RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST8SIA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000177511

Ensembl transcript IDs: ENST00000324000.4, ENST00000586360.1, ENST00000590600.1

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTAGCAGTGCTGGCTTCTCTTGGGTCTCTGTGGCCCTCACATTCTaGCAGCTTGTTTCCAAGGGCAGGCGAGGCTGCCTGTCACAAGGG +
Preference number: 1 (lower is better)
Translates to: SSSAGFSWVSVALTF*QLVSKGRRGCLSQG
Trigger: CCCTTGTGACAGGCAGCCTCGCCTGCCCTTGGAAACAAGCTGCCAGAATGTGAGGGCCACAGAGACCCAAGAGAAGCCAGCACTGCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TTAATTGGGCCACAGAGTCCAGACAGGTCAATCAGCTGGCCAAGGTaGCCTCAATCCCCAGCACCCAGAGTGCTCTATCTGGGCTGCCAG +
Preference number: 1 (lower is better)
Translates to: LIGPQSPDRSISWPR*PQSPAPRVLYLGCQ
Trigger: CTGGCAGCCCAGATAGAGCACTCTGGGTGCTGGGGATTGAGGGCACCTTGGCCAGCTGATTGACCTGTCTGGACTCTGTGGCCCAATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp TGGCCTCGATTAATTGGGCCACAGAGTCCAGACAGGTCAATCAGCTaGCCAAGGTGCCCTCAATCCCCAGCACCCAGAGTGCTCTATCTG +
Preference number: 1 (lower is better)
Translates to: WPRLIGPQSPDRSIS*PRCPQSPAPRVLYL
Trigger: CAGATAGAGCACTCTGGGTGCTGGGGATTGAGGGCACCTTGGCCAGCTGATTGACCTGTCTGGACTCTGTGGCCCAATTAATCGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp GCACACAATGATACGGAAAACGATCGCACCTCAGCACTAGTCACCTaGGCACCTGGCCTGGCCAAGATCCTCCTCCACTTTAACCCAGCT +
Preference number: 1 (lower is better)
Translates to: AHNDTENDRTSALVT*APGLAKILLHFNPA
Trigger: AGCTGGGTTAAAGTGGAGGAGGATCTTGGCCAGGCCAGGTGCCCAGGTGACTAGTGCTGAGGTGCGATCGTTTTCCGTATCATTGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp GTTTCCAAGGGCAGGCGAGGCTGCCTGTCACAAGGGAGGTCAGTCTaGTTTGTTAAGGCCCTCGGCTTCTTCCAAAGAGCAAGAGAACTT +
Preference number: 1 (lower is better)
Translates to: VSKGRRGCLSQGRSV*FVKALGFFQRAREL
Trigger: AAGTTCTCTTGCTCTTTGGAAGAAGCCGAGGGCCTTAACAAATCAGACTGACCTCCCTTGTGACAGGCAGCCTCGCCTGCCCTTGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp CCTCAGTGCCTTTCCAGATATGTAGAGCCAAGTGAGCTTACTGGGTaGCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGT +
Preference number: 1 (lower is better)
Translates to: PQCLSRYVEPSELTG*LVLPLLLCRHCFVG
Trigger: ACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGTAAGCTCACTTGGCTCTACATATCTGGAAAGGCACTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp TCAACTCCAGTTGAGTGCAACTTAAACTCTCAGCGTGATGTTTACTaGGTGTCCCCTGGTGGGGTAGAGACCTTGGAACCTCAGTGCCTT +
Preference number: 1 (lower is better)
Translates to: STPVECNLNSQRDVY*VSPGGVETLEPQCL
Trigger: AAGGCACTGAGGTTCCAAGGTCTCTACCCCACCAGGGGACACCCAGTAAACATCACGCTGAGAGTTTAAGTTGCACTCAACTGGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp ACTCAGTTGGAAGTACACTCACAACTAGTGGTGAGAAAGGACAGTTaGTCTATTGCTCAATGCCAGGGGACTGCAGGGGCCAAATGTGTA +
Preference number: 1 (lower is better)
Translates to: TQLEVHSQLVVRKDS*SIAQCQGTAGAKCV
Trigger: TACACATTTGGCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACCACTAGTTGTGAGTGTACTTCCAACTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp AACGTTCTCCCATTCCTTGGCTTCCCCACCAAATTAGGTTTCTCTTaGCACTCACATTCACGGATAAGTAGTGGCTCGGGCATAAGGAAG +
Preference number: 1 (lower is better)
Translates to: NVLPFLGFPTKLGFS*HSHSRISSGSGIRK
Trigger: CTTCCTTATGCCCGAGCCACTACTTATCCGTGAATGTGAGTGCCAAGAGAAACCTAATTTGGTGGGGAAGCCAAGGAATGGGAGAACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp GAAGAGTTGCTTATTTCATACAGCTGTGTTTGCTGGGAGATCAGCTaGATAATCCGGGTCCTAACCCCAGAACCCCAGGGTAACCTTAAA +
Preference number: 1 (lower is better)
Translates to: EELLISYSCVCWEIS*IIRVLTPEPQGNLK
Trigger: TTTAAGGTTACCCTGGGGTTCTGGGGTTAGGACCCGGATTATGCAGCTGATCTCCCAGCAAACACAGCTGTATGAAATAAGCAACTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp GGAAGTACACTCACAACTAGTGGTGAGAAAGGACAGTTGCTCTATTaGTCAATGCCAGGGGACTGCAGGGGCCAAATGTGTATTAGTAGA +
Preference number: 1 (lower is better)
Translates to: GSTLTTSGEKGQLLY*SMPGDCRGQMCISR
Trigger: TCTACTAATACACATTTGGCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACCACTAGTTGTGAGTGTACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp CTATATTCTGAGAGAACACCCAGCCTAGTGCATGGGTTGGGATTATaGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCC +
Preference number: 1 (lower is better)
Translates to: LYSERTPSLVHGLGL*ETLNLGWNGLTDVA
Trigger: GGCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGTGTTCTCTCAGAATATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp CGCAATGCTATCCACAACATAGGCTTTCTTTGTGATCATGAAAGATaGACTGCCTTATATCCCACTCACCACAGAGGGACCATCTTGCTG +
Preference number: 1 (lower is better)
Translates to: RNAIHNIGFLCDHER*TALYPTHHRGTILL
Trigger: CAGCAAGATGGTCCCTCTGTGGTGAGTGGGATATAAGGCAGTGCATCTTTCATGATCACAAAGAAAGCCTATGTTGTGGATAGCATTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp GGGAATATCCAGTGCTACAATGTTCTCAAAGAGAGCAAATGGTTCTaGATTGGTGGTGGTGCACACAATGATACGGAAAACGATCGCACC +
Preference number: 1 (lower is better)
Translates to: GNIQCYNVLKESKWF*IGGGAHNDTENDRT
Trigger: GGTGCGATCGTTTTCCGTATCATTGTGTGCACCACCACCAATCCAGAACCATTTGCTCTCTTTGAGAACATTGTAGCACTGGATATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp TGGCACATTATCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTaGTCACCCTTGTTATACTGGGTTAGTCTTAGAACTGGAGCCTCC +
Preference number: 1 (lower is better)
Translates to: WHIIQQRWYKATSNN*SPLLYWVSLRTGAS
Trigger: GGAGGCTCCAGTTCTAAGACTAACCCAGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGATAATGTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp AGAAAAGCCACAGTTGGTAATCTCCCAAGATACTGGGGAGTCTGTTaGGAGGTTCCTAAGAGTCACGTGGAATATTTGAACACCTTGGGA +
Preference number: 1 (lower is better)
Translates to: RKATVGNLPRYWGVC*EVPKSHVEYLNTLG
Trigger: TCCCAAGGTGTTCAAATATTCCACGTGACTCTTAGGAACCTCTCAACAGACTCCCCAGTATCTTGGGAGATTACCAACTGTGGCTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTTGAGTaGAACTTAAACTCTCAGCGTGATGTTTACTGGGTGTCCCCTGGT +
Preference number: 1 (lower is better)
Translates to: FTVGNFSKGKSTPVE*NLNSQRDVYWVSPG
Trigger: ACCAGGGGACACCCAGTAAACATCACGCTGAGAGTTTAAGTTGCACTCAACTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TCATGGTCCAGCCTTACATCACATGACACCTTATCCTACAAAGTTTaGCCAGTCAGCAATGAAGTTGCCCAGAGATATTCCTACCAAGTG +
Preference number: 1 (lower is better)
Translates to: SWSSLTSHDTLSYKV*PVSNEVAQRYSYQV
Trigger: CACTTGGTAGGAATATCTCTGGGCAACTTCATTGCTGACTGGGCAAACTTTGTAGGATAAGGTGTCATGTGATGTAAGGCTGGACCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp AGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTaGAATGGCCTTACAGATGTGGCCACAGTGCTATTATTTGCCATA +
Preference number: 1 (lower is better)
Translates to: SLVHGLGLWETLNLG*NGLTDVATVLLFAI
Trigger: TATGGCAAATAATAGCACTGTGGCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp TGCACAGCTATAGAAAGAAGTCTGGCCAAAGCTTCATTAGGACGGTaGCACATTATCCAACAGAGGTGGTACAAGGCCACAAGTAATAAC +
Preference number: 1 (lower is better)
Translates to: CTAIERSLAKASLGR*HIIQQRWYKATSNN
Trigger: GTTATTACTTGTGGCCTTGTACCACCTCTGTTGGATAATGTGCCACCGTCCTAATGAAGCTTTGGCCAGACTTCTTTCTATAGCTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp GATTTGTTAAGGCCCTCGGCTTCTTCCAAAGAGCAAGAGAACTTCTaGCAGAGTTGGGAAAGAGGGAAGTTTTCAATACCAGTATCTCAG +
Preference number: 1 (lower is better)
Translates to: DLLRPSASSKEQENF*QSWERGKFSIPVSQ
Trigger: CTGAGATACTGGTATTGAAAACTTCCCTCTTTCCCAACTCTGTCAGAAGTTCTCTTGCTCTTTGGAAGAAGCCGAGGGCCTTAACAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TTTAGGCTGGAATGGCCTTACAGATGTGGCCACAGTGCTATTATTTaGCATAACAATGCCTACATCAAGAGACGCAATGCTATCCACAAC +
Preference number: 1 (lower is better)
Translates to: FRLEWPYRCGHSAII*HNNAYIKRRNAIHN
Trigger: GTTGTGGATAGCATTGCGTCTCTTGATGTAGGCATTGTTATGGCAAATAATAGCACTGTGGCCACATCTGTAAGGCCATTCCAGCCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TCCTATTTGGTACTCACTGACTTAAAAATTGTTCAGGCAGTGCTATaGTGGAGCTGGCTCATGCTGTATTGGAGCCAACTTATACTGGCT +
Preference number: 1 (lower is better)
Translates to: SYLVLTDLKIVQAVL*WSWLMLYWSQLILA
Trigger: AGCCAGTATAAGTTGGCTCCAATACAGCATGAGCCAGCTCCAGCATAGCACTGCCTGAACAATTTTTAAGTCAGTGAGTACCAAATAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp GACATCAAGGTCACAGACAGATGGCACAGTAGTCATAGTCAGCACTaGCAGGCACACAACACTACTAAACATACAGCACTTTTACAATAT +
Preference number: 1 (lower is better)
Translates to: DIKVTDRWHSSHSQH*QAHNTTKHTALLQY
Trigger: ATATTGTAAAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTACTGTGCCATCTGTCTGTGACCTTGATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp AGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATaGCCTTACAGATGTGGCCACAGTGCTATTATTTGCCATAACAAT +
Preference number: 1 (lower is better)
Translates to: SAWVGIMGDTKFRLE*PYRCGHSAIICHNN
Trigger: ATTGTTATGGCAAATAATAGCACTGTGGCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp CAATTAATTGTCAATGTCCATCTAACTAATGGAAGCAGCACAGTGTaGTGTAGCAGAATCAGTGGTTGGGAGACCCAGACTCTAATTCCA +
Preference number: 1 (lower is better)
Translates to: QLIVNVHLTNGSSTV*CSRISGWETQTLIP
Trigger: TGGAATTAGAGTCTGGGTCTCCCAACCACTGATTCTGCTACACCACACTGTGCTGCTTCCATTAGTTAGATGGACATTGACAATTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp ACAGAGATTTTGCATGGTCAGCTAGAAGCTGCTATTCTTCAAAAGTaGAGGGTGATCTATTGGGATCATCTCCAGGAAGTCCTCCTTATA +
Preference number: 1 (lower is better)
Translates to: TEILHGQLEAAILQK*RVIYWDHLQEVLLI
Trigger: TATAAGGAGGACTTCCTGGAGATGATCCCAATAGATCACCCTTCACTTTTGAAGAATAGCAGCTTCTAGCTGACCATGCAAAATCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp ACACAAGGCAATGAGGCAGGCACATTCACACTTAACAAGTACATTTaGGGAGCTGTCGAAGCAAATGGTTGCATTTTCTTCACAAACTAC +
Preference number: 1 (lower is better)
Translates to: TQGNEAGTFTLNKYI*GAVEANGCIFFTNY
Trigger: GTAGTTTGTGAAGAAAATGCAACCATTTGCTTCGACAGCTCCTCAAATGTACTTGTTAAGTGTGAATGTGCCTGCCTCATTGCCTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp ACTAGAGGAGGAATCATAATTTCTCCACTAATTGACAGTGTCATCTaGGGCAAATCACCTAGCCTCCCTGTTTCTCCATTTTCTCATTTG +
Preference number: 1 (lower is better)
Translates to: TRGGIIISPLIDSVI*GKSPSLPVSPFSHL
Trigger: CAAATGAGAAAATGGAGAAACAGGGAGGCTAGGTGATTTGCCCCAGATGACACTGTCAATTAGTGGAGAAATTATGATTCCTCCTCTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp TTTGCCCAGTCAGCAATGAAGTTGCCCAGAGATATTCCTACCAAGTaGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACT +
Preference number: 1 (lower is better)
Translates to: FAQSAMKLPRDIPTK*YFFTVGNFSKGKST
Trigger: AGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGGTAGGAATATCTCTGGGCAACTTCATTGCTGACTGGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TGTAGTTGTATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTaGTACAATGTTCTCAAAGAGAGCAAATGGTTCTGGATTGGTGGT +
Preference number: 1 (lower is better)
Translates to: CSCIDLTSVERGNIQ*YNVLKESKWFWIGG
Trigger: ACCACCAATCCAGAACCATTTGCTCTCTTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTATACAACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp AAAATTGTTCAGGCAGTGCTATGCTGGAGCTGGCTCATGCTGTATTaGAGCCAACTTATACTGGCTCTTGAAAACATATTGTTGTGTTTT +
Preference number: 1 (lower is better)
Translates to: KIVQAVLCWSWLMLY*SQLILALENILLCF
Trigger: AAAACACAACAATATGTTTTCAAGAGCCAGTATAAGTTGGCTCCAATACAGCATGAGCCAGCTCCAGCATAGCACTGCCTGAACAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp CTCCATTTTCTCATTTGTAAAGTCAAGAATCAAGACTGGCGAAGCTaGAGGCCTCTTCATTTCCAGTGTCCTAGCATTCTACAATATTGT +
Preference number: 1 (lower is better)
Translates to: LHFLICKVKNQDWRS*RPLHFQCPSILQYC
Trigger: ACAATATTGTAGAATGCTAGGACACTGGAAATGAAGAGGCCTTCAGCTTCGCCAGTCTTGATTCTTGACTTTACAAATGAGAAAATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp TGTGCTTTTCTGCACAGTATGGGTTCAGATCTGGATCTTGAAATATaGCTAAAGAGCACTTCTAACATGGGGTACAGTTATTCTCCATAT +
Preference number: 1 (lower is better)
Translates to: CAFLHSMGSDLDLEI*LKSTSNMGYSYSPY
Trigger: ATATGGAGAATAACTGTACCCCATGTTAGAAGTGCTCTTTAGCCATATTTCAAGATCCAGATCTGAACCCATACTGTGCAGAAAAGCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp TTGCAATTTGCAAACAAAGCTTGTTCTGTGGATTACCAGATTACCTaGTTTCTAAACACTCAGTTGGAAGTACACTCACAACTAGTGGTG +
Preference number: 1 (lower is better)
Translates to: LQFANKACSVDYQIT*FLNTQLEVHSQLVV
Trigger: CACCACTAGTTGTGAGTGTACTTCCAACTGAGTGTTTAGAAATCAGGTAATCTGGTAATCCACAGAACAAGCTTTGTTTGCAAATTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp CTCCCTCTTCTTTTTGCAAGTACTTCAATGACTTTATTCCACTTATaGAGGTTGACCAAACCTCTTTCCCATTGTCTGCCAATTTTTCTT +
Preference number: 1 (lower is better)
Translates to: LPLLFASTSMTLFHL*RLTKPLSHCLPIFL
Trigger: AAGAAAAATTGGCAGACAATGGGAAAGAGGTTTGGTCAACCTGCATAAGTGGAATAAAGTCATTGAAGTACTTGCAAAAAGAAGAGGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 90 bp AAAAGGAATCACAAGGGAGTCCATCGTGATTTGCCTATTTTGTCATaGAGCATCAAAGTTACCCAGAACCTTAAACACATCAAGTACAAA +
Preference number: 1 (lower is better)
Translates to: KRNHKGVHRDLPILS*SIKVTQNLKHIKYK
Trigger: TTTGTACTTGATGTGTTTAAGGTTCTGGGTAACTTTGATGCTTCATGACAAAATAGGCAAATCACGATGGACTCCCTTGTGATTCCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 90 bp TGGTTGCATTTTCTTCACAAACTACAGTCACAATATACACGCAATTaGCTCTGTCCTTGTTCACCAAGAAAGCAGAAGATATTTACAAGT +
Preference number: 1 (lower is better)
Translates to: WLHFLHKLQSQYTRN*LCPCSPRKQKIFTS
Trigger: ACTTGTAAATATCTTCTGCTTTCTTGGTGAACAAGGACAGAGGCAATTGCGTGTATATTGTGACTGTAGTTTGTGAAGAAAATGCAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 90 bp TACTTTGTTCAAAATGGTATATATGACTCCGGATGTATATATTACTaGTTTCCAAATGGTGGTCACACGAATCACCTGGGAATCTTTGTA +
Preference number: 1 (lower is better)
Translates to: YFVQNGIYDSGCIYY*FPNGGHTNHLGIFV
Trigger: TACAAAGATTCCCAGGTGATTCGTGTGACCACCATTTGGAAACCAGTAATATATACATCCGGAGTCATATATACCATTTTGAACAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp GTGCTGGCTTCTCTTGGGTCTCTGTGGCCCTCACATTCTGGCAGCTaGTTTCCAAGGGCAGGCGAGGCTGCCTGTCACAAGGGAGGTCAG +
Preference number: 2 (lower is better)
Translates to: VLASLGSLWPSHSGS*FPRAGEAACHKGGQ
Trigger: CTGACCTCCCTTGTGACAGGCAGCCTCGCCTGCCCTTGGAAACAAGCTGCCAGAATGTGAGGGCCACAGAGACCCAAGAGAAGCCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGCTGGGTGTCCCCTGGTaGGGTAGAGACCTTGGAACC +
Preference number: 2 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQLGVPW*GRDLGT
Trigger: GGTTCCAAGGTCTCTACCCCACCAGGGGACACCCAG...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCGTGGCCTCGATTAATTaGGCCACAGAGTCCAGACAG +
Preference number: 2 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTVASIN*ATESRQ
Trigger: CTGTCTGGACTCTGTGGCCCAATTAATCGAGGCCAC...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp TTGGTGACCGGATCTCAGCCTGTTACTCAACTCCTCCCAGGGCTCTaGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: LVTGSQPVTQLLPGL*AVSALVLFCTVWVQ
