Pregenerated sensors for STARD6 (Homo sapiens)
Ensembl gene IDs: ENSG00000174448Ensembl transcript IDs: ENST00000307844.3, ENST00000577499.5, ENST00000581310.5, ENST00000584040.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAATAACTACTACACATaGTTTTATAGCAGAACGGCC | + |
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Preference number: 2 (lower is better) Translates to: LTVSAFLLVLIQRILQGQNNYYT*FYSRTA Trigger: GGCCGTTCTGCTATAAAATCATGTGTAGTAGTTATT...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAACATGTTGGGGCGGTTTaGAAGCGAGCGCGGGTGTCG | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKHVGAV*KRARVS Trigger: CGACACCCGCGCTCGCTTTCAAACCGCCCCAACATG...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAAAGGCCGGCGCCATGTTaGGGCGGTTTGAAAGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKRPAPC*GGLKAS Trigger: GCTCGCTTTCAAACCGCCCCAACATGGCGCCGGCCT...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | TTAATGCTGACCTCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATAGTCTCGAGGGGAAATaGAGCCCACGGCAAAACTTT | + |
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Preference number: 4 (lower is better) Translates to: LMLTSDCICFLIGPYTEDSLEGK*SPRQNF Trigger: AAAGTTTTGCCGTGGGCTCCATTTCCCCTCGAGACT...ATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGAGGTCAGCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAATCTTGGGCAGTTTGTTaGGCAATTGCCTTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LTVSAFLLVLIQRILQGQSWAVC*AIALKS Trigger: GGACTTCAAGGCAATTGCCCAACAAACTGCCCAAGA...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAAAAACCAACATTGGGATaGCCTCTTCCAGCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKKPTLG*PLPAGV Trigger: GACCCCTGCTGGAAGAGGCCATCCCAATGTTGGTTT...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAATGAAATCCACGTCTTaGTGGAGTTCTGTGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LTVSAFLLVLIQRILQGQMKSTS*WSSVCL Trigger: AAGGCACACAGAACTCCATCAAGACGTGGATTTCAT...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | TTAATGCTGACCTCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATAACATAAACCAACATTaGGATGGCCTCTTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: LMLTSDCICFLIGPYTEDNINQH*DGLFQQ Trigger: CTGCTGGAAGAGGCCATCCCAATGTTGGTTTATGTT...ATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGAGGTCAGCATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAGAACGTCGGATGAGCTaGAACATATTCAGATGGACT | + |
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Preference number: 4 (lower is better) Translates to: SDCICFLIGPYTEDFTGTERRMS*NIFRWT Trigger: AGTCCATCTGAATATGTTCCAGCTCATCCGACGTTC...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAACCACTTTCCAGCCTaGTGTATCTCGATTATAACC | + |
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Preference number: 4 (lower is better) Translates to: LTVSAFLLVLIQRILQGQNHFPA*CISIIT Trigger: GGTTATAATCGAGATACATCAGGCTGGAAAGTGGTT...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAGTTTTCTTCCATTGGTaGACATACAAAGCCACAAGG | + |
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Preference number: 4 (lower is better) Translates to: SDCICFLIGPYTEDFTGTVFFHW*TYKATR Trigger: CCTTGTGGCTTTGTATGTTCACCAATGGAAGAAAAC...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAATGGTGGAACGTCGGATaGGCTGGAACATATTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKWWNVG*AGTYSD Trigger: ATCTGAATATGTTCCAGCTCATCCGACGTTCCACCA...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAAGTTGGGCAATTGCCTTaGAGTCCATCTATCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKVGQLP*SPSIFP Trigger: AGGAAAGATAGATGGACTTCAAGGCAATTGCCCAAC...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR GCA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAGTTTGTTGGGCAATTaGCTTGAAGTCCATCTATCT | + |
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Preference number: 4 (lower is better) Translates to: SDCICFLIGPYTEDFTGTSLLGN*LEVHLS Trigger: AGATAGATGGACTTCAAGGCAATTGCCCAACAAACT...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAACTTTGTGTAATGGTATaGCATATGAATGTGTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: LTVSAFLLVLIQRILQGQLCVMV*HMNVSE Trigger: TTCGGACACATTCATATGTCATACCATTACACAAAG...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAATAACTACTACACATaGTTTTATAGCAGAACGGCC | + |
