCCCCACGCGCCACCATGCCTCTGCTGGACG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR CCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCTTTCTACTGATGAAGTaGCCTCCTCCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGFLLMK*PPPLPH
Trigger: ATGAGGAAGAGGAGGAGGCCACTTCATCAGTAGAAA...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACACGTGGATGAGGGGTaGCACCCCAAATACGTGCTG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTHVDEG*HPKYVL
Trigger: CAGCACGTATTTGGGGTGCCACCCCTCATCCACGTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGGCAGTGTCAGTGCGTaGCCAAAGGCTACACAGGAC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSGSVSA*PKATQD
Trigger: GTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGCCCTTCCATCTGGCTaGCCCAGGGGCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNALPSG*PRGQVS
Trigger: AGAGACCTGGCCCCTGGGCCAGCCAGATGGAAGGGC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
3UTR CAA 72 bp GGAACCTCCATCTGGCTGAGAGCCTCAGCTTGGCATTaGACCTCAACTGTGGCTATTTCTACTGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: GTSIWLRASAWH*TSTVAISTDEV
Trigger: CACTTCATCAGTAGAAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR TCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAGCACTTCACCTTCCTaGAGCAAGACCAGAAAACGT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRSTSPS*SKTRKR
Trigger: ACGTTTTCTGGTCTTGCTTCAGGAAGGTGAAGTGCT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATAGCCACGTCGTAGGCTaGCTGGCCCTCGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNSHVVG*LALVAD
Trigger: GTCTGCTACGAGGGCCAGTCAGCCTACGACGTGGCT...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TGGCTGCCACTCTTTTCCTTCCGCCTCAGAGATTCAAGGTGCTTGAGGAAGCTACTACTGATGGTACACTaGTCTTCCTCTTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: WLPLFSFRLRDSRCLRKLLLMVH*SSSSES
Trigger: AGACTCAGAAGAGGAAGAGCAGTGTACCATCAGTAG...TAGCTTCCTCAAGCACCTTGAATCTCTGAGGCGGAAGGAAAAGAGTGGCAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAGAGGTGGCTGGACTATaGTTGGGCTCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTEVAGL*LGSACW
Trigger: CCAGCAAGCAGAGCCCAAGCATAGTCCAGCCACCTC...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGAGTATTGGCACCACTaGCACCGGCTGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNEYWHH*HRLRWR
Trigger: CCGCCACCTCAGCCGGTGGCAGTGGTGCCAATACTC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGCAAGTTGTCATACGTaGTGGCATGGCTGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTASCHT*WHGCPL
Trigger: CAACGGGCAGCCATGCCAGCACGTATGACAACTTGC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATGTAGCCCCCACACGTaGTGGAGGATGTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTCSPHT*WRMSSR
Trigger: CCTAGACGACATCCTCCAGCACGTGTGGGGGCTACA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCATCTGGCCTGCAAACTaGCGGTTGATCTCCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSIWPAN*RLISSD
Trigger: GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGAT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGGGCGCCAGGCACACTaGCAGGTTGCCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICGRQAH*QVACCH
Trigger: ATGACAGCAGGCAACCTGGCAGTGTGCCTGGCGCCC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAAGGGGGAGTGGAGTTaGCTAAATTCTCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGKGEWS*LNSLFL
Trigger: GAGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAGCTGTGGAGGCTTCATaGCAAGTGGCGGCCTCACAA +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTAVEAS*QVAASQ
Trigger: TTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAGC...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCGCTCACGGTGATGACTaGCAGAGAGGTGGCACTAAG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSAHGDD*QRGGTK
Trigger: CTTAGTGCCACCTCTCTGCCAGTCATCACCGTGAGC...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATCATACGTGCTGGCATaGCTGCCCGTTGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTSYVLA*LPVEPQ
Trigger: CTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACTCTTCCTGTGCCACTaGTTCAGCCTCAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTLFLCH*FSLSWS
Trigger: GCTCCAGCTGAGGCTGAACCAGTGGCACAGGAAGAG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTSQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTCACAAGCAGGTGGCTaGTGGCAGCAGTCTTGCTAC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSSQAGG*WQQSCY
Trigger: GTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTGA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCCAGTGGCCTTTGAATaGCATTTGAATTTCCATGTG +
Preference number: 4 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFPVAFE*HLNFHV
Trigger: CACATGGAAATTCAAATGCCATTCAAAGGCCACTGG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAATTACAGTGGTGGTTaGGACCCATCTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQNYSGG*DPSHFS
Trigger: ACTGAAATGAGATGGGTCCCAACCACCACTGTAATT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGGTAAGCCGCAGCAGTaGGCCCTTGTGCAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICGKPQQ*ALVQEV
Trigger: AACCTCCTGCACAAGGGCTCACTGCTGCGGCTTACC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACAGCACTTACTTTCCTaGTGGAAGGCCCAGTGGCTA +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTQHLLS*WKAQWL
Trigger: TAGCCACTGGGCCTTCCAGCAGGAAAGTAAGTGCTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGGTCCAGGCACTGGCTaGGCAAGTAGCGCATGGCTT +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICGPGTG*ASSAWL
Trigger: AAGCCATGCGCTACTTGCGCAGCCAGTGCCTGGACC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATTTCTTGGCTTTGTCCTaGGGACCCTCCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNFLALS*GPSWPW
Trigger: CCAGGGCCAGGAGGGTCCCCAGGACAAAGCCAAGAA...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATTGGGCTCTGCTTGCTaGCTGCCACTCTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTLGSAC*LPLFSF
Trigger: GAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTTGGGCTCTGCTTGCTaGCTGCCACTCTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSLGSAC*LPLFSF
Trigger: GAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAGTTGTCATACGTGCTaGCATGGCTGCCCGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTSCHTC*HGCPLS
Trigger: GCTCAACGGGCAGCCATGCCAGCACGTATGACAACT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGCCGGAACCTCCATCTaGCTGAGAGCCTCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICAGTSI*LRASAW
Trigger: CCAAGCTGAGGCTCTCAGCCAGATGGAGGTTCCGGC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTGCGCAAGTAGCGCATaGCTTGCTGAATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSCASSA*LAECSV
Trigger: CACAGAGCATTCAGCAAGCCATGCGCTACTTGCGCA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCAACCACTGATCCTTaGGGAGGAGCTGGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPTTDP*GGAGRS
Trigger: AGATCTACCAGCTCCTCCCCAAGGATCAGTGGTTGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATTAGAGACATTGAGGTaGAAGATGGAGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTLETLR*KMEGAR
Trigger: CCTGGCGCCCTCCATCTTCCACCTCAATGTCTCTAA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACAAGCAGGTGGCTGGTaGCAGCAGTCTTGCTACTCA +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTQAGGW*QQSCYS