Trigger: CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGGGAGGAGTTGAGTAACAGGCTGAGATCCGGTCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCCCTGGGCACCTGGCCTaGCCAAGATCCTCCTCCACT +
Preference number: 2 (lower is better)
Translates to: GHIGIKTPESESGPSNIGPGHLA*PRSSST
Trigger: AGTGGAGGAGGATCTTGGCCAGGCCAGGTGCCCAGG...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCCAGCAAAACAGGTCCTaGCCCAGTTGGCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: GHIGIKTPESESGPSNIGQQNRS*PSWPEA
Trigger: GGCCTCTGGCCAACTGGGGCAGGACCTGTTTTGCTG...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCAGTCACCTGGGCACCTaGCCTGGCCAAGATCCTCCT +
Preference number: 2 (lower is better)
Translates to: GHIGIKTPESESGPSNIGSHLGT*PGQDPP
Trigger: AGGAGGATCTTGGCCAGGCCAGGTGCCCAGGTGACT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAAAGGTCCTGCCCCAGTTaGCCAGAGGCCTCTGATTAT +
Preference number: 2 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLERSCPS*PEASDY
Trigger: ATAATCAGAGGCCTCTGGCCAACTGGGGCAGGACCT...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp CACTCAGTTGGAAGTACACTCACAACTAGTGGTGAGAAAGGACAGTaGCTCTATTGCTCAATGCCAGGGGACTGCAGGGGCCAAATGTGT +
Preference number: 2 (lower is better)
Translates to: HSVGSTLTTSGEKGQ*LYCSMPGDCRGQMC
Trigger: ACACATTTGGCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACCACTAGTTGTGAGTGTACTTCCAACTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCTTCAAAAGTGAAGGGTaGTCTATTGGGATCATCTCC +
Preference number: 2 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTFKSEG*SIGIIS
Trigger: GGAGATGATCCCAATAGATCACCCTTCACTTTTGAA...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCTGGAAATGCTTCCCTTaGTGGAGGGGACATTTAAAA +
Preference number: 2 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTWKCFP*WRGHLK
Trigger: TTTTAAATGTCCCCTCCACCAAGGGAAGCATTTCCA...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGGGATGGGAATGATTTaGTTTCTACTCATATGGCTG +
Preference number: 2 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQGMGMI*FLLIWL
Trigger: CAGCCATATGAGTAGAAATCAAATCATTCCCATCCC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGTCACGTGGAATATTTaGACACCTTGGGATCCAATA +
Preference number: 2 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQVTWNI*TPWDPI
Trigger: TATTGGATCCCAAGGTGTTCAAATATTCCACGTGAC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCACGGTGGTGGGGGATaGGAAAGTCCTCCCACTCTA +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAHGGGG*ESPPTL
Trigger: TAGAGTGGGAGGACTTTCCCATCCCCCACCACCGTG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCTGCAGAGGGAAGGAGTaGGATGGTGATAGAGATGGA +
Preference number: 2 (lower is better)
Translates to: GHIGIKTPESESGPSNIGCRGKE*DGDRDG
Trigger: TCCATCTCTATCACCATCTCACTCCTTCCCTCTGCA...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCAAGGGAGTCCATCGTaGTTTGCCTATTTTGTCATG +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVQGSPS*FAYFVM
Trigger: CATGACAAAATAGGCAAATCACGATGGACTCCCTTG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGATGGTGGTGCACACAATaGTACGGAAAACGATCGCAC +
Preference number: 2 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRWWCTQ*YGKRSH
Trigger: GTGCGATCGTTTTCCGTATCATTGTGTGCACCACCA...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTCCAATGGTCCTGAGCTaGTTACTGCCCAGTTCACTG +
Preference number: 2 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFPMVLS*LLPSSL
Trigger: CAGTGAACTGGGCAGTAATCAGCTCAGGACCATTGG...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGAACAGAGATTTTGCATaGTCAGCTAGAAGCTGCTAT +
Preference number: 2 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQNRDFA*SARSCY
Trigger: ATAGCAGCTTCTAGCTGACCATGCAAAATCTCTGTT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCGGATGTATATATTACTaGTTTCCAAATGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTGCIYY*FPNGGH
Trigger: GTGACCACCATTTGGAAACCAGTAATATATACATCC...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTGGCCAGACGTTGGGCTaGATTGGAAGAACAAAGTGC +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAGQTLG*IGRTKC
Trigger: GCACTTTGTTCTTCCAATTCAGCCCAACGTCTGGCC...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGCAAATTGAATCTGAATaGATCACTTCAGTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQQIESE*ITSVPC
Trigger: ACAGGGAACTGAAGTGATTCATTCAGATTCAATTTG...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCATCAAGAGACGCAATaGTATCCACAACATAGGCTT +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVHQETQ*YPQHRL
Trigger: AAGCCTATGTTGTGGATAGCATTGCGTCTCTTGATG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGTTGGATTCCAACTCTTaGCACTGCACAATGGCTTTT +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVLDSNS*HCTMAF
Trigger: AAAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAA...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp TCATTGCCTCTATATTCTGAGAGAACACCCAGCCTAGTGCATGGGTaGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACA +
Preference number: 2 (lower is better)
Translates to: SLPLYSERTPSLVHG*GLWETLNLGWNGLT
Trigger: TGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGTGTTCTCTCAGAATATAGAGGCAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp ATATCCAGTGCTACAATGTTCTCAAAGAGAGCAAATGGTTCTGGATaGGTGGTGGTGCACACAATGATACGGAAAACGATCGCACCTCAG +
Preference number: 2 (lower is better)
Translates to: ISSATMFSKRANGSG*VVVHTMIRKTIAPQ
Trigger: CTGAGGTGCGATCGTTTTCCGTATCATTGTGTGCACCACCACCAATCCAGAACCATTTGCTCTCTTTGAGAACATTGTAGCACTGGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTAAGAGCCAATGGTCCTaGGCTGATTACTGCCCAGTT +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTKSQWS*ADYCPV
Trigger: AACTGGGCAGTAATCAGCTCAGGACCATTGGCTCTT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTTGTGGGAGGAATTCTTaGCACCACCATTTAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCACGRNS*HHHLAL
Trigger: CAGGGCTAAATGGTGGTGTCAAGAATTCCTCCCACA...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTGTCCCTGCTTCCTTTaGTCTCAGGTCAATACCGCT +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTCPCFL*SQVNTA
Trigger: AGCGGTATTGACCTGAGATCAAAGGAAGCAGGGACA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAAAAGAGCCAGAGGGTaGAGGCATACTTGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAKRARG*RHTCAQ
Trigger: CTGAGCACAAGTATGCCTTCACCCTCTGGCTCTTTT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGGAGTCCATCGTGATTTaGCTATTTTGTCATGAAGCA +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVESIVI*LFCHEA
Trigger: TGCTTCATGACAAAATAGGCAAATCACGATGGACTC...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCACAGAGGGACCATCTTaGTGTAGAATGACTGAATGG +
Preference number: 2 (lower is better)
Translates to: GHIGIKTPESESGPSNIGTEGPS*CRMTEW
Trigger: CCATTCAGTCATTCTACAGCAAGATGGTCCCTCTGT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGCTTAAGCTGATTCATTaGCTCTATATTCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQLKLIH*LYILRE
Trigger: TTCTCTCAGAATATAGAGGCAATGAATCAGCTTAAG...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGTCCAACTCTTGCCACTaGACAATGGCTTTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVSNSCH*TMAFSF
Trigger: AAAAGAAAAAGCCATTGTGCAGTGGCAAGAGTTGGA...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCACAAGCCTGGGAGCTaGAGGAGAGCCAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCHKPGS*RRASCL
Trigger: AAGGCAGCTGGCTCTCCTGCAGCTCCCAGGCTTGTG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGACACTAAATTTAGGCTaGAATGGCCTTACAGATGTG +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVTLNLG*NGLTDV
Trigger: CACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGT...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTGAGAGCAAATGGTTCTaGATTGGTGGTGGTGCACAC +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAESKWF*IGGGAH
Trigger: GTGTGCACCACCACCAATCCAGAACCATTTGCTCTC...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCTGGTTTCCAAATGGTaGTCACACGAATCACCTGGG +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCALVSKW*SHESPG
Trigger: CCCAGGTGATTCGTGTGACCACCATTTGGAAACCAG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp CACATGACACCTTATCCTACAAAGTTTGCCCAGTCAGCAATGAAGTaGCCCAGAGATATTCCTACCAAGTGGTATTTCTTCACCGTTGGA +
Preference number: 2 (lower is better)
Translates to: HMTPYPTKFAQSAMK*PRDIPTKWYFFTVG
Trigger: TCCAACGGTGAAGAAATACCACTTGGTAGGAATATCTCTGGGCAACTTCATTGCTGACTGGGCAAACTTTGTAGGATAAGGTGTCATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGCATCTTGCTGTAGAATaGCTGAATGGACTGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQHLAVE*LNGLVR
Trigger: CCTCACCAGTCCATTCAGTCATTCTACAGCAAGATG...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTCCCAGGGTCTTAAGCTaGTTCATTGCCTCTATATTC +
Preference number: 2 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFPRVLS*FIASIF
Trigger: GAATATAGAGGCAATGAATCAGCTTAAGACCCTGGG...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTATATGTAGAGCCAAGTaGGCTTACTGGGTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAICRAK*AYWVPC
Trigger: ACAAGGCACCCAGTAAGCTCACTTGGCTCTACATAT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCAGCATAGTCCCAAATaGAACATTCCCTTTATCAAT +
Preference number: 2 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVQHSPK*NIPFIN
Trigger: ATTGATAAAGGGAATGTTGCATTTGGGACTATGCTG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTTGGACTGGTGAGGACTaGATCAGAGGCATTTCTTTA +
Preference number: 2 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFWTGED*IRGISL
Trigger: TAAAGAAATGCCTCTGATGCAGTCCTCACCAGTCCA...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAGTCATAGTCAGCACTaGCAGGCACACAACACTACT +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCASHSQH*QAHNTT
Trigger: AGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAACCCAGCCTAGTGCATaGGTTGGGATTATGGGAGAC +
Preference number: 2 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKTQPSA*VGIMGD
Trigger: GTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTATTGACAGTGTCATCTaGGGCAAATCACCTAGCCTC +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTIDSVI*GKSPSL
Trigger: GAGGCTAGGTGATTTGCCCCAGATGACACTGTCAAT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACACAGTGCTATTATTTaGCATAACAATGCCTACATC +
Preference number: 2 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEHSAII*HNNAYI
Trigger: GATGTAGGCATTGTTATGGCAAATAATAGCACTGTG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTACAAAGCAAGGTCAATaGAAAAGCCAGGGCATGTGT +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTTKQGQ*KSQGMC
Trigger: ACACATGCCCTGGCTTTTGCATTGACCTTGCTTTGT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTTGTGCTCAGGCTGCATaGAATGTATTGGGAATACAG +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCACAQAA*NVLGIQ
Trigger: CTGTATTCCCAATACATTGCATGCAGCCTGAGCACA...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTTAACCCAGCTGGAATaGGTAACATGGTTACCACAC +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQLTQLE*VTWLPH
Trigger: GTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGCTCAAAGAGAGCAAATaGTTCTGGATTGGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQLKESK*FWIGGG
Trigger: ACCACCACCAATCCAGAACCATTTGCTCTCTTTGAG...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGGTAGGTGATAATTGGTaGACAGTTGCATACCCACAC +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQVGDNW*TVAYPH
Trigger: GTGTGGGTATGCAACTGTCCACCAATTATCACCTAC...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAGGATGAGGGGCAAGTaGATAGGGAAAATGACAAAG +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCARMRGK*IGKMTK
Trigger: CTTTGTCATTTTCCCTATCCACTTGCCCCTCATCCT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCAGCGTGATGTTTACTaGGTGTCCCCTGGTGGGGTA +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCQRDVY*VSPGGV
Trigger: TACCCCACCAGGGGACACCCAGTAAACATCACGCTG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp AATGAGAATGGCCAGCTACTTCCTTCATCGCAGGTCTACATAATCTaGGATTCCAACTCTTGCCACTGCACAATGGCTTTTTCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: NENGQLLPSSQVYII*DSNSCHCTMAFSFE
Trigger: TTCAAAAGAAAAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGATGAAGGAAGTAGCTGGCCATTCTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp GTTTCCAAATGGTGGTCACACGAATCACCTGGGAATCTTTGTAAGTaGGACTTATCCCAGGACATTATGAATCAAAGGTCCAGAATGAGT +
Preference number: 2 (lower is better)
Translates to: VSKWWSHESPGNLCK*DLSQDIMNQRSRMS
Trigger: ACTCATTCTGGACCTTTGATTCATAATGTCCTGGGATAAGTCCAACTTACAAAGATTCCCAGGTGATTCGTGTGACCACCATTTGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCTTAGCTATAACCAAATaGACTAAGTGCTCAGGAACA +
Preference number: 2 (lower is better)
Translates to: GHIGIKTPESESGPSNIGLAITK*TKCSGT
Trigger: TGTTCCTGAGCACTTAGTTCATTTGGTTATAGCTAA...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTGCTATTCTTCAAAAGTaGAGGGTGATCTATTGGGAT +
Preference number: 2 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFAILQK*RVIYWD
Trigger: ATCCCAATAGATCACCCTTCACTTTTGAAGAATAGC...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGATGCTTAGTACCAACTaGTCTGTGGCCTCGATTAAT +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQMLSTN*SVASIN
Trigger: ATTAATCGAGGCCACAGATCAGTTGGTACTAAGCAT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTATAAAGAGGGAAATATaGAGAGCTGGCCTTGAGACA +
Preference number: 2 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAIKREI*RAGLET
Trigger: TGTCTCAAGGCCAGCTCTTCATATTTCCCTCTTTAT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCTATCTGAGCAGAGCTaGAGAAACTATAGCTCTAGT +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTLSEQS*RNYSSS
Trigger: ACTAGAGCTATAGTTTCTGCAGCTCTGCTCAGATAG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTAGAGGGAATATCCAGTaGTACAATGTTCTCAAAGAG +
Preference number: 2 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFRGNIQ*YNVLKE
Trigger: CTCTTTGAGAACATTGTAGCACTGGATATTCCCTCT...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCAGCGGTTCTTCCTTTaGACATCCTTGCTGGTAGCC +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCQRFFL*TSLLVA
Trigger: GGCTACCAGCAAGGATGTGCAAAGGAAGAACCGCTG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGGACAGTTGCTCTATTaGTCAATGCCAGGGGACTGC +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCGQLLY*SMPGDC
Trigger: GCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTTACTGGTTTCCAAATaGTGGTCACACGAATCACCT +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTLLVSK*WSHESP
Trigger: AGGTGATTCGTGTGACCACCATTTGGAAACCAGTAA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAACAAAGCTTGTTCTGTaGATTACCAGATTACCTGAT +
