Pregenerated sensors for STAG1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261758Ensembl transcript IDs: ENST00000564748.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGGCCTCACCCTCGGGTTTCCGCAGGGCGTCTCGAGAGCTGCGGATaGGGGCAGCAGGAGCCGGGCGGGAACAGAGGAAAGCGCCGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RPHPRVSAGRLESCG*GQQEPGGNRGKRRP Trigger: GGGCCGGCGCTTTCCTCTGTTCCCGCCCGGCTCCTGCTGCCCCCATCCGCAGCTCTCGAGACGCCCTGCGGAAACCCGAGGGTGAGGCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS TCA 90 bp | TGGGGGCAGCAGGAGCCGGGCGGGAACAGAGGAAAGCGCCGGCCCTaGGACCTAGGGAGGAGCCTCGGTGAAGGAACCCGGGGCGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: WGQQEPGGNRGKRRP*DLGRSLGEGTRGGF Trigger: GAACCCGCCCCGGGTTCCTTCACCGAGGCTCCTCCCTAGGTCTCAGGGCCGGCGCTTTCCTCTGTTCCCGCCCGGCTCCTGCTGCCCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS TCA 90 bp | GGTGGGTCAATGGCACCTACTTCTGGACCTAGCAAGGCTGAGGTGTaGGAATCACTTGAGCCCAAGTCAGAGGTTGCAGTGAGCTATGAC | + |
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Preference number: 5 (lower is better) Translates to: GGSMAPTSGPSKAEV*ESLEPKSEVAVSYD Trigger: GTCATAGCTCACTGCAACCTCTGACTTGGGCTCAAGTGATTCTCACACCTCAGCCTTGCTAGGTCCAGAAGTAGGTGCCATTGACCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 90 bp | AAGAGAAGTGAAGCAGGAGTGGGGAGTAGAGGGAAGGTGGGTCAATaGCACCTACTTCTGGACCTAGCAAGGCTGAGGTGTGAGAATCAC | + |
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Preference number: 5 (lower is better) Translates to: KRSEAGVGSRGKVGQ*HLLLDLARLRCENH Trigger: GTGATTCTCACACCTCAGCCTTGCTAGGTCCAGAAGTAGGTGCCATTGACCCACCTTCCCTCTACTCCCCACTCCTGCTTCACTTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 90 bp | CTAGTTATATTCTCCTCTCACAAACTAGCCAATGCTGCCGCCTTATaGAAAGCCGACACCACGGAAAGATGTGCTTTACAGAGGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: LVIFSSHKLANAAAL*KADTTERCALQRQD Trigger: ATCCTGCCTCTGTAAAGCACATCTTTCCGTGGTGTCGGCTTTGCATAAGGCGGCAGCATTGGCTAGTTTGTGAGAGGAGAATATAACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 90 bp | TCTTCTCAGTCTAGTTATATTCTCCTCTCACAAACTAGCCAATGCTaGCGCCTTATGCAAAGCCGACACCACGGAAAGATGTGCTTTACA | + |
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Preference number: 5 (lower is better) Translates to: SSQSSYILLSQTSQC*RLMQSRHHGKMCFT Trigger: TGTAAAGCACATCTTTCCGTGGTGTCGGCTTTGCATAAGGCGGCAGCATTGGCTAGTTTGTGAGAGGAGAATATAACTAGACTGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 90 bp | CTATCTTCTCAGTCTAGTTATATTCTCCTCTCACAAACTAGCCAATaGTGCCGCCTTATGCAAAGCCGACACCACGGAAAGATGTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSSQSSYILLSQTSQ*CRLMQSRHHGKMCF Trigger: AAAGCACATCTTTCCGTGGTGTCGGCTTTGCATAAGGCGGCAGCATTGGCTAGTTTGTGAGAGGAGAATATAACTAGACTGAGAAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 90 bp | GGTGGTCACAGATATTTTATAATGGAGGCAAGGTCAAACCGGAATTaGAGTCCCATAGCTCTGAGCCCAGGAAACTGGATGAATTTATCT | + |
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Preference number: 5 (lower is better) Translates to: GGHRYFIMEARSNRN*SPIALSPGNWMNLS Trigger: AGATAAATTCATCCAGTTTCCTGGGCTCAGAGCTATGGGACTCCAATTCCGGTTTGACCTTGCCTCCATTATAAAATATCTGTGACCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 90 bp | GATTCTCATGTGTATTTCAGAGCTACTGAAAGTAGTCCTAGGTTGTaGAGGGAGAAATCCACTTTCACAGCTGAGTCTATCTTCTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: DSHVYFRATESSPRL*REKSTFTAESIFSV Trigger: GACTGAGAAGATAGACTCAGCTGTGAAAGTGGATTTCTCCCTCCACAACCTAGGACTACTTTCAGTAGCTCTGAAATACACATGAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 90 bp | TTCTGGGTTAATTTGGTTAGAAGTTTTGGGATCACGAACAGGAGGTaGTCACAGATATTTTATAATGGAGGCAAGGTCAAACCGGAATTG | + |