Trigger: TGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGCGTTCTTCTTCACCTaGAGCAATGGGAAGCACTTC +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTAFFFT*SNGKHF
Trigger: GAAGTGCTTCCCATTGCTGCAGGTGAAGAAGAACGC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR GCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTTGAAGCCACTCACATaGTCTTTTGGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSLKPLT*SFGLGF
Trigger: GAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTAGTCTTCATTCTGCTTaGTTTGAAAATGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: HKQVAGGSSLATHAILFSSLHSA*FENEPP
Trigger: TGGAGGTTCATTTTCAAAGCAAGCAGAATGAAGACT...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGCTCTGCTTGCTGGCTaGCACTCTTTTCCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICALLAG*HSFPSA
Trigger: GGCGGAAGGAAAAGAGTGGCAGCCAGCAAGCAGAGC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGAGGTGGCTGGACTATaGTTGGGCTCTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNEVAGL*LGSACW
Trigger: CCAGCAAGCAGAGCCCAAGCATAGTCCAGCCACCTC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACTAGGTGAGCATAGCTaGCCCCACTCTCCTCATCAT +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTLGEHS*PHSPHH
Trigger: ATGATGAGGAGAGTGGGGGCAGCTATGCTCACCTAG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACAGACTTGCGGAAGATaGCTACTTGGTCCAGGCACT +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTQTCGR*LLGPGT
Trigger: AGTGCCTGGACCAAGTAGGCATCTTCCGCAAGTCTG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTTCATACGTGCTGGCATaGCTGCCCGTTGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICSYVLA*LPVEPQ
Trigger: CTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGA...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCCAGGTCTGGGTACATaGCCCGAGACCACAGCTCTA +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNPGLGT*PETTAL
Trigger: TAGAGCTGTGGTCTCGGGCCATGTACCCAGACCTGG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATTAGAGACATTGAGGTaGAAGATGGAGGGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTLETLR*KMEGAR
Trigger: CCTGGCGCCCTCCATCTTCCACCTCAATGTCTCTAA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGGGGTGAAGGGGGAGTaGAGTTGCCTAAATTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTGVKGE*SCLNSL
Trigger: AAGAGAATTTAGGCAACTCCACTCCCCCTTCACCCC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATAGGCTTCATGCCAAGTaGCGGCCTCACAAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNRLHAK*RPHKQV
Trigger: CACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCT...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAAGATGGCTGGCCAGTaGGACAGAACAGGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTKMAGQ*DRTGLA
Trigger: AGCCAAACCTGTTCTGTCCCACTGGCCAGCCATCTT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAATTACAGTGGTGGTTaGGACCCATCTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRNYSGG*DPSHFS
Trigger: ACTGAAATGAGATGGGTCCCAACCACCACTGTAATT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGAGATTCAAGGTGCTTaGGGAAGCTACGGTTACGAT +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTEIQGA*GSYGYD
Trigger: ATCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATTTGGAGACCTTCTCTaGGGTGGCTGGACTATGCTT +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTFGDLL*GGWTML
Trigger: AAGCATAGTCCAGCCACCTCAGAGAAGGTCTCCAAA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCTCAGCTTGGCATTTaGCCTCAACTGTGGCTATTT +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPQLGI*PQLWLF
Trigger: AAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCTGCAAACTGCCGGTTaGTCTCCAGCGACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNLQTAG*SPATLS
Trigger: ACTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCATGAACTTGGGCATTaGCCAGACCCAGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNHELGH*PDPALL
Trigger: AAGCAGGGCTGGGTCTGGTCAATGCCCAAGTTCATG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATTCTGGATCCTGGACTTaGCCCCAGACTTGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNSGSWT*PQTCGR
Trigger: TCTTCCGCAAGTCTGGGGTCAAGTCCAGGATCCAGA...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAGAGGTCTCATTCATTTaGCGCAGGTTCTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTEVSFI*RRFWIL
Trigger: CAGGATCCAGAACCTGCGTCAAATGAATGAGACCTC...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATGGCATCTCGAGACTTaGGAAAGGAAGGTACTCCAC +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTWHLET*ERKVLH
Trigger: GTGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTTGCTTGGGCTCTGCTTaGTGGCTGCCACTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICCLGSA*WLPLFS
Trigger: GGAAAAGAGTGGCAGCCAGCAAGCAGAGCCCAAGCA...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCCTCAGCCTCATTCATaGAGTTCCCACTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSPQPHS*SSHYCQ
Trigger: TTGACAGTAGTGGGAACTCCATGAATGAGGCTGAGG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTTGCAGGAGGTTGATCTaGCCTGCAAACTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICCRRLI*PANCRL
Trigger: CAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCA...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCATGTCCTGGGGCACCTaGAAAAGTTTCTTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSMSWGT*KSFLQS
Trigger: TGACTGCAAGAAACTTTTCCAGGTGCCCCAGGACAT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAGCACTTCACCTTCCTaGAGCAAGACCAGAAAACGT +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTSTSPS*SKTRKR
Trigger: ACGTTTTCTGGTCTTGCTTCAGGAAGGTGAAGTGCT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR TCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAAATGCTTTATTGATTTaGGGGATCCTGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTNALLI*GILLHL
Trigger: CAGGTGCAGCAGGATCCCTCAAATCAATAAAGCATT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCTGGTAATGCTTTATTaGTTTGAGGGATCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSLVMLY*FEGSCC
Trigger: GCAGCAGGATCCCTCAAATCAATAAAGCATTACCAG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTAGTCTTCATTCTGCTTaGTTTGAAAATGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRSLHSA*FENEPP
Trigger: TGGAGGTTCATTTTCAAAGCAAGCAGAATGAAGACT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGAGGTTGATCTGGCCTaGAAACTGCCGGTTGATCTC +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNEVDLA*KLPVDL
Trigger: GAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCATTCTCATCTGAAGTaGCCCTCAGGCCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICHSHLK*PSGLPD
Trigger: GTCTGGAAGGCCTGAGGGGCACTTCAGATGAGAATG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATTTCTACTGATGAAGTaGCCTCCTCCTCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTFLLMK*PPPLPH
Trigger: ATGAGGAAGAGGAGGAGGCCACTTCATCAGTAGAAA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCAGGACCCCATGGGGTaGTCGATAAAGTGTGAAACC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICQDPMG*SIKCET
Trigger: GGTTTCACACTTTATCGACCACCCCATGGGGTCCTG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCTGAGGGAATCCTGTTaGTTGAAGCCACTCACATGC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICLRESC*LKPLTC
