Pregenerated sensors for STAR (Homo sapiens)
Ensembl gene IDs: ENSG00000147465Ensembl transcript IDs: ENST00000276449.9, ENST00000520114.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCCTCCGGGGTTCAAGTaGTTCCCCTGCCTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFPPGFK*FPCLSL Trigger: GAGGCTGAGGCAGGGGAATCACTTGAACCCCGGAGG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCTTGTTCTGTGGTGTTaGTGTGCAGCGGCCGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFLVLWC*CAAAGR Trigger: CCTCCCGGCCGCTGCACAGCAACACCACAGAACAAG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCACGCTGGAGCGCAGTaGCACAATCTCGGCCCACTA | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFHAGAQ*HNLGPL Trigger: TAGTGGGCCGAGATTGTGCCACTGCGCTCCAGCGTG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCGAGCGTGTGTACCAGTaGAGCTGGGCACAGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFERVYQ*SWAQLG Trigger: TCCCAACTGTGCCCAGCTGCACTGGTACACACGCTC...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCATGGTCTCGATCTCCTaGCCTTGTGATCCGCCTACC | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFMVSIS*PCDPPT Trigger: GGTAGGCGGATCACAAGGTCAGGAGATCGAGACCAT...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTTTGTGCACATGTACTaGCAGCGCATGGCATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFFVHMY*QRMAFL Trigger: CAAGAATGCCATGCGCTGGCAGTACATGTGCACAAA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCAGAACTCCTCTAGTGTaGAGTTGTAATCTACTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFRTPLV*SCNLLA Trigger: TGCTAGTAGATTACAACTTCACACTAGAGGAGTTCT...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCAAACTTTCACCAATCTaGATCCTAGTGTCATACTCT | + |
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Preference number: 2 (lower is better) Translates to: LLGKGICFHHITPSSSHFKLSPI*ILVSYS Trigger: AGAGTATGACACTAGGATTCAGATTGGTGAAAGTTT...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCGCTTGTTCTGTGGTGTaGCTGTGCAGCGGCCGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LLGKGICFHHITPSSSHFACSVV*LCSGRE Trigger: CTCCCGGCCGCTGCACAGCAACACCACAGAACAAGC...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTTTATCCTCTCATATTaGGCACTGCCTTTCCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LLGKGICFHHITPSSSHFFILSY*ALPFLL Trigger: TAAAAGGAAAGGCAGTGCCAAATATGAGAGGATAAA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCAGTGGTGGGGTCGCTaGCGCTGCTGCTGCCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFQWWGR*RCCCRR Trigger: GCGGCGGCAGCAGCAGCGGCAGCGACCCCACCACTG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTGCTGCCGCCGCTGCTaGTGCCTCTTCTCTCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFCCRRC*CLFSQG Trigger: CCCTTGAGAGAAGAGGCAGCAGCAGCGGCGGCAGCA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCAAATGTGGCAGTGGTaGGGTCGCTGCCGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFQMWQW*GRCRCC Trigger: GCAGCAGCGGCAGCGACCCCACCACTGCCACATTTG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTGGCAAATGTGGCAGTaGTGGGGTCGCTGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFWQMWQ*WGRCRC Trigger: GCAGCGGCAGCGACCCCACCACTGCCACATTTGCCA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTGGAGCCTCGGCGCTTaGCACAGCGCACGCTCACAA | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFWSLGA*HSARSQ Trigger: TTGTGAGCGTGCGCTGTGCCAAGCGCCGAGGCTCCA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTGCTGCTGCCGCCGCTaGTGCTGCCTCTTCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFCCCRR*CCLFSQ Trigger: TTGAGAGAAGAGGCAGCAGCAGCGGCGGCAGCAGCA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCGTCAGGCTGGTCTCCTaGCCTCAGGTGATTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFVRLVS*PQVIAC Trigger: GCAGGCAATCACCTGAGGGCAGGAGACCAGCCTGAC...