Preference number: 2 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRTKLVL*ITRLPD
Trigger: ATCAGGTAATCTGGTAATCCACAGAACAAGCTTTGT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGAGCCAGGGATGGGAATaGTTTGATTTCTACTCATAT +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQSQGWE*FDFYSY
Trigger: ATATGAGTAGAAATCAAATCATTCCCATCCCTGGCT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGCATGTGTCTGTAGCTaGAAGAGGAGGAAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCACVCS*KRRKEP
Trigger: TGGCTCTTTCCTCCTCTTTCAGCTACAGACACATGC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGAGAATAGGCTTCACTaGGGAACATCTATTCATACA +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTENRLH*GTSIHT
Trigger: TGTATGAATAGATGTTCCTCAGTGAAGCCTATTCTC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTGTGATCATGAAAGATaGACTGCCTTATATCCCACT +
Preference number: 2 (lower is better)
Translates to: PSGISSPLETFLRANQLQCDHER*TALYPT
Trigger: AGTGGGATATAAGGCAGTGCATCTTTCATGATCACA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATTTTGTGTTGGTGTTATaGGTAGAAAGCCTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHFVLVL*VESLGG
Trigger: GCCCCCAAGGCTTTCTACCCATAACACCAACACAAA...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp GAATCAAAGGTCCAGAATGAGTGGCAAGAATTGTATTTTGAAGAGTaGCTTATTTCATACAGCTGTGTTTGCTGGGAGATCAGCTGCATA +
Preference number: 2 (lower is better)
Translates to: ESKVQNEWQELYFEE*LISYSCVCWEISCI
Trigger: TATGCAGCTGATCTCCCAGCAAACACAGCTGTATGAAATAAGCAACTCTTCAAAATACAATTCTTGCCACTCATTCTGGACCTTTGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTCACATCAAGTACAAATaGAACATATACAAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIHIKYK*NIYKQS
Trigger: GCTTTGCTTGTATATGTTGCATTTGTACTTGATGTG...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTTATTTTATGTGCTCTaGAGATCCCAGACCAAAAAC +
Preference number: 2 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTLFYVL*RSQTKN
Trigger: GTTTTTGGTCTGGGATCTGCAGAGCACATAAAATAA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGACGTTGGGCTGAATTaGAAGAACAAAGTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCDVGLN*KNKVLL
Trigger: GAGCAGCACTTTGTTCTTCCAATTCAGCCCAACGTC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTACAAATATGCTTGACTaGCATTTGGAAAGAAGAAAG +
Preference number: 2 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFTNMLD*HLERRK
Trigger: CTTTCTTCTTTCCAAATGCCAGTCAAGCATATTTGT...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp TCTTCACAAACTACAGTCACAATATACACGCAATTGCCTCTGTCCTaGTTCACCAAGAAAGCAGAAGATATTTACAAGTTCCTCAGTCTA +
Preference number: 2 (lower is better)
Translates to: SSQTTVTIYTQLPLS*FTKKAEDIYKFLSL
Trigger: TAGACTGAGGAACTTGTAAATATCTTCTGCTTTCTTGGTGAACAAGGACAGAGGCAATTGCGTGTATATTGTGACTGTAGTTTGTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATCTCAAGGGACCCCGATaGAAGTTGTATATATATGGA +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHLKGPR*KLYIYG
Trigger: TCCATATATATACAACTTTCATCGGGGTCCCTTGAG...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCACTCTAAGGTTAAGATaGAGCCAAGACTGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCTLRLR*SQDCKE
Trigger: CTCCTTGCAGTCTTGGCTCCATCTTAACCTTAGAGT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATAGAATTTTTGGGGTGTaGGAGGAATTCTTGACACCA +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHRIFGV*EEFLTP
Trigger: TGGTGTCAAGAATTCCTCCCACACCCCAAAAATTCT...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATATGCTGTTATCTATGTaGCAAAGCAATCGGAGTGTG +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHMLLSM*QSNRSV
Trigger: CACACTCCGATTGCTTTGCCACATAGATAACAGCAT...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp ATGGTTGCATTTTCTTCACAAACTACAGTCACAATATACACGCAATaGCCTCTGTCCTTGTTCACCAAGAAAGCAGAAGATATTTACAAG +
Preference number: 2 (lower is better)
Translates to: MVAFSSQTTVTIYTQ*PLSLFTKKAEDIYK
Trigger: CTTGTAAATATCTTCTGCTTTCTTGGTGAACAAGGACAGAGGCAATTGCGTGTATATTGTGACTGTAGTTTGTGAAGAAAATGCAACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATATTGGAAGAACAAAGTaGTGCTCAGTAAAAAGCCAG +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHIGRTK*CSVKSQ
Trigger: CTGGCTTTTTACTGAGCAGCACTTTGTTCTTCCAAT...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTACTTGTGCTCAGGCTaGATGCAATGTATTGGGAAT +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCYLCSG*MQCIGN
Trigger: ATTCCCAATACATTGCATGCAGCCTGAGCACAAGTA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATAATTTAACATCAACTTaGCCAGACGTTGGGCTGAAT +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHNLTST*PDVGLN
Trigger: ATTCAGCCCAACGTCTGGCCAAGTTGATGTTAAATT...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 90 bp AATGAAGCCCACCTAAGAATGACTTCTACCAGAAAAATTTGCAATTaGCAAACAAAGCTTGTTCTGTGGATTACCAGATTACCTGATTTC +
Preference number: 2 (lower is better)
Translates to: NEAHLRMTSTRKICN*QTKLVLWITRLPDF
Trigger: GAAATCAGGTAATCTGGTAATCCACAGAACAAGCTTTGTTTGCAAATTGCAAATTTTTCTGGTAGAAGTCATTCTTAGGTGGGCTTCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR TCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATTGCAAGCAATCTAGATaGGATTTCAGGAAAAGAATG +
Preference number: 2 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHCKQSR*DFRKRM
Trigger: CATTCTTTTCCTGAAATCTCATCTAGATTGCTTGCA...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCAGAAAATGTCCAACTTaGGTTTCAAGCATTTACAGT +
Preference number: 2 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCRKCPT*VSSIYS
Trigger: ACTGTAAATGCTTGAAACGCAAGTTGGACATTTTCT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp GGCAGGCGAGGCTGCCTGTCACAAGGGAGGTCAGTCTaGTTTGTTAAGGCCCTCGGCTTCTTCCAAAGAGCA +
Preference number: 3 (lower is better)
Translates to: GRRGCLSQGRSV*FVKALGFFQRA
Trigger: TGCTCTTTGGAAGAAGCCGAGGGCCTTAACAAATCAGACTGACCTCCCTTGTGACAGGCAGCCTCGCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp TTAATTGGGCCACAGAGTCCAGACAGGTCAATCAGCTaGCCAAGGTGCCCTCAATCCCCAGCACCCAGAGTG +
Preference number: 3 (lower is better)
Translates to: LIGPQSPDRSIS*PRCPQSPAPRV
Trigger: CACTCTGGGTGCTGGGGATTGAGGGCACCTTGGCCAGCTGATTGACCTGTCTGGACTCTGTGGCCCAATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp CATGGCCAGGTACCTGACATCAAGGTCACAGACAGATaGCACAGTAGTCATAGTCAGCACTGCCAGGCACAC +
Preference number: 3 (lower is better)
Translates to: HGQVPDIKVTDR*HSSHSQHCQAH
Trigger: GTGTGCCTGGCAGTGCTGACTATGACTACTGTGCCATCTGTCTGTGACCTTGATGTCAGGTACCTGGCCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp GGAACCTCAGTGCCTTTCCAGATATGTAGAGCCAAGTaGGCTTACTGGGTGCCTTGTTCTTCCCCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: GTSVPFQICRAK*AYWVPCSSPAP
Trigger: AGGAGCAGGGGAAGAACAAGGCACCCAGTAAGCTCACTTGGCTCTACATATCTGGAAAGGCACTGAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp AGCCAAGTGAGCTTACTGGGTGCCTTGTTCTTCCCCTaGTCCTTTGCAGGCACTGTTTTGTGGGTACCTGTA +
Preference number: 3 (lower is better)
Translates to: SQVSLLGALFFP*SFAGTVLWVPV
Trigger: TACAGGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGTAAGCTCACTTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp GTGTCCCCTGGTGGGGTAGAGACCTTGGAACCTCAGTaGCTTTCCAGATATGTAGAGCCAAGTGAGCTTACT +
Preference number: 3 (lower is better)
Translates to: VSPGGVETLEPQ*LSRYVEPSELT
Trigger: AGTAAGCTCACTTGGCTCTACATATCTGGAAAGGCACTGAGGTTCCAAGGTCTCTACCCCACCAGGGGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp GAAGTACACTCACAACTAGTGGTGAGAAAGGACAGTTaGTCTATTGCTCAATGCCAGGGGACTGCAGGGGCC +
Preference number: 3 (lower is better)
Translates to: EVHSQLVVRKDS*SIAQCQGTAGA
Trigger: GGCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACCACTAGTTGTGAGTGTACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGGTGAGAAAGGACAGTaGCTCTATTGCTCAATGCCA +
Preference number: 3 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQGEKGQ*LYCSMP
Trigger: TGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp CTGCCTTATATCCCACTCACCACAGAGGGACCATCTTaGTGTAGAATGACTGAATGGACTGGTGAGGACTGC +
Preference number: 3 (lower is better)
Translates to: LPYIPLTTEGPS*CRMTEWTGEDC
Trigger: GCAGTCCTCACCAGTCCATTCAGTCATTCTACAGCAAGATGGTCCCTCTGTGGTGAGTGGGATATAAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp CTTATTTCATACAGCTGTGTTTGCTGGGAGATCAGCTaGATAATCCGGGTCCTAACCCCAGAACCCCAGGGT +
Preference number: 3 (lower is better)
Translates to: LISYSCVCWEIS*IIRVLTPEPQG
Trigger: ACCCTGGGGTTCTGGGGTTAGGACCCGGATTATGCAGCTGATCTCCCAGCAAACACAGCTGTATGAAATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp CTTTCCAGATATGTAGAGCCAAGTGAGCTTACTGGGTaGCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGT +
Preference number: 3 (lower is better)
Translates to: LSRYVEPSELTG*LVLPLLLCRHC
Trigger: ACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGTAAGCTCACTTGGCTCTACATATCTGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp CTCACAACTAGTGGTGAGAAAGGACAGTTGCTCTATTaGTCAATGCCAGGGGACTGCAGGGGCCAAATGTGT +
Preference number: 3 (lower is better)
Translates to: LTTSGEKGQLLY*SMPGDCRGQMC
Trigger: ACACATTTGGCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACCACTAGTTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp CCATTCCTTGGCTTCCCCACCAAATTAGGTTTCTCTTaGCACTCACATTCACGGATAAGTAGTGGCTCGGGC +
Preference number: 3 (lower is better)
Translates to: PFLGFPTKLGFS*HSHSRISSGSG
Trigger: GCCCGAGCCACTACTTATCCGTGAATGTGAGTGCCAAGAGAAACCTAATTTGGTGGGGAAGCCAAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp GTTGAGTGCAACTTAAACTCTCAGCGTGATGTTTACTaGGTGTCCCCTGGTGGGGTAGAGACCTTGGAACCT +
Preference number: 3 (lower is better)
Translates to: VECNLNSQRDVY*VSPGGVETLEP
Trigger: AGGTTCCAAGGTCTCTACCCCACCAGGGGACACCCAGTAAACATCACGCTGAGAGTTTAAGTTGCACTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGCTTATTGGGTAAGATaGCAGCTGTCAAGCATGAAC +
Preference number: 3 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQAYWVR*QLSSMN
Trigger: GTTCATGCTTGACAGCTGCAATCTTACCCAATAAGC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCGGCTTAAACAGAAACTaGTGCCTAGTGCATTCAAAC +
Preference number: 3 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTGLNRN*CLVHSN
Trigger: GTTTGAATGCACTAGGCACAAGTTTCTGTTTAAGCC...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp TGGCCAAGATCCTCCTCCACTTTAACCCAGCTGGAATaGGTAACATGGTTACCACACTTTAGGGTACACAGG +
Preference number: 3 (lower is better)
Translates to: WPRSSSTLTQLE*VTWLPHFRVHR
Trigger: CCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAAAGTGGAGGAGGATCTTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCTTGGATTCCAACTCTaGCCACTGCACAATGGCTTT +
Preference number: 3 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVLGFQL*PLHNGF
Trigger: AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGGGAATCTTTGTAAGTaGGACTTATCCCAGGACATT +
Preference number: 3 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQGNLCK*DLSQDI
Trigger: AATGTCCTGGGATAAGTCCAACTTACAAAGATTCCC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp ACTTCTCTGTTTGGTGTCAGGAAAAGAGCCAGAGGGTaGAGGCATACTTGTGCTCAGGCTGCATGCAATGTA +
Preference number: 3 (lower is better)
Translates to: TSLFGVRKRARG*RHTCAQAACNV
Trigger: TACATTGCATGCAGCCTGAGCACAAGTATGCCTTCACCCTCTGGCTCTTTTCCTGACACCAAACAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp GAGAGAACACCCAGCCTAGTGCATGGGTTGGGATTATaGGAGACACTAAATTTAGGCTGGAATGGCCTTACA +
Preference number: 3 (lower is better)
Translates to: ERTPSLVHGLGL*ETLNLGWNGLT
Trigger: TGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGTGTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCGCAAATGGTTCTGGATaGGTGGTGGTGCACACAATG +
Preference number: 3 (lower is better)
Translates to: GHIGIKTPESESGPSNIGANGSG*VVVHTM
Trigger: CATTGTGTGCACCACCACCAATCCAGAACCATTTGC...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCCCAGTTCACTGCACTaGACTACACAAGCCTGGGAG +
Preference number: 3 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTPSSLH*TTQAWE
Trigger: CTCCCAGGCTTGTGTAGTCAAGTGCAGTGAACTGGG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCCTTGAAAACATATTGTaGTGTTTTCAGCTGGTTGAC +
Preference number: 3 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTLENIL*CFQLVD
Trigger: GTCAACCAGCTGAAAACACAACAATATGTTTTCAAG...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTAGCTTGCTCTCCACCTaGTCTTTGGGCTTGCATCCA +
Preference number: 3 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTSLLST*SLGLHP
Trigger: TGGATGCAAGCCCAAAGACAAGGTGGAGAGCAAGCT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGAATATTTGAACACCTaGGGATCCAATAATATGCTC +
Preference number: 3 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQEYLNT*GSNNML
Trigger: GAGCATATTATTGGATCCCAAGGTGTTCAAATATTC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp GTCACAGACAGATGGCACAGTAGTCATAGTCAGCACTaGCAGGCACACAACACTACTAAACATACAGCACTT +
Preference number: 3 (lower is better)
Translates to: VTDRWHSSHSQH*QAHNTTKHTAL
Trigger: AAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTACTGTGCCATCTGTCTGTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTaGACAGTATGGGTTCAGATCTGGATCTTGAAATAT +
Preference number: 3 (lower is better)
Translates to: PGLLAVSALVLF*TVWVQIWILKY
Trigger: ATATTTCAAGATCCAGATCTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp CAGGCAGTGCTATGCTGGAGCTGGCTCATGCTGTATTaGAGCCAACTTATACTGGCTCTTGAAAACATATTG +
Preference number: 3 (lower is better)
Translates to: QAVLCWSWLMLY*SQLILALENIL
Trigger: CAATATGTTTTCAAGAGCCAGTATAAGTTGGCTCCAATACAGCATGAGCCAGCTCCAGCATAGCACTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp TATTGGAAAGAATTTTTGGGGTGTGGGAGGAATTCTTaGCACCACCATTTAGCCCTGTCTCCCTTGGATCTG +
Preference number: 3 (lower is better)
Translates to: YWKEFLGCGRNS*HHHLALSPLDL
Trigger: CAGATCCAAGGGAGACAGGGCTAAATGGTGGTGTCAAGAATTCCTCCCACACCCCAAAAATTCTTTCCAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp ATCCACAACATAGGCTTTCTTTGTGATCATGAAAGATaGACTGCCTTATATCCCACTCACCACAGAGGGACC +
Preference number: 3 (lower is better)
Translates to: IHNIGFLCDHER*TALYPTHHRGT
Trigger: GGTCCCTCTGTGGTGAGTGGGATATAAGGCAGTGCATCTTTCATGATCACAAAGAAAGCCTATGTTGTGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp GTACTCACTGACTTAAAAATTGTTCAGGCAGTGCTATaGTGGAGCTGGCTCATGCTGTATTGGAGCCAACTT +
Preference number: 3 (lower is better)
Translates to: VLTDLKIVQAVL*WSWLMLYWSQL
Trigger: AAGTTGGCTCCAATACAGCATGAGCCAGCTCCAGCATAGCACTGCCTGAACAATTTTTAAGTCAGTGAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp CATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTaGAATGGCCTTACAGATGTGGCCACAGTGCTATTA +