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Preference number: 5 (lower is better) Translates to: FWVNLVRSFGITNRR*SQIFYNGGKVKPEL Trigger: CAATTCCGGTTTGACCTTGCCTCCATTATAAAATATCTGTGACCACCTCCTGTTCGTGATCCCAAAACTTCTAACCAAATTAACCCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 90 bp | AAGAAAATTATAAGTAGGAGTCCAGTCACGAATTCATATCCAATCTaGTCAGTTATGACTTCCTCCAGCGAAAAGCCACACATCTTGCAA | + |
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Preference number: 5 (lower is better) Translates to: KKIISRSPVTNSYPI*SVMTSSSEKPHILQ Trigger: TTGCAAGATGTGTGGCTTTTCGCTGGAGGAAGTCATAACTGACCAGATTGGATATGAATTCGTGACTGGACTCCTACTTATAATTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS TCA 72 bp | CAGGAGCCGGGCGGGAACAGAGGAAAGCGCCGGCCCTaGGACCTAGGGAGGAGCCTCGGTGAAGGAACCCGG | + |
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Preference number: 6 (lower is better) Translates to: QEPGGNRGKRRP*DLGRSLGEGTR Trigger: CCGGGTTCCTTCACCGAGGCTCCTCCCTAGGTCTCAGGGCCGGCGCTTTCCTCTGTTCCCGCCCGGCTCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 72 bp | CCTCGGGTTTCCGCAGGGCGTCTCGAGAGCTGCGGATaGGGGCAGCAGGAGCCGGGCGGGAACAGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PRVSAGRLESCG*GQQEPGGNRGK Trigger: CTTTCCTCTGTTCCCGCCCGGCTCCTGCTGCCCCCATCCGCAGCTCTCGAGACGCCCTGCGGAAACCCGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 72 bp | GGAGGAGCCTCGGTGAAGGAACCCGGGGCGGGTTCCTaGCTAGATCTCCAAGAAGCTCCAAAAATGGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: GGASVKEPGAGS*LDLQEAPKMAG Trigger: GCCCGCCATTTTTGGAGCTTCTTGGAGATCTAGGCAGGAACCCGCCCCGGGTTCCTTCACCGAGGCTCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 72 bp | GTGAAAAGTTGTAAGCAGGTGAAAGGTAGGGATCCATaGCCACGGACGGGCAGGTGGAGATCAGGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VKSCKQVKGRDP*PRTGRWRSGKR Trigger: CCTCTTCCCTGATCTCCACCTGCCCGTCCGTGGCCATGGATCCCTACCTTTCACCTGCTTACAACTTTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS TCA 72 bp | ATGGCACCTACTTCTGGACCTAGCAAGGCTGAGGTGTaGGAATCACTTGAGCCCAAGTCAGAGGTTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: MAPTSGPSKAEV*ESLEPKSEVAV Trigger: CACTGCAACCTCTGACTTGGGCTCAAGTGATTCTCACACCTCAGCCTTGCTAGGTCCAGAAGTAGGTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 72 bp | TTCTCCTCTCACAAACTAGCCAATGCTGCCGCCTTATaGAAAGCCGACACCACGGAAAGATGTGCTTTACAG | + |
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Preference number: 6 (lower is better) Translates to: FSSHKLANAAAL*KADTTERCALQ Trigger: CTGTAAAGCACATCTTTCCGTGGTGTCGGCTTTGCATAAGGCGGCAGCATTGGCTAGTTTGTGAGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 72 bp | CAGTCTAGTTATATTCTCCTCTCACAAACTAGCCAATaGTGCCGCCTTATGCAAAGCCGACACCACGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QSSYILLSQTSQ*CRLMQSRHHGK Trigger: CTTTCCGTGGTGTCGGCTTTGCATAAGGCGGCAGCATTGGCTAGTTTGTGAGAGGAGAATATAACTAGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS GCA 72 bp | TCTAGTTATATTCTCCTCTCACAAACTAGCCAATGCTaGCGCCTTATGCAAAGCCGACACCACGGAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: SSYILLSQTSQC*RLMQSRHHGKM Trigger: CATCTTTCCGTGGTGTCGGCTTTGCATAAGGCGGCAGCATTGGCTAGTTTGTGAGAGGAGAATATAACTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 72 bp | AGATATTTTATAATGGAGGCAAGGTCAAACCGGAATTaGAGTCCCATAGCTCTGAGCCCAGGAAACTGGATG | + |