Trigger: GCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCTCTTAACCACACTCTaGTTTTGCTTGGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICLLTTL*FCLAWA
Trigger: TGCCCAGGCCAAGCAAAAGCAGAGTGTGGTTAAGAG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTAAGCTACGGTTACGATaGCGCTTCTTGGCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICKLRLR*RFLALS
Trigger: GGACAAAGCCAAGAAGCGCCATCGTAACCGTAGCTT...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCTGAGAGCCTCAGCTTaGCATTTGACCTCAACTGTG +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICLRASA*HLTSTV
Trigger: CACAGTTGAGGTCAAATGCCAAGCTGAGGCTCTCAG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATCCTCAGCTTGGCATTTaGCCTCAACTGTGGCTATTT +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNPQLGI*PQLWLF
Trigger: AAATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGG...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGTGGTCGATAAAGTGTaGAACCCAAGTCAGGGAATA +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICVVDKV*NPSQGI
Trigger: TATTCCCTGACTTGGGTTTCACACTTTATCGACCAC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTAGCACCAGTGGCCTTTaGATGGCATTTGAATTTCCA +
Preference number: 4 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICSTSGL*MAFEFP
Trigger: TGGAAATTCAAATGCCATTCAAAGGCCACTGGTGCT...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR TCA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATAATGCTTTATTGATTTaGGGGATCCTGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNNALLI*GILLHL
Trigger: CAGGTGCAGCAGGATCCCTCAAATCAATAAAGCATT...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR GCA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATCACATCCCTATCTATaGCAAATCGTCATGTCACAT +
Preference number: 4 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTSHPYL*QIVMSH
Trigger: ATGTGACATGACGATTTGGCATAGATAGGGATGTGA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AGCATGAGGGCTCGCACACCCGACTCTGGCACAGGTTGTTCCGGATCCAGGGACTTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SMRARTPDSGTGCSGSRDFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...GTCCCTGGATCCGGAACAACCTGTGCCAGAGTCGGGTGTGCGAGCCCTCATGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCTCACAGTCCAGCGACTCTGAGTaGAGGCTGGGACGATGGGAG +
Preference number: 5 (lower is better)
Translates to: YVLAWLPVEPQEPRRPSQSSDSE*RLGRWE
Trigger: CTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGA...CTGTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGCCGCGTCCACCCCTTaGGGTTCGGGCGCTGACACA +
Preference number: 5 (lower is better)
Translates to: ETARGDWGCPALHPCAHSAASTP*GSGADT
Trigger: TGTGTCAGCGCCCGAACCCAAAGGGGTGGACGCGGC...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR CAA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCTGGCGCTTCTTGGCTTaGTCCTGGGGACCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQAWRFLA*SWGPSW
Trigger: CCAGGAGGGTCCCCAGGACAAAGCCAAGAAGCGCCA...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CTCATCCCAGAGGGCCCGCTCCCGGAGAACACGATGCAGCACCACAGCTGGGGGGTGGCTGGACTATGCTaGGGCTCTGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LIPEGPLPENTMQHHSWGVAGLC*GSACWL
Trigger: CAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCAC...CCCCCAGCTGTGGTGCTGCATCGTGTTCTCCGGGAGCGGGCCCTCTGGGATGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGTGGCATGGCTGCCCGTaGAGCCACAGGAGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAWHGCP*SHRSPG
Trigger: GCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCA...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCGCTTACCCCTGCAGCTaGGGCCTGACGCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSAYPCS*GLTQLS
Trigger: GCTGAGCTGCGTCAGGCCCAAGCTGCAGGGGTAAGC...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGACGCTCTCACAGCTaGAGGTCGCTGGCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGGRSHS*RSLAGQ
Trigger: CTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTCC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATGGCGCTTCTTGGCTTaGTCCTGGGGACCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ETARGDWGCPALHPCAHSWRFLA*SWGPSW
Trigger: CCAGGAGGGTCCCCAGGACAAAGCCAAGAAGCGCCA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GACTGGGAGACAAGCAGGCAACCCCCACGAGGCAGGTCAGAGCGCCACATCCGAGCGGAAGATGCCTACTaGGTCCAGGCACTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: DWETSRQPPRGRSERHIRAEDAY*VQALAA
Trigger: CGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCGC...TCGGATGTGGCGCTCTGACCTGCCTCGTGGGGGTTGCCTGCTTGTCTCCCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCAGGCTGCGTTTGCTCTaGATCCTGGGAGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPRLRLL*ILGEGL
Trigger: TAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCCT...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CCAGGCAATCACCCCGGTGTGTCCACTGAGGATGCCGGAACGAGGCCACAGGCCACTTCAGAGCCAGCGTaGGCCCCAAAGGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: PGNHPGVSTEDAGTRPQATSEPA*APKAGP
Trigger: TGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAGT...GGCCTGTGGCCTCGTTCCGGCATCCTCAGTGGACACACCGGGGTGATTGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCTCACAGAACCACACTCTGCTTTaGCTTGGCCTGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: YVLAWLPVEPQEPRRPSQNHTLL*LGLGSV
Trigger: GACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTT...CTGTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGTCATACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCCACTCACATGCTCTTTaGGCCTCGGCTTCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: LSYVLAWLPVEPQEPRRPHSHAL*ASASAF
Trigger: GAACGCTGAAGCCGAGGCCAAAAGAGCATGTGAGTG...GGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTATGACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGGACGCTCTCACAGCTaGAGGTCGCTGGCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAGRSHS*RSLAGQ
Trigger: CTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTCC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TACGTGCTGGCATGGCTGCCCGTTGAGCCACAGGAGCCCCGGCGCCCCTCACAGCGGAAAGATGAGGCTTaGGAGACCTTCTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: YVLAWLPVEPQEPRRPSQRKDEA*ETFSEV
Trigger: CACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCG...CTGTGAGGGGCGCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCAGCACGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCAGGCCTTCCGAGTATaGGCACCACTGCCACCGGCT +
Preference number: 5 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGQAFRV*APLPPA
Trigger: AGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCTCCAGCGACTCTGAGTaGAGGCTGGGACGATGGGAG +
Preference number: 5 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSSSDSE*RLGRWE
Trigger: CTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGA...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGCCACCTCTGTGGATGCCTTCCATAGCCGCAGGGGGTGCCCATCCGGTGCCTCCCTTGTGCAGGAGGTaGATCTGGCCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: LPPLWMPSIAAGGAHPVPPLCRR*IWPANC