Preference number: 3 (lower is better)
Translates to: HGLGLWETLNLG*NGLTDVATVLL
Trigger: TAATAGCACTGTGGCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp TTTGAAGAGTTGCTTATTTCATACAGCTGTGTTTGCTaGGAGATCAGCTGCATAATCCGGGTCCTAACCCCA +
Preference number: 3 (lower is better)
Translates to: FEELLISYSCVC*EISCIIRVLTP
Trigger: TGGGGTTAGGACCCGGATTATGCAGCTGATCTCCCAGCAAACACAGCTGTATGAAATAAGCAACTCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp GACTTAAAAATTGTTCAGGCAGTGCTATGCTGGAGCTaGCTCATGCTGTATTGGAGCCAACTTATACTGGCT +
Preference number: 3 (lower is better)
Translates to: DLKIVQAVLCWS*LMLYWSQLILA
Trigger: AGCCAGTATAAGTTGGCTCCAATACAGCATGAGCCAGCTCCAGCATAGCACTGCCTGAACAATTTTTAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp GAAGGCATACTTGTGCTCAGGCTGCATGCAATGTATTaGGAATACAGACATCTGAACATGCACCTGACTCAT +
Preference number: 3 (lower is better)
Translates to: EGILVLRLHAMY*EYRHLNMHLTH
Trigger: ATGAGTCAGGTGCATGTTCAGATGTCTGTATTCCCAATACATTGCATGCAGCCTGAGCACAAGTATGCCTTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAGACGTTGGGCTGAATaGGAAGAACAAAGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCARRWAE*EEQSAA
Trigger: AGCAGCACTTTGTTCTTCCAATTCAGCCCAACGTCT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATGCAGCGGTTCTTCCTTaGCACATCCTTGCTGGTAGC +
Preference number: 3 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHAAVLP*HILAGS
Trigger: GCTACCAGCAAGGATGTGCAAAGGAAGAACCGCTGC...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTCAAGCATCTCCTTTATaGTTCTGTGTTGGGAAGTCA +
Preference number: 3 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIQASPL*FCVGKS
Trigger: TGACTTCCCAACACAGAACAATAAAGGAGATGCTTG...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp TTGCATGGTCAGCTAGAAGCTGCTATTCTTCAAAAGTaGAGGGTGATCTATTGGGATCATCTCCAGGAAGTC +
Preference number: 3 (lower is better)
Translates to: LHGQLEAAILQK*RVIYWDHLQEV
Trigger: GACTTCCTGGAGATGATCCCAATAGATCACCCTTCACTTTTGAAGAATAGCAGCTTCTAGCTGACCATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp ACAGTTGGTAATCTCCCAAGATACTGGGGAGTCTGTTaGGAGGTTCCTAAGAGTCACGTGGAATATTTGAAC +
Preference number: 3 (lower is better)
Translates to: TVGNLPRYWGVC*EVPKSHVEYLN
Trigger: GTTCAAATATTCCACGTGACTCTTAGGAACCTCTCAACAGACTCCCCAGTATCTTGGGAGATTACCAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp GAATGGCCTTACAGATGTGGCCACAGTGCTATTATTTaGCATAACAATGCCTACATCAAGAGACGCAATGCT +
Preference number: 3 (lower is better)
Translates to: EWPYRCGHSAII*HNNAYIKRRNA
Trigger: AGCATTGCGTCTCTTGATGTAGGCATTGTTATGGCAAATAATAGCACTGTGGCCACATCTGTAAGGCCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp AGCCTTACATCACATGACACCTTATCCTACAAAGTTTaGCCAGTCAGCAATGAAGTTGCCCAGAGATATTCC +
Preference number: 3 (lower is better)
Translates to: SLTSHDTLSYKV*PVSNEVAQRYS
Trigger: GGAATATCTCTGGGCAACTTCATTGCTGACTGGGCAAACTTTGTAGGATAAGGTGTCATGTGATGTAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATaGCCTTACAGATGTGGCCACAGTGCTATTATTTGC +
Preference number: 3 (lower is better)
Translates to: VGIMGDTKFRLE*PYRCGHSAIIC
Trigger: GCAAATAATAGCACTGTGGCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp AATTTAACATCAACTTGGCCAGACGTTGGGCTGAATTaGAAGAACAAAGTGCTGCTCAGTAAAAAGCCAGGG +
Preference number: 3 (lower is better)
Translates to: NLTSTWPDVGLN*KNKVLLSKKPG
Trigger: CCCTGGCTTTTTACTGAGCAGCACTTTGTTCTTCCAATTCAGCCCAACGTCTGGCCAAGTTGATGTTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCAGGTCTACATAATCTaGGATTCCAACTCTTGCCAC +
Preference number: 3 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTQVYII*DSNSCH
Trigger: GTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp TGTCCTAGCATTCTACAATATTGTCCCTGCTTCCTTTaGTCTCAGGTCAATACCGCTTTGTTGTCTGAGAGT +
Preference number: 3 (lower is better)
Translates to: CPSILQYCPCFL*SQVNTALLSES
Trigger: ACTCTCAGACAACAAAGCGGTATTGACCTGAGATCAAAGGAAGCAGGGACAATATTGTAGAATGCTAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR GCA 72 bp GGAAACTTTTCTAAGGGCAAATCAACTCCAGTTGAGTaGAACTTAAACTCTCAGCGTGATGTTTACTGGGTG +
Preference number: 3 (lower is better)
Translates to: GNFSKGKSTPVE*NLNSQRDVYWV
Trigger: CACCCAGTAAACATCACGCTGAGAGTTTAAGTTGCACTCAACTGGAGTTGATTTGCCCTTAGAAAAGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp TCAGCAATGAAGTTGCCCAGAGATATTCCTACCAAGTaGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGC +
Preference number: 3 (lower is better)
Translates to: SAMKLPRDIPTK*YFFTVGNFSKG
Trigger: GCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGGTAGGAATATCTCTGGGCAACTTCATTGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCGCTATTCAATTTGATTaGGGGCACTTTTTAAACAGC +
Preference number: 3 (lower is better)
Translates to: GHIGIKTPESESGPSNIGAIQFD*GHFLNS
Trigger: GCTGTTTAAAAAGTGCCCCAAATCAAATTGAATAGC...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp ATCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTaGTCACCCTTGTTATACTGGGTTAGTCTTAGAACT +
Preference number: 3 (lower is better)
Translates to: IQQRWYKATSNN*SPLLYWVSLRT
Trigger: AGTTCTAAGACTAACCCAGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp AATGAGGCAGGCACATTCACACTTAACAAGTACATTTaGGGAGCTGTCGAAGCAAATGGTTGCATTTTCTTC +
Preference number: 3 (lower is better)
Translates to: NEAGTFTLNKYI*GAVEANGCIFF
Trigger: GAAGAAAATGCAACCATTTGCTTCGACAGCTCCTCAAATGTACTTGTTAAGTGTGAATGTGCCTGCCTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CCA 72 bp CTGCACAGTATGGGTTCAGATCTGGATCTTGAAATATaGCTAAAGAGCACTTCTAACATGGGGTACAGTTAT +
Preference number: 3 (lower is better)
Translates to: LHSMGSDLDLEI*LKSTSNMGYSY
Trigger: ATAACTGTACCCCATGTTAGAAGTGCTCTTTAGCCATATTTCAAGATCCAGATCTGAACCCATACTGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGAAGATGAATAGCTTATaGGGTAAGATTGCAGCTGTC +
Preference number: 3 (lower is better)
Translates to: PSGISSPLETFLRANQLQKMNSL*GKIAAV
Trigger: GACAGCTGCAATCTTACCCAATAAGCTATTCATCTT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTATTTGCAAACAAAGCTaGTTCTGTGGATTACCAGAT +
Preference number: 3 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAICKQS*FCGLPD
Trigger: ATCTGGTAATCCACAGAACAAGCTTTGTTTGCAAAT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp AGATTTTTGTTTTTCATGGTCCAGCCTTACATCACATaGCACCTTATCCTACAAAGTTTGCCCAGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: RFLFFMVQPYIT*HLILQSLPSQQ
Trigger: TTGCTGACTGGGCAAACTTTGTAGGATAAGGTGTCATGTGATGTAAGGCTGGACCATGAAAAACAAAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp TCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTaGTACCCATCAAATTATACCACTGAATTACAAAAT +
Preference number: 3 (lower is better)
Translates to: SSKGQGTNTVWL*YPSNYTTELQN
Trigger: ATTTTGTAATTCAGTGGTATAATTTGATGGGTATCACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp AGCAACTGGTCAATTCGGCTGAAACAGCTGAATTGTTaGATCACTAAGACTGTGTCTATATTGCCATTTAAC +
Preference number: 3 (lower is better)
Translates to: SNWSIRLKQLNC*ITKTVSILPFN
Trigger: GTTAAATGGCAATATAGACACAGTCTTAGTGATTCAACAATTCAGCTGTTTCAGCCGAATTGACCAGTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTTTTTAAACAGCCATTaGGCGCTTTCCGTTTGGAGT +
Preference number: 3 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCFLNSH*ALSVWS
Trigger: ACTCCAAACGGAAAGCGCCAAATGGCTGTTTAAAAA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGGGAAAATGACAAAGTaGGGGAAACAAGTGATGAAC +
Preference number: 3 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCGKMTK*GKQVMN
Trigger: GTTCATCACTTGTTTCCCCAACTTTGTCATTTTCCC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR TCA 72 bp TTAAACAGTTATTTGTCGCATTGCAAGCAATCTAGATaGGATTTCAGGAAAAGAATGAGCTACCCCACTCAA +
Preference number: 3 (lower is better)
Translates to: LNSYLSHCKQSR*DFRKRMSYPTQ
Trigger: TTGAGTGGGGTAGCTCATTCTTTTCCTGAAATCTCATCTAGATTGCTTGCAATGCGACAAATAACTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGCAACGGAAGTAGATTaGGTCCTTCATGATCTAATT +
Preference number: 3 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCATEVD*VLHDLI
Trigger: AATTAGATCATGAAGGACCAAATCTACTTCCGTTGC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTTTCTAAACACTCAGTaGGAAGTACACTCACAACTA +
Preference number: 3 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCFLNTQ*EVHSQL
Trigger: TAGTTGTGAGTGTACTTCCAACTGAGTGTTTAGAAA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGCATCAAGTGTTGAGTaGCGGGGTGAGCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQASSVE*RGERAG
Trigger: CCCTGCCCGCTCACCCCGTCACTCAACACTTGATGC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGCCGAGCAGGAAGATaGAGGGGCTGCGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLECRAGR*RGCAAA
Trigger: CGCCGCCGCGCAGCCCCTCCATCTTCCTGCTCGGCA...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCAGTCACCTGGGCACCTaGCCTGGCCAAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTSHLGT*PGQDPP
Trigger: AGGAGGATCTTGGCCAGGCCAGGTGCCCAGGTGACT...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp TCTCTTGGGTCTCTGTGGCCCTCACATTCTGGCAGCTaGTTTCCAAGGGCAGGCGAGGCTGCCTGTCACAAG +
Preference number: 4 (lower is better)
Translates to: SLGSLWPSHSGS*FPRAGEAACHK
Trigger: CTTGTGACAGGCAGCCTCGCCTGCCCTTGGAAACAAGCTGCCAGAATGTGAGGGCCACAGAGACCCAAGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCGGAAGATGGAGGGGCTaGGCGGCGGCGTGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGGRWRG*AAAWRR
Trigger: CCTTCGCCACGCCGCCGCGCAGCCCCTCCATCTTCC...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACATCCCGGGCTGGGCTaGGTTCAGGGAAACCGGGGA +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEHPGLG*VQGNRG
Trigger: TCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGATG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp GGCGAGGCTGCCTGTCACAAGGGAGGTCAGTCTGATTaGTTAAGGCCCTCGGCTTCTTCCAAAGAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: GEAACHKGGQSD*LRPSASSKEQE
Trigger: CTCTTGCTCTTTGGAAGAAGCCGAGGGCCTTAACAAATCAGACTGACCTCCCTTGTGACAGGCAGCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGTTCAGGCAGTGCTATaGTGGAGCTGGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQVQAVL*WSWLML
Trigger: CAGCATGAGCCAGCTCCAGCATAGCACTGCCTGAAC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGACCCCAGCACCCAGAGTaGTCTATCTGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRPQHPE*SIWAAS
Trigger: GCTGGCAGCCCAGATAGAGCACTCTGGGTGCTGGGG...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGAGTGAGCTTACTGGGTaGCTTGTTCTTCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQSELTG*LVLPLL
Trigger: GAGCAGGGGAAGAACAAGGCACCCAGTAAGCTCACT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCTCAATGCCAGGGGACTaGAGGGGCCAAATGTGTATT +
Preference number: 4 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTSMPGD*RGQMCI
Trigger: AATACACATTTGGCCCCTGCAGTCCCCTGGCATTGA...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATCAGCAGGCAGCTGGTaGGACTCCTGCCACTTGGTG +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLESAGSW*DSCHLV
Trigger: CACCAAGTGGCAGGAGTCCCACCAGCTGCCTGCTGA...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCACGGTGGTGGGGGATaGGAAAGTCCTCCCACTCTA +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVHGGGG*ESPPTL
Trigger: TAGAGTGGGAGGACTTTCCCATCCCCCACCACCGTG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp GGAAGTACACTCACAACTAGTGGTGAGAAAGGACAGTaGCTCTATTGCTCAATGCCAGGGGACTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GSTLTTSGEKGQ*LYCSMPGDCRG
Trigger: GCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACCACTAGTTGTGAGTGTACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp GGATCTCAGCCTGTTACTCAACTCCTCCCAGGGCTCTaGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: GSQPVTQLLPGL*AVSALVLFCTV
Trigger: TACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGGGAGGAGTTGAGTAACAGGCTGAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGGGAAATCGGTCCATTaGGCGGCCAGCAGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFGKSVH*AASSSL
Trigger: CAGCGAGCTGCTGGCCGCTCAATGGACCGATTTCCC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGTGCAGAGGGAAGGAGTaGGATGGTGATAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQCRGKE*DGDRDG
Trigger: TCCATCTCTATCACCATCTCACTCCTTCCCTCTGCA...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGTACTGGGGAGTCTGTTaGGAGGTTCCTAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQYWGVC*EVPKSH
Trigger: GTGACTCTTAGGAACCTCTCAACAGACTCCCCAGTA...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGAAAAGAGCCAGAGGGTaGAGGCATACTTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQKRARG*RHTCAQ
Trigger: CTGAGCACAAGTATGCCTTCACCCTCTGGCTCTTTT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGACAGCAAAACAGGTCCTaGCCCAGTTGGCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRQQNRS*PSWPEA
Trigger: GGCCTCTGGCCAACTGGGGCAGGACCTGTTTTGCTG...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTATCAGCTGGCCAAGGTaGCCTCAATCCCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIISWPR*PQSPAP
Trigger: GGGTGCTGGGGATTGAGGGCACCTTGGCCAGCTGAT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGATTTCTTGTCCACACTaGCTCCCTGTCAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQISCPH*LPVRIP
Trigger: TGGGATCCTGACAGGGAGCCAGTGTGGACAAGAAAT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACAAGGGAGGTCAGTCTaGTTTGTTAAGGCCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEQGRSV*FVKALG
Trigger: GCCGAGGGCCTTAACAAATCAGACTGACCTCCCTTG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGCGCGCGGGGCCCGGTaGCGAGCAGGAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCARGAR*RAGRWR
Trigger: CCTCCATCTTCCTGCTCGGCACCGGGCCCCGCGCGC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCTGCTCTATTGCTCAATaGCAGGGGACTGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGCSIAQ*QGTAGA
Trigger: GGCCCCTGCAGTCCCCTGGCATTGAGCAATAGAGCA...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTAAGGGCAGGCGAGGCTaGCTGTCACAAGGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFKGRRG*LSQGRS
Trigger: TGACCTCCCTTGTGACAGGCAGCCTCGCCTGCCCTT...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACGGCCAGCAGCTCGCTaGCGTGTATATATGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLERPAAR*RVYMCV
Trigger: CACACACATATATACACGCCAGCGAGCTGCTGGCCG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGCCTGGGCACCTGGCCTaGCCAAGATCCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQPGHLA*PRSSST
Trigger: AGTGGAGGAGGATCTTGGCCAGGCCAGGTGCCCAGG...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACCAGAGTGCTCTATCTaGGCTGCCAGCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEPECSI*AASHKH