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Preference number: 6 (lower is better) Translates to: RYFIMEARSNRN*SPIALSPGNWM Trigger: CATCCAGTTTCCTGGGCTCAGAGCTATGGGACTCCAATTCCGGTTTGACCTTGCCTCCATTATAAAATATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CAA 72 bp | CAGATATTTTATAATGGAGGCAAGGTCAAACCGGAATaGGAGTCCCATAGCTCTGAGCCCAGGAAACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: QIFYNGGKVKPE*ESHSSEPRKLD Trigger: ATCCAGTTTCCTGGGCTCAGAGCTATGGGACTCCAATTCCGGTTTGACCTTGCCTCCATTATAAAATATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CAA 90 bp | AGGTGGTCACAGATATTTTATAATGGAGGCAAGGTCAAACCGGAATaGGAGTCCCATAGCTCTGAGCCCAGGAAACTGGATGAATTTATC | + |
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Preference number: 6 (lower is better) Translates to: RWSQIFYNGGKVKPE*ESHSSEPRKLDEFI Trigger: GATAAATTCATCCAGTTTCCTGGGCTCAGAGCTATGGGACTCCAATTCCGGTTTGACCTTGCCTCCATTATAAAATATCTGTGACCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 72 bp | GTGTATTTCAGAGCTACTGAAAGTAGTCCTAGGTTGTaGAGGGAGAAATCCACTTTCACAGCTGAGTCTATC | + |
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Preference number: 6 (lower is better) Translates to: VYFRATESSPRL*REKSTFTAESI Trigger: GATAGACTCAGCTGTGAAAGTGGATTTCTCCCTCCACAACCTAGGACTACTTTCAGTAGCTCTGAAATACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 72 bp | ATAAGTAGGAGTCCAGTCACGAATTCATATCCAATCTaGTCAGTTATGACTTCCTCCAGCGAAAAGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: ISRSPVTNSYPI*SVMTSSSEKPH Trigger: GTGTGGCTTTTCGCTGGAGGAAGTCATAACTGACCAGATTGGATATGAATTCGTGACTGGACTCCTACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CAA 72 bp | CATGTGTATTTCAGAGCTACTGAAAGTAGTCCTAGGTaGTGGAGGGAGAAATCCACTTTCACAGCTGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: HVYFRATESSPR*WREKSTFTAES Trigger: AGACTCAGCTGTGAAAGTGGATTTCTCCCTCCACAACCTAGGACTACTTTCAGTAGCTCTGAAATACACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CAA 90 bp | ACTGGGACTGGCATCTTTAACAACATGGAAAGCTTGAAACAGTCTTaGTGGAAAATAGGAGATCAGCCAGAGATTAGAAGAAAACGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TGTGIFNNMESLKQS*WKIGDQPEIRRKRK Trigger: CTTGCGTTTTCTTCTAATCTCTGGCTGATCTCCTATTTTCCACAAAGACTGTTTCAAGCTTTCCATGTTGTTAAAGATGCCAGTCCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS TCA 72 bp | TTTAAGTGTTTGAGCTGCAGCTTTCTGGCAAGTAGCTaGACACGAGGAAACTCAGTTAAGGAAAAATCAAGA | + |
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Preference number: 6 (lower is better) Translates to: FKCLSCSFLASS*TRGNSVKEKSR Trigger: TCTTGATTTTTCCTTAACTGAGTTTCCTCGTGTTCAGCTACTTGCCAGAAAGCTGCAGCTCAAACACTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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| CDS CCA 72 bp | AATTTGGTTAGAAGTTTTGGGATCACGAACAGGAGGTaGTCACAGATATTTTATAATGGAGGCAAGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: NLVRSFGITNRR*SQIFYNGGKVK Trigger: TTTGACCTTGCCTCCATTATAAAATATCTGTGACCACCTCCTGTTCGTGATCCCAAAACTTCTAACCAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564748.1 |
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