Trigger: GCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG...AGGCACCGGATGGGCACCCCCTGCGGCTATGGAAGGCATCCACAGAGGTGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGCGGAAGATGCCTACTaGGTCCAGGCACTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGAEDAY*VQALAA
Trigger: CGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCGC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCATGGGTGGCTGCCATGTaGTCACTCAGGTCCCTAGGG +
Preference number: 5 (lower is better)
Translates to: ETARGDWGCPALHPCAHSWVAAM*SLRSLG
Trigger: CCCTAGGGACCTGAGTGACAACATGGCAGCCACCCA...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GGGGCACGGCCTGGCAAGGGCAAGTCTGCTGGCTCGGGTGGTAGGCTCACGGTGAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 5 (lower is better)
Translates to: GARPGKGKSAGSGGRLTVRPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...CACCGTGAGCCTACCACCCGAGCCAGCAGACTTGCCCTTGCCAGGCCGTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCCTGCAAACTGCCGGTaGATCTCCAGCGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSPANCR*ISSDSE
Trigger: CTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAGACCCAGCCCTGCTaGTGGGGCACAGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIQTQPC*WGTVYF
Trigger: GAAGTACACTGTGCCCCACAAGCAGGGCTGGGTCTG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCCACTCACATGCTCTTTaGGCCTCGGCTTCTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSHSHAL*ASASGG
Trigger: GCCTCCAGAAGCCGAGGCCAAAAGAGCATGTGAGTG...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTGGGAATGTGCCTGGTTaGTGGTCCCCAGGAACGTGC +
Preference number: 5 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAGNVPG*WSPGTC
Trigger: GCACGTTCCTGGGGACCACAAACCAGGCACATTCCC...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGTGGCATGGCTGCCCGTaGAGCCACAGGAGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREWHGCP*SHRSPG
Trigger: GCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCA...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTGGCATGGCTGCCCGTaGAGCCACAGGAGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQWHGCP*SHRSPG
Trigger: GCCGGGGCTCCTGTGGCTCAACGGGCAGCCATGCCA...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAACCTGCAAACTGCCGGTaGATCTCCAGCGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQPANCR*ISSDSE
Trigger: CTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGG...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCAGGCTGCGTTTGCTCTaGATCCTGGGAGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGRLRLL*ILGEGL
Trigger: TAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCCT...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: ETARGDWGCPALHPCAHSSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAAACCACACTCTGCTTTaGCTTGGCCTGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ETARGDWGCPALHPCAHSNHTLL*LGLGSV
Trigger: GACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTT...TGAATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGTTACGATGGCGCTTCTaGGCTTTGTCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQALRWRF*ALSWGP
Trigger: GGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTAA...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGGTGGCTGGACTATGCTaGGGCTCTGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMVAGLC*GSACWL
Trigger: CAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCAC...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTCCAGCGACTCTGAGTaGAGGCTGGGACGATGGGAG +
Preference number: 5 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMSSDSE*RLGRWE
Trigger: CTCCCATCGTCCCAGCCTCAACTCAGAGTCGCTGGA...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTCAAGTAGCGCATGGCTaGCTGAATGCTCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: MKQLVVTGAALRSTPVPIQVAHG*LNALWQ
Trigger: CTGCCACAGAGCATTCAGCAAGCCATGCGCTACTTG...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCAGCAAGGTGGCGGCTaGTGCTGCTGCCAACCACTG +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETQQGGG*CCCQPL
Trigger: CAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ACAGTGTACTTCTCCATGAACGCGGTAAGCCGCAGCAGTGAGCCCTTGTGCAGGCCAAGGCTCACAGCTTaGTCTCAGGGCCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: TVYFSMNAVSRSSEPLCRPRLTA*SQGPLP
Trigger: AGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGG...CCTGCACAAGGGCTCACTGCTGCGGCTTACCGCGTTCATGGAGAAGTACACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp ATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCTGTGCCCATTAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: MKQLVVTGAALRSTPVPISKQDG*PSQSGR
Trigger: TCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCT...AATGGGCACAGGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTCGGAAAGATGAGGCTTaGGAGACCTTCTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGRKDEA*ETFSEV
Trigger: CACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCG...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTCCTCCTCATGAACTaGGGCATTGACCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: DHTLLSTSLPLQAGSCGGFLLMN*GIDQTQ
Trigger: CTGGGTCTGGTCAATGCCCAAGTTCATGAGGAGGAA...GCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGACTTGACCCCAGACTaGCGGAAGATGCCTACTTGG +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQADLTPD*RKMPTW
Trigger: CCAAGTAGGCATCTTCCGCAAGTCTGGGGTCAAGTC...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCGCTTACCCCTGCAGCTaGGGCCTGACGCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGAYPCS*GLTQLS
Trigger: GCTGAGCTGCGTCAGGCCCAAGCTGCAGGGGTAAGC...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTTTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: HKQVAGGSSLATHAILFSLLSTS*PLQAGS
Trigger: GCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAA...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTTTGCTGTCGACCTCTTaGCCCCTGCAGGCGGGGAGC +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFLLSTS*PLQAGS
Trigger: GCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAA...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGTACAGCTCAGGCAAGTaGTCATACGTGCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAYSSGK*SYVLAW
Trigger: CCATGCCAGCACGTATGACAACTTGCCTGAGCTGTA...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCCCTTGTGCAGGAGGTaGATCTGGCCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETPLCRR*IWPANC
Trigger: GCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTTTCCTCCTCATGAACTaGGGCATTGACCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEAFLLMN*GIDQTQ
Trigger: CTGGGTCTGGTCAATGCCCAAGTTCATGAGGAGGAA...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGCGGAAGATGCCTACTaGGTCCAGGCACTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: HKQVAGGSSLATHAILFSAEDAY*VQALAA
Trigger: CGCAGCCAGTGCCTGGACCAAGTAGGCATCTTCCGC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACGACTTGACCCCAGACTaGCGGAAGATGCCTACTTGG +
Preference number: 5 (lower is better)
Translates to: PLCRRLIWPANCRLISSDDLTPD*RKMPTW
Trigger: CCAAGTAGGCATCTTCCGCAAGTCTGGGGTCAAGTC...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CACCTCTCGGTTCTCATCGGGGAGCAGCAAGGTGGCGGCTTGTGCTGCTGCCAACGAGGTCTCATTCATTaGACGCAGGTTCTGGATCCT +