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCTCCGGTTCAGCTCCTaGCTGATGGCCATCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFLRFSS*LMAITA Trigger: GGCTGTGATGGCCATCAGCCAGGAGCTGAACCGGAG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCTCCGCCGCCGAACCTaGTTAATCCACGTGCTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFLRRRT*LIHVLG Trigger: CCCTAGCACGTGGATTAACCAGGTTCGGCGGCGGAG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCGGTTCAGCTCCTGGCTaGTGGCCATCACAGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFGSAPG*WPSQPV Trigger: AACAGGCTGTGATGGCCATCAGCCAGGAGCTGAACC...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTCCCCATTGTCCTGCTaGCTCTCCTTCTTCCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFSPLSC*LSFFQP Trigger: GGGCTGGAAGAAGGAGAGTCAGCAGGACAATGGGGA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCCTCAGGTGATTGCCTaGCTTGGCCTCCCAAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFPQVIA*LGLPKC Trigger: GCACTTTGGGAGGCCAAGGCAGGCAATCACCTGAGG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCGCCATCACAGCCTGTTaGCTCAGCCCCTTCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFAITAC*LSPFML Trigger: CAACATGAAGGGGCTGAGGCAACAGGCTGTGATGGC...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTCTTTTCCGATCTTCTaGAGGACCTTGATCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFSFPIF*RTLISL Trigger: CAAGGAGATCAAGGTCCTGCAGAAGATCGGAAAAGA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCTGGGAAAGGGAATTTaGTTTCACCATATTACCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFLGKGI*FHHITP Trigger: AGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR TCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTCACATAAATTCTCTTaGCTCCTGGGAAAGGGAATT | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFSHKFS*LLGKGI Trigger: AATTCCCTTTCCCAGGAGTCAAGAGAATTTATGTGA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCAATTCTCTTGACTCCTaGGAAAGGGAATTTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGKGICFHHITPSSSHFNSLDS*EREFAF Trigger: GAAAGCAAATTCCCTTTCCCAGGAGTCAAGAGAATT...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS TCA 90 bp | CTCCACCAGCTCTCATCCCTGGAGCTCTGGGTCTGCTCATTGCTCTaGAGAGCCCGGACTAAAGCCATAGGGGCCAGCCTGCTGGTCGAG | + |
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Preference number: 5 (lower is better) Translates to: LHQLSSLELWVCSLL*RARTKAIGASLLVE Trigger: CTCGACCAGCAGGCTGGCCCCTATGGCTTTAGTCCGGGCTCTTCAGAGCAATGAGCAGACCCAGAGCTCCAGGGATGAGAGCTGGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 90 bp | ACAAACAGGCTGCCAGGGGCTTGGTCTTCGAGCTCTGTTAATAGGTaGAGCCTTGGAGTTGCCCAGTCAAGGGCGGGAGGACTGCATTGC | + |