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Preference number: 4 (lower is better) Translates to: SDCICFLIGPYTEDFTGTNNYYT*FYSRTA Trigger: GGCCGTTCTGCTATAAAATCATGTGTAGTAGTTATT...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAATGGAACATATTCAGATaGACTCATGGTCAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LTVSAFLLVLIQRILQGQWNIFR*THGQGY Trigger: ATATCCTTGACCATGAGTCCATCTGAATATGTTCCA...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR TCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAAGTTAATGCTGACCTCTaGCTGTATCTGCTTTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKVNADL*LYLLSY Trigger: ATAAGAAAGCAGATACAGTCAGAGGTCAGCATTAAC...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAACAAACATCACTAGTTTaGAATATGCTGGGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LTVSAFLLVLIQRILQGQQTSLV*NMLGFL Trigger: AAGAAAACCCAGCATATTCCAAACTAGTGATGTTTG...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CCA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAACCTCTCATTTCTGTCTaGACAAACATCACTAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKPLISV*TNITSL Trigger: CAAACTAGTGATGTTTGTCCAGACAGAAATGAGAGG...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS GCA 90 bp | CCGCTCCCTCATCTCCGCTCGCGCCCGGCGCCCCACTGCCGCGCATaGGCACCGCAGGCCGGCGCCATGTTGGGGCGGTTTGAAAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: PLPHLRSRPAPHCRA*APQAGAMLGRFESE Trigger: CTCGCTTTCAAACCGCCCCAACATGGCGCCGGCCTGCGGTGCGCATGCGCGGCAGTGGGGCGCCGGGCGCGAGCGGAGATGAGGGAGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACACAGGCCGGCGCCATGTaGGGGCGGTTTGAAAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: SDCICFLIGPYTEDFTGTQAGAM*GRFESE Trigger: CTCGCTTTCAAACCGCCCCAACATGGCGCCGGCCTG...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACACCATGTTGGGGCGGTTaGAAAGCGAGCGCGGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SDCICFLIGPYTEDFTGTPCWGG*KASAGV Trigger: GACACCCGCGCTCGCTTTCAAACCGCCCCAACATGG...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS CCA 90 bp | TCTATTATTACTGCTGTGAATGAGTTCCGGAAGCTGCAGTCTCACTaGTCCTTCGGGTCATCATCCAGCTTTCAGTTAGGGGAAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SIITAVNEFRKLQSH*SFGSSSSFQLGEAF Trigger: GAAAGCTTCCCCTAACTGAAAGCTGGATGATGACCCGAAGGACCAGTGAGACTGCAGCTTCCGGAACTCATTCACAGCAGTAATAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584040.1 |
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| CDS TCA 90 bp | TTGTGGAAATCTCCATATCTCTTAACATGGTGGTGGAACGTCGGATaGGCTGGAACATATTCAGATGGACTCATGGTCAAGGATATCTTC | + |
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Preference number: 5 (lower is better) Translates to: LWKSPYLLTWWWNVG*AGTYSDGLMVKDIF Trigger: GAAGATATCCTTGACCATGAGTCCATCTGAATATGTTCCAGCTCATCCGACGTTCCACCACCATGTTAAGAGATATGGAGATTTCCACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACATTCTTGGGCAGTTTGTaGGGCAATTGCCTTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SDCICFLIGPYTEDFTGTFLGSL*GNCLEV Trigger: GACTTCAAGGCAATTGCCCAACAAACTGCCCAAGAA...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAGATGAAATCCACGTCTaGATGGAGTTCTGTGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LTVSAFLLVLIQRILQGQDEIHV*MEFCVP Trigger: AGGCACACAGAACTCCATCAAGACGTGGATTTCATC...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | TTAATGCTGACCTCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATAACTTCTTGGGCAGTTaGTTGGGCAATTGCCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LMLTSDCICFLIGPYTEDNFLGS*LGNCLE Trigger: TTCAAGGCAATTGCCCAACAAACTGCCCAAGAAGTT...ATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGAGGTCAGCATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAACTCCTCTCCAAATCCTaGTGGAAATCTCCATATCTC | + |
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Preference number: 5 (lower is better) Translates to: LTVSAFLLVLIQRILQGQLLSKS*WKSPYL Trigger: GAGATATGGAGATTTCCACAAGGATTTGGAGAGGAG...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACATGTTGGGCAATTGCCTaGAAGTCCATCTATCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SDCICFLIGPYTEDFTGTCWAIA*KSIYLS Trigger: GGAAAGATAGATGGACTTCAAGGCAATTGCCCAACA...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | CTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAACATAAACCAACATaGGGATGGCCTCTTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LTVSAFLLVLIQRILQGQKHKPT*GWPLPA Trigger: TGCTGGAAGAGGCCATCCCAATGTTGGTTTATGTTT...TTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | ATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAAAAGCAAAAGCCCACGGCAAAACTTaGTGTAATGGTATGACATAT | + |