Preference number: 5 (lower is better)
Translates to: HLSVLIGEQQGGGLCCCQRGLIH*TQVLDP
Trigger: AGGATCCAGAACCTGCGTCAAATGAATGAGACCTCG...TTGGCAGCAGCACAAGCCGCCACCTTGCTGCTCCCCGATGAGAACCGAGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGAAAGTGGTGGTGAGCTaGCTGGTGAAGATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQAKVVVS*LVKMGS
Trigger: TGAGCCCATCTTCACCAGCAAGCTCACCACCACTTT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGCCAATGAGGCTGCGTTaGCTCTTGATCCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMPMRLR*LLILGE
Trigger: CTCTCCCAGGATCAAGAGCAAACGCAGCCTCATTGG...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCGGCAGATGTGTGTGAGCCGAGAGCGGCCCAAGCCGCAAGGCTCCATGAGGTATGTCCAAAGACTTTGTaGTACCAGTCAGGAGAACGG +
Preference number: 5 (lower is better)
Translates to: PADVCEPRAAQAARLHEVCPKTL*YQSGER
Trigger: CCGTTCTCCTGACTGGTACAACAAAGTCTTTGGACA...TACCTCATGGAGCCTTGCGGCTTGGGCCGCTCTCGGCTCACACACATCTGCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACAGGAGTCCCGGATCTTaGCCACTTCCATGGCACACA +
Preference number: 5 (lower is better)
Translates to: PLCRRLIWPANCRLISSDRSPGS*PLPWHT
Trigger: TGTGTGCCATGGAAGTGGCAAAGATCCGGGACTCCT...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTCCAAGGCTCACAGCTTaGTCTCAGGGCCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: HKQVAGGSSLATHAILFSPRLTA*SQGPLP
Trigger: AGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGG...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCTTGTGCAGGAGGTTGATCTGGCCTGCAAACTGCCGGTTGATCTCCAGCGACAGCTGGGATCACACATaGCTGTCGACCTCTTTGCCC +
Preference number: 5 (lower is better)
Translates to: PLCRRLIWPANCRLISSDSWDHT*LSTSLP
Trigger: GGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCT...GTCGCTGGAGATCAACCGGCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CAGGCTCAGCTGGGTACAGCTCAGGCAAGTTGTCATACGTGCTGGCATGGCTGCAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: QAQLGTAQASCHTCWHGCSKQDG*PSQSGR
Trigger: TCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCT...GCAGCCATGCCAGCACGTATGACAACTTGCCTGAGCTGTACCCAGCTGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp ATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGGGGAGCTGTGGAGGCTACTGAGGGAATCCTGTaGCTTGAAGCCACTCACATG +
Preference number: 5 (lower is better)
Translates to: ITHCCRPLCPCRRGAVEATEGIL*LEATHM
Trigger: CATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGT...AGCCTCCACAGCTCCCCGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGGGAATGTGCCTGGTTaGTGGTCCCCAGGAACGTGC +
Preference number: 5 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREGNVPG*WSPGTC
Trigger: GCACGTTCCTGGGGACCACAAACCAGGCACATTCCC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTCCCTTGTGCAGGAGGTaGATCTGGCCTGCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SQSGRELGSHIAVDLFAPPLCRR*IWPANC
Trigger: GCAGTTTGCAGGCCAGATCAACCTCCTGCACAAGGG...AGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCGCAGCAGTGAGCCCTaGTGCAGGAGGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFRSSEP*CRRLIW
Trigger: CCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGCGCAGCAGTGAGCCCTaGTGCAGGAGGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQRSSEP*CRRLIW
Trigger: CCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCG...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCCGCAGCAGTGAGCCCTaGTGCAGGAGGTTGATCTGG +
Preference number: 5 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGRSSEP*CRRLIW
Trigger: CCAGATCAACCTCCTGCACAAGGGCTCACTGCTGCG...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCTGGGTGGCTGCCATGTaGTCACTCAGGTCCCTAGGG +
Preference number: 5 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGWVAAM*SLRSLG
Trigger: CCCTAGGGACCTGAGTGACAACATGGCAGCCACCCA...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTGCTTACCCCTGCAGCTaGGGCCTGACGCAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRAYPCS*GLTQLS
Trigger: GCTGAGCTGCGTCAGGCCCAAGCTGCAGGGGTAAGC...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCTGACGCTCATCCAGCCCTaGAAGCGCTCAGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: HAAGPGYSLPCRGSGLPLTLIQP*KRSAAS
Trigger: TGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGT...CAGGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTTCCCCCTCGCTCCCTaGGTGCCCAGGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSFPLAP*VPRGPG
Trigger: CCCAGGCCCCCTGGGCACCAAGGGAGCGAGGGGGAA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGTGGAGGCTTCATGCCAAGTGGCGGCCTCACAAGCAGGTGGCTGGTGGCAGCGAAGGGGGAGTGGAGTaGCCTAAATTCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LWRLHAKWRPHKQVAGGSEGGVE*PKFSFS
Trigger: AGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTTC...GCTGCCACCAGCCACCTGCTTGTGAGGCCGCCACTTGGCATGAAGCCTCCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTACTTCAGAGCCAGCGTaGGCCCCAAAGGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: HKQVAGGSSLATHAILFSTSEPA*APKAGP
Trigger: TGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAGT...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTACTTCAGAGCCAGCGTaGGCCCCAAAGGCAGGACCA +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFTSEPA*APKAGP
Trigger: TGGTCCTGCCTTTGGGGCCAACGCTGGCTCTGAAGT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCAACCACACTCTGCTTTaGCTTGGCCTGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: IYTNETARGDWGCPALHPNHTLL*LGLGSV
Trigger: GACACTGCCCAGGCCAAGCAAAAGCAGAGTGTGGTT...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGGGCCAGGTCTCTGCTaGAGAAAGGGGCTGTTATGT +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETGPGLC*RKGLLC
Trigger: ACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATCACTCACATGCTCTTTaGGCCTCGGCTTCAGCGTTC +
Preference number: 5 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHHSHAL*ASASAF
Trigger: GAACGCTGAAGCCGAGGCCAAAAGAGCATGTGAGTG...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGAGAGATTCAAGGTGCTaGAGGAAGCTACGGTTACGA +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQARDSRC*RKLRLR
Trigger: TCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCGGAAAGATGAGGCTTaGGAGACCTTCTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETRKDEA*ETFSEV
Trigger: CACCTCAGAGAAGGTCTCCAAAGCCTCATCTTTCCG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCAGGCCTTCCGAGTATaGGCACCACTGCCACCGGCT +
Preference number: 5 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRQAFRV*APLPPA
Trigger: AGCCGGTGGCAGTGGTGCCAATACTCGGAAGGCCTG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTACAGCTCAGGCAAGTaGTCATACGTGCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETYSSGK*SYVLAW
Trigger: CCATGCCAGCACGTATGACAACTTGCCTGAGCTGTA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TGCCATGCTGTCGGTGACATAGTGGTACAGCTCCACACCCGGCATCAGGGCTTCGCCTCAGCTTGGCATTaGACCTCAACTGTGGCTATT +
Preference number: 5 (lower is better)
Translates to: CHAVGDIVVQLHTRHQGFASAWH*TSTVAI
Trigger: AATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGC...GAAGCCCTGATGCCGGGTGTGGAGCTGTACCACTATGTCACCGACAGCATGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCCTGCAAACTGCCGGTaGATCTCCAGCGACTCTGAG +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFPANCR*ISSDSE
Trigger: CTCAGAGTCGCTGGAGATCAACCGGCAGTTTGCAGG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCCAAGTAGCGCATGGCTaGCTGAATGCTCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: ELVDLEESGGELAGEDGLQVAHG*LNALWQ
Trigger: CTGCCACAGAGCATTCAGCAAGCCATGCGCTACTTG...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGGCTGCGTTTGCTCTaGATCCTGGGAGAGGGGCTA +
Preference number: 5 (lower is better)
Translates to: QPQKHPCSKQDGLPSQSGRLRLL*ILGEGL
Trigger: TAGCCCCTCTCCCAGGATCAAGAGCAAACGCAGCCT...GCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCCAAGGCTCACAGCTTaGTCTCAGGGCCCGCTGCCT +
Preference number: 5 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRPRLTA*SQGPLP
Trigger: AGGCAGCGGGCCCTGAGACAAAGCTGTGAGCCTTGG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGAAGGGGGAGTGGAGTaGCCTAAATTCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGEGGVE*PKFSFS
Trigger: AGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTTC...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTGCCCCTGCAGGCGACCTCAAAAGCATCCTaGCAGCAAACAAGACGGCTT +
Preference number: 5 (lower is better)
Translates to: LAESWDHTLLSTSLPLQATSKAS*QQTRRL
Trigger: AAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGT...CGCCTGCAGGGGCAAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGGCCTGGGCAGTGTCAGTGCGTGGCCAAAGGCTACACAGGACCCCATGGGGTAAATTACAGTGGTGGTaGGGACCCATCTCATTTCAG +
Preference number: 5 (lower is better)
Translates to: LAWAVSVRGQRLHRTPWGKLQWW*GPISFQ
Trigger: CTGAAATGAGATGGGTCCCAACCACCACTGTAATTT...ACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGCACTGACACTGCCCAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETRPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTCCATCTGGCTGGCCCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGAGAGATTCAAGGTGCTaGAGGAAGCTACGGTTACGA +
Preference number: 5 (lower is better)
Translates to: FHLAGPGARSLLEKGAVMRDSRC*RKLRLR
Trigger: TCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCT...CATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGGGCCAGCCAGATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTCAGACCCAGCCCTGCTaGTGGGGCACAGTGTACTTC +
Preference number: 5 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRQTQPC*WGTVYF
Trigger: GAAGTACACTGTGCCCCACAAGCAGGGCTGGGTCTG...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGGACTTGACCCCAGACTaGCGGAAGATGCCTACTTGG +
Preference number: 5 (lower is better)
Translates to: QKHPCSKQDGLPSQSGREDLTPD*RKMPTW
Trigger: CCAAGTAGGCATCTTCCGCAAGTCTGGGGTCAAGTC...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCCGAGGTCTCATTCATTaGACGCAGGTTCTGGATCCT +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETRGLIH*TQVLDP
Trigger: AGGATCCAGAACCTGCGTCAAATGAATGAGACCTCG...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCCAATGAGGCTGCGTTaGCTCTTGATCCTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFPMRLR*LLILGE
Trigger: CTCTCCCAGGATCAAGAGCAAACGCAGCCTCATTGG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTAGCAAACAAGACGGCTaGCCCTCTCAGTCTGGCAGA +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFSKQDG*PSQSGR
Trigger: TCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCT...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCCTGGCATCTCGAGACTaGAGAAAGGAAGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: IYTNETARGDWGCPALHPLASRD*RKEGTP
Trigger: TGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCAG...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CACAAGCAGGTGGCTGGTGGCAGCAGTCTTGCTACTCATGCGATTCTCTTCTCTGGGCCAGGTCTCTGCTaGAGAAAGGGGCTGTTATGT +
Preference number: 5 (lower is better)
Translates to: HKQVAGGSSLATHAILFSGPGLC*RKGLLC
Trigger: ACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCC...AGAGAAGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAGCCACCTGCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATAGGCCTTCCAGACACTaGCCCCCACCAGAGATTATA +
Preference number: 5 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHRPSRH*PPPEII
Trigger: TATAATCTCTGGTGGGGGCAAGTGTCTGGAAGGCCT...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGGACGCTCTCACAGCTaGAGGTCGCTGGCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTGRSHS*RSLAGQ
Trigger: CTGGCCTGCCAGCGACCTCAAGCTGTGAGAGCGTCC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTAGGGGCCCGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTACGCTCATCCAGCCCTaGAAGCGCTCAGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: LGARQCPLLTQPHKIQHRTLIQP*KRSAAS
Trigger: TGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGT...ACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACGGGCCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATCACGCAGCAGGTCCTGGATATTCTCTTCCATGTAGAGGCTCAGGCTTACCCCCTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 5 (lower is better)
Translates to: ITQQVLDILFHVEAQAYPLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...GGGGTAAGCCTGAGCCTCTACATGGAAGAGAATATCCAGGACCTGCTGCGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp GAGCTGGTAGATCTGGAGGAAAGTGGTGGTGAGCTTGCTGGTGAAGATGGGCTCCTGGCATCTCGAGACTaGAGAAAGGAAGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: ELVDLEESGGELAGEDGLLASRD*RKEGTP
Trigger: TGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCAG...GAGCCCATCTTCACCAGCAAGCTCACCACCACTTTCCTCCAGATCTACCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp CAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGTCTGGCAGAGAGACTGAGGGAATCCTGTaGCTTGAAGCCACTCACATG +
Preference number: 5 (lower is better)
Translates to: QKHPCSKQDGLPSQSGRETEGIL*LEATHM
Trigger: CATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGT...CTCTCTGCCAGACTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATGGCGCTTCTTGGCTTaGTCCTGGGGACCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTWRFLA*SWGPSW
Trigger: CCAGGAGGGTCCCCAGGACAAAGCCAAGAAGCGCCA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCAGCAAGGTGGCGGCTaGTGCTGCTGCCAACCACTG +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSQQGGG*CCCQPL
Trigger: CAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACAGCAAGGTGGCGGCTaGTGCTGCTGCCAACCACTG +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTQQGGG*CCCQPL
Trigger: CAGTGGTTGGCAGCAGCACAAGCCGCCACCTTGCTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCAGGGGCCAGGTCTCTGCTTGAGAAAGGGGCTGTTATGTTAGCCCACTACCATTGTCCAAAGACTTTGTaGTACCAGTCAGGAGAACGG +
Preference number: 5 (lower is better)
Translates to: PGARSLLEKGAVMLAHYHCPKTL*YQSGER
Trigger: CCGTTCTCCTGACTGGTACAACAAAGTCTTTGGACA...ATGGTAGTGGGCTAACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp ATTTACACAAATGAAACAGCTCGTGGTGACTGGGGCTGCCCTGCGCTCCACCCCAGGTGTCCAAAGACTTaGTTGTACCAGTCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: IYTNETARGDWGCPALHPRCPKT*LYQSGE
Trigger: TTCTCCTGACTGGTACAACAAAGTCTTTGGACACCT...GGGGTGGAGCGCAGGGCAGCCCCAGTCACCACGAGCTGTTTCATTTGTGTAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCGAAGGGGGAGTGGAGTaGCCTAAATTCTCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETEGGVE*PKFSFS