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Preference number: 5 (lower is better) Translates to: TNRLPGAWSSSSVNR*SLGVAQSRAGGLHC Trigger: GCAATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCCCTGGCAGCCTGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CCA 90 bp | TGTAGAAGGAAGCCATGGGTGCACCAAGGGTTGGTTTCTTGGAGCTaGGGATGCAGTCCACATGCTTGGGTGCACACCTGCAGGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: CRRKPWVHQGLVSWS*GCSPHAWVHTCRPV Trigger: CACAGGCCTGCAGGTGTGCACCCAAGCATGTGGACTGCATCCCCAGCTCCAAGAAACCAACCCTTGGTGCACCCATGGCTTCCTTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 90 bp | AGGAAGCCATGGGTGCACCAAGGGTTGGTTTCTTGGAGCTGGGGATaGAGTCCACATGCTTGGGTGCACACCTGCAGGCCTGTGTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: RKPWVHQGLVSWSWG*SPHAWVHTCRPVLE Trigger: TTCTAACACAGGCCTGCAGGTGTGCACCCAAGCATGTGGACTGCATCCCCAGCTCCAAGAAACCAACCCTTGGTGCACCCATGGCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 90 bp | AGGTGCAGCCTTGGAGTTGCCCAGTCAAGGGCGGGAGGACTGCATTaGTCCTCTGCTGTCATGACTTTCAGAAGCACAAGACTGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: RCSLGVAQSRAGGLH*SSAVMTFRSTRLAN Trigger: GTTGGCCAGTCTTGTGCTTCTGAAAGTCATGACAGCAGAGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCGTGGAGCCTCGGCGCTaGGCACAGCGCACGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: LLGKGICFHHITPSSSHFVEPRR*AQRTLT Trigger: TGTGAGCGTGCGCTGTGCCAAGCGCCGAGGCTCCAC...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS CCA 90 bp | GGATTACTGGGATGTCAGGGAAAGGATTCAGGCTGGTGGCTGGGCTaGGGCCTTGGGAAATTCAGGAGGCTGTGGTGTACTGAGTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: GLLGCQGKDSGWWLG*GLGKFRRLWCTEWY Trigger: ATACCACTCAGTACACCACAGCCTCCTGAATTTCCCAAGGCCCCAGCCCAGCCACCAGCCTGAATCCTTTCCCTGACATCCCAGTAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CCA 90 bp | CCACTCTTGACACTGCACCCTATCACAAACAGGCTGCCAGGGGCTTaGTCTTCGAGCTCTGTTAATAGGTGCAGCCTTGGAGTTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PLLTLHPITNRLPGA*SSSSVNRCSLGVAQ Trigger: CTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCCCTGGCAGCCTGTTTGTGATAGGGTGCAGTGTCAAGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CCA 90 bp | TTCTTTTGTAGAAGGAAGCCATGGGTGCACCAAGGGTTGGTTTCTTaGAGCTGGGGATGCAGTCCACATGCTTGGGTGCACACCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: FFCRRKPWVHQGLVS*SWGCSPHAWVHTCR Trigger: CCTGCAGGTGTGCACCCAAGCATGTGGACTGCATCCCCAGCTCCAAGAAACCAACCCTTGGTGCACCCATGGCTTCCTTCTACAAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS TCA 90 bp | TTGCCCAGTCAAGGGCGGGAGGACTGCATTGCTCCTCTGCTGTCATaGCTTTCAGAAGCACAAGACTGGCCAACAAGATGTTTCAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: LPSQGREDCIAPLLS*LSEAQDWPTRCFSL Trigger: CAGGCTGAAACATCTTGTTGGCCAGTCTTGTGCTTCTGAAAGTCATGACAGCAGAGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 90 bp | CCTTGGAGTTGCCCAGTCAAGGGCGGGAGGACTGCATTGCTCCTCTaGTGTCATGACTTTCAGAAGCACAAGACTGGCCAACAAGATGTT | + |
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Preference number: 5 (lower is better) Translates to: PWSCPVKGGRTALLL*CHDFQKHKTGQQDV Trigger: AACATCTTGTTGGCCAGTCTTGTGCTTCTGAAAGTCATGACAGCAGAGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTTGGGCAGCCACCCCTaGAGGTCGATGCTGAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LLGKGICFHHITPSSSHFLGSHP*RSMLSS Trigger: GCTACTCAGCATCGACCTCAAGGGGTGGCTGCCCAA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS CCA 90 bp | AGTTGGCACAGTTACCAGCTCATCAGAATAAAGGCTGCTTGTAGCTaGAGCAGCCCCTGCGGCCTCTTGTGCCCTTTAGTTGCTGGATTA | + |