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Preference number: 5 (lower is better) Translates to: ICFLIGPYTEDFTGTKAKAHGKT*CNGMTY Trigger: ATATGTCATACCATTACACAAAGTTTTGCCGTGGGC...TTTTGCTTTTGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS-3UTR CAA 90 bp | TCTGACTGTATCTGCTTTCTTATTGGTCCTTATACAGAGGATTTTACAGGGACAACAAACATCACTAGTTaGGAATATGCTGGGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SDCICFLIGPYTEDFTGTTNITS*EYAGFS Trigger: AGAAAACCCAGCATATTCCAAACTAGTGATGTTTGT...TGTCCCTGTAAAATCCTCTGTATAAGGACCAATAAGAAAGCAGATACAGTCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS CAA 72 bp | CATGCGCACCGCAGGCCGGCGCCATGTTGGGGCGGTTaGAAAGCGAGCGCGGGTGTCGAGCTCTGCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: HAHRRPAPCWGG*KASAGVELCCD Trigger: GTCACAGCAGAGCTCGACACCCGCGCTCGCTTTCAAACCGCCCCAACATGGCGCCGGCCTGCGGTGCGCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS TCA 72 bp | ATGCGCACCGCAGGCCGGCGCCATGTTGGGGCGGTTTaGAAGCGAGCGCGGGTGTCGAGCTCTGCTGTGACT | + |
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Preference number: 6 (lower is better) Translates to: MRTAGRRHVGAV*KRARVSSSAVT Trigger: AGTCACAGCAGAGCTCGACACCCGCGCTCGCTTTCAAACCGCCCCAACATGGCGCCGGCCTGCGGTGCGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS CCA 72 bp | ACTGCTGTGAATGAGTTCCGGAAGCTGCAGTCTCACTaGTCCTTCGGGTCATCATCCAGCTTTCAGTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TAVNEFRKLQSH*SFGSSSSFQLG Trigger: CCCTAACTGAAAGCTGGATGATGACCCGAAGGACCAGTGAGACTGCAGCTTCCGGAACTCATTCACAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000584040.1 |
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| CDS TCA 72 bp | TCTCCATATCTCTTAACATGGTGGTGGAACGTCGGATaGGCTGGAACATATTCAGATGGACTCATGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPYLLTWWWNVG*AGTYSDGLMVK Trigger: CTTGACCATGAGTCCATCTGAATATGTTCCAGCTCATCCGACGTTCCACCACCATGTTAAGAGATATGGAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS CCA 72 bp | ATATCTCTTAACATGGTGGTGGAACGTCGGATGAGCTaGAACATATTCAGATGGACTCATGGTCAAGGATAT | + |
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Preference number: 6 (lower is better) Translates to: ISLNMVVERRMS*NIFRWTHGQGY Trigger: ATATCCTTGACCATGAGTCCATCTGAATATGTTCCAGCTCATCCGACGTTCCACCACCATGTTAAGAGATAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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| CDS TCA 72 bp | CTAAAACTTCTTGGGCAGTTTGTTGGGCAATTGCCTTaGAGTCCATCTATCTTTCCTGACAGATCTAATGCA | + |
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Preference number: 6 (lower is better) Translates to: LKLLGQFVGQLP*SPSIFPDRSNA Trigger: TGCATTAGATCTGTCAGGAAAGATAGATGGACTTCAAGGCAATTGCCCAACAAACTGCCCAAGAAGTTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577499.5 ENST00000581310.5 |
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| CDS TCA 72 bp | CTAAAACTTCTTGGGCAGTTTGTTGGGCAATTGCCTTaGAGTCCATCTATTATTACTGCTGTGAATGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LKLLGQFVGQLP*SPSIITAVNEF Trigger: GAACTCATTCACAGCAGTAATAATAGATGGACTTCAAGGCAATTGCCCAACAAACTGCCCAAGAAGTTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000584040.1 |
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| CDS CAA 72 bp | GATGGAGTTCTGTGTGCCTTTATTCCATCTTTTGCATaGAGGATGAAGTTTACTAAGTTGGAAGGCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: DGVLCAFIPSFA*RMKFTKLEGMV Trigger: AACCATGCCTTCCAACTTAGTAAACTTCATCCTCAATGCAAAAGATGGAATAAAGGCACACAGAACTCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307844.3 ENST00000581310.5 |
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| CDS CCA 72 bp | TTCCTCTCATTTCTGTCTGGACAAACATCACTAGTTTaGAATATGCTGGGTTTTCTTCCATTGGTGAACATA | + |
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Preference number: 6 (lower is better) Translates to: FLSFLSGQTSLV*NMLGFLPLVNI Trigger: TATGTTCACCAATGGAAGAAAACCCAGCATATTCCAAACTAGTGATGTTTGTCCAGACAGAAATGAGAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307844.3 ENST00000581310.5 |
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| CDS CAA 72 bp | TTTCCTCTCATTTCTGTCTGGACAAACATCACTAGTTaGGAATATGCTGGGTTTTCTTCCATTGGTGAACAT | + |
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Preference number: 6 (lower is better) Translates to: FPLISVWTNITS*EYAGFSSIGEH Trigger: ATGTTCACCAATGGAAGAAAACCCAGCATATTCCAAACTAGTGATGTTTGTCCAGACAGAAATGAGAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307844.3 ENST00000581310.5 |
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| CDS CAA 72 bp | GGTATCATGAATGACTATTATGATGAAATCCACGTCTaGATGGAGTTCTGTGTGCCTTTATTCCATCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GIMNDYYDEIHV*MEFCVPLFHLL Trigger: CAAAAGATGGAATAAAGGCACACAGAACTCCATCAAGACGTGGATTTCATCATAATAGTCATTCATGATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000581310.5 |
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