Trigger: AGAAAAAGAGAATTTAGGCAACTCCACTCCCCCTTC...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AAAATCCAGCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTGGAGATTCCTCCTCATGAACTaGGGCATTGACCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: KIQLRGSHDNCGKMRLWRFLLMN*GIDQTQ
Trigger: CTGGGTCTGGTCAATGCCCAAGTTCATGAGGAGGAA...TCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGCTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCTGGGTGGCTGCCATGTaGTCACTCAGGTCCCTAGGG +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSWVAAM*SLRSLG
Trigger: CCCTAGGGACCTGAGTGACAACATGGCAGCCACCCA...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp TTGCCCTCTCAGTCTGGCAGAGAGCTGGGATCACACATTGCTGTCGACCTCTTTTGTCCAAAGACTTTGTaGTACCAGTCAGGAGAACGG +
Preference number: 5 (lower is better)
Translates to: LPSQSGRELGSHIAVDLFCPKTL*YQSGER
Trigger: CCGTTCTCCTGACTGGTACAACAAAGTCTTTGGACA...AAAGAGGTCGACAGCAATGTGTGATCCCAGCTCTCTGCCAGACTGAGAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGACCTCAAAAGCATCCTaGCAGCAAACAAGACGGCTT +
Preference number: 5 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQTSKAS*QQTRRL
Trigger: AAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACATTACGATGGCGCTTCTaGGCTTTGTCCTGGGGACCC +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTLRWRF*ALSWGP
Trigger: GGGTCCCCAGGACAAAGCCAAGAAGCGCCATCGTAA...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAACGCTCATCCAGCCCTaGAAGCGCTCAGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTTLIQP*KRSAAS
Trigger: TGATGCTGCTGAGCGCTTCAAGGGCTGGATGAGCGT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAGGTGTCCAAAGACTTaGTTGTACCAGTCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQRCPKT*LYQSGE
Trigger: TTCTCCTGACTGGTACAACAAAGTCTTTGGACACCT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCTGTCCAACCTCAAAAGCATCCTTGCAGCAAACAAGACGGCTTGCCCTCTCAGAAATTACAGTGGTGGTaGGGACCCATCTCATTTCAG +
Preference number: 5 (lower is better)
Translates to: PVQPQKHPCSKQDGLPSQKLQWW*GPISFQ
Trigger: CTGAAATGAGATGGGTCCCAACCACCACTGTAATTT...CTGAGAGGGCAAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGTTGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp GCTGAGAGGAAGCCACGACAACTGCGGAAAGATGAGGCTTTGGAGACCTTCTCTAAATTACAGTGGTGGTaGGGACCCATCTCATTTCAG +
Preference number: 5 (lower is better)
Translates to: AERKPRQLRKDEALETFSKLQWW*GPISFQ
Trigger: CTGAAATGAGATGGGTCCCAACCACCACTGTAATTT...AGAGAAGGTCTCCAAAGCCTCATCTTTCCGCAGTTGTCGTGGCTTCCTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523864.5
CDS GCA 90 bp AAACGAACCTTCTTCAAAAAGCTGCACATACTGAGGGAATCCTGTTaGTTGAAGCCACTCACATGCTCTTTTGGCCTCGGCTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: KRTFFKKLHILRESC*LKPLTCSFGLGFWR
Trigger: CCTCCAGAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAAGAAGGTTCGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS-3UTR CAA 90 bp GCGTGGCCAAAGGCTACACAGGACCCCATGGGGTGGTCGATAAAGTGTGAAACCTTCATTCTGCTTGCTTaGAAAATGAACCTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: AWPKATQDPMGWSIKCETFILLA*KMNLQF
Trigger: AAACTGGAGGTTCATTTTCAAAGCAAGCAGAATGAA...GGTTTCACACTTTATCGACCACCCCATGGGGTCCTGTGTAGCCTTTGGCCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACACAAGTAGCGCATGGCTaGCTGAATGCTCTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTQVAHG*LNALWQ
Trigger: CTGCCACAGAGCATTCAGCAAGCCATGCGCTACTTG...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAGGAGTCCCGGATCTTaGCCACTTCCATGGCACACA +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSRSPGS*PLPWHT
Trigger: TGTGTGCCATGGAAGTGGCAAAGATCCGGGACTCCT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGGGCCAGGTCTCTGCTaGAGAAAGGGGCTGTTATGT +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTGPGLC*RKGLLC
Trigger: ACATAACAGCCCCTTTCTCAAGCAGAGACCTGGCCC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS GCA 90 bp AAACGAACCTTCTTCAAAAAGCTGCACATACTGAGGGAATCCTGTTaGTTGAAGCCACTCACATGCTCTTTTGGCCTCGGCTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: KRTFFKKLHILRESC*LKPLTCSFGLGFSV
Trigger: AACGCTGAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAAGAAGGTTCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374599.8
CDS-3UTR CAA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATGTGGCTGGACTATGCTaGGGCTCTGCTTGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNVAGLC*GSACWL
Trigger: CAGCCAGCAAGCAGAGCCCAAGCATAGTCCAGCCAC...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAAAAGTGGTGGTGAGCTaGCTGGTGAAGATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTKVVVS*LVKMGS
Trigger: TGAGCCCATCTTCACCAGCAAGCTCACCACCACTTT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAGGAGTCCCGGATCTTaGCCACTTCCATGGCACACA +
Preference number: 5 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTRSPGS*PLPWHT
Trigger: TGTGTGCCATGGAAGTGGCAAAGATCCGGGACTCCT...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAACTGAGGGAATCCTGTaGCTTGAAGCCACTCACATG +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTTEGIL*LEATHM
Trigger: CATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGT...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CCCACTACCATAAGCAAAAGGGATGATGACATAGACCCTTGTCTCTTAACCACAGCCTCAGCTTGGCATTaGACCTCAACTGTGGCTATT +
Preference number: 5 (lower is better)
Translates to: PTTISKRDDDIDPCLLTTASAWH*TSTVAI
Trigger: AATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGC...TGTGGTTAAGAGACAAGGGTCTATGTCATCATCCCTTTTGCTTATGGTAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCCGAGGTCTCATTCATTaGACGCAGGTTCTGGATCCT +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSRGLIH*TQVLDP
Trigger: AGGATCCAGAACCTGCGTCAAATGAATGAGACCTCG...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACACTGGTGGCAGCAGTCTaGCTACTCATGCGATTCTCT +
Preference number: 5 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTLVAAV*LLMRFS
Trigger: AGAGAATCGCATGAGTAGCAAGACTGCTGCCACCAG...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCAGAGATTCAAGGTGCTaGAGGAAGCTACGGTTACGA +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSRDSRC*RKLRLR
Trigger: TCGTAACCGTAGCTTCCTCAAGCACCTTGAATCTCT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp AGGCTTGAAAATTACAGTGGTGGTTGGGACCCATCTCATTTCAGTTTACTCAGCACCTCAAAAGCATCCTaGCAGCAAACAAGACGGCTT +
Preference number: 5 (lower is better)
Translates to: RLENYSGGWDPSHFSLLSTSKAS*QQTRRL
Trigger: AAGCCGTCTTGTTTGCTGCAAGGATGCTTTTGAGGT...GCTGAGTAAACTGAAATGAGATGGGTCCCAACCACCACTGTAATTTTCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS TCA 90 bp GTAATGGGATGGCTGGGTCAAATGGTATTTCTACTTCTAGATCCTTaGGGAATCGCCACACTGTCTTCCACAATGGCTGAACTAGTTTAC +
Preference number: 5 (lower is better)
Translates to: VMGWLGQMVFLLLDP*GIATLSSTMAELVY
Trigger: GTAAACTAGTTCAGCCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAAGTAGAAATACCATTTGACCCAGCCATCCCATTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488088.1
CDS-3UTR CAA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATTACAGCTCAGGCAAGTaGTCATACGTGCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNYSSGK*SYVLAW
Trigger: CCATGCCAGCACGTATGACAACTTGCCTGAGCTGTA...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATAAAGTGGTGGTGAGCTaGCTGGTGAAGATGGGCTCA +
Preference number: 5 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNKVVVS*LVKMGS
Trigger: TGAGCCCATCTTCACCAGCAAGCTCACCACCACTTT...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS TCA 90 bp ACTTCTAGATCCTTGAGGAATCGCCACACTGTCTTCCACAATGGCTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGATCCTATT +
Preference number: 5 (lower is better)
Translates to: TSRSLRNRHTVFHNG*TSLQSHQQCKSDPI
Trigger: AATAGGATCACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAGCCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGATCTAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488088.1
CDS-3UTR CAA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTGCCTCAGCTTGGCATTaGACCTCAACTGTGGCTATT +
Preference number: 5 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICASAWH*TSTVAI
Trigger: AATAGCCACAGTTGAGGTCAAATGCCAAGCTGAGGC...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAGACACTTGCCCCCACCAGAGATTATAATACACTCATGAGAATTGATATATGTCTGGCATCTCGAGACTaGAGAAAGGAAGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: QTLAPTRDYNTLMRIDICLASRD*RKEGTP
Trigger: TGGAGTACCTTCCTTTCTCAAGTCTCGAGATGCCAG...ACATATATCAATTCTCATGAGTGTATTATAATCTCTGGTGGGGGCAAGTGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CGTCAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACATTCATTCTGCTTGCTTaGAAAATGAACCTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: RQCPLLTQPHKIQHRIYTFILLA*KMNLQF
Trigger: AAACTGGAGGTTCATTTTCAAAGCAAGCAGAATGAA...TGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTGACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS-3UTR CAA 90 bp CAGTGCCCACTCTTAACTCAGCCTCATAAAATTCAGCATCGTATTTACACAAATTTCATTCTGCTTGCTTaGAAAATGAACCTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QCPLLTQPHKIQHRIYTNFILLA*KMNLQF
Trigger: AAACTGGAGGTTCATTTTCAAAGCAAGCAGAATGAA...ATTTGTGTAAATACGATGCTGAATTTTATGAGGCTGAGTTAAGAGTGGGCACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000523864.5
CDS GCA 72 bp CAGAGCGAGCGGGCAGGAGGCGAGCCCAGGAGGGACTaGTCCGTCCGGGACACACGCGGGGCCTGGGGTCGG +
Preference number: 6 (lower is better)
Translates to: QSERAGGEPRRD*SVRDTRGAWGR
Trigger: CCGACCCCAGGCCCCGCGTGTGTCCCGGACGGAGCAGTCCCTCCTGGGCTCGCCTCCTGCCCGCTCGCTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS GCA 72 bp GGGAGAGGCGGAGAGCAGCGGTTGCCGGGGCTCAGCTaGCTCGACAGCGGGCGCCTCCCGCCTCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: GRGGEQRLPGLS*LDSGRLPPPGR
Trigger: CCTTCCAGGAGGCGGGAGGCGCCCGCTGTCGAGGCAGCTGAGCCCCGGCAACCGCTGCTCTCCGCCTCTCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374599.8
ENST00000488088.1
ENST00000523864.5
CDS TCA 72 bp TCTGGAGGCCGCGTCCACCCCTTTGGGTTCGGGCGCTaGCACAGAGCGAGCGGGCAGGAGGCGAGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: SGGRVHPFGFGR*HRASGQEASPG
Trigger: TCCTGGGCTCGCCTCCTGCCCGCTCGCTCTGTGTCAGCGCCCGAACCCAAAGGGGTGGACGCGGCCTCCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS CCA 72 bp AGACCAGAAAACGTCCAGCAGAGGCATGGTGGCGCGTaGGGAGCTTCTAGGGCCGGCGGGGCTGTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: RPENVQQRHGGA*GASRAGGAVPG
Trigger: GCCCGGCACAGCCCCGCCGGCCCTAGAAGCTCCCCACGCGCCACCATGCCTCTGCTGGACGTTTTCTGGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374599.8
ENST00000488088.1
ENST00000523864.5
CDS CCA 72 bp TTTGGCCTCGGCTTCTGGAGGCCGCGTCCACCCCTTTaGGTTCGGGCGCTGACACAGAGCGAGCGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: FGLGFWRPRPPL*VRALTQSERAG
Trigger: TCCTGCCCGCTCGCTCTGTGTCAGCGCCCGAACCCAAAGGGGTGGACGCGGCCTCCAGAAGCCGAGGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS CAA 72 bp TTTTGGCCTCGGCTTCTGGAGGCCGCGTCCACCCCTTaGGGTTCGGGCGCTGACACAGAGCGAGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: FWPRLLEAASTP*GSGADTERAGR
Trigger: CCTGCCCGCTCGCTCTGTGTCAGCGCCCGAACCCAAAGGGGTGGACGCGGCCTCCAGAAGCCGAGGCCAAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS GCA 72 bp GCTCTTTTGGCCTCGGCTTCAGCGTTCTTCTTCACCTaGAGCAATGGGAAGCACTTCACCTTCCTGAAGCAA +
Preference number: 6 (lower is better)
Translates to: ALLASASAFFFT*SNGKHFTFLKQ
Trigger: TTGCTTCAGGAAGGTGAAGTGCTTCCCATTGCTGCAGGTGAAGAAGAACGCTGAAGCCGAGGCCAAAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000252336.10
ENST00000374599.8
ENST00000523864.5
CDS CAA 90 bp CGAACCTTCTTCAAAAAGCTGCACATACTGAGGGAATCCTGTTGCTaGAAGCCACTCACATGCTCTTTTGGCCTCGGCTTCTGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: RTFFKKLHILRESCC*KPLTCSFGLGFWRP
Trigger: CGGCCTCCAGAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAAGAAGGTTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374597.3
CDS GCA 72 bp TCCTTCAAAAAGCTGCACATACTGAGGGAATCCTGTTaGTTGAAGCCACTCACATGCTCTTTTGGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: SFKKLHILRESC*LKPLTCSFGLG
Trigger: GCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252336.10
ENST00000523864.5
CDS CAA 90 bp CGAACCTTCTTCAAAAAGCTGCACATACTGAGGGAATCCTGTTGCTaGAAGCCACTCACATGCTCTTTTGGCCTCGGCTTCAGCGTTCTT +
Preference number: 6 (lower is better)
Translates to: RTFFKKLHILRESCC*KPLTCSFGLGFSVL
Trigger: AAGAACGCTGAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAAGAAGGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374599.8
CDS GCA 72 bp TTCTTCAAAAAGCTGCACATACTGAGGGAATCCTGTTaGTTGAAGCCACTCACATGCTCTTTTGGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: FFKKLHILRESC*LKPLTCSFGLG
Trigger: GCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374597.3
ENST00000374599.8
CDS CAA 72 bp TTCAAAAAGCTGCACATACTGAGGGAATCCTGTTGCTaGAAGCCACTCACATGCTCTTTTGGCCTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: FKKLHILRESCC*KPLTCSFGLGF
Trigger: GAAGCCGAGGCCAAAAGAGCATGTGAGTGGCTTCAAGCAACAGGATTCCCTCAGTATGTGCAGCTTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252336.10
ENST00000374597.3
ENST00000374599.8
ENST00000523864.5
CDS TCA 72 bp TCCTTGAGGAATCGCCACACTGTCTTCCACAATGGCTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: SLRNRHTVFHNG*TSLQSHQQCKS
Trigger: ACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAGCCATTGTGGAAGACAGTGTGGCGATTCCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488088.1
CDS TCA 72 bp TCCTATTTCTCCACACCCTCTCCTGATGTTGTTTCCTaGCTTTTTAATGATCGCCATTCTAACTGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: SYFSTPSPDVVS*LFNDRHSNWCE
Trigger: CTCACACCAGTTAGAATGGCGATCATTAAAAAGTCAGGAAACAACATCAGGAGAGGGTGTGGAGAAATAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488088.1
CDS CCA 72 bp ATGTCTTCTTTTGAGAAAGGCGAAGTAACTTTCTCATaGTCAACACAGCTAGCAAGTTGTGGCTCAGATAGG +
Preference number: 6 (lower is better)
Translates to: MSSFEKGEVTFS*STQLASCGSDR
Trigger: CCTATCTGAGCCACAACTTGCTAGCTGTGTTGACCATGAGAAAGTTACTTCGCCTTTCTCAAAAGAAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488088.1
CDS CCA 72 bp ATTTATAATCTTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAATGGTATTTCTACTTCTAGATCCT +
Preference number: 6 (lower is better)
Translates to: IYNLLGIYPVMG*LGQMVFLLLDP
Trigger: AGGATCTAGAAGTAGAAATACCATTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAAGATTATAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488088.1