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Preference number: 5 (lower is better) Translates to: SWHSYQLIRIKAACS*SSPCGLLCPLVAGL Trigger: TAATCCAGCAACTAAAGGGCACAAGAGGCCGCAGGGGCTGCTCCAGCTACAAGCAGCCTTTATTCTGATGAGCTGGTAACTGTGCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCTTCCAGCCCTCTTGGTaGCTAAGGATGCCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LLGKGICFHHITPSSSHFFQPSW*LRMPKA Trigger: GGCCTTGGGCATCCTTAGCAACCAAGAGGGCTGGAA...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCAGGACCTTGATCTCCTaGACATTGGGGTTCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LLGKGICFHHITPSSSHFRTLIS*TLGFHS Trigger: GGAGTGGAACCCCAATGTCAAGGAGATCAAGGTCCT...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCATCTTCTGCAGGACCTaGATCTCCTTGACATTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LLGKGICFHHITPSSSHFIFCRT*ISLTLG Trigger: CCCCAATGTCAAGGAGATCAAGGTCCTGCAGAAGAT...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS-3UTR CAA 90 bp | CTCCTGGGAAAGGGAATTTGCTTTCACCATATTACCCCTTCTTCCAGCCACTTCCCTGGGAAAGGGAATTaGCTTTCACCATATTACCCC | + |
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Preference number: 5 (lower is better) Translates to: LLGKGICFHHITPSSSHFPGKGN*LSPYYP Trigger: GGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGG...GAAGTGGCTGGAAGAAGGGGTAATATGGTGAAAGCAAATTCCCTTTCCCAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000276449.9 |
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| CDS CAA 90 bp | GGCTGCCAGGGGCTTGGTCTTCGAGCTCTGTTAATAGGTGCAGCCTaGGAGTTGCCCAGTCAAGGGCGGGAGGACTGCATTGCTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GCQGLGLRALLIGAA*ELPSQGREDCIAPL Trigger: CAGAGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCCCTGGCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS TCA 72 bp | CTCTCATCCCTGGAGCTCTGGGTCTGCTCATTGCTCTaGAGAGCCCGGACTAAAGCCATAGGGGCCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSSLELWVCSLL*RARTKAIGASL Trigger: CAGGCTGGCCCCTATGGCTTTAGTCCGGGCTCTTCAGAGCAATGAGCAGACCCAGAGCTCCAGGGATGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 72 bp | CTGCCAGGGGCTTGGTCTTCGAGCTCTGTTAATAGGTaGAGCCTTGGAGTTGCCCAGTCAAGGGCGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LPGAWSSSSVNR*SLGVAQSRAGG Trigger: TCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CAA 90 bp | CAGGGGCTTGGTCTTCGAGCTCTGTTAATAGGTGCAGCCTTGGAGTaGCCCAGTCAAGGGCGGGAGGACTGCATTGCTCCTCTGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QGLGLRALLIGAALE*PSQGREDCIAPLLS Trigger: TGACAGCAGAGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 72 bp | GCTGCTTGTAGCTGGAGCAGCCCCTGCGGCCTCTTGTaGCCTTTAGTTGCTGGATTACTGGGATGTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: AACSWSSPCGLL*PLVAGLLGCQG Trigger: TCCCTGACATCCCAGTAATCCAGCAACTAAAGGGCACAAGAGGCCGCAGGGGCTGCTCCAGCTACAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CAA 72 bp | AAGGCTGCTTGTAGCTGGAGCAGCCCCTGCGGCCTCTaGTGCCCTTTAGTTGCTGGATTACTGGGATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: KAACSWSSPCGL*CPLVAGLLGCQ Trigger: CTGACATCCCAGTAATCCAGCAACTAAAGGGCACAAGAGGCCGCAGGGGCTGCTCCAGCTACAAGCAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CAA 72 bp | GGTCTTCGAGCTCTGTTAATAGGTGCAGCCTTGGAGTaGCCCAGTCAAGGGCGGGAGGACTGCATTGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GLRALLIGAALE*PSQGREDCIAP Trigger: AGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CAA 72 bp | GGGCTTGGTCTTCGAGCTCTGTTAATAGGTGCAGCCTaGGAGTTGCCCAGTCAAGGGCGGGAGGACTGCATT | + |
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Preference number: 6 (lower is better) Translates to: GLGLRALLIGAA*ELPSQGREDCI Trigger: AATGCAGTCCTCCCGCCCTTGACTGGGCAACTCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS GCA 72 bp | TGCCCAGTCAAGGGCGGGAGGACTGCATTGCTCCTCTaGTGTCATGACTTTCAGAAGCACAAGACTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: CPVKGGRTALLL*CHDFQKHKTGQ Trigger: TTGGCCAGTCTTGTGCTTCTGAAAGTCATGACAGCAGAGGAGCAATGCAGTCCTCCCGCCCTTGACTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CAA 90 bp | TGGGATGTCAGGGAAAGGATTCAGGCTGGTGGCTGGGCTGGGGCCTaGGGAAATTCAGGAGGCTGTGGTGTACTGAGTGGTATGGATTAT | + |
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Preference number: 6 (lower is better) Translates to: WDVRERIQAGGWAGA*GNSGGCGVLSGMDY Trigger: ATAATCCATACCACTCAGTACACCACAGCCTCCTGAATTTCCCAAGGCCCCAGCCCAGCCACCAGCCTGAATCCTTTCCCTGACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS TCA 72 bp | GAGAATTTGGCCATCTTGTGGGTTTTGGCCCACTCTTaGCACTGCACCCTATCACAAACAGGCTGCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: ENLAILWVLAHS*HCTLSQTGCQG Trigger: CCCCTGGCAGCCTGTTTGTGATAGGGTGCAGTGTCAAGAGTGGGCCAAAACCCACAAGATGGCCAAATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CCA 72 bp | ACACTGCACCCTATCACAAACAGGCTGCCAGGGGCTTaGTCTTCGAGCTCTGTTAATAGGTGCAGCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: TLHPITNRLPGA*SSSSVNRCSLG Trigger: TCCAAGGCTGCACCTATTAACAGAGCTCGAAGACCAAGCCCCTGGCAGCCTGTTTGTGATAGGGTGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS TCA 72 bp | CAAGGGCGGGAGGACTGCATTGCTCCTCTGCTGTCATaGCTTTCAGAAGCACAAGACTGGCCAACAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: QGREDCIAPLLS*LSEAQDWPTRC Trigger: ACATCTTGTTGGCCAGTCTTGTGCTTCTGAAAGTCATGACAGCAGAGGAGCAATGCAGTCCTCCCGCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS TCA 72 bp | TTAGTCTACATTACAGCTGTTCCTGAGCGTACCAGGTaGACCTCAGCCCTGCCCCATGCTTCAGAAAATTAT | + |
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Preference number: 6 (lower is better) Translates to: LVYITAVPERTR*TSALPHASENY Trigger: ATAATTTTCTGAAGCATGGGGCAGGGCTGAGGTTCACCTGGTACGCTCAGGAACAGCTGTAATGTAGACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS TCA 72 bp | GCCATCACTCCAGACCCTTCCCTGTCTTACAGCCTGTaGTTCTATCAGAATAGAAGAGGATTCTTTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AITPDPSLSYSL*FYQNRRGFFLQ Trigger: CTGCAGAAAGAATCCTCTTCTATTCTGATAGAATCACAGGCTGTAAGACAGGGAAGGGTCTGGAGTGATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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| CDS CCA 72 bp | TGGCTGGGCTGGGGCCTTGGGAAATTCAGGAGGCTGTaGTGTACTGAGTGGTATGGATTATTTCAATATTTT | + |
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Preference number: 6 (lower is better) Translates to: WLGWGLGKFRRL*CTEWYGLFQYF Trigger: AAAATATTGAAATAATCCATACCACTCAGTACACCACAGCCTCCTGAATTTCCCAAGGCCCCAGCCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520114.1 |
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