Trigger: GTGTTTGTGGCTGGCAGCCCAGATAGAGCACTCTGG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGGTGGCCTCGATTAATTaGGCCACAGAGTCCAGACAG +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVVASIN*ATESRQ
Trigger: CTGTCTGGACTCTGTGGCCCAATTAATCGAGGCCAC...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACAGCGTGATGTTTACTaGGTGTCCCCTGGTGGGGTA +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEQRDVY*VSPGGV
Trigger: TACCCCACCAGGGGACACCCAGTAAACATCACGCTG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAACAGAGTCAGCTTGGTaGGCCCTTCCCCATGCATTC +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRTESAW*ALPHAF
Trigger: GAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACCAATGGTCCTGAGCTaGTTACTGCCCAGTTCACTG +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEPMVLS*LLPSSL
Trigger: CAGTGAACTGGGCAGTAATCAGCTCAGGACCATTGG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTCCATGGCCAGGTACCTaGCATCAAGGTCACAGACAG +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIPWPGT*HQGHRQ
Trigger: CTGTCTGTGACCTTGATGTCAGGTACCTGGCCATGG...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTCGACCCGGGCCATTTTaGAGTTTCTCATCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIRPGPF*SFSSRA
Trigger: AGCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCG...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCACAAGCCTGGGAGCTaGAGGAGAGCCAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAHKPGS*RRASCL
Trigger: AAGGCAGCTGGCTCTCCTGCAGCTCCCAGGCTTGTG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTAACTCAGCAGGCAGCTaGTGGGACTCCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFNSAGS*WDSCHL
Trigger: CAAGTGGCAGGAGTCCCACCAGCTGCCTGCTGAGTT...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCAGGTCCTGCCCCAGTTaGCCAGAGGCCTCTGATTAT +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGRSCPS*PEASDY
Trigger: ATAATCAGAGGCCTCTGGCCAACTGGGGCAGGACCT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCATGCTGTTATCTATGTaGCAAAGCAATCGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTMLLSM*QSNRSV
Trigger: CACACTCCGATTGCTTTGCCACATAGATAACAGCAT...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGTACAGCTGTGTTTGCTaGGAGATCAGCTGCATAATC +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQYSCVC*EISCII
Trigger: GATTATGCAGCTGATCTCCCAGCAAACACAGCTGTA...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACAGGCAGTGCTATGCTaGAGCTGGCTCATGCTGTAT +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEQAVLC*SWLMLY
Trigger: ATACAGCATGAGCCAGCTCCAGCATAGCACTGCCTG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTGTGGCCCTCACATTCTaGCAGCTTGTTTCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIVALTF*QLVSKG
Trigger: GCCCTTGGAAACAAGCTGCCAGAATGTGAGGGCCAC...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTATTCGGTACAGCAGCTaGAACTCAGCAGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIIRYSS*NSAGSW
Trigger: CCAGCTGCCTGCTGAGTTTCAGCTGCTGTACCGAAT...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTCTTCCCCTGCTCCTTTaGAGGCACTGTTTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHILPLLL*RHCFVG
Trigger: ACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAG...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTTTCTCATCCCGGGCTaGGCTGGGTTCAGGGAAACC +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQFLIPG*AGFRET
Trigger: GGTTTCCCTGAACCCAGCCCAGCCCGGGATGAGAAA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATCCAGCCCCAGCACACTaGCGACCCGGGCCATTTTGC +
Preference number: 4 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHPAPAH*RPGPFC
Trigger: GCAAAATGGCCCGGGTCGCCAGTGTGCTGGGGCTGG...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCACCCAGCCTAGTGCATaGGTTGGGATTATGGGAGAC +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGTQPSA*VGIMGD
Trigger: GTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGAAGGTAGGTGATAATTaGTGGACAGTTGCATACCCA +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQKVGDN*WTVAYP
Trigger: TGGGTATGCAACTGTCCACCAATTATCACCTACCTT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGACAGGTCAATCAGCTaGCCAAGGTGCCCTCAATCC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFDRSIS*PRCPQS
Trigger: GGATTGAGGGCACCTTGGCCAGCTGATTGACCTGTC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGTTACTGGTTTCCAAATaGTGGTCACACGAATCACCT +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQLLVSK*WSHESP
Trigger: AGGTGATTCGTGTGACCACCATTTGGAAACCAGTAA...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGCTATTCTTCAAAAGTaGAGGGTGATCTATTGGGAT +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQAILQK*RVIYWD
Trigger: ATCCCAATAGATCACCCTTCACTTTTGAAGAATAGC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAAACTAATGATGCTTGGTaGCCGGATCTCAGCCTGTTA +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLETNDAW*PDLSLL
Trigger: TAACAGGCTGAGATCCGGTCACCAAGCATCATTAGT...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGTGGACTGGTGAGGACTaGATCAGAGGCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVWTGED*IRGISL
Trigger: TAAAGAAATGCCTCTGATGCAGTCCTCACCAGTCCA...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTTGCTGGGAGATCAGCTaGATAATCCGGGTCCTAACC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFCWEIS*IIRVLT
Trigger: GGTTAGGACCCGGATTATGCAGCTGATCTCCCAGCA...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGCCTTGTTCTTCCCCTaGTCCTTTGCAGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFALFFP*SFAGTV
Trigger: AACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCTTATCCTACAAAGTTTaGCCAGTCAGCAATGAAGTT +
Preference number: 4 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTLSYKV*PVSNEV
Trigger: AACTTCATTGCTGACTGGGCAAACTTTGTAGGATAA...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGGACAGTTGCTCTATTaGTCAATGCCAGGGGACTGC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFGQLLY*SMPGDC
Trigger: GCAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCATCAAAGGAACCCTTTaGTATCACTGTTGTCTAAAG +
Preference number: 4 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTIKGTL*YHCCLK
Trigger: CTTTAGACAACAGTGATACCAAAGGGTTCCTTTGAT...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTGGAAGCAGCACAGTGTaGTGTAGCAGAATCAGTGGT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIGSSTV*CSRISG
Trigger: ACCACTGATTCTGCTACACCACACTGTGCTGCTTCC...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCAGCTGTCGAAGCAAATaGTTGCATTTTCTTCACAAA +
Preference number: 4 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTSCRSK*LHFLHK
Trigger: TTTGTGAAGAAAATGCAACCATTTGCTTCGACAGCT...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTTTCTTAGGCACAGTGTaGCAGAGTCAGCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIFLGTV*QSQLGE
Trigger: CTCACCAAGCTGACTCTGTCACACTGTGCCTAAGAA...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGGCCAGACGTTGGGCTaGATTGGAAGAACAAAGTGC +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTGQTLG*IGRTKC
Trigger: GCACTTTGTTCTTCCAATTCAGCCCAACGTCTGGCC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTGCATGTGTCTGTAGCTaGAAGAGGAGGAAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIACVCS*KRRKEP
Trigger: TGGCTCTTTCCTCCTCTTTCAGCTACAGACACATGC...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCAAACCACTTTCCCTGTaGGCCCAGCTTCATTTGATG +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGKPLSL*AQLHLM
Trigger: CATCAAATGAAGCTGGGCTCACAGGGAAAGTGGTTT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAAGTCATAGTCAGCACTaGCAGGCACACAACACTACT +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRSHSQH*QAHNTT
Trigger: AGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCAGCGGTTCTTCCTTTaGACATCCTTGCTGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAQRFFL*TSLLVA
Trigger: GGCTACCAGCAAGGATGTGCAAAGGAAGAACCGCTG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGTGCTCAGGCTGCATaGAATGTATTGGGAATACAG +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLECAQAA*NVLGIQ
Trigger: CTGTATTCCCAATACATTGCATGCAGCCTGAGCACA...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTGTGAAGGCATACTTGTaGTCAGGCTGCATGCAATGT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIVKAYL*SGCMQC
Trigger: ACATTGCATGCAGCCTGAGCACAAGTATGCCTTCAC...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGACTTTATTCCACTTATaGAGGTTGACCAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQTLFHL*RLTKPL
Trigger: AAGAGGTTTGGTCAACCTGCATAAGTGGAATAAAGT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGCTTCCAACATCTCTTTaGAAAGCCTCCGTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQLPTSL*KASVGA
Trigger: CGCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAG...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGATCTTCCCTTGTGTTaGGGTCAAATCCAAACGGCC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFDLPLC*GQIQTA
Trigger: GGCCGTTTGGATTTGACCCCAACACAAGGGAAGATC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTGACGTTGGGCTGAATTaGAAGAACAAAGTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIDVGLN*KNKVLL
Trigger: GAGCAGCACTTTGTTCTTCCAATTCAGCCCAACGTC...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGATGGGTAGAAAGCCTTaGGGGCTTTATGGTAAAATG +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVMGRKP*GLYGKM
Trigger: CATTTTACCATAAAGCCCCCAAGGCTTTCTACCCAT...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCTTTGTGTTGGTGTTATaGGTAGAAAGCCTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGFVLVL*VESLGG
Trigger: GCCCCCAAGGCTTTCTACCCATAACACCAACACAAA...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGTGCTATGCTGGAGCTaGCTCATGCTGTATTGGAGC +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTVLCWS*LMLYWS
Trigger: GCTCCAATACAGCATGAGCCAGCTCCAGCATAGCAC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGATTTGTTTTGTGTCCTaGGAGAATTTCAGTGCTAAC +
Preference number: 4 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQICFVS*ENFSAN
Trigger: GTTAGCACTGAAATTCTCCCAGGACACAAAACAAAT...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp GGCCAGCTACTTCCTTCATCGCAGGTCTACATAATCTaGGATTCCAACTCTTGCCACTGCACAATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GQLLPSSQVYII*DSNSCHCTMAF
Trigger: AAAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGATGAAGGAAGTAGCTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTCCTGGTCACAGTTGCTaGAGTGTGGAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIPGHSC*SVEEKC
Trigger: GCATTTTTCTTCCACACTTCAGCAACTGTGACCAGG...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCCCCAGGGTCTTAAGCTaGTTCATTGCCTCTATATTC +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGPRVLS*FIASIF
Trigger: GAATATAGAGGCAATGAATCAGCTTAAGACCCTGGG...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTGGTGGTGCACACAATaGTACGGAAAACGATCGCAC +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQWWCTQ*YGKRSH
Trigger: GTGCGATCGTTTTCCGTATCATTGTGTGCACCACCA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGAATTCTAAAGATGAGTaGCCTGAGATCTGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVNSKDE*PEICLL
Trigger: TAAGAGGCAGATCTCAGGTCACTCATCTTTAGAATT...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCTTAAACTCTCAGCGTaGTGTTTACTGGGTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTLKLSA*CLLGVP
Trigger: GGGGACACCCAGTAAACATCACGCTGAGAGTTTAAG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTTTGCCCAGTCAGCAATaGAGTTGCCCAGAGATATTC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFLPSQQ*SCPEIF
Trigger: GAATATCTCTGGGCAACTTCATTGCTGACTGGGCAA...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTGAGCAAGAGAACTTCTaGCAGAGTTGGGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAEQENF*QSWERG
Trigger: CCCTCTTTCCCAACTCTGTCAGAAGTTCTCTTGCTC...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCTTAACAAGTACATTTaGGGAGCTGTCGAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVLNKYI*GAVEAN
Trigger: ATTTGCTTCGACAGCTCCTCAAATGTACTTGTTAAG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTGGAACACAAGGCAATaGGGCAGGCACATTCACACT +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTWNTRQ*GRHIHT
Trigger: AGTGTGAATGTGCCTGCCTCATTGCCTTGTGTTCCA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTAGCTGGTGGGACTCCTaGCACTTGGTGGTAAATTTG +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTSWWDS*HLVVNL
Trigger: CAAATTTACCACCAAGTGGCAGGAGTCCCACCAGCT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATTGGATTCCAACTCTTaGCACTGCACAATGGCTTTT +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLELDSNS*HCTMAF
Trigger: AAAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAA...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTACAAAGCAAGGTCAATaGAAAAGCCAGGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHITKQGQ*KSQGMC
Trigger: ACACATGCCCTGGCTTTTGCATTGACCTTGCTTTGT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTAAATTGTTCAGGCAGTaGTATGCTGGAGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIKLFRQ*YAGAGS
Trigger: TGAGCCAGCTCCAGCATAGCACTGCCTGAACAATTT...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCTTAACCCAGCTGGAATaGGTAACATGGTTACCACAC +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGLTQLE*VTWLPH
Trigger: GTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGAATTTAACATCAACTTaGCCAGACGTTGGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVNLTST*PDVGLN
Trigger: ATTCAGCCCAACGTCTGGCCAAGTTGATGTTAAATT...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCACTCTAAGGTTAAGATaGAGCCAAGACTGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGTLRLR*SQDCKE
Trigger: CTCCTTGCAGTCTTGGCTCCATCTTAACCTTAGAGT...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTATTGACAGTGTCATCTaGGGCAAATCACCTAGCCTC +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFIDSVI*GKSPSL
Trigger: GAGGCTAGGTGATTTGCCCCAGATGACACTGTCAAT...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGATTGGGAAGTCATTTTTaGGAGGGAGAGGAGAACCTT +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRLGSHF*EGEENL
Trigger: AAGGTTCTCCTCTCCCTCCCAAAAATGACTTCCCAA...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCAGGATGAGGGGCAAGTaGATAGGGAAAATGACAAAG +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGRMRGK*IGKMTK
Trigger: CTTTGTCATTTTCCCTATCCACTTGCCCCTCATCCT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCTGGGTGTCCCCTGGTaGGGTAGAGACCTTGGAACC +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCLGVPW*GRDLGT
Trigger: GGTTCCAAGGTCTCTACCCCACCAGGGGACACCCAG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp GTGGACAGTTGCATACCCACACAAGCATCTCCTTTATaGTTCTGTGTTGGGAAGTCATTTTTGGGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VDSCIPTQASPL*FCVGKSFLGGR
Trigger: TCTCCCTCCCAAAAATGACTTCCCAACACAGAACAATAAAGGAGATGCTTGTGTGGGTATGCAACTGTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCATCTTGCTGTAGAATaGCTGAATGGACTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAHLAVE*LNGLVR
Trigger: CCTCACCAGTCCATTCAGTCATTCTACAGCAAGATG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTATTTCAGGAAAAGAATaGGCTACCCCACTCAAATGC +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIISGKE*ATPLKC
Trigger: GCATTTGAGTGGGGTAGCTCATTCTTTTCCTGAAAT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCCTCAAGGGACCCCGATaGAAGTTGTATATATATGGA +
Preference number: 4 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGLKGPR*KLYIYG
Trigger: TCCATATATATACAACTTTCATCGGGGTCCCTTGAG...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAAAAGCAATCGGAGTGTaGGAGAGGCATAATGAATCA +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRKAIGV*ERHNES
Trigger: TGATTCATTATGCCTCTCTCACACTCCGATTGCTTT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTATAAAGAGGGAAATATaGAGAGCTGGCCTTGAGACA +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIIKREI*RAGLET
Trigger: TGTCTCAAGGCCAGCTCTTCATATTTCCCTCTTTAT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGATATGTAGAGCCAAGTaGGCTTACTGGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQICRAK*AYWVPC
Trigger: ACAAGGCACCCAGTAAGCTCACTTGGCTCTACATAT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTTCCACTTATGCAGGTTaGCCAAACCTCTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRISTYAG*PNLFPI
Trigger: AATGGGAAAGAGGTTTGGTCAACCTGCATAAGTGGA...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGTGAGAAAGGACAGTTaGTCTATTGCTCAATGCCAG +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFVRKDS*SIAQCQ
Trigger: CTGGCATTGAGCAATAGAGCAACTGTCCTTTCTCAC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGCTCTTGTGCTTTTCTaGACAGTATGGGTTCAGATC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFALVLF*TVWVQI
Trigger: GATCTGAACCCATACTGTGCAGAAAAGCACAAGAGC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCCAATATACACGCAATTaGCTCTGTCCTTGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGQYTRN*LCPCSP
Trigger: TGGTGAACAAGGACAGAGGCAATTGCGTGTATATTG...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTAGTCAACTAATGTCCTaGTCACAGTTGCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHISQLMS*SQLLKC
Trigger: ACACTTCAGCAACTGTGACCAGGACATTAGTTGACT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGTAGGTGATAATTGGTaGACAGTTGCATACCCACAC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFVGDNW*TVAYPH
Trigger: GTGTGGGTATGCAACTGTCCACCAATTATCACCTAC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTTGCTATGGGAGTGGCTaGTTCCTCAAGAATGGTTTT +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRICYGSG*FLKNGF
Trigger: AAAACCATTCTTGAGGAACCAGCCACTCCCATAGCA...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp ATATTGGAAAGAATTTTTGGGGTGTGGGAGGAATTCTaGACACCACCATTTAGCCCTGTCTCCCTTGGATCT +
Preference number: 4 (lower is better)
Translates to: ILERIFGVWEEF*TPPFSPVSLGS
Trigger: AGATCCAAGGGAGACAGGGCTAAATGGTGGTGTCAAGAATTCCTCCCACACCCCAAAAATTCTTTCCAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp TGGTGGTCACACGAATCACCTGGGAATCTTTGTAAGTaGGACTTATCCCAGGACATTATGAATCAAAGGTCC +
Preference number: 4 (lower is better)
Translates to: WWSHESPGNLCK*DLSQDIMNQRS
Trigger: GGACCTTTGATTCATAATGTCCTGGGATAAGTCCAACTTACAAAGATTCCCAGGTGATTCGTGTGACCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTCACATCTGGAAGAAGTaGCCGGAAGTTATTGCTAAT +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFHIWKK*PEVIAN
Trigger: ATTAGCAATAACTTCCGGTCACTTCTTCCAGATGTG...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCAAGTTGTTACGGTCCTaGATAGTCAAGAGATTGTTG +
Preference number: 4 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGKLLRS*IVKRLL
Trigger: CAACAATCTCTTGACTATTCAGGACCGTAACAACTT...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTGCTCAGCCGTTTAGGTaGCAAATGTTTGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFAQPFR*QMFVFP
Trigger: TGGAAAAACAAACATTTGTCACCTAAACGGCTGAGC...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAAAGAGCCAATGGTCCTaGGCTGATTACTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKKSQWS*ADYCPV
Trigger: AACTGGGCAGTAATCAGCTCAGGACCATTGGCTCTT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAATGTGGGAGGAATTCTTaGCACCACCATTTAGCCCTG +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKCGRNS*HHHLAL
Trigger: CAGGGCTAAATGGTGGTGTCAAGAATTCCTCCCACA...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTAGGGTAACCTTAAACTaGAGTCAGTTACTCTGCAAC +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFRVTLN*SQLLCN
Trigger: GTTGCAGAGTAACTGACTTCAGTTTAAGGTTACCCT...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAACAGCATAGTCCCAAATaGAACATTCCCTTTATCAAT +
Preference number: 4 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEQHSPK*NIPFIN
Trigger: ATTGATAAAGGGAATGTTGCATTTGGGACTATGCTG...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTCTATCTGAGCAGAGCTaGAGAAACTATAGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFLSEQS*RNYSSS
Trigger: ACTAGAGCTATAGTTTCTGCAGCTCTGCTCAGATAG...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTTGTGATCATGAAAGATaGACTGCCTTATATCCCACT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHICDHER*TALYPT
Trigger: AGTGGGATATAAGGCAGTGCATCTTTCATGATCACA...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCAGAGGGAATATCCAGTaGTACAATGTTCTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGRGNIQ*YNVLKE
Trigger: CTCTTTGAGAACATTGTAGCACTGGATATTCCCTCT...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGATCCAACTCTTGCCACTaGACAATGGCTTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRSNSCH*TMAFSF
Trigger: AAAAGAAAAAGCCATTGTGCAGTGGCAAGAGTTGGA...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCCTAACTTATTTTATGTaGTCTGCAGATCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: GHIGIKTPESESGPSNIGLTYFM*SADPRP
Trigger: TGGTCTGGGATCTGCAGAGCACATAAAATAAGTTAG...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTTACTTGTGCTCAGGCTaGATGCAATGTATTGGGAAT +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIYLCSG*MQCIGN
Trigger: ATTCCCAATACATTGCATGCAGCCTGAGCACAAGTA...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTCATGGGTTGGGATTATaGGAGACACTAAATTTAGGC +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFHGLGL*ETLNLG
Trigger: GCCTAAATTTAGTGTCTCCCATAATCCCAACCCATG...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCTCAAAGAGAGCAAATaGTTCTGGATTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCALKESK*FWIGGG
Trigger: ACCACCACCAATCCAGAACCATTTGCTCTCTTTGAG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAACTTGGCCAGACGTTaGGCTGAATTGGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCANLARR*AELEEQ
Trigger: TTGTTCTTCCAATTCAGCCCAACGTCTGGCCAAGTT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAAGGTCACAGACAGATaGCACAGTAGTCATAGTCAG +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAKVTDR*HSSHSQ
Trigger: CTGACTATGACTACTGTGCCATCTGTCTGTGACCTT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAACGTTCTCCCATTCCTTaGCTTCCCCACCAAATTAGG +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKRSPIP*LPHQIR
Trigger: CCTAATTTGGTGGGGAAGCCAAGGAATGGGAGAACG...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAACTGGTTTCCAAATGGTaGTCACACGAATCACCTGGG +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKLVSKW*SHESPG
Trigger: CCCAGGTGATTCGTGTGACCACCATTTGGAAACCAG...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTTGGAAATGCTTCCCTTaGTGGAGGGGACATTTAAAA +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFWKCFP*WRGHLK
Trigger: TTTTAAATGTCCCCTCCACCAAGGGAAGCATTTCCA...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTTACTGGGTGTCCCCTaGTGGGGTAGAGACCTTGGA +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCLLGVP*WGRDLG
Trigger: TCCAAGGTCTCTACCCCACCAGGGGACACCCAGTAA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTGATATTCCTACCAAGTaGTATTTCTTCACCGTTGGA +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIDIPTK*YFFTVG
Trigger: TCCAACGGTGAAGAAATACCACTTGGTAGGAATATC...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTCTGCATGCAATGTATTaGGAATACAGACATCTGAAC +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHILHAMY*EYRHLN
Trigger: GTTCAGATGTCTGTATTCCCAATACATTGCATGCAG...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTTGCTATGGACTTAGGTaGTTGTCCCATGTGAGTAAA +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRICYGLR*LSHVSK
Trigger: TTTACTCACATGGGACAACCACCTAAGTCCATAGCA...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp AGAAGCTGCTATTCTTCAAAAGTGAAGGGTGATCTATaGGGATCATCTCCAGGAAGTCCTCCTTATAAGCAG +
Preference number: 4 (lower is better)
Translates to: RSCYSSKVKGDL*GSSPGSPPYKQ
Trigger: CTGCTTATAAGGAGGACTTCCTGGAGATGATCCCAATAGATCACCCTTCACTTTTGAAGAATAGCAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp CCTTATCCTACAAAGTTTGCCCAGTCAGCAATGAAGTaGCCCAGAGATATTCCTACCAAGTGGTATTTCTTC +
Preference number: 4 (lower is better)
Translates to: PYPTKFAQSAMK*PRDIPTKWYFF
Trigger: GAAGAAATACCACTTGGTAGGAATATCTCTGGGCAACTTCATTGCTGACTGGGCAAACTTTGTAGGATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCTCTTCACATATTGCTaGTGCAAGGGTGTACATAAG +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTLFTYC*CKGVHK
Trigger: CTTATGTACACCCTTGCATCAGCAATATGTGAAGAG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGGGATGGGAATGATTTaGTTTCTACTCATATGGCTG +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTGMGMI*FLLIWL
Trigger: CAGCCATATGAGTAGAAATCAAATCATTCCCATCCC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGATGCAAGCAATCTAGATaGGATTTCAGGAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRCKQSR*DFRKRM
Trigger: CATTCTTTTCCTGAAATCTCATCTAGATTGCTTGCA...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGAACACGGTGTGGTTGTaGTACCCATCAAATTATACC +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQNTVWL*YPSNYT
Trigger: GGTATAATTTGATGGGTATCACAACCACACCGTGTT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTATGCTTAGTACCAACTaGTCTGTGGCCTCGATTAAT +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAMLSTN*SVASIN
Trigger: ATTAATCGAGGCCACAGATCAGTTGGTACTAAGCAT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTGAGAATAGGCTTCACTaGGGAACATCTATTCATACA +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFENRLH*GTSIHT
Trigger: TGTATGAATAGATGTTCCTCAGTGAAGCCTATTCTC...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTATCAAAGGTCCAGAATaGGTGGCAAGAATTGTATTT +
Preference number: 4 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIIKGPE*VARIVF
Trigger: AAATACAATTCTTGCCACTCATTCTGGACCTTTGAT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAAAACAGCTGAATTGTTaGATCACTAAGACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRKQLNC*ITKTVS
Trigger: AGACACAGTCTTAGTGATTCAACAATTCAGCTGTTT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGCCACAAGTAATAACTaGTCACCCTTGTTATACTGG +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTATSNN*SPLLYW
Trigger: CCAGTATAACAAGGGTGATCAGTTATTACTTGTGGC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGTCACGTGGAATATTTaGACACCTTGGGATCCAATA +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTVTWNI*TPWDPI
Trigger: TATTGGATCCCAAGGTGTTCAAATATTCCACGTGAC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAAGATCTGTAAAGTTTTaGTATGGACTTAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRRSVKF*YGLRWL
Trigger: CAACCACCTAAGTCCATAGCAAAACTTTACAGATCT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTTCTCTTGGAGTTCCTaGGTGAGAGAATTCGTAATG +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQFSWSS*VREFVM
Trigger: CATTACGAATTCTCTCACCCAGGAACTCCAAGAGAA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATGCATAATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCTTCCAACATCTCTTTaGAAAGCCTCCGTAGGGGCG +
Preference number: 4 (lower is better)
Translates to: MHNPSVEEVFLNDDACFSLPTSL*KASVGA
Trigger: CGCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAG...AGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGATTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGACAGTTGCTGAAGTGTaGAAGAAAAATGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQTVAEV*KKNAGI
Trigger: GATCCCTGCATTTTTCTTCCACACTTCAGCAACTGT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTATGGCCTTACAGATGTaGCCACAGTGCTATTATTTG +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTMALQM*PQCYYL
Trigger: CAAATAATAGCACTGTGGCCACATCTGTAAGGCCAT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCTTTATTGTTCTGTGTTaGGAAGTCATTTTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGFIVLC*EVIFGR
Trigger: CCTCCCAAAAATGACTTCCCAACACAGAACAATAAA...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCTTTTCTGCACAGTATaGGTTCAGATCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCALFCTV*VQIWIL
Trigger: CAAGATCCAGATCTGAACCCATACTGTGCAGAAAAG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTTGTCTCATCTCCACATaGAGGATGTTGATCTGGAAT +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCACLIST*RMLIWN
Trigger: ATTCCAGATCAACATCCTCCATGTGGAGATGAGACA...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp GCTAAAAATCTGGGTTCCACTGTTTTCCAGAGCCAGTaGTTAAACATTTGGCAGCACACCAAAGAGCTAAAA +
Preference number: 4 (lower is better)
Translates to: AKNLGSTVFQSQ*LNIWQHTKELK
Trigger: TTTTAGCTCTTTGGTGTGCTGCCAAATGTTTAACAACTGGCTCTGGAAAACAGTGGAACCCAGATTTTTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAGAATTTCTTGCCTTTaGTGTAAAAACGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCARISCL*CKNAVR
Trigger: TCGGACAGCGTTTTTACATCAAAGGCAAGAAATTCT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp AATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACCCTGGTCACAGTTGCTaGAGTGTGGAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: NPSVEEVFLNDDACFSPNPGHSC*SVEEKC
Trigger: GCATTTTTCTTCCACACTTCAGCAACTGTGACCAGG...GTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTAGCCAGGGATGGGAATaGTTTGATTTCTACTCATAT +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCASQGWE*FDFYSY
Trigger: ATATGAGTAGAAATCAAATCATTCCCATCCCTGGCT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTGTCCCTGCTTCCTTTaGTCTCAGGTCAATACCGCT +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCCPCFL*SQVNTA
Trigger: AGCGGTATTGACCTGAGATCAAAGGAAGCAGGGACA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGTTGATCTGGAATCCTaGCTTGAGATAACATCTAGA +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTVDLES*LEITSR
Trigger: TCTAGATGTTATCTCAAGTCAGGATTCCAGATCAAC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTACCTGTTGACATGTTaGATTATATTTCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQYLLTC*IIFPGQ
Trigger: TTGGCCGGGAAATATAATGCAACATGTCAACAGGTA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGGAGTCCATCGTGATTTaGCTATTTTGTCATGAAGCA +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQESIVI*LFCHEA
Trigger: TGCTTCATGACAAAATAGGCAAATCACGATGGACTC...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAACCTTGGAACCTCAGTaGCTTTCCAGATATGTAGAG +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKTLEPQ*LSRYVE
Trigger: CTCTACATATCTGGAAAGGCACTGAGGTTCCAAGGT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTACTCTTAAAGAGCTTTaGTCCTCCTTCTATACTGAT +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRITLKEL*SSFYTD
Trigger: ATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAGT...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTGTCATAGTAATGGTATaGAAGATCTTCCCTTGTGTT +
Preference number: 4 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFVIVMV*KIFPCV
Trigger: AACACAAGGGAAGATCTTCCATACCATTACTATGAC...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGACACTAAATTTAGGCTaGAATGGCCTTACAGATGTG +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQTLNLG*NGLTDV
Trigger: CACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGAGAGCAAATGGTTCTaGATTGGTGGTGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCESKWF*IGGGAH
Trigger: GTGTGCACCACCACCAATCCAGAACCATTTGCTCTC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGAACAGAGATTTTGCATaGTCAGCTAGAAGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQNRDFA*SARSCY
Trigger: ATAGCAGCTTCTAGCTGACCATGCAAAATCTCTGTT...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTCACCCTTGTTATACTaGGTTAGTCTTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTSPLLY*VSLRTG
Trigger: TCCAGTTCTAAGACTAACCCAGTATAACAAGGGTGA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTGGAGCCAACTTATACTaGCTCTTGAAAACATATTGT +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFGANLY*LLKTYC
Trigger: ACAATATGTTTTCAAGAGCCAGTATAAGTTGGCTCC...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTACAAAGCTTGTTCTGTaGATTACCAGATTACCTGAT +
Preference number: 4 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFTKLVL*ITRLPD
Trigger: ATCAGGTAATCTGGTAATCCACAGAACAAGCTTTGT...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATCAAGGGAGTCCATCGTaGTTTGCCTATTTTGTCATG +
Preference number: 4 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHQGSPS*FAYFVM
Trigger: CATGACAAAATAGGCAAATCACGATGGACTCCCTTG...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTTTAGCTATAACCAAATaGACTAAGTGCTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCALAITK*TKCSGT
Trigger: TGTTCCTGAGCACTTAGTTCATTTGGTTATAGCTAA...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCAAATTGAATCTGAATaGATCACTTCAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTQIESE*ITSVPC
Trigger: ACAGGGAACTGAAGTGATTCATTCAGATTCAATTTG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGATTACCAGATTACCTaGTTTCTAAACACTCAGTTG +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTDYQIT*FLNTQL
Trigger: CAACTGAGTGTTTAGAAATCAGGTAATCTGGTAATC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATGTCACTCCAACTTTCTaGACCTCAGTTGTCTCATCT +
Preference number: 4 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHVTPTF*TSVVSS
Trigger: AGATGAGACAACTGAGGTTCAGAAAGTTGGAGTGAC...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGCTGAAATGCAATGGTaGAATCAAAGTATGTTAAGC +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTAEMQW*NQSMLS
Trigger: GCTTAACATACTTTGATTTCACCATTGCATTTCAGC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTAGAAAATGTCCAACTTaGGTTTCAAGCATTTACAGT +
Preference number: 4 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIRKCPT*VSSIYS
Trigger: ACTGTAAATGCTTGAAACGCAAGTTGGACATTTTCT...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTAAATTAGGTTTCTCTTaGCACTCACATTCACGGATA +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTKLGFS*HSHSRI
Trigger: TATCCGTGAATGTGAGTGCCAAGAGAAACCTAATTT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGTACCAACTGATCTGTaGCCTCGATTAATTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCVPTDL*PRLIGP
Trigger: TGGCCCAATTAATCGAGGCCACAGATCAGTTGGTAC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGGGATGTATATATTACTaGTTTCCAAATGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQGCIYY*FPNGGH
Trigger: GTGACCACCATTTGGAAACCAGTAATATATACATCC...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAAAATGCTTCCCTTGGTaGAGGGGACATTTAAAAGTC +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKKCFPW*RGHLKV
Trigger: GACTTTTAAATGTCCCCTCCACCAAGGGAAGCATTT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGCTGGATCTTGAAATATaGCTAAAGAGCACTTCTAAC +
Preference number: 4 (lower is better)
Translates to: PSGISSPLETFLRANQLQLDLEI*LKSTSN
Trigger: GTTAGAAGTGCTCTTTAGCCATATTTCAAGATCCAG...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCGTACTTGGGAGTGGTaGAGATGTTCTCCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCRTWEW*RCSPFS
Trigger: TGAAAAAGGAGAACATCTTCACCACTCCCAAGTACG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCACATCAAGTACAAATaGAACATATACAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTHIKYK*NIYKQS
Trigger: GCTTTGCTTGTATATGTTGCATTTGTACTTGATGTG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACTACAGTTGCTGAAGTGTaGAAGAAAAATGCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ILLLRKSSLMMMHVFLLTTVAEV*KKNAGI
Trigger: GATCCCTGCATTTTTCTTCCACACTTCAGCAACTGT...AGTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CCA 90 bp ATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACTAGTCAACTAATGTCCTaGTCACAGTTGCTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: ILLLRKSSLMMMHVFLLTSQLMS*SQLLKC
Trigger: ACACTTCAGCAACTGTGACCAGGACATTAGTTGACT...AGTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CCA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCAAAATCCATACAAGTaGATCTCTTCACATATTGCT +
Preference number: 4 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTQNPYK*ISSHIA
Trigger: AGCAATATGTGAAGAGATCCACTTGTATGGATTTTG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTGACACAGACACAAGGTaGAGAAATGATAGATATTTT +
Preference number: 4 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCADTDTR*RNDRYF
Trigger: AAAATATCTATCATTTCTCCACCTTGTGTCTGTGTC...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCAAAATGCTATGGGAGTaGCTGGTTCCTCAAGAATGG +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCKMLWE*LVPQEW
Trigger: CCATTCTTGAGGAACCAGCCACTCCCATAGCATTTT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp TGGAGCCAACTTATACTGGCTCTTGAAAACATATTGTaGTGTTTTCAGCTGGTTGACATTAAGTTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: WSQLILALENIL*CFQLVDIKLVA
Trigger: GGCTACTAACTTAATGTCAACCAGCTGAAAACACAACAATATGTTTTCAAGAGCCAGTATAAGTTGGCTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp TTTTCTTCACAAACTACAGTCACAATATACACGCAATaGCCTCTGTCCTTGTTCACCAAGAAAGCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: FSSQTTVTIYTQ*PLSLFTKKAED
Trigger: ATCTTCTGCTTTCTTGGTGAACAAGGACAGAGGCAATTGCGTGTATATTGTGACTGTAGTTTGTGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR TCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCGGTGGTTGTCCCATGTaGGTAAATGATAGTGTATTG +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCGGCPM*VNDSVL
Trigger: CAATACACTATCATTTACTCACATGGGACAACCACC...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCATCAAGAGACGCAATaGTATCCACAACATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCHQETQ*YPQHRL
Trigger: AAGCCTATGTTGTGGATAGCATTGCGTCTCTTGATG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTCAACTCCAGTTGAGTaGAACTTAAACTCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCSTPVE*NLNSQR
Trigger: ACGCTGAGAGTTTAAGTTGCACTCAACTGGAGTTGA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp AATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACAACCTGTTGACATGTTaGATTATATTTCCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: NPSVEEVFLNDDACFSPNNLLTC*IIFPGQ
Trigger: TTGGCCGGGAAATATAATGCAACATGTCAACAGGTT...GTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCAGAATTTTTGGGGTGTaGGAGGAATTCTTGACACCA +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCRIFGV*EEFLTP
Trigger: TGGTGTCAAGAATTCCTCCCACACCCCAAAAATTCT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAAATACCTTTGTGTTTTaGAGACTACCTGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKNTFVF*RLPEVD
Trigger: ATCAACCTCAGGTAGTCTCCAAAACACAAAGGTATT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCAGACTAAAAATGCTATaGGAGTGGCTGGTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCRLKML*EWLVPQ
Trigger: TTGAGGAACCAGCCACTCCCATAGCATTTTTAGTCT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCATTGGAAGAACAAAGTaGTGCTCAGTAAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCIGRTK*CSVKSQ
Trigger: CTGGCTTTTTACTGAGCAGCACTTTGTTCTTCCAAT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAACAAATATGCTTGACTaGCATTTGGAAAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKTNMLD*HLERRK
Trigger: CTTTCTTCTTTCCAAATGCCAGTCAAGCATATTTGT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCATTATCCAACAGAGGTaGTACAAGGCCACAAGTAAT +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCIIQQR*YKATSN
Trigger: ATTACTTGTGGCCTTGTACCACCTCTGTTGGATAAT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CCA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAGATTTTTGTTTTTCATaGTCCAGCCTTACATCACAT +
Preference number: 4 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKDFCFS*SSLTSH
Trigger: ATGTGATGTAAGGCTGGACCATGAAAAACAAAAATC...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATCTTAAGCTGATTCATTaGCTCTATATTCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHLKLIH*LYILRE
Trigger: TTCTCTCAGAATATAGAGGCAATGAATCAGCTTAAG...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR GCA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTTATTTTATGTGCTCTaGAGATCCCAGACCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCLFYVL*RSQTKN
Trigger: GTTTTTGGTCTGGGATCTGCAGAGCACATAAAATAA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp TTACTAAAACAAGGTTTTACTAAGATGAATAGCTTATaGGGTAAGATTGCAGCTGTCAAGCATGAACCACCA +
Preference number: 4 (lower is better)
Translates to: LLKQGFTKMNSL*GKIAAVKHEPP
Trigger: TGGTGGTTCATGCTTGACAGCTGCAATCTTACCCAATAAGCTATTCATCTTAGTAAAACCTTGTTTTAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
3UTR CAA 72 bp AATGATAGTGTATTGCGATGTTTCCATACATTTGTTTaGTGTCCTGGGAGAATTTCAGTGCTAACTAATGAT +
Preference number: 4 (lower is better)
Translates to: NDSVLRCFHTFV*CPGRISVLTND
Trigger: ATCATTAGTTAGCACTGAAATTCTCCCAGGACACAAAACAAATGTATGGAAACATCGCAATACACTATCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 90 bp ACTGGCGACCCGGGCCATTTTGCAGTTTCTCATCCCGGGCTGGGCTaGGTTCAGGGAAACCGGGGAAATCGGTCCATTGAGCGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TGDPGHFAVSHPGLG*VQGNRGNRSIERPA
Trigger: TGCTGGCCGCTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 90 bp AGCACACTGGCGACCCGGGCCATTTTGCAGTTTCTCATCCCGGGCTaGGCTGGGTTCAGGGAAACCGGGGAAATCGGTCCATTGAGCGGC +
Preference number: 5 (lower is better)
Translates to: STLATRAILQFLIPG*AGFRETGEIGPLSG
Trigger: GCCGCTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCGCCAGTGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 90 bp TCCCGGGCTGGGCTGGGTTCAGGGAAACCGGGGAAATCGGTCCATTaGGCGGCCAGCAGCTCGCTGGCGTGTATATATGTGTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SRAGLGSGKPGKSVH*AASSSLACIYVCVC
Trigger: ACACACACACACATATATACACGCCAGCGAGCTGCTGGCCGCTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 90 bp AGAGTCAGCTTGGTGAGCCCTTCCCCATGCATTCGGTACAGCAGCTaGAACTCAGCAGGCAGCTGGTGGGACTCCTGCCACTTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: RVSLVSPSPCIRYSS*NSAGSWWDSCHLVV
Trigger: TACCACCAAGTGGCAGGAGTCCCACCAGCTGCCTGCTGAGTTTCAGCTGCTGTACCGAATGCATGGGGAAGGGCTCACCAAGCTGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCTTCCTTTGCACATCCTaGCTGGTAGCCCCATGGCCA +
Preference number: 5 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTFLCTS*LVAPWP
Trigger: TGGCCATGGGGCTACCAGCAAGGATGTGCAAAGGAA...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAAGCGACCCGGGCCATTTaGCAGTTTCTCATCCCGGGC +
Preference number: 5 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEATRAI*QFLIPG
Trigger: GCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCGC...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 90 bp TTTCCGTTTGGAGTTCTTAGGCACAGTGTGACAGAGTCAGCTTGGTaGGCCCTTCCCCATGCATTCGGTACAGCAGCTGAAACTCAGCAG +
Preference number: 5 (lower is better)
Translates to: FPFGVLRHSVTESAW*ALPHAFGTAAETQQ
Trigger: CTGCTGAGTTTCAGCTGCTGTACCGAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTGTGCCTAAGAACTCCAAACGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 90 bp AAACAGCCATTTGGCGCTTTCCGTTTGGAGTTCTTAGGCACAGTGTaGCAGAGTCAGCTTGGTGAGCCCTTCCCCATGCATTCGGTACAG +
Preference number: 5 (lower is better)
Translates to: KQPFGAFRLEFLGTV*QSQLGEPFPMHSVQ
Trigger: CTGTACCGAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTGTGCCTAAGAACTCCAAACGGAAAGCGCCAAATGGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGCAAATGCATCAAGTGTaGAGTGACGGGGTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVQMHQV*SDGVSG
Trigger: CCCGCTCACCCCGTCACTCAACACTTGATGCATTTG...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGGGGGAAATCGGTCCATaGAGCGGCCAGCAGCTCGCT +
Preference number: 5 (lower is better)
Translates to: PSGISSPLETFLRANQLQGEIGP*SGQQLA
Trigger: AGCGAGCTGCTGGCCGCTCAATGGACCGATTTCCCC...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTCCCGGGCTGGCGTACTaGGGAGTGGTGAAGATGTTC +
Preference number: 5 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFPGLAY*GVVKMF
Trigger: GAACATCTTCACCACTCCCAAGTACGCCAGCCCGGG...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGGTGAAGGGTGATCTATaGGGATCATCTCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQVKGDL*GSSPGS
Trigger: ACTTCCTGGAGATGATCCCAATAGATCACCCTTCAC...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCGCTTATTGGGTAAGATaGCAGCTGTCAAGCATGAAC +
Preference number: 5 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTAYWVR*QLSSMN
Trigger: GTTCATGCTTGACAGCTGCAATCTTACCCAATAAGC...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGTGTGGACTTCTCTGTTaGGTGTCAGGAAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQCGLLC*VSGKEP
Trigger: TGGCTCTTTTCCTGACACCAAACAGAGAAGTCCACA...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGTCCAGGATGCTGGGGTaGAAGGTGGTAAGATTGGTT +
Preference number: 5 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVSRMLG*KVVRLV
Trigger: AACCAATCTTACCACCTTCAACCCCAGCATCCTGGA...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTTGTGACAGAGTCAGCTaGGTGAGCCCTTCCCCATGC +
Preference number: 5 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFCDRVS*VSPSPC
Trigger: GCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACA...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGGTTGGGAAGTCATTTTaGGGAGGGAGAGGAGAACCT +
Preference number: 5 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVVGKSF*GGRGEP
Trigger: AGGTTCTCCTCTCCCTCCCAAAAATGACTTCCCAAC...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAAGGAGGTCAGTCTGATTaGTTAAGGCCCTCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLEGGQSD*LRPSAS
Trigger: AGAAGCCGAGGGCCTTAACAAATCAGACTGACCTCC...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTTCACATTCTGGCAGCTaGTTTCCAAGGGCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHISHSGS*FPRAGE
Trigger: CTCGCCTGCCCTTGGAAACAAGCTGCCAGAATGTGA...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCAGCTTGCTCTCCACCTaGTCTTTGGGCTTGCATCCA +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGSLLST*SLGLHP
Trigger: TGGATGCAAGCCCAAAGACAAGGTGGAGAGCAAGCT...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTTGGGACTCCTGCCACTaGGTGGTAAATTTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIWDSCH*VVNLVP
Trigger: AGGAACCAAATTTACCACCAAGTGGCAGGAGTCCCA...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ACTGGGTGCCTTGTTCTTCCCCTGCTCCTTTGCAGGCACTGTTTTGTGGGTACCGCTATTCAATTTGATTaGGGGCACTTTTTAAACAGC +
Preference number: 5 (lower is better)
Translates to: TGCLVLPLLLCRHCFVGTAIQFD*GHFLNS
Trigger: GCTGTTTAAAAAGTGCCCCAAATCAAATTGAATAGC...GGTACCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGAACAAGGCACCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCGCAAATGGTTCTGGATaGGTGGTGGTGCACACAATG +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGANGSG*VVVHTM
Trigger: CATTGTGTGCACCACCACCAATCCAGAACCATTTGC...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCCCAGTTCACTGCACTaGACTACACAAGCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAPSSLH*TTQAWE
Trigger: CTCCCAGGCTTGTGTAGTCAAGTGCAGTGAACTGGG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCGTGTGGGAGGAATTCTaGACACCACCATTTAGCCCT +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGVWEEF*TPPFSP
Trigger: AGGGCTAAATGGTGGTGTCAAGAATTCCTCCCACAC...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCCTTAGAAGGTTTCTCTaGGAGTTCCTGGGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGLRRFL*EFLGER
Trigger: TCTCTCACCCAGGAACTCCAAGAGAAACCTTCTAAG...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CCAGGGCTCTTGGCTGTAAGCGCTCTTGTGCTTTTCTGCACAGTATGGGTTCAGTTGAAGGTGGTAAGATaGGTTTTTCTTCCAACATCT +
Preference number: 5 (lower is better)
Translates to: PGLLAVSALVLFCTVWVQLKVVR*VFLPTS
Trigger: AGATGTTGGAAGAAAAACCAATCTTACCACCTTCAA...CTGAACCCATACTGTGCAGAAAAGCACAAGAGCGCTTACAGCCAAGAGCCCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TGCCAGCCACAAACACACAGCCCCTTTGTAAGCAAAGTGACAGTTCTACACATTAGACGTTGGGCTGAATaGGAAGAACAAAGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: CQPQTHSPFVSKVTVLHIRRWAE*EEQSAA
Trigger: AGCAGCACTTTGTTCTTCCAATTCAGCCCAACGTCT...AATGTGTAGAACTGTCACTTTGCTTACAAAGGGGCTGTGTGTTTGTGGCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAGGTGAGAAAGGACAGTaGCTCTATTGCTCAATGCCA +
Preference number: 5 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRGEKGQ*LYCSMP
Trigger: TGGCATTGAGCAATAGAGCAACTGTCCTTTCTCACC...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTAGGGTGAAGGCATACTaGTGCTCAGGCTGCATGCAA +
Preference number: 5 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTRVKAY*CSGCMQ
Trigger: TTGCATGCAGCCTGAGCACAAGTATGCCTTCACCCT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 90 bp GCTGTCCGATTAAATTTCCACTTAGAAGGTTTCTCTTGGAGTTCCTaGGTGAGAGAATTCGTAATGGGCACGAATGACGGGTCTAGAAAC +
Preference number: 5 (lower is better)
Translates to: AVRLNFHLEGFSWSS*VREFVMGTNDGSRN
Trigger: GTTTCTAGACCCGTCATTCGTGCCCATTACGAATTCTCTCACCCAGGAACTCCAAGAGAAACCTTCTAAGTGGAAATTTAATCGGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAATGTCCTGGTCACAGTaGCTGAAGTGTGGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRMSWSQ*LKCGRK
Trigger: TTTTCTTCCACACTTCAGCAACTGTGACCAGGACAT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTTTGGCGCTTTCCGTTaGGAGTTCTTAGGCACAGTG +
Preference number: 5 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTFGAFR*EFLGTV
Trigger: CACTGTGCCTAAGAACTCCAAACGGAAAGCGCCAAA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGAGGGATGGGAATGATTaGATTTCTACTCATATGGCT +
Preference number: 5 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVRDGND*ISTHMA
Trigger: AGCCATATGAGTAGAAATCAAATCATTCCCATCCCT...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAGCAGCGGTTCTTCCTTaGCACATCCTTGCTGGTAGC +
Preference number: 5 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKAAVLP*HILAGS
Trigger: GCTACCAGCAAGGATGTGCAAAGGAAGAACCGCTGC...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GATGGTAGTACAGTCCTCTTCAAAGGGACAGGGAACAAACACGGTGTGGTTGTGAAGATGAATAGCTTATaGGGTAAGATTGCAGCTGTC +
Preference number: 5 (lower is better)
Translates to: DGSTVLFKGTGNKHGVVVKMNSL*GKIAAV
Trigger: GACAGCTGCAATCTTACCCAATAAGCTATTCATCTT...CACAACCACACCGTGTTTGTTCCCTGTCCCTTTGAAGAGGACTGTACTACCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTTTCATACAGCTGTGTTaGCTGGGAGATCAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFFIQLC*LGDQLH
Trigger: ATGCAGCTGATCTCCCAGCAAACACAGCTGTATGAA...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAATCTTCCCCTGCTCCTTaGCAGGCACTGTTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKSSPAP*QALFCG
Trigger: CCCACAAAACAGTGCCTGCAAAGGAGCAGGGGAAGA...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTCAGTCAGCAATGAAGTaGCCCAGAGATATTCCTACC +
Preference number: 5 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIQSAMK*PRDIPT
Trigger: GGTAGGAATATCTCTGGGCAACTTCATTGCTGACTG...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCAGTGCTGGCTTCTCTaGGGTCTCTGTGGCCCTCAC +
Preference number: 5 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCQCWLL*GLCGPH
Trigger: GTGAGGGCCACAGAGACCCAAGAGAAGCCAGCACTG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAACAATATACACGCAATaGCCTCTGTCCTTGTTCACC +
Preference number: 5 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRTIYTQ*PLSLFT
Trigger: GGTGAACAAGGACAGAGGCAATTGCGTGTATATTGT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCCATTCAGTACTGTGTTaGGAACACAAGGCAATGAGG +
Preference number: 5 (lower is better)
Translates to: GHIGIKTPESESGPSNIGHSVLC*EHKAMR
Trigger: CCTCATTGCCTTGTGTTCCAAACACAGTACTGAATG...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 90 bp TCCAAACGGCCAAAATCCATACAAGTGGATCTCTTCACATATTGCTaGTGCAAGGGTGTACATAAGAATACCTGTGCTCAGCCGTTTAGG +
Preference number: 5 (lower is better)
Translates to: SKRPKSIQVDLFTYC*CKGVHKNTCAQPFR
Trigger: CCTAAACGGCTGAGCACAGGTATTCTTATGTACACCCTTGCATCAGCAATATGTGAAGAGATCCACTTGTATGGATTTTGGCCGTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTGTACCTGTTGACATGTaGCATTATATTTCCCGGCCA +
Preference number: 5 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIVPVDM*HYISRP
Trigger: TGGCCGGGAAATATAATGCAACATGTCAACAGGTAC...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTATGGAAGATCTTCCCTaGTGTTGGGGTCAAATCCAA +
Preference number: 5 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIMEDLP*CWGQIQ
Trigger: TTGGATTTGACCCCAACACAAGGGAAGATCTTCCAT...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCTTTTTAAACAGCCATTaGGCGCTTTCCGTTTGGAGT +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGFLNSH*ALSVWS
Trigger: ACTCCAAACGGAAAGCGCCAAATGGCTGTTTAAAAA...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCTTGGATTCCAACTCTaGCCACTGCACAATGGCTTT +
Preference number: 5 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCALGFQL*PLHNGF
Trigger: AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTCAGGTCTACATAATCTaGGATTCCAACTCTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIQVYII*DSNSCH
Trigger: GTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTG...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCCAAATTAGGTTTCTCTaGGCACTCACATTCACGGAT +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGQIRFL*ALTFTD
Trigger: ATCCGTGAATGTGAGTGCCAAGAGAAACCTAATTTG...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAGCTCAGTTTGTCATTTaGCACATGAAGACTCACGAA +
Preference number: 5 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRAQFVI*HMKTHE
Trigger: TTCGTGAGTCTTCATGTGCAAAATGACAAACTGAGC...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCAGTCACGTGGAATATTaGAACACCTTGGGATCCAAT +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGSHVEY*NTLGSN
Trigger: ATTGGATCCCAAGGTGTTCAAATATTCCACGTGACT...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ACCCAGCCTAGTGCATGGGTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATTAGAAAAGCCACAGTaGGTAATCTCCCAAGATACT +
Preference number: 5 (lower is better)
Translates to: TQPSAWVGIMGDTKFRLELEKPQ*VISQDT
Trigger: AGTATCTTGGGAGATTACCAACTGTGGCTTTTCTAA...TTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAACCCATGCACTAGGCTGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTTTCCACTTATGCAGGTaGACCAAACCTCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFFHLCR*TKPLSH
Trigger: ATGGGAAAGAGGTTTGGTCAACCTGCATAAGTGGAA...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAATCATAGTGCATCAGTaGTCCAATCCGAACACTATT +
Preference number: 5 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRIIVHQ*SNPNTI
Trigger: AATAGTGTTCGGATTGGACAACTGATGCACTATGAT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAAGATCTTCCCTTGTGTaGGGGTCAAATCCAAACGGC +
Preference number: 5 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKRSSLV*GSNPNG
Trigger: GCCGTTTGGATTTGACCCCAACACAAGGGAAGATCT...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCAAACAAACAGAGATTTaGCATGGTCAGCTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: GHIGIKTPESESGPSNIGKQTEI*HGQLEA
Trigger: AGCTTCTAGCTGACCATGCAAAATCTCTGTTTGTTT...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTATAATTGGTGGACAGTaGCATACCCACACAAGCATC +
Preference number: 5 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAIIGGQ*HTHTSI
Trigger: GATGCTTGTGTGGGTATGCAACTGTCCACCAATTAT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTAGTCATAGTCAGCACTGCCAGGCACACAACACTACTAAACATACAGCACTTTGGCTTAAACAGAAACTaGTGCCTAGTGCATTCAAAC +
Preference number: 5 (lower is better)
Translates to: VVIVSTARHTTLLNIQHFGLNRN*CLVHSN
Trigger: GTTTGAATGCACTAGGCACAAGTTTCTGTTTAAGCC...AAAGTGCTGTATGTTTAGTAGTGTTGTGTGCCTGGCAGTGCTGACTATGACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTATGGAAATGCTTCCCTaGGTGGAGGGGACATTTAAA +
Preference number: 5 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCAMEMLP*VEGTFK
Trigger: TTTAAATGTCCCCTCCACCAAGGGAAGCATTTCCAT...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTGGGAAAATGACAAAGTaGGGGAAACAAGTGATGAAC +
Preference number: 5 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIGKMTK*GKQVMN
Trigger: GTTCATCACTTGTTTCCCCAACTTTGTCATTTTCCC...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TTAACCCAGCTGGAATGGGTAACATGGTTACCACACTTTAGGGTACACAGGATTGCTGCATGCAATGTATaGGGAATACAGACATCTGAA +
Preference number: 5 (lower is better)
Translates to: LTQLEWVTWLPHFRVHRIAACNV*GIQTSE
Trigger: TTCAGATGTCTGTATTCCCAATACATTGCATGCAGC...AATCCTGTGTACCCTAAAGTGTGGTAACCATGTTACCCATTCCAGCTGGGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 90 bp TCCCTTGTGTTGGGGTCAAATCCAAACGGCCAAAATCCATACAAGTaGATCTCTTCACATATTGCTGATGCAAGGGTGTACATAAGAATA +
Preference number: 5 (lower is better)
Translates to: SLVLGSNPNGQNPYK*ISSHIADARVYIRI
Trigger: TATTCTTATGTACACCCTTGCATCAGCAATATGTGAAGAGATCCACTTGTATGGATTTTGGCCGTTTGGATTTGACCCCAACACAAGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCTCTTCCAACATCTCTTaGGAAAGCCTCCGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCSSNIS*ESLRRG
Trigger: GCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAGA...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ATGCATAATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTTCTTCCAACATCTCTTaGGAAAGCCTCCGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: MHNPSVEEVFLNDDACFSSSNIS*ESLRRG
Trigger: GCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAGA...AGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGATTATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CAA 90 bp ATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACTTCCAGGATGCTGGGGTaGAAGGTGGTAAGATTGGTT +
Preference number: 5 (lower is better)
Translates to: ILLLRKSSLMMMHVFLLTSRMLG*KVVRLV
Trigger: AACCAATCTTACCACCTTCAACCCCAGCATCCTGGA...AGTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCTTAGGTGACAAATGTTaGTTTTTCCAGTACCTGTTG +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGLGDKC*FFQYLL
Trigger: CAACAGGTACTGGAAAAACAAACATTTGTCACCTAA...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTAAATTTAACATCAACTaGGCCAGACGTTGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTKFNIN*ARRWAE
Trigger: TTCAGCCCAACGTCTGGCCAAGTTGATGTTAAATTT...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTCAAGCATCTCCTTTATaGTTCTGTGTTGGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTQASPL*FCVGKS
Trigger: TGACTTCCCAACACAGAACAATAAAGGAGATGCTTG...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTGGGAATCTTTGTAAGTaGGACTTATCCCAGGACATT +
Preference number: 5 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTGNLCK*DLSQDI
Trigger: AATGTCCTGGGATAAGTCCAACTTACAAAGATTCCC...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCAGTTGTCTCATCTCCACATGGAGGATGTTGATCTGGAATCCTGACTTGAGAAATCAAAGGAACCCTTaGGTATCACTGTTGTCTAAA +
Preference number: 5 (lower is better)
Translates to: LSCLISTWRMLIWNPDLRNQRNP*VSLLSK
Trigger: TTTