RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST8SIA6 (Homo sapiens)

Ensembl gene IDs: ENSG00000148488

Ensembl transcript IDs: ENST00000377602.5, ENST00000440449.5, ENST00000648997.1

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACCATGAGAAATATTCTTGCCTTTCCACTCTCAGGAGGGTACTGGTaGCACTGTTCCTCGCTATGGGATCAGCCTTCTGAAGCCACATGT +
Preference number: 1 (lower is better)
Translates to: TMRNILAFPLSGGYW*HCSSLWDQPSEATC
Trigger: ACATGTGGCTTCAGAAGGCTGATCCCATAGCGAGGAACAGTGTCACCAGTACCCTCCTGAGAGTGGAAAGGCAAGAATATTTCTCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 90 bp TTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGGTATaGAGTCACACCTTTAGTTCTCCAGAAAAGGGCCAGATCTTTCAG +
Preference number: 1 (lower is better)
Translates to: FHCNTCDHQAGGQAV*SHTFSSPEKGQIFQ
Trigger: CTGAAAGATCTGGCCCTTTTCTGGAGAACTAAAGGTGTGACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR GCA 90 bp AGTTCCACAGAGAGACTTATTCAGAATTCCCCCATTTCCGACCACTaGACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGG +
Preference number: 1 (lower is better)
Translates to: SSTERLIQNSPISDH*TLIIRVVHKRLGHW
Trigger: CCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAATAAGTCTCTCTGTGGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR GCA 90 bp GAAGGGCCAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTaGAACACTTGTGATCATCAAGCCGGTGGACAAGCGGTATGCAGT +
Preference number: 1 (lower is better)
Translates to: EGPESIQLHIFTQFH*NTCDHQAGGQAVCS
Trigger: ACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTGGCCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR GCA 90 bp ACATTATTGGCACCTCACAGCAGGATATATGGAAGGTGGGATATATaGCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGT +
Preference number: 1 (lower is better)
Translates to: TLLAPHSRIYGRWDI*PTRKKMLGFNEALC
Trigger: ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCACCTTCCATATATCCTGCTGTGAGGTGCCAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR TCA 90 bp AAGGTGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATaGGGCACTGTGTCTTTTACTCCCTTTAGTTCTCTGCAACACACT +
Preference number: 1 (lower is better)
Translates to: KVGYMPYQEENVRIQ*GTVSFTPFSSLQHT
Trigger: AGTGTGTTGCAGAGAACTAAAGGGAGTAAAAGACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR TCA 90 bp ATTACCTGGCTGAGAGCCCACGCAGTTACTGGGTTAGGACTTACATaGAGAAGGAAATATCCTTTAGTGAAAGCCATGATCTATTTGTCA +
Preference number: 1 (lower is better)
Translates to: ITWLRAHAVTGLGLT*RRKYPLVKAMIYLS
Trigger: TGACAAATAGATCATGGCTTTCACTAAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTCAGCCAGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 90 bp AAAGACTTTTTGACTGATTACCTGGCTGAGAGCCCACGCAGTTACTaGGTTAGGACTTACATGAAGAAGGAAATATCCTTTAGTGAAAGC +
Preference number: 1 (lower is better)
Translates to: KDFLTDYLAESPRSY*VRTYMKKEISFSES
Trigger: GCTTTCACTAAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTCAGCCAGGTAATCAGTCAAAAAGTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 90 bp GGGAAAAGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTaGGCAAAAATTAACACTATGCAATTGATCATGAAGCCCTTTGCA +
Preference number: 1 (lower is better)
Translates to: GKSTRDFKDVRGLLH*AKINTMQLIMKPFA
Trigger: TGCAAAGGGCTTCATGATCAATTGCATAGTGTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCTTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 90 bp GGGAAGGATATTATTGATAGAGACCTGCCACAGAAAGAAATCCAATaGATACTGGTAATGCAGCTATTCTCTTTAGAAGAGATCTCCAAG +
Preference number: 1 (lower is better)
Translates to: GKDIIDRDLPQKEIQ*ILVMQLFSLEEISK
Trigger: CTTGGAGATCTCTTCTAAAGAGAATAGCTGCATTACCAGTATCCATTGGATTTCTTTCTGTGGCAGGTCTCTATCAATAATATCCTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
3UTR CCA 90 bp AACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAAGGTaGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAG +
Preference number: 1 (lower is better)
Translates to: NKRTLLAPHSRIYGR*DICPTRKKMLGFNE
Trigger: CTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCACCTTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 90 bp AAGTTTGGCTCTAAAATTTGCATATTCTTCTGCTTGCCGTTTCCATaGACAACTCTGTATATCTGTGATAATCTGAAGGTAGTCGTTCTC +
Preference number: 1 (lower is better)
Translates to: KFGSKICIFFCLPFP*TTLYICDNLKVVVL
Trigger: GAGAACGACTACCTTCAGATTATCACAGATATACAGAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCAAATTTTAGAGCCAAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR TCA 90 bp AGCCCTTTGCAGGGACCACAGAGTACTATGGACTATATACTTAAATaGATATTTCTGCCTTGCCTTTGGATTTGGCTGAAAATTATATTG +
Preference number: 1 (lower is better)
Translates to: SPLQGPQSTMDYILK*IFLPCLWIWLKIIL
Trigger: CAATATAATTTTCAGCCAAATCCAAAGGCAAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCAAAGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 90 bp TATGCAATTGATCATGAAGCCCTTTGCAGGGACCACAGAGTACTATaGACTATATACTTAAATGAATATTTCTGCCTTGCCTTTGGATTT +
Preference number: 1 (lower is better)
Translates to: YAIDHEALCRDHRVL*TIYLNEYFCLAFGF
Trigger: AAATCCAAAGGCAAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCAAAGGGCTTCATGATCAATTGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR TCA 90 bp TTTTCTCCTAAGCTTTTACTGGAACATGGGTATCACTATGCTGTTTaGTCTCACACCATTTGGAATATTTCTGAAATCCATATCAGTGAT +
Preference number: 1 (lower is better)
Translates to: FSPKLLLEHGYHYAV*SHTIWNISEIHISD
Trigger: ATCACTGATATGGATTTCAGAAATATTCCAAATGGTGTGAGATCAAACAGCATAGTGATACCCATGTTCCAGTAAAAGCTTAGGAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 90 bp ATCACAGCTACTATTAAAAGTGAATTTAATCAGAAGCAGGCATACTaGCATACTCAGAGAAGAATTTCATTCCCGAATGATCAAGAACTT +
Preference number: 1 (lower is better)
Translates to: ITATIKSEFNQKQAY*HTQRRISFPNDQEL
Trigger: AAGTTCTTGATCATTCGGGAATGAAATTCTTCTCTGAGTATGGCAGTATGCCTGCTTCTGATTAAATTCACTTTTAATAGTAGCTGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR TCA 90 bp AGAGAAGGGCCAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTGCAACTACCCGTGTTGGCCCTaGAGGAAAATGCTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: REGPESIQLHIFTQFHCNYPCWP*RKMLAE
Trigger: TTCTGCCAGCATTTTCCTTCAGGGCCAACACGGGTA...GTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTGGCCCTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CCA 90 bp TCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGGTATGCAGTCACATCATTGCAAAATGAGTaGGGAAGCTTTGGTCAAACC +
Preference number: 2 (lower is better)
Translates to: STATLVIIKPVDKRYAVTSLQNE*GSFGQT
Trigger: GGTTTGACCAAAGCTTCCCCACTCATTTTGCAATGA...TGTGACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR TCA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATGCCATCATTGCAAAATaGGTGGGGAAGCTTTGGTCA +
Preference number: 2 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHAIIAK*VGKLWS
Trigger: TGACCAAAGCTTCCCCACTCATTTTGCAATGATGGC...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR GCA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTCCTGGCCTAAAGGGCTaGTCTTGTCTAGTACCAGAA +
Preference number: 2 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFPGLKG*SCLVPE
Trigger: TTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGG...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CCA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCGTGAGCCATTGCGCCTaGCCTAAAGGGCTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: VILFHCSMRLNNKWKIESVSHCA*PKGLLL
Trigger: CAAGAGCAGCCCTTTAGGCCAGGCGCAATGGCTCAC...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR TCA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTAACCCCAATCTGCTGTaGAATCACAACTATAGACCC +
Preference number: 2 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFNPNLL*NHNYRP
Trigger: GGGTCTATAGTTGTGATTTCACAGCAGATTGGGGTT...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR TCA 90 bp CAGTTCCACAGAGAGACTTATTCAGAATTCCCCCATTTCCGACCACTGCACACTGAAACAACAAAGTTTTaGACAGCATCACAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: QFHRETYSEFPHFRPLHTETTKF*TASQQE
Trigger: TTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTC...AGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAATAAGTCTCTCTGTGGAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR GCA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAATCTCACAGAGCCTGGTaGAGGGCCTGGCATGAAGTA +
Preference number: 2 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMESHRAW*RAWHEV
Trigger: TACTTCATGCCAGGCCCTGCACCAGGCTCTGTGAGA...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp CACAAGATTTGTTTTACTGCCAACATCTTTACTAACATCTCCTGTGGTTGGGGGGCATATTCTTCTGCTTaGCGTTTCCATGGACAACTC +
Preference number: 2 (lower is better)
Translates to: HKICFTANIFTNISCGWGAYSSA*RFHGQL
Trigger: GAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGC...CCCCCAACCACAGGAGATGTTAGTAAAGATGTTGGCAGTAAAACAAATCTTGTG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR TCA 90 bp AGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTGCGCAAAAATTAACATAAAATTGAGTGAGTaGCCCCACAGGCAAGACAAC +
Preference number: 2 (lower is better)
Translates to: STRDFKDVRGLLHCAKINIKLSE*PHRQDN
Trigger: GTTGTCTTGCCTGTGGGGTCACTCACTCAATTTTAT...GTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCATCTCCAAGAAAGCATaGTTTTATTATCGGTCTGGT +
Preference number: 2 (lower is better)
Translates to: CFRLFERVVYFERGTRVGISKKA*FYYRSG
Trigger: ACCAGACCGATAATAAAAGCATGCTTTCTTGGAGAT...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CCA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATCATATTAGTCCCAACTaGAGTGTTATTCTGAGAAAC +
Preference number: 2 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHHISPN*SVILRN
Trigger: GTTTCTCAGAATAACACTCCAGTTGGGACTAATATG...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR CAA 90 bp GATGTTCGAGGATTATTACACTGCGCAAAAATTAACACTATGCAATaGATCATGAAGCCCTTTGCAGGGACCACAGAGTACTATGGACTA +
Preference number: 2 (lower is better)
Translates to: DVRGLLHCAKINTMQ*IMKPFAGTTEYYGL
Trigger: TAGTCCATAGTACTCTGTGGTCCCTGCAAAGGGCTTCATGATCAATTGCATAGTGTTAATTTTTGCGCAGTGTAATAATCCTCGAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 90 bp TTCACATTTGCTAAATTGCAGTTTGAGGATTCCTTTCATGTGAAGTaGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATG +
Preference number: 2 (lower is better)
Translates to: FTFAKLQFEDSFHVK*EDLAVFFGHLMETM
Trigger: CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATGAAAGGAATCCTCAAACTGCAATTTAGCAAATGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CCA 90 bp AGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTGCGCAAAAATTAACTCATTGCAAAATGAGTaGGGAAGCTTTGGTCAAACC +
Preference number: 2 (lower is better)
Translates to: STRDFKDVRGLLHCAKINSLQNE*GSFGQT
Trigger: GGTTTGACCAAAGCTTCCCCACTCATTTTGCAATGA...GTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CCA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTCTCCTAAGCTTTTACTaGAACATGGGTATCACTATG +
Preference number: 2 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSLLSFY*NMGITM
Trigger: CATAGTGATACCCATGTTCCAGTAAAAGCTTAGGAG...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CCA 90 bp ATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGTTCAGGTACTTGGGATaGAAAAATAGAACCTTTTGT +
Preference number: 2 (lower is better)
Translates to: IFTQFHCNTCDHQAGGQAFRYLG*KNRTFC
Trigger: ACAAAAGGTTCTATTTTTCCATCCCAAGTACCTGAA...CGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR CAA 90 bp ACAGCAGGAAGCAAGTTTGGCTCTAAAATTTGCATATTCTTCTGCTaGCCGTTTCCATGGACAACTCTGTATATCTGTGATAATCTGAAG +
Preference number: 2 (lower is better)
Translates to: TAGSKFGSKICIFFC*PFPWTTLYICDNLK
Trigger: CTTCAGATTATCACAGATATACAGAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCAAATTTTAGAGCCAAACTTGCTTCCTGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR TCA 90 bp GGTATCACTATGCTGTTTGATCTCACACCATTTGGAATATTTCTGAAATCCATAGCCATCATTGCAAAATaGGTGGGGAAGCTTTGGTCA +
Preference number: 2 (lower is better)
Translates to: GITMLFDLTPFGIFLKSIAIIAK*VGKLWS
Trigger: TGACCAAAGCTTCCCCACTCATTTTGCAATGATGGC...TATGGATTTCAGAAATATTCCAAATGGTGTGAGATCAAACAGCATAGTGATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR TCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTGTGCAGGGCCTGGCATaGAGTAGTTATTCAGTAATT +
Preference number: 2 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLVQGLA*SSYSVI
Trigger: AATTACTGAATAACTACTTCATGCCAGGCCCTGCAC...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 90 bp CATATTAGTCCCAACTGGAGTGTTATTCTGAGAAACAACAAAGTTTaGAACAGCATCACAGCAGGAAGCAAGTTTGGCTCTAAAATTTGC +
Preference number: 2 (lower is better)
Translates to: HISPNWSVILRNNKV*NSITAGSKFGSKIC
Trigger: GCAAATTTTAGAGCCAAACTTGCTTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCTCAGAATAACACTCCAGTTGGGACTAATATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR CAA 90 bp TCCCATTTTAAGATACTTTGTTTAGGCGACTTCACATTTGCTAAATaGCAGTTTGAGGATTCCTTTCATGTGAAGTTGGAGGATCTGGCT +
Preference number: 2 (lower is better)
Translates to: SHFKILCLGDFTFAK*QFEDSFHVKLEDLA
Trigger: AGCCAGATCCTCCAACTTCACATGAAAGGAATCCTCAAACTGCAATTTAGCAAATGTGAAGTCGCCTAAACAAAGTATCTTAAAATGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CCA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAAGGTCAAACCAAATTTTaGGGCTCATCTCAAAATACT +
Preference number: 2 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKGQTKF*GSSQNT
Trigger: AGTATTTTGAGATGAGCCCCAAAATTTGGTTTGACC...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
3UTR-3UTR CCA 90 bp AGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTGCGCAAAAATTAACTGTATGAGTCAGATATaGTGTCCATGTTATAAGGAG +
Preference number: 2 (lower is better)
Translates to: STRDFKDVRGLLHCAKINCMSQI*CPCYKE
Trigger: CTCCTTATAACATGGACACCATATCTGACTCATACA...GTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CCA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTTTTCTGCCTTGCCTTTaGATTTGGCTGAAAATTATA +
Preference number: 2 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSFLPCL*IWLKII
Trigger: TATAATTTTCAGCCAAATCCAAAGGCAAGGCAGAAA...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATACAGAAGCAGGCATACTaGCATACTCAGAGAAGAATT +
Preference number: 2 (lower is better)
Translates to: SSKSARQEMSTDSKIPFIQKQAY*HTQRRI
Trigger: AATTCTTCTCTGAGTATGGCAGTATGCCTGCTTCTG...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATACTCCCTTTAGTTCTCTaGAACACACTGACTATGCTA +
Preference number: 2 (lower is better)
Translates to: SSKSARQEMSTDSKIPFILPLVL*NTLTML
Trigger: TAGCATAGTCAGTGTGTTGCAGAGAACTAAAGGGAG...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATACATGAGAAATATTCTTaGCTTTCCACTCTCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SSKSARQEMSTDSKIPFIHEKYS*LSTLRR
Trigger: CCTCCTGAGAGTGGAAAGGCAAGAATATTTCTCATG...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp AAGATACTTTGTTTAGGCGACTTCACATTTGCTAAATTGCAGTTTGAGGATTCCATTTGCATATTCTTCTaGTTGCCGTTTCCATGGACA +
Preference number: 2 (lower is better)
Translates to: KILCLGDFTFAKLQFEDSICIFF*LPFPWT
Trigger: TGTCCATGGAAACGGCAAGCAGAAGAATATGCAAAT...GGAATCCTCAAACTGCAATTTAGCAAATGTGAAGTCGCCTAAACAAAGTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR TCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTATGAGAAGGATTGAATaGCTTGCCATCATTGCAAAA +
Preference number: 2 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLMRRIE*LAIIAK
Trigger: TTTTGCAATGATGGCAAGTCATTCAATCCTTCTCAT...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR GCA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAAATCTCCAAGAAAGCATaGTTTTATTATCGGTCTGGT +
Preference number: 2 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMEISKKA*FYYRSG
Trigger: ACCAGACCGATAATAAAAGCATGCTTTCTTGGAGAT...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CCA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCCAGAAAGAAATCCAATaGATACTGGTAATGCAGCTA +
Preference number: 2 (lower is better)
Translates to: VILFHCSMRLNNKWKIESQKEIQ*ILVMQL
Trigger: TAGCTGCATTACCAGTATCCATTGGATTTCTTTCTG...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 72 bp AACACTTGTGATCATCAAGCCGGTGGACAAGCGGTATaGAGTCACACCTTTAGTTCTCCAGAAAAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: NTCDHQAGGQAV*SHTFSSPEKGQ
Trigger: CTGGCCCTTTTCTGGAGAACTAAAGGTGTGACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp TCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGGTATGCAGTCACAATGAGTGGGGAAGCTTaGGTCAAACCAAATTTTGGG +
Preference number: 3 (lower is better)
Translates to: STATLVIIKPVDKRYAVTMSGEA*VKPNFG
Trigger: CCCAAAATTTGGTTTGACCAAAGCTTCCCCACTCAT...TGTGACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR TCA 72 bp AATATTCTTGCCTTTCCACTCTCAGGAGGGTACTGGTaGCACTGTTCCTCGCTATGGGATCAGCCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: NILAFPLSGGYW*HCSSLWDQPSE
Trigger: TTCAGAAGGCTGATCCCATAGCGAGGAACAGTGTCACCAGTACCCTCCTGAGAGTGGAAAGGCAAGAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR TCA 72 bp GCTTCACATTTTTACACAGTTCCACTGCAACACTTGTaGTCATCAAGCCGGTGGACAAGCGGTATGCAGTCA +
Preference number: 3 (lower is better)
Translates to: ASHFYTVPLQHL*SSSRWTSGMQS
Trigger: TGACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR GCA 72 bp GAGAGACTTATTCAGAATTCCCCCATTTCCGACCACTaGACACTGATTATAAGGGTAGTCCACAAAAGGCTG +
Preference number: 3 (lower is better)
Translates to: ERLIQNSPISDH*TLIIRVVHKRL
Trigger: CAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAATAAGTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR GCA 72 bp GAATCCATACAGCTTCACATTTTTACACAGTTCCACTaGAACACTTGTGATCATCAAGCCGGTGGACAAGCG +
Preference number: 3 (lower is better)
Translates to: ESIQLHIFTQFH*NTCDHQAGGQA
Trigger: CGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp CACATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAACACCTCCTTTGGTGTTaGGAGACATTGTTAATCACC +
Preference number: 3 (lower is better)
Translates to: HIFTQFHCNTCDHQAGGQHLLWC*ETLLIT
Trigger: GGTGATTAACAATGTCTCCAAACACCAAAGGAGGTG...TTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp AGAGAAGGGCCAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTGCAACTGCATATTCTTCTGCTaGCCGTTTCCATGGACAACT +
Preference number: 3 (lower is better)
Translates to: REGPESIQLHIFTQFHCNCIFFC*PFPWTT
Trigger: AGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCA...GTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTGGCCCTTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR TCA 72 bp CTGAGAGCCCACGCAGTTACTGGGTTAGGACTTACATaGAGAAGGAAATATCCTTTAGTGAAAGCCATGATC +
Preference number: 3 (lower is better)
Translates to: LRAHAVTGLGLT*RRKYPLVKAMI
Trigger: GATCATGGCTTTCACTAAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 72 bp GCACCTCACAGCAGGATATATGGAAGGTGGGATATATaGCCTACCAGGAAGAAAATGTTAGGATTCAATGAG +
Preference number: 3 (lower is better)
Translates to: APHSRIYGRWDI*PTRKKMLGFNE
Trigger: CTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCACCTTCCATATATCCTGCTGTGAGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 72 bp TTGACTGATTACCTGGCTGAGAGCCCACGCAGTTACTaGGTTAGGACTTACATGAAGAAGGAAATATCCTTT +
Preference number: 3 (lower is better)
Translates to: LTDYLAESPRSY*VRTYMKKEISF
Trigger: AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTCAGCCAGGTAATCAGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp ATTCAGAATTCCCCCATTTCCGACCACTGCACACTGATTATAAGGGTAGTCCACTGGTGTTTGGAGACATaGTTAATCACCTACTGCATT +
Preference number: 3 (lower is better)
Translates to: IQNSPISDHCTLIIRVVHWCLET*LITYCI
Trigger: AATGCAGTAGGTGATTAACAATGTCTCCAAACACCA...GTGGACTACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAATGGTCAAACCAAATTTaGGGGCTCATCTCAAAATAC +
Preference number: 3 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQWSNQI*GLISKY
Trigger: GTATTTTGAGATGAGCCCCAAAATTTGGTTTGACCA...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTAATGACTTGCCATCATaGCAAAATGAGTGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: WDICPTRKKMLGFNEALCNDLPS*QNEWGS
Trigger: GCTTCCCCACTCATTTTGCAATGATGGCAAGTCATT...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCGAAGGATTGAATGACTaGCCATCATTGCAAAATGAG +
Preference number: 3 (lower is better)
Translates to: CFRLFERVVYFERGTRVGEGLND*PSLQNE
Trigger: CTCATTTTGCAATGATGGCAAGTCATTCAATCCTTC...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGAGAAAGAAATATTCTTaGAGTCCCTACCTCACACCA +
Preference number: 3 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMRKKYS*SPYLTP
Trigger: TGGTGTGAGGTAGGGACTCAAAGAATATTTCTTTCT...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGAGAAACAACAAAGTTTaGAACAGCATCACAGCAGGA +
Preference number: 3 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMRNNKV*NSITAG
Trigger: TCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCT...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR CCA 72 bp GGGGCTCATCTCAAAATACTCTTTAGCCACCTCCTTTaGTGTTTGGAGACATTGTTAATCACCTACTGCATT +
Preference number: 3 (lower is better)
Translates to: GAHLKILFSHLL*CLETLLITYCI
Trigger: AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAGTATTTTGAGATGAGCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
3UTR CCA 72 bp ACATTATTGGCACCTCACAGCAGGATATATGGAAGGTaGGATATATGCCCTACCAGGAAGAAAATGTTAGGA +
Preference number: 3 (lower is better)
Translates to: TLLAPHSRIYGR*DICPTRKKMLG
Trigger: TCCTAACATTTTCTTCCTGGTAGGGCATATATCCCACCTTCCATATATCCTGCTGTGAGGTGCCAATAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp CACATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAATGGTCAAACCAAATTTaGGGGCTCATCTCAAAATAC +
Preference number: 3 (lower is better)
Translates to: HIFTQFHCNTCDHQAGGQWSNQI*GLISKY
Trigger: GTATTTTGAGATGAGCCCCAAAATTTGGTTTGACCA...TTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAAATGAGTGGGGAAGCTTaGGTCAAACCAAATTTTGGG +
Preference number: 3 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKMSGEA*VKPNFG
Trigger: CCCAAAATTTGGTTTGACCAAAGCTTCCCCACTCAT...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
3UTR CCA 72 bp CAAAAGAACATTATTGGCACCTCACAGCAGGATATATaGAAGGTGGGATATATGCCCTACCAGGAAGAAAAT +
Preference number: 3 (lower is better)
Translates to: QKNIIGTSQQDI*KVGYMPYQEEN
Trigger: ATTTTCTTCCTGGTAGGGCATATATCCCACCTTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 72 bp TACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTaGTTGTGGCGAATCTACAAATCTACAAGATGGAGT +
Preference number: 3 (lower is better)
Translates to: YIQISWECHSQT*LWRIYKSTRWS
Trigger: ACTCCATCTTGTAGATTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAACACCTCCTTTGGTGTTaGGAGACATTGTTAATCACC +
Preference number: 3 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMEHLLWC*ETLLIT
Trigger: GGTGATTAACAATGTCTCCAAACACCAAAGGAGGTG...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp GAAGTCGGATTTATCTATTTCAGTTCCACAGAGAGACTTATTCAGAATTCCCCCCAGCAGGAAGCAAGTTaGGCTCTAAAATTTGCATAT +
Preference number: 3 (lower is better)
Translates to: EVGFIYFSSTERLIQNSPQQEAS*ALKFAY
Trigger: ATATGCAAATTTTAGAGCCAAACTTGCTTCCTGCTG...GGGGGAATTCTGAATAAGTCTCTCTGTGGAACTGAAATAGATAAATCCGACTTC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR TCA 72 bp TATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATaGGGCACTGTGTCTTTTACTCCCTTTAGTTCTCTG +
Preference number: 3 (lower is better)
Translates to: YMPYQEENVRIQ*GTVSFTPFSSL
Trigger: CAGAGAACTAAAGGGAGTAAAAGACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 72 bp GATCAGAACAGGTCCTCTTGGCTGTATATGCAAAAGTaGAATTACTGGACTATAGGACAGACATATGATGAA +
Preference number: 3 (lower is better)
Translates to: DQNRSSWLYMQK*NYWTIGQTYDE
Trigger: TTCATCATATGTCTGTCCTATAGTCCAGTAATTGCACTTTTGCATATACAGCCAAGAGGACCTGTTCTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAAATGGGAAGGATATTATaGATAGAGACCTGCCACAGA +
Preference number: 3 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMEMGRIL*IETCHR
Trigger: TCTGTGGCAGGTCTCTATCAATAATATCCTTCCCAT...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR TCA 72 bp CCAAAACCAGGAGATAGTAAAATGTTCATCAACAAATaGGCAGATAAGCCAACTGTGGTCCATCCATATAAC +
Preference number: 3 (lower is better)
Translates to: PKPGDSKMFINK*ADKPTVVHPYN
Trigger: GTTATATGGATGGACCACAGTTGGCTTATCTGCTCATTTGTTGATGAACATTTTACTATCTCCTGGTTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 72 bp GCAAGTTTGGCTCTAAAATTTGCATATTCTTCTGCTTaGCGTTTCCATGGACAACTCTGTATATCTGTGATA +
Preference number: 3 (lower is better)
Translates to: ASLALKFAYSSA*RFHGQLCISVI
Trigger: TATCACAGATATACAGAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCAAATTTTAGAGCCAAACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR TCA 72 bp GATTACCCTCTTCTTAATGGGTACCCTTCTTGTATTTaGCACGTAGCCTTGAATATGTTTGTATGTATGCAT +
Preference number: 3 (lower is better)
Translates to: DYPLLNGYPSCI*HVALNMFVCMH
Trigger: ATGCATACATACAAACATATTCAAGGCTACGTGTCAAATACAAGAAGGGTACCCATTAAGAAGAGGGTAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR GCA 72 bp ACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTaGGCAAAAATTAACACTATGCAATTGATCATGAAG +
Preference number: 3 (lower is better)
Translates to: TRDFKDVRGLLH*AKINTMQLIMK
Trigger: CTTCATGATCAATTGCATAGTGTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 72 bp TTTGCTTTCCACCTCGTAACTCATATTAGTCCCAACTaGAGTGTTATTCTGAGAAACAACAAAGTTTTGAAC +
Preference number: 3 (lower is better)
Translates to: FAFHLVTHISPN*SVILRNNKVLN
Trigger: GTTCAAAACTTTGTTGTTTCTCAGAATAACACTCCAGTTGGGACTAATATGAGTTACGAGGTGGAAAGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR-3UTR CAA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAGGATTGAATGACTaGCCATCATTGCAAAATGAG +
Preference number: 3 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVEGLND*PSLQNE
Trigger: CTCATTTTGCAATGATGGCAAGTCATTCAATCCTTC...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGAGAAAGAAATATTCTTaGAGTCCCTACCTCACACCA +
Preference number: 3 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVRKKYS*SPYLTP
Trigger: TGGTGTGAGGTAGGGACTCAAAGAATATTTCTTTCT...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR-3UTR CAA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATAGTATCTCACTTTCATTaGCATTTCTCAGGTTACTGG +
Preference number: 3 (lower is better)
Translates to: SSKSARQEMSTDSKIPFIVSHFH*HFSGYW
Trigger: CCAGTAACCTGAGAAATGCAAATGAAAGTGAGATAC...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CCA 72 bp TCTAAAATTTGCATATTCTTCTGCTTGCCGTTTCCATaGACAACTCTGTATATCTGTGATAATCTGAAGGTA +
Preference number: 3 (lower is better)
Translates to: SKICIFFCLPFP*TTLYICDNLKV
Trigger: TACCTTCAGATTATCACAGATATACAGAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCAAATTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR GCA 72 bp ACTATTAAAAGTGAATTTAATCAGAAGCAGGCATACTaGCATACTCAGAGAAGAATTTCATTCCCGAATGAT +
Preference number: 3 (lower is better)
Translates to: TIKSEFNQKQAY*HTQRRISFPND
Trigger: ATCATTCGGGAATGAAATTCTTCTCTGAGTATGGCAGTATGCCTGCTTCTGATTAAATTCACTTTTAATAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp GCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTAGCGCCGCGATCGGCTaGCAGATGACGATTCGCCGA +
Preference number: 4 (lower is better)
Translates to: APGLKGCSCLVPELRLSISAAIG*QMTIRR
Trigger: TCGGCGAATCGTCATCTGCCAGCCGATCGCGGCGCT...AATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp AGAGAAGGGCCAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTGCAACGCTGCGGGGGTGCCGTaGGTGGCCTCCCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: REGPESIQLHIFTQFHCNAAGVP*VASLLS
Trigger: GGAAAGCAGGGAGGCCACCCACGGCACCCCCGCAGC...GTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTGGCCCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTGCAGCAGCAGCAGGCTaGCGAGCAGGGCGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFAAAAG*RAGRAV
Trigger: CACTGCTCGCCCTGCTCGCCAGCCTGCTGCTGCTGC...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TATTCTGAGAAACAACAAAGTTTTGAACAGCATCACAGCAGGAAGCAAGTTTGGTCAGCGCTGCGGGGGTaGCGTGGGTGGCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YSEKQQSFEQHHSRKQVWSALRG*RGWPPC
Trigger: GCAGGGAGGCCACCCACGGCACCCCCGCAGCGCTGA...CCAAACTTGCTTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCTCAGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTCCTCCTGGGCTCCAGTaGACCTCCCTCCTTAGCCTC +
Preference number: 4 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFPPGLQ*TSLLSL
Trigger: GAGGCTAAGGAGGGAGGTTCACTGGAGCCCAGGAGG...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAGCTGCGGGGGTGCCGTaGGTGGCCTCCCTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: YEISGCLFSQRFLANVNLAAGVP*VASLLS
Trigger: GGAAAGCAGGGAGGCCACCCACGGCACCCCCGCAGC...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGTCAGCGCTGCGGGGGTaGCGTGGGTGGCCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVSALRG*RGWPPC
Trigger: GCAGGGAGGCCACCCACGGCACCCCCGCAGCGCTGA...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAAGTGAGCCATTGCGCCTaGCCTAAAGGGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQVSHCA*PKGLLL
Trigger: CAAGAGCAGCCCTTTAGGCCAGGCGCAATGGCTCAC...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR TCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCAGGATTCCTTTCATGTaGAGTTGGAGGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSRIPFM*SWRIWL
Trigger: CAGCCAGATCCTCCAACTTCACATGAAAGGAATCCT...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCAGATTAGGAATTTTCTaGGGACGAGGGTGGGATGGA +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSRLGIF*GRGWDG
Trigger: TCCATCCCACCCTCGTCCCCAGAAAATTCCTAATCT...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTCGATCGGCTGGCAGATaGCGATTCGCCGAGCTCGCC +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLRSAGR*RFAELA
Trigger: GGCGAGCTCGGCGAATCGTCATCTGCCAGCCGATCG...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp GCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCCCATTTCCGACCACTaGACACTGATTATAAGGGTA +
Preference number: 4 (lower is better)
Translates to: APGLKGCSCLVPELRLSIPISDH*TLIIRV
Trigger: TACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGG...AATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CCA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTGTGAGCCATTGCGCCTaGCCTAAAGGGCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: WDICPTRKKMLGFNEALCVSHCA*PKGLLL
Trigger: CAAGAGCAGCCCTTTAGGCCAGGCGCAATGGCTCAC...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp GCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCAGAAGCAGGCATACTaGCATACTCAGAGAAGAATT +
Preference number: 4 (lower is better)
Translates to: APGLKGCSCLVPELRLSIQKQAY*HTQRRI
Trigger: AATTCTTCTCTGAGTATGGCAGTATGCCTGCTTCTG...AATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGAAGATCACAGCTCACTaGAGCCTCTACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWKITAH*SLYLLG
Trigger: GCCCAGGAGGTAGAGGCTGCAGTGAGCTGTGATCTT...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGTACCCGTGTTGGCCCTaGAGGAAAATGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWYPCWP*RKMLAE
Trigger: TTCTGCCAGCATTTTCCTTCAGGGCCAACACGGGTA...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR TCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTCCACTGCAACACTTGTaGTCATCAAGCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIPLQHL*SSSRWT
Trigger: TGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGG...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR TCA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGAGGATTCCTTTCATGTaGAGTTGGAGGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMRIPFM*SWRIWL
Trigger: CAGCCAGATCCTCCAACTTCACATGAAAGGAATCCT...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCGCCATCATTGCAAAATaGGTGGGGAAGCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: CFRLFERVVYFERGTRVGAIIAK*VGKLWS
Trigger: TGACCAAAGCTTCCCCACTCATTTTGCAATGATGGC...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCTTATTATCGGTCTGGTaGAGGTGGAGATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: CFRLFERVVYFERGTRVGLLSVW*RWRWLV
Trigger: TACCAGCCATCTCCACCTTCACCAGACCGATAATAA...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTTTTGGGTCATGTTaGAGAAGTACAGTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSIFGSC*RSTVPH
Trigger: GTGAGGAACTGTACTTCTTCAACATGACCCAAAAAT...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCGTGCAAGACAAGAAATaGGTACAGACAGTAAGATTC +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSVQDKK*VQTVRF
Trigger: GAATCTTACTGTCTGTACTCATTTCTTGTCTTGCAC...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGGGTGGACAAGCGGTATaGAGTCACACCTTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMGGQAV*SHTFSS
Trigger: AGAACTAAAGGTGTGACTGCATACCGCTTGTCCACC...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCTTTGCACTTTTGTCTTaGTTTAGACTCTTCGAGCGT +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSFALLS*FRLFER
Trigger: ACGCTCGAAGAGTCTAAAGCAAGACAAAAGTGCAAA...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440449.5
CDS-3UTR CCA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAACACGTGCTTTTAGGATaGCAACACAGATGTCGAACC +
Preference number: 4 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQHVLLG*QHRCRT
Trigger: GGTTCGACATCTGTGTTGCCATCCTAAAAGCACGTG...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCTACATACAGATTTCTTaGGAGTGTCACAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSYIQIS*ECHSQT
Trigger: AGTCTGACTGTGACACTCCCAAGAAATCTGTATGTA...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTGCAGCCTCTACCTCCTaGGCTCCAGTGAACCTCCCT +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLAASTS*APVNLP
Trigger: AGGGAGGTTCACTGGAGCCCAGGAGGTAGAGGCTGC...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTCACTGTTCCTCGCTATaGGATCAGCCTTCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: WDICPTRKKMLGFNEALCHCSSL*DQPSEA
Trigger: GGCTTCAGAAGGCTGATCCCATAGCGAGGAACAGTG...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp GCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTAGAGACAGATATCTGTaGGTCCAATTTGTCTACTTA +
Preference number: 4 (lower is better)
Translates to: APGLKGCSCLVPELRLSIRDRYL*VQFVYL
Trigger: TAAGTAGACAAATTGGACTCACAGATATCTGTCTCT...AATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCTTTGGCTCTAAAATTTaGATATTCTTCTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSFGSKI*IFFCLP
Trigger: CGGCAAGCAGAAGAATATGCAAATTTTAGAGCCAAA...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATCCCATTTCCGACCACTaGACACTGATTATAAGGGTA +
Preference number: 4 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHPISDH*TLIIRV
Trigger: TACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGG...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCCTGGCCTAAAGGGCTaGTCTTGTCTAGTACCAGAA +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWPGLKG*SCLVPE
Trigger: TTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGG...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCGGTCAAACCAAATTTTaGGGCTCATCTCAAAATACT +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSGQTKF*GSSQNT
Trigger: AGTATTTTGAGATGAGCCCCAAAATTTGGTTTGACC...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp ATTGCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCCAGAAAGAAATCCAATaGATACTGGTAATGCAGCTA +
Preference number: 4 (lower is better)
Translates to: IAPGLKGCSCLVPELRLSQKEIQ*ILVMQL
Trigger: TAGCTGCATTACCAGTATCCATTGGATTTCTTTCTG...GGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAAGCGTGTAGTATACTTTaGAAGAGGTACCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: IQISWECHSQTWLWRIYKACSIL*KRYPCW
Trigger: CCAACACGGGTACCTCTTTCAAAGTATACTACACGC...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR TCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTGCCATCATTGCAAAATaGGTGGGGAAGCTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIAIIAK*VGKLWS
Trigger: TGACCAAAGCTTCCCCACTCATTTTGCAATGATGGC...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR TCA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAATCAGGAGGGTACTGGTaGCACTGTTCCTCGCTATGG +
Preference number: 4 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMESGGYW*HCSSLW
Trigger: CCATAGCGAGGAACAGTGTCACCAGTACCCTCCTGA...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTTCTCACAGAGCCTGGTaGAGGGCCTGGCATGAAGTA +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLSHRAW*RAWHEV
Trigger: TACTTCATGCCAGGCCCTGCACCAGGCTCTGTGAGA...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp GCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTAAAAGGCTGGGACACTaGAAACATATGAAAAATGTT +
Preference number: 4 (lower is better)
Translates to: APGLKGCSCLVPELRLSIKRLGH*KHMKNV
Trigger: AACATTTTTCATATGTTTCCAGTGTCCCAGCCTTTT...AATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCTCATTGCAAAATGAGTaGGGAAGCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: CFRLFERVVYFERGTRVGSLQNE*GSFGQT
Trigger: GGTTTGACCAAAGCTTCCCCACTCATTTTGCAATGA...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp CTGACTATAACACACTTTATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTACCCGTGTTGGCCCTaGAGGAAAATGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LTITHFMKSRGVCLAKDFYPCWP*RKMLAE
Trigger: TTCTGCCAGCATTTTCCTTCAGGGCCAACACGGGTA...AAAATCTTTGGCTAAACAGACACCCCGAGATTTCATAAAGTGTGTTATAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp CTGGAGTGTTATTCTGAGAAACAACAAAGTTTTGAACAGCATCACAGCAGGAAGGCGTGTAGTATACTTTaGAAGAGGTACCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LECYSEKQQSFEQHHSRKACSIL*KRYPCW
Trigger: CCAACACGGGTACCTCTTTCAAAGTATACTACACGC...CTTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCTCAGAATAACACTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp CTGACTATAACACACTTTATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTCCACTGCAACACTTGTaGTCATCAAGCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: LTITHFMKSRGVCLAKDFPLQHL*SSSRWT
Trigger: TGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGG...AAAATCTTTGGCTAAACAGACACCCCGAGATTTCATAAAGTGTGTTATAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGTATTCTTTGGGCATCTaGTGGAAACCATGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMYSLGI*WKPCLG
Trigger: ACCTAAACATGGTTTCCATCAGATGCCCAAAGAATA...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTAGGATATATGGAAGGTaGGATATATGCCCTACCAGG +
Preference number: 4 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSRIYGR*DICPTR
Trigger: CCTGGTAGGGCATATATCCCACCTTCCATATATCCT...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTTCACAGCAGGATATATaGAAGGTGGGATATATGCCC +
Preference number: 4 (lower is better)
Translates to: WDICPTRKKMLGFNEALCSQQDI*KVGYMP
Trigger: GGGCATATATCCCACCTTCCATATATCCTGCTGTGA...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAATACATACAGATTTCTTaGGAGTGTCACAGTCAGACT +
Preference number: 4 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQYIQIS*ECHSQT
Trigger: AGTCTGACTGTGACACTCCCAAGAAATCTGTATGTA...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CCA 90 bp AGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTGCGCAAAAATTAACAGCCCACGCAGTTACTaGGTTAGGACTTACATGAAG +
Preference number: 4 (lower is better)
Translates to: STRDFKDVRGLLHCAKINSPRSY*VRTYMK
Trigger: CTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCT...GTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp CCCAACTGGAGTGTTATTCTGAGAAACAACAAAGTTTaGAACAGCATCACAGCAGGAAGCAAGTTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PNWSVILRNNKV*NSITAGSKFGS
Trigger: AGAGCCAAACTTGCTTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCTCAGAATAACACTCCAGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAAAATGTTAGGATTCAATaGGGCACTGTGTCTTTTACT +
Preference number: 4 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQNVRIQ*GTVSFT
Trigger: AGTAAAAGACACAGTGCCTCATTGAATCCTAACATT...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CTGGAGTGTTATTCTGAGAAACAACAAAGTTTTGAACAGCATCACAGCAGGAAGGCATATTCTTCTGCTTaGCGTTTCCATGGACAACTC +
Preference number: 4 (lower is better)
Translates to: LECYSEKQQSFEQHHSRKAYSSA*RFHGQL
Trigger: GAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGC...CTTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCTCAGAATAACACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATTTTGGCTCTAAAATTTaGATATTCTTCTGCTTGCCG +
Preference number: 4 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHFGSKI*IFFCLP
Trigger: CGGCAAGCAGAAGAATATGCAAATTTTAGAGCCAAA...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTACATGGGTATCACTATaGTGTTTGATCTCACACCAT +
Preference number: 4 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFTWVSL*CLISHH
Trigger: ATGGTGTGAGATCAAACAGCATAGTGATACCCATGT...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAACATTTCTCCGTCAGTTaGAGCGACTTCTCATTCAGA +
Preference number: 4 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKHFSVS*SDFSFR
Trigger: TCTGAATGAGAAGTCGCTCCAACTGACGGAGAAATG...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CCA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAAGATCTTTCAGGTACTTaGGATGGAAAAATAGAACCT +
Preference number: 4 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQDLSGT*DGKIEP
Trigger: AGGTTCTATTTTTCCATCCCAAGTACCTGAAAGATC...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCGATCTTTCAGGTACTTaGGATGGAAAAATAGAACCT +
Preference number: 4 (lower is better)
Translates to: CFRLFERVVYFERGTRVGDLSGT*DGKIEP
Trigger: AGGTTCTATTTTTCCATCCCAAGTACCTGAAAGATC...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTTCTGGCTGTATTCTTTaGGCATCTGATGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSSGCIL*ASDGNH
Trigger: ATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGA...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTTCATTGCAAAATGAGTaGGGAAGCTTTGGTCAAACC +
Preference number: 4 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSSLQNE*GSFGQT
Trigger: GGTTTGACCAAAGCTTCCCCACTCATTTTGCAATGA...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATTGTATGAGTCAGATATaGTGTCCATGTTATAAGGAG +
Preference number: 4 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHCMSQI*CPCYKE
Trigger: CTCCTTATAACATGGACACCATATCTGACTCATACA...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp ATTCAGAATTCCCCCATTTCCGACCACTGCACACTGATTATAAGGGTAGTCCACCAGAAAGAAATCCAATaGATACTGGTAATGCAGCTA +
Preference number: 4 (lower is better)
Translates to: IQNSPISDHCTLIIRVVHQKEIQ*ILVMQL
Trigger: TAGCTGCATTACCAGTATCCATTGGATTTCTTTCTG...GTGGACTACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGTGTCACAGTCAGACTTaGTTGTGGCGAATCTACAAA +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWCHSQT*LWRIYK
Trigger: TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACA...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CCA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAAAAAGAAGAATGCTTCTaGAAGAGTGATGACCCAAAA +
Preference number: 4 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQKEECF*KSDDPK
Trigger: TTTTGGGTCATCACTCTTCCAGAAGCATTCTTCTTT...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp TTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTaGGTTGTGGCGAATCTACAAATCTACAAGATGGAG +
Preference number: 4 (lower is better)
Translates to: LHTDFLGVSQSD*VVANLQIYKME
Trigger: CTCCATCTTGTAGATTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp CACAAGATTTGTTTTACTGCCAACATCTTTACTAACATCTCCTGTGGTTGGGGGGAAACAACAAAGTTTTaGACAGCATCACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: HKICFTANIFTNISCGWGETTKF*TASQQE
Trigger: TTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTC...CCCCCAACCACAGGAGATGTTAGTAAAGATGTTGGCAGTAAAACAAATCTTGTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTTATTCTTTGGGCATCTaGTGGAAACCATGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: WDICPTRKKMLGFNEALCYSLGI*WKPCLG
Trigger: ACCTAAACATGGTTTCCATCAGATGCCCAAAGAATA...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAATTATTATCGGTCTGGTaGAGGTGGAGATGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMELLSVW*RWRWLV
Trigger: TACCAGCCATCTCCACCTTCACCAGACCGATAATAA...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAATAAAATTGAGTGAGTaGCCCCACAGGCAAGACAAC +
Preference number: 4 (lower is better)
Translates to: YEISGCLFSQRFLANVNLIKLSE*PHRQDN
Trigger: GTTGTCTTGCCTGTGGGGTCACTCACTCAATTTTAT...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGTACCCTTCTTGTATTTaGCACGTAGCCTTGAATATG +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWYPSCI*HVALNM
Trigger: CATATTCAAGGCTACGTGTCAAATACAAGAAGGGTA...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTATGTTCATCAACAAATaGGCAGATAAGCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSMFINK*ADKPTV
Trigger: CACAGTTGGCTTATCTGCTCATTTGTTGATGAACAT...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CACATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAACATATTGCAGATTTTTaGATTTCTCCGTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: HIFTQFHCNTCDHQAGGQHIADF*ISPSVG
Trigger: TCCAACTGACGGAGAAATGCAAAAATCTGCAATATG...TTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAGCATATTCTTCTGCTTaGCGTTTCCATGGACAACTC +
Preference number: 4 (lower is better)
Translates to: YEISGCLFSQRFLANVNLAYSSA*RFHGQL
Trigger: GAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGC...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTATTTGCATATTCTTCTaGTTGCCGTTTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIICIFF*LPFPWT
Trigger: TGTCCATGGAAACGGCAAGCAGAAGAATATGCAAAT...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR GCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTGGTGGACAAGCGGTATaGAGTCACACCTTTAGTTCT +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLGGQAV*SHTFSS
Trigger: AGAACTAAAGGTGTGACTGCATACCGCTTGTCCACC...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp AGAGAAGGGCCAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTGCAACTTTACACAGTTCCACTaGAACACTTGTGATCATCAA +
Preference number: 4 (lower is better)
Translates to: REGPESIQLHIFTQFHCNFTQFH*NTCDHQ
Trigger: TTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAA...GTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTGGCCCTTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCCAACAACCCCAATCTaGTGTGAAATCACAACTATA +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWPTTPI*CEITTI
Trigger: TATAGTTGTGATTTCACAGCAGATTGGGGTTGTTGG...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAACATGAGAAATATTCTTaGCTTTCCACTCTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKHEKYS*LSTLRR
Trigger: CCTCCTGAGAGTGGAAAGGCAAGAATATTTCTCATG...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAATCTGGCTGTATTCTTTaGGCATCTGATGGAAACCAT +
Preference number: 4 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKSGCIL*ASDGNH
Trigger: ATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGA...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTTCGTTTTCATCCCTCTaGAGCCCAACTTTTTATATG +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCISFSSL*SPTFYM
Trigger: CATATAAAAAGTTGGGCTCCAGAGGGATGAAAACGA...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGCGTGTAGTATACTTTaGAAGAGGTACCCGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVACSIL*KRYPCW
Trigger: CCAACACGGGTACCTCTTTCAAAGTATACTACACGC...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCGTGCAGGGCCTGGCATaGAGTAGTTATTCAGTAATT +
Preference number: 4 (lower is better)
Translates to: VILFHCSMRLNNKWKIESVQGLA*SSYSVI
Trigger: AATTACTGAATAACTACTTCATGCCAGGCCCTGCAC...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp CTGACTATAACACACTTTATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTAACCCCAATCTGCTGTaGAATCACAACTATAGACCC +
Preference number: 4 (lower is better)
Translates to: LTITHFMKSRGVCLAKDFNPNLL*NHNYRP
Trigger: GGGTCTATAGTTGTGATTTCACAGCAGATTGGGGTT...AAAATCTTTGGCTAAACAGACACCCCGAGATTTCATAAAGTGTGTTATAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp AAGATACTTTGTTTAGGCGACTTCACATTTGCTAAATTGCAGTTTGAGGATTCCTTAGCGTTTGTTCCGTaGTGCAGCACTTCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KILCLGDFTFAKLQFEDSLAFVP*CSTSFS
Trigger: ACTGAAAGAAGTGCTGCATCACGGAACAAACGCTAA...GGAATCCTCAAACTGCAATTTAGCAAATGTGAAGTCGCCTAAACAAAGTATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAAGACTCAATGCCATATTaGAGATTTTTGCATTTCTCC +
Preference number: 4 (lower is better)
Translates to: IQISWECHSQTWLWRIYKDSMPY*RFLHFS
Trigger: GGAGAAATGCAAAAATCTGCAATATGGCATTGAGTC...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp AGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTGCGCAAAAATTAACATTTGCATATTCTTCTaGTTGCCGTTTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: STRDFKDVRGLLHCAKINICIFF*LPFPWT
Trigger: TGTCCATGGAAACGGCAAGCAGAAGAATATGCAAAT...GTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTTTTACACAGTTCCACTaGAACACTTGTGATCATCAA +
Preference number: 4 (lower is better)
Translates to: WDICPTRKKMLGFNEALCFTQFH*NTCDHQ
Trigger: TTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAA...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTATCTCCAAGAAAGCATaGTTTTATTATCGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIISKKA*FYYRSG
Trigger: ACCAGACCGATAATAAAAGCATGCTTTCTTGGAGAT...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR GCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTGTAATGGTGAGTTACTaGAAGTTTTTCACCAAGATC +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIVMVSY*KFFTKI
Trigger: GATCTTGGTGAAAAACTTGCAGTAACTCACCATTAC...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTGGAAGGTGGGATATATaGCCTACCAGGAAGAAAATG +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLGRWDI*PTRKKM
Trigger: CATTTTCTTCCTGGTAGGGCATATATCCCACCTTCC...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTCATATTAGTCCCAACTaGAGTGTTATTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIHISPN*SVILRN
Trigger: GTTTCTCAGAATAACACTCCAGTTGGGACTAATATG...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CCA 90 bp CACAAGATTTGTTTTACTGCCAACATCTTTACTAACATCTCCTGTGGTTGGGGGCATATTAGTCCCAACTaGAGTGTTATTCTGAGAAAC +
Preference number: 4 (lower is better)
Translates to: HKICFTANIFTNISCGWGHISPN*SVILRN
Trigger: GTTTCTCAGAATAACACTCCAGTTGGGACTAATATG...CCCCCAACCACAGGAGATGTTAGTAAAGATGTTGGCAGTAAAACAAATCTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAAACAAAAGAACATTATTaGCACCTCACAGCAGGATAT +
Preference number: 4 (lower is better)
Translates to: IQISWECHSQTWLWRIYKTKEHY*HLTAGY
Trigger: ATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGT...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTaGTGGCGAATCTACAAATCTACAAGATGGAGTTTA +
Preference number: 4 (lower is better)
Translates to: IQISWECHSQTW*WRIYKSTRWSL
Trigger: TAAACTCCATCTTGTAGATTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAAATGAGAAGGATTGAATaGCTTGCCATCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKMRRIE*LAIIAK
Trigger: TTTTGCAATGATGGCAAGTCATTCAATCCTTCTCAT...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR TCA 90 bp CAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTGCAACACTTGTGATCATGAGAAGGATTGAATaGCTTGCCATCATTGCAAAA +
Preference number: 4 (lower is better)
Translates to: QNPYSFTFLHSSTATLVIMRRIE*LAIIAK
Trigger: TTTTGCAATGATGGCAAGTCATTCAATCCTTCTCAT...GATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATACCCATTTCCGACCACTaGACACTGATTATAAGGGTA +
Preference number: 4 (lower is better)
Translates to: SSKSARQEMSTDSKIPFIPISDH*TLIIRV
Trigger: TACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGG...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAACTCCCTTTAGTTCTCTaGAACACACTGACTATGCTA +
Preference number: 4 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMELPLVL*NTLTML
Trigger: TAGCATAGTCAGTGTGTTGCAGAGAACTAAAGGGAG...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTTTAAATGAATATTTCTaGCTTGCCTTTGGATTTGGC +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCILNEYF*LAFGFG
Trigger: GCCAAATCCAAAGGCAAGGCAGAAATATTCATTTAA...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTCGAGGATTATTACACTaGGCAAAAATTAACACTATG +
Preference number: 4 (lower is better)
Translates to: WDICPTRKKMLGFNEALCRGLLH*AKINTM
Trigger: CATAGTGTTAATTTTTGCGCAGTGTAATAATCCTCG...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCTGTATATGCAAAAGTaGAATTACTGGACTATAGGA +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWLYMQK*NYWTIG
Trigger: TCCTATAGTCCAGTAATTGCACTTTTGCATATACAG...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp CTGACTATAACACACTTTATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGTCACAGTCAGACTTaGTTGTGGCGAATCTACAAA +
Preference number: 4 (lower is better)
Translates to: LTITHFMKSRGVCLAKDFCHSQT*LWRIYK
Trigger: TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACA...AAAATCTTTGGCTAAACAGACACCCCGAGATTTCATAAAGTGTGTTATAGTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAAGGCTGAACAACAAGTaGAAAATAGAATCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: YEISGCLFSQRFLANVNLRLNNK*KIESSK
Trigger: CTTGCTGGATTCTATTTTCCACTTGTTGTTCAGCCT...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTCCTTGCCTTTGGATTTaGCTGAAAATTATATTGGAA +
Preference number: 4 (lower is better)
Translates to: LFSHLLWCLETLLITYCIPCLWI*LKIILE
Trigger: TTCCAATATAATTTTCAGCCAAATCCAAAGGCAAGG...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGTTTCTGCCTTGCCTTTaGATTTGGCTGAAAATTATA +
Preference number: 4 (lower is better)
Translates to: NADYIQISWECHSQTWLWFLPCL*IWLKII
Trigger: TATAATTTTCAGCCAAATCCAAAGGCAAGGCAGAAA...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAACAAAAGTGCAATTACTaGACTATAGGACAGACATAT +
Preference number: 4 (lower is better)
Translates to: IQISWECHSQTWLWRIYKQKCNY*TIGQTY
Trigger: ATATGTCTGTCCTATAGTCCAGTAATTGCACTTTTG...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp AGCACCAGAGACTTCAAGGATGTTCGAGGATTATTACACTGCGCAAAAATTAACATACATTGTCTTAATTaGAGAGACGGTTTCATGGGT +
Preference number: 4 (lower is better)
Translates to: STRDFKDVRGLLHCAKINIHCLN*RDGFMG
Trigger: ACCCATGAAACCGTCTCTCCAATTAAGACAATGTAT...GTTAATTTTTGCGCAGTGTAATAATCCTCGAACATCCTTGAAGTCTCTGGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp CTAAGTAATGTTCTGTTTTGGAACAAAAGAACATTATaGGCACCTCACAGCAGGATATATGGAAGGTGGGAT +
Preference number: 4 (lower is better)
Translates to: LSNVLFWNKRTL*APHSRIYGRWD
Trigger: ATCCCACCTTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAACATTACTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp AGCAAGTTTGGCTCTAAAATTTGCATATTCTTCTGCTaGCCGTTTCCATGGACAACTCTGTATATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SKFGSKICIFFC*PFPWTTLYICD
Trigger: ATCACAGATATACAGAGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCAAATTTTAGAGCCAAACTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR TCA 90 bp CTGACTATAACACACTTTATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTGAAACAACAAAGTTTTaGACAGCATCACAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LTITHFMKSRGVCLAKDFETTKF*TASQQE
Trigger: TTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTC...AAAATCTTTGGCTAAACAGACACCCCGAGATTTCATAAAGTGTGTTATAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR TCA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAGGGTTAGGACTTACATaGAGAAGGAAATATCCTTTA +
Preference number: 4 (lower is better)
Translates to: YEISGCLFSQRFLANVNLGLGLT*RRKYPL
Trigger: TAAAGGATATTTCCTTCTTCATGTAAGTCCTAACCC...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCCCTCTTGGCTGTATATaGAAAAGTGCAATTACTGGA +
Preference number: 4 (lower is better)
Translates to: VILFHCSMRLNNKWKIESPLGCI*KSAITG
Trigger: TCCAGTAATTGCACTTTTGCATATACAGCCAAGAGG...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp GAAGTCGGATTTATCTATTTCAGTTCCACAGAGAGACTTATTCAGAATTCCCCCAAAAGGCTGGGACACTaGAAACATATGAAAAATGTT +
Preference number: 4 (lower is better)
Translates to: EVGFIYFSSTERLIQNSPKRLGH*KHMKNV
Trigger: AACATTTTTCATATGTTTCCAGTGTCCCAGCCTTTT...GGGGGAATTCTGAATAAGTCTCTCTGTGGAACTGAAATAGATAAATCCGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp GAAGTCGGATTTATCTATTTCAGTTCCACAGAGAGACTTATTCAGAATTCCCCCTTCAGGTACTTGGGATaGAAAAATAGAACCTTTTGT +
Preference number: 4 (lower is better)
Translates to: EVGFIYFSSTERLIQNSPFRYLG*KNRTFC
Trigger: ACAAAAGGTTCTATTTTTCCATCCCAAGTACCTGAA...GGGGGAATTCTGAATAAGTCTCTCTGTGGAACTGAAATAGATAAATCCGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CCA 90 bp TATTCTGAGAAACAACAAAGTTTTGAACAGCATCACAGCAGGAAGCAAGTTTGGGGTCAAACCAAATTTTaGGGCTCATCTCAAAATACT +
Preference number: 4 (lower is better)
Translates to: YSEKQQSFEQHHSRKQVWGQTKF*GSSQNT
Trigger: AGTATTTTGAGATGAGCCCCAAAATTTGGTTTGACC...CCAAACTTGCTTCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCTCAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000648997.1
3UTR CAA 72 bp AGTGAGCCAATGTTTCAATATTATCTGCTAAAGAGTTaGCCCTGTCTCCATTACATAAGTAGCGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: SEPMFQYYLLKS*PCLHYISSASL
Trigger: TAAAGATGCGCTACTTATGTAATGGAGACAGGGCAAACTCTTTAGCAGATAATATTGAAACATTGGCTCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp AAGATACTTTGTTTAGGCGACTTCACATTTGCTAAATaGCAGTTTGAGGATTCCTTTCATGTGAAGTTGGAG +
Preference number: 4 (lower is better)
Translates to: KILCLGDFTFAK*QFEDSFHVKLE
Trigger: CTCCAACTTCACATGAAAGGAATCCTCAAACTGCAATTTAGCAAATGTGAAGTCGCCTAAACAAAGTATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR GCA 90 bp CTGACTATAACACACTTTATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTCATATTGCAGATTTTTaGATTTCTCCGTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LTITHFMKSRGVCLAKDFHIADF*ISPSVG
Trigger: TCCAACTGACGGAGAAATGCAAAAATCTGCAATATG...AAAATCTTTGGCTAAACAGACACCCCGAGATTTCATAAAGTGTGTTATAGTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAGGTTTCATGGGTATATaGATGTACATAAATATGTGC +
Preference number: 4 (lower is better)
Translates to: YEISGCLFSQRFLANVNLGFMGI*MYINMC
Trigger: GCACATATTTATGTACATGCATATACCCATGAAACC...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGCTCCTAAGCTTTTACTaGAACATGGGTATCACTATG +
Preference number: 4 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVLLSFY*NMGITM
Trigger: CATAGTGATACCCATGTTCCAGTAAAAGCTTAGGAG...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCAAGCTTCCTAATTCATaGAGTGATTTACGGTACTTG +
Preference number: 4 (lower is better)
Translates to: VILFHCSMRLNNKWKIESKLPNS*SDLRYL
Trigger: CAAGTACCGTAAATCACTCCATGAATTAGGAAGCTT...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGATCTCCAAGAAAGCATaGTTTTATTATCGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVISKKA*FYYRSG
Trigger: ACCAGACCGATAATAAAAGCATGCTTTCTTGGAGAT...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp GGTATCACTATGCTGTTTGATCTCACACCATTTGGAATATTTCTGAAATCCATAGTTATTCTGTTTCATTaGTCAATGAGGCTGAACAAC +
Preference number: 4 (lower is better)
Translates to: GITMLFDLTPFGIFLKSIVILFH*SMRLNN
Trigger: GTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC...TATGGATTTCAGAAATATTCCAAATGGTGTGAGATCAAACAGCATAGTGATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR GCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTACAGGTCTGATTTGCTaGTTAATTCTGTATTCTACA +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLTGLIC*LILYST
Trigger: TGTAGAATACAGAATTAAGCAGCAAATCAGACCTGT...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATATGTATGAGTCAGATATaGTGTCCATGTTATAAGGAG +
Preference number: 4 (lower is better)
Translates to: SSKSARQEMSTDSKIPFICMSQI*CPCYKE
Trigger: CTCCTTATAACATGGACACCATATCTGACTCATACA...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTGCCCAACTTTTTATATaGTGCAATGTAGGCATTTAT +
Preference number: 4 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLAQLFI*CNVGIY
Trigger: ATAAATGCCTACATTGCACCATATAAAAAGTTGGGC...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
3UTR CAA 72 bp CATCTCAAAATACTCTTTAGCCACCTCCTTTGGTGTTaGGAGACATTGTTAATCACCTACTGCATTATATTA +
Preference number: 4 (lower is better)
Translates to: HLKILFSHLLWC*ETLLITYCIIL
Trigger: TAATATAATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAGTATTTTGAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
3UTR CAA 72 bp TTTCTGCCTTGCCTTTGGATTTGGCTGAAAATTATATaGGAATCTTGTTATTCTGTTTCATTGCTCAATGAG +
Preference number: 4 (lower is better)
Translates to: FLPCLWIWLKII*ESCYSVSLLNE
Trigger: CTCATTGAGCAATGAAACAGAATAACAAGATTCCAATATAATTTTCAGCCAAATCCAAAGGCAAGGCAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CCA 90 bp TCGAGCAAAAGTGCAAGACAAGAAATGAGTACAGACAGTAAGATTCCATTTATATTCAGGTACTTGGGATaGAAAAATAGAACCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSKSARQEMSTDSKIPFIFRYLG*KNRTFC
Trigger: ACAAAAGGTTCTATTTTTCCATCCCAAGTACCTGAA...TATAAATGGAATCTTACTGTCTGTACTCATTTCTTGTCTTGCACTTTTGCTCGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS TCA 90 bp GGGCTCCCGGCCCCGGCCCGCGGAGCGCCGCGATCGGCTGGCAGATaGCGATTCGCCGAGCTCGCCGCCTGTCCTCCCGGAGGCGCTCGG +
Preference number: 5 (lower is better)
Translates to: GLPAPARGAPRSAGR*RFAELAACPPGGAR
Trigger: CCGAGCGCCTCCGGGAGGACAGGCGGCGAGCTCGGCGAATCGTCATCTGCCAGCCGATCGCGGCGCTCCGCGGGCCGGGGCCGGGAGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS CCA 90 bp GCGGTCGCCGGGCTCCGGAGCGTCCTCAGCGCTGCGGGGGTGCCGTaGGTGGCCTCCCTGCTTTCCTCCACCAGAATCCTGGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: AVAGLRSVLSAAGVP*VASLLSSTRILARP
Trigger: CGGCCGCGCCAGGATTCTGGTGGAGGAAAGCAGGGAGGCCACCCACGGCACCCCCGCAGCGCTGAGGACGCTCCGGAGCCCGGCGACCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS GCA 90 bp TCCGGAGCGTCCTCAGCGCTGCGGGGGTGCCGTGGGTGGCCTCCCTaGTTTCCTCCACCAGAATCCTGGCGCGGCCGGGCGCGTCTGCCG +
Preference number: 5 (lower is better)
Translates to: SGASSALRGCRGWPP*FPPPESWRGRARLP
Trigger: CGGCAGACGCGCCCGGCCGCGCCAGGATTCTGGTGGAGGAAAGCAGGGAGGCCACCCACGGCACCCCCGCAGCGCTGAGGACGCTCCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS CCA 90 bp CGGGGGTGCCGTGGGTGGCCTCCCTGCTTTCCTCCACCAGAATCCTaGCGCGGCCGGGCGCGTCTGCCGGGCACCAGAGCAGGCGCAGCA +
Preference number: 5 (lower is better)
Translates to: RGCRGWPPCFPPPES*RGRARLPGTRAGAA
Trigger: TGCTGCGCCTGCTCTGGTGCCCGGCAGACGCGCCCGGCCGCGCCAGGATTCTGGTGGAGGAAAGCAGGGAGGCCACCCACGGCACCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS GCA 90 bp CTCCCTGCTTTCCTCCACCAGAATCCTGGCGCGGCCGGGCGCGTCTaGCGGGCACCAGAGCAGGCGCAGCAGCAGCAGCAGCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LPAFLHQNPGAAGRV*RAPEQAQQQQQQQA
Trigger: AGCCTGCTGCTGCTGCTGCTGCTGCGCCTGCTCTGGTGCCCGGCAGACGCGCCCGGCCGCGCCAGGATTCTGGTGGAGGAAAGCAGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGGTATGCAGTCACACACCTCCTTTGGTGTTaGGAGACATTGTTAATCACC +
Preference number: 5 (lower is better)
Translates to: STATLVIIKPVDKRYAVTHLLWC*ETLLIT
Trigger: GGTGATTAACAATGTCTCCAAACACCAAAGGAGGTG...TGTGACTGCATACCGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp ATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGAAAGAGGTACCCGTGTaGGCCCTGAAGGAAAATGCT +
Preference number: 5 (lower is better)
Translates to: IFTQFHCNTCDHQAGGQAKEVPV*ALKENA
Trigger: AGCATTTTCCTTCAGGGCCAACACGGGTACCTCTTT...CGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp GCGCCTGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTTTACATACAGATTTCTaGGGAGTGTCACAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: APGLKGCSCLVPELRLSILHTDF*GVSQSD
Trigger: GTCTGACTGTGACACTCCCAAGAAATCTGTATGTAA...AATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCAGGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CAA 90 bp AGAGAAGGGCCAGAATCCATACAGCTTCACATTTTTACACAGTTCCACTGCAACGCATTTCTCCGTCAGTaGGAGCGACTTCTCATTCAG +
Preference number: 5 (lower is better)
Translates to: REGPESIQLHIFTQFHCNAFLRQ*ERLLIQ
Trigger: CTGAATGAGAAGTCGCTCCAACTGACGGAGAAATGC...GTTGCAGTGGAACTGTGTAAAAATGTGAAGCTGTATGGATTCTGGCCCTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CAGTTCCACAGAGAGACTTATTCAGAATTCCCCCATTTCCGACCACTGCACACTAATGACTTGCCATCATaGCAAAATGAGTGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: QFHRETYSEFPHFRPLHTNDLPS*QNEWGS
Trigger: GCTTCCCCACTCATTTTGCAATGATGGCAAGTCATT...AGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAATAAGTCTCTCTGTGGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS CCA 90 bp AAAGACTCAATGCCATATTGCAGATTTTTGCATTTCTCCGTCAGTTaGAGCGACTTCTCATTCAGATATGTGCTGTTAGTGGCGCGCGGT +
Preference number: 5 (lower is better)
Translates to: KDSMPYCRFLHFSVS*SDFSFRYVLLVARG
Trigger: ACCGCGCGCCACTAACAGCACATATCTGAATGAGAAGTCGCTCCAACTGACGGAGAAATGCAAAAATCTGCAATATGGCATTGAGTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CAA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAAAAAGAGGTACCCGTGTaGGCCCTGAAGGAAAATGCT +
Preference number: 5 (lower is better)
Translates to: IQISWECHSQTWLWRIYKKEVPV*ALKENA
Trigger: AGCATTTTCCTTCAGGGCCAACACGGGTACCTCTTT...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CAA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAACCTAAAGGGCTGCTCTaGTCTAGTACCAGAACTCAG +
Preference number: 5 (lower is better)
Translates to: IQISWECHSQTWLWRIYKPKGLL*SSTRTQ
Trigger: CTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGG...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CAA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCCTAAAGGGCTGCTCTaGTCTAGTACCAGAACTCAG +
Preference number: 5 (lower is better)
Translates to: NADYIQISWECHSQTWLWPKGLL*SSTRTQ
Trigger: CTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGG...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000440449.5
CDS-3UTR CAA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATCCATATTGCAGATTTTaGCATTTCTCCGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHPYCRF*HFSVSW
Trigger: CCAACTGACGGAGAAATGCAAAAATCTGCAATATGG...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CACATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAATGCATATTCTTCTGCTaGCCGTTTCCATGGACAACT +
Preference number: 5 (lower is better)
Translates to: HIFTQFHCNTCDHQAGGQCIFFC*PFPWTT
Trigger: AGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCA...TTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CACTGCACACTGATTATAAGGGTAGTCCACAAAAGGCTGGGACACTGGAAACATATGGGAAGGATATTATaGATAGAGACCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: HCTLIIRVVHKRLGHWKHMGRIL*IETCHR
Trigger: TCTGTGGCAGGTCTCTATCAATAATATCCTTCCCAT...ATGTTTCCAGTGTCCCAGCCTTTTGTGGACTACCCTTATAATCAGTGTGCAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS GCA 90 bp GGGTCACACCCTTTCGTTTTGTTAGAGAAAGACTCAATGCCATATTaGAGATTTTTGCATTTCTCCGTCAGTTGGAGCGACTTCTCATTC +
Preference number: 5 (lower is better)
Translates to: GSHPFVLLEKDSMPY*RFLHFSVSWSDFSF
Trigger: GAATGAGAAGTCGCTCCAACTGACGGAGAAATGCAAAAATCTGCAATATGGCATTGAGTCTTTCTCTAACAAAACGAAAGGGTGTGACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp AATGCTGATTACATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGTGCATATTCTTCTGCTaGCCGTTTCCATGGACAACT +
Preference number: 5 (lower is better)
Translates to: NADYIQISWECHSQTWLWCIFFC*PFPWTT
Trigger: AGTTGTCCATGGAAACGGCAAGCAGAAGAATATGCA...CCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTATGTAATCAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGCTTTAGACTCTTCGAGCGTGTAGTATACTTTGAAAGAGGTACCCGTGTTGGCCAGCAGGAAGCAAGTTaGGCTCTAAAATTTGCATAT +
Preference number: 5 (lower is better)
Translates to: CFRLFERVVYFERGTRVGQQEAS*ALKFAY
Trigger: ATATGCAAATTTTAGAGCCAAACTTGCTTCCTGCTG...GCCAACACGGGTACCTCTTTCAAAGTATACTACACGCTCGAAGAGTCTAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp ATTCAGAATTCCCCCATTTCCGACCACTGCACACTGATTATAAGGGTAGTCCACAGAAACAACAAAGTTTaGAACAGCATCACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: IQNSPISDHCTLIIRVVHRNNKV*NSITAG
Trigger: TCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCT...GTGGACTACCCTTATAATCAGTGTGCAGTGGTCGGAAATGGGGGAATTCTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTTCCTTTCATGTGAAGTaGGAGGATCTGGCTGTATTC +
Preference number: 5 (lower is better)
Translates to: LFSHLLWCLETLLITYCISFHVK*EDLAVF
Trigger: GAATACAGCCAGATCCTCCAACTTCACATGAAAGGA...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CAA 90 bp ATTTTTACACAGTTCCACTGCAACACTTGTGATCATCAAGCCGGTGGACAAGCGTGGTGTTTGGAGACATaGTTAATCACCTACTGCATT +
Preference number: 5 (lower is better)
Translates to: IFTQFHCNTCDHQAGGQAWCLET*LITYCI
Trigger: AATGCAGTAGGTGATTAACAATGTCTCCAAACACCA...CGCTTGTCCACCGGCTTGATGATCACAAGTGTTGCAGTGGAACTGTGTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTCACCTCCTTTGGTGTTaGGAGACATTGTTAATCACC +
Preference number: 5 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSHLLWC*ETLLIT
Trigger: GGTGATTAACAATGTCTCCAAACACCAAAGGAGGTG...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGTGGTCAAACCAAATTTaGGGGCTCATCTCAAAATAC +
Preference number: 5 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMWSNQI*GLISKY
Trigger: GTATTTTGAGATGAGCCCCAAAATTTGGTTTGACCA...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTATGAGTGGGGAAGCTTaGGTCAAACCAAATTTTGGG +
Preference number: 5 (lower is better)
Translates to: LFSHLLWCLETLLITYCIMSGEA*VKPNFG
Trigger: CCCAAAATTTGGTTTGACCAAAGCTTCCCCACTCAT...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CAA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTAATGACTTGCCATCATaGCAAAATGAGTGGGGAAGC +
Preference number: 5 (lower is better)
Translates to: LFSHLLWCLETLLITYCINDLPS*QNEWGS
Trigger: GCTTCCCCACTCATTTTGCAATGATGGCAAGTCATT...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CAA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTTTACATACAGATTTCTaGGGAGTGTCACAGTCAGAC +
Preference number: 5 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFLHTDF*GVSQSD
Trigger: GTCTGACTGTGACACTCCCAAGAAATCTGTATGTAA...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGGCCTAAAGGGCTGCTCTTGTCTAGTACCAGAACTCAGACTTTCCATTCTCAAGTACCCTTCTTGTATTaGACACGTAGCCTTGAATAT +
Preference number: 5 (lower is better)
Translates to: WPKGLLLSSTRTQTFHSQVPFLY*TRSLEY
Trigger: ATATTCAAGGCTACGTGTCAAATACAAGAAGGGTAC...TTGAGAATGGAAAGTCTGAGTTCTGGTACTAGACAAGAGCAGCCCTTTAGGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CATGTGAAGTTGGAGGATCTGGCTGTATTCTTTGGGCATCTGATGGAAACCATGTCACACCCTTTCGTTTaGTTAGAGAAAGACTCAATG +
Preference number: 5 (lower is better)
Translates to: HVKLEDLAVFFGHLMETMSHPFV*LEKDSM
Trigger: CATTGAGTCTTTCTCTAACAAAACGAAAGGGTGTGA...CATGGTTTCCATCAGATGCCCAAAGAATACAGCCAGATCCTCCAACTTCACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCGCATTTCTCCGTCAGTaGGAGCGACTTCTCATTCAG +
Preference number: 5 (lower is better)
Translates to: VILFHCSMRLNNKWKIESAFLRQ*ERLLIQ
Trigger: CTGAATGAGAAGTCGCTCCAACTGACGGAGAAATGC...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TTCTGTTTTGGAACAAAAGAACATTATTGGCACCTCACAGCAGGATATATGGAAAAAGAGGTACCCGTGTaGGCCCTGAAGGAAAATGCT +
Preference number: 5 (lower is better)
Translates to: FCFGTKEHYWHLTAGYMEKEVPV*ALKENA
Trigger: AGCATTTTCCTTCAGGGCCAACACGGGTACCTCTTT...TTCCATATATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTTCCAAAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTTGGTCAAACCAAATTTaGGGGCTCATCTCAAAATAC +
Preference number: 5 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFWSNQI*GLISKY
Trigger: GTATTTTGAGATGAGCCCCAAAATTTGGTTTGACCA...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp GAGAGCCCACGCAGTTACTGGGTTAGGACTTACATGAAGAAGGAAATATCCTTTCTCAGTACTCCTAGGTaGCTTTCCAAAATGATTCAA +
Preference number: 5 (lower is better)
Translates to: ESPRSYWVRTYMKKEISFLSTPR*LSKMIQ
Trigger: TTGAATCATTTTGGAAAGCAACCTAGGAGTACTGAG...AAAGGATATTTCCTTCTTCATGTAAGTCCTAACCCAGTAACTGCGTGGGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTAGAAACAACAAAGTTTaGAACAGCATCACAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSRNNKV*NSITAG
Trigger: TCCTGCTGTGATGCTGTTCAAAACTTTGTTGTTTCT...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CACAAGATTTGTTTTACTGCCAACATCTTTACTAACATCTCCTGTGGTTGGGGGGAAGGATTGAATGACTaGCCATCATTGCAAAATGAG +
Preference number: 5 (lower is better)
Translates to: HKICFTANIFTNISCGWGEGLND*PSLQNE
Trigger: CTCATTTTGCAATGATGGCAAGTCATTCAATCCTTC...CCCCCAACCACAGGAGATGTTAGTAAAGATGTTGGCAGTAAAACAAATCTTGTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTGCCTTGCCTTTGGATTaGGCTGAAAATTATATTGGA +
Preference number: 5 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSALPLD*AENYIG
Trigger: TCCAATATAATTTTCAGCCAAATCCAAAGGCAAGGC...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTATGAATATTTCTGCCTaGCCTTTGGATTTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: LFSHLLWCLETLLITYCIMNISA*PLDLAE
Trigger: TTCAGCCAAATCCAAAGGCAAGGCAGAAATATTCAT...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS GCA 90 bp TCTGAATACCCTTTCGTTTTGTTAGAGAAAGACTCAATGCCATATTaGAGATTTTTGCATTTCTCCGTCAGTTGGAGCGACTTCTCATTC +
Preference number: 5 (lower is better)
Translates to: SEYPFVLLEKDSMPY*RFLHFSVSWSDFSF
Trigger: GAATGAGAAGTCGCTCCAACTGACGGAGAAATGCAAAAATCTGCAATATGGCATTGAGTCTTTCTCTAACAAAACGAAAGGGTATTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAACAGCAGGAAGCAAGTTaGGCTCTAAAATTTGCATAT +
Preference number: 5 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKQQEAS*ALKFAY
Trigger: ATATGCAAATTTTAGAGCCAAACTTGCTTCCTGCTG...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS-3UTR CAA 90 bp AAGATACTTTGTTTAGGCGACTTCACATTTGCTAAATTGCAGTTTGAGGATTCCATGAGTGGGGAAGCTTaGGTCAAACCAAATTTTGGG +
Preference number: 5 (lower is better)
Translates to: KILCLGDFTFAKLQFEDSMSGEA*VKPNFG
Trigger: CCCAAAATTTGGTTTGACCAAAGCTTCCCCACTCAT...GGAATCCTCAAACTGCAATTTAGCAAATGTGAAGTCGCCTAAACAAAGTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp GAAGTCGGATTTATCTATTTCAGTTCCACAGAGAGACTTATTCAGAATTCCCCCAGAAAGAAATATTCTTaGAGTCCCTACCTCACACCA +
Preference number: 5 (lower is better)
Translates to: EVGFIYFSSTERLIQNSPRKKYS*SPYLTP
Trigger: TGGTGTGAGGTAGGGACTCAAAGAATATTTCTTTCT...GGGGGAATTCTGAATAAGTCTCTCTGTGGAACTGAAATAGATAAATCCGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS-3UTR CAA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAATGGGAAGGATATTATaGATAGAGACCTGCCACAGA +
Preference number: 5 (lower is better)
Translates to: YEISGCLFSQRFLANVNLMGRIL*IETCHR
Trigger: TCTGTGGCAGGTCTCTATCAATAATATCCTTCCCAT...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CTCTTTAGCCACCTCCTTTGGTGTTTGGAGACATTGTTAATCACCTACTGCATTTGTTATTCTGTTTCATaGCTCAATGAGGCTGAACAA +
Preference number: 5 (lower is better)
Translates to: LFSHLLWCLETLLITYCICYSVS*LNEAEQ
Trigger: TTGTTCAGCCTCATTGAGCAATGAAACAGAATAACA...AATGCAGTAGGTGATTAACAATGTCTCCAAACACCAAAGGAGGTGGCTAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGGGATATATGCCCTACCAGGAAGAAAATGTTAGGATTCAATGAGGCACTGTGTAAACACAGGTCTGATTaGCTGCTTAATTCTGTATTC +
Preference number: 5 (lower is better)
Translates to: WDICPTRKKMLGFNEALCKHRSD*LLNSVF
Trigger: GAATACAGAATTAAGCAGCAAATCAGACCTGTGTTT...ACACAGTGCCTCATTGAATCCTAACATTTTCTTCCTGGTAGGGCATATATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp ATACAGATTTCTTGGGAGTGTCACAGTCAGACTTGGTTGTGGCGAATCTACAAATATTTTTGGGTCATGTaGAAGAAGTACAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: IQISWECHSQTWLWRIYKYFWVM*KKYSSS
Trigger: TGAGGAACTGTACTTCTTCAACATGACCCAAAAATA...TTTGTAGATTCGCCACAACCAAGTCTGACTGTGACACTCCCAAGAAATCTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp CTTCTGAAGCCACATGTAAATAGGAAATCTTCAACACTCCTAGCAGCCTCAAGTCTTATACTTCCACACTaGAAGTTAATGACCTTACTC +
Preference number: 5 (lower is better)
Translates to: LLKPHVNRKSSTLLAASSLILPH*KLMTLL
Trigger: GAGTAAGGTCATTAACTTCAAGTGTGGAAGTATAAG...ACTTGAGGCTGCTAGGAGTGTTGAAGATTTCCTATTTACATGTGGCTTCAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGTCCTTTCATGTGAAGTaGGAGGATCTGGCTGTATTC +
Preference number: 5 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVSFHVK*EDLAVF
Trigger: GAATACAGCCAGATCCTCCAACTTCACATGAAAGGA...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TATGAAATCTCGGGGTGTCTGTTTAGCCAAAGATTTTTGGCTAACGTGAATCTAAACAAAAGAACATTATaGGCACCTCACAGCAGGATA +
Preference number: 5 (lower is better)
Translates to: YEISGCLFSQRFLANVNLNKRTL*APHSRI
Trigger: TATCCTGCTGTGAGGTGCCAATAATGTTCTTTTGTT...TAGATTCACGTTAGCCAAAAATCTTTGGCTAAACAGACACCCCGAGATTTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCATTTGTCATTGCCTTTaGTTCCAAGGGAAAAGCACC +
Preference number: 5 (lower is better)
Translates to: VILFHCSMRLNNKWKIESICHCL*FQGKST
Trigger: GGTGCTTTTCCCTTGGAACAAAAGGCAATGACAAAT...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp AAGAAAGCATGCTTTTATTATCGGTCTGGTGAAGGTGGAGATGGCTGGTATAAAAAAGCCATGATCTATTaGTCATTGCCTTTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: KKACFYYRSGEGGDGWYKKAMIY*SLPFVP
Trigger: TGGAACAAAAGGCAATGACAAATAGATCATGGCTTT...TTTATACCAGCCATCTCCACCTTCACCAGACCGATAATAAAAGCATGCTTTCTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp ATATTGGAATCTTGTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGCCATATTGCAGATTTTaGCATTTCTCCGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: ILESCYSVSLLNEAEQQVPYCRF*HFSVSW
Trigger: CCAACTGACGGAGAAATGCAAAAATCTGCAATATGG...CACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAACAAGATTCCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTTGGTGTTTGGAGACATaGTTAATCACCTACTGCATT +
Preference number: 5 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLWCLET*LITYCI
Trigger: AATGCAGTAGGTGATTAACAATGTCTCCAAACACCA...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTAGAAAGAAATATTCTTaGAGTCCCTACCTCACACCA +
Preference number: 5 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLRKKYS*SPYLTP
Trigger: TGGTGTGAGGTAGGGACTCAAAGAATATTTCTTTCT...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTAGACTCAATGCCATATaGCAGATTTTTGCATTTCTC +
Preference number: 5 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLRLNAI*QIFAFL
Trigger: GAGAAATGCAAAAATCTGCAATATGGCATTGAGTCT...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp TGCAGGGACCACAGAGTACTATGGACTATATACTTAAATGAATATTTCTGCCTTATTTCTGCCTTGCCTTaGGATTTGGCTGAAAATTAT +
Preference number: 5 (lower is better)
Translates to: CRDHRVLWTIYLNEYFCLISALP*DLAENY
Trigger: ATAATTTTCAGCCAAATCCAAAGGCAAGGCAGAAAT...AAGGCAGAAATATTCATTTAAGTATATAGTCCATAGTACTCTGTGGTCCCTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp GTTATTCTGTTTCATTGCTCAATGAGGCTGAACAACAAGTGGAAAATAGAATCCTATATGTCCAGTAAGTaGCTTCTAACTGCTGTATCA +
Preference number: 5 (lower is better)
Translates to: VILFHCSMRLNNKWKIESYMSSK*LLTAVS
Trigger: TGATACAGCAGTTAGAAGCAACTTACTGGACATATA...GGATTCTATTTTCCACTTGTTGTTCAGCCTCATTGAGCAATGAAACAGAATAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS-3UTR CAA 90 bp GGTATCACTATGCTGTTTGATCTCACACCATTTGGAATATTTCTGAAATCCATAGAATACCCTTTCGTTTaGTTAGAGAAAGACTCAATG +
Preference number: 5 (lower is better)
Translates to: GITMLFDLTPFGIFLKSIEYPFV*LEKDSM
Trigger: CATTGAGTCTTTCTCTAACAAAACGAAAGGGTATTC...TATGGATTTCAGAAATATTCCAAATGGTGTGAGATCAAACAGCATAGTGATACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS GCA 72 bp CGCATCCTGAGCCACAGGCGCCGCCGCCACCGCTGCTaGCGGGGCGAAGCACAGCCCGGGCGGCCCCGACTC +
Preference number: 6 (lower is better)
Translates to: RILSHRRRRHRC*RGEAQPGRPRL
Trigger: GAGTCGGGGCCGCCCGGGCTGTGCTTCGCCCCGGCAGCAGCGGTGGCGGCGGCGCCTGTGGCTCAGGATGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS TCA 72 bp GCCCCGGCCCGCGGAGCGCCGCGATCGGCTGGCAGATaGCGATTCGCCGAGCTCGCCGCCTGTCCTCCCGGA +
Preference number: 6 (lower is better)
Translates to: APARGAPRSAGR*RFAELAACPPG
Trigger: TCCGGGAGGACAGGCGGCGAGCTCGGCGAATCGTCATCTGCCAGCCGATCGCGGCGCTCCGCGGGCCGGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377602.5
CDS GCA 72 bp TCCTCAGCGCTGCGGGGGTGCCGTGGGTGGCCTCCCTaGTTTCCTCCACCAGAATCCTGGCGCGGCCGGGCG +
Preference number: 6 (lower is better)
Translates to: SSALRGCRGWPP*FPPPESWRGRA
Trigger: CGCCCGGCCGCGCCAGGATTCTGGTGGAGGAAAGCAGGGAGGCCACCCACGGCACCCCCGCAGCGCTGAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS CAA 90 bp GAAAGACTCAATGCCATATTGCAGATTTTTGCATTTCTCCGTCAGTaGGAGCGACTTCTCATTCAGATATGTGCTGTTAGTGGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: ERLNAILQIFAFLRQ*ERLLIQICAVSGAR
Trigger: CCGCGCGCCACTAACAGCACATATCTGAATGAGAAGTCGCTCCAACTGACGGAGAAATGCAAAAATCTGCAATATGGCATTGAGTCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS TCA 72 bp GGTAGTCGTTCTCTGAATACCTTAGCGTTTGTTCCGTaGTGCAGCACTTCTTTCAGTCAAGGATGTAGGCCA +
Preference number: 6 (lower is better)
Translates to: GSRSLNTLAFVP*CSTSFSQGCRP
Trigger: TGGCCTACATCCTTGACTGAAAGAAGTGCTGCATCACGGAACAAACGCTAAGGTATTCAGAGAACGACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648997.1
CDS CAA 90 bp CCTTTCGTTTTGTTAGAGAAAGACTCAATGCCATATTGCAGATTTTaGCATTTCTCCGTCAGTTGGAGCGACTTCTCATTCAGATATGTG +
Preference number: 6 (lower is better)
Translates to: PFVLLEKDSMPYCRF*HFSVSWSDFSFRYV
Trigger: CACATATCTGAATGAGAAGTCGCTCCAACTGACGGAGAAATGCAAAAATCTGCAATATGGCATTGAGTCTTTCTCTAACAAAACGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1
CDS CAA 72 bp TTGTTAGAGAAAGACTCAATGCCATATTGCAGATTTTaGCATTTCTCCGTCAGTTGGAGCGACTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: LLEKDSMPYCRF*HFSVSWSDFSF
Trigger: GAATGAGAAGTCGCTCCAACTGACGGAGAAATGCAAAAATCTGCAATATGGCATTGAGTCTTTCTCTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377602.5
ENST00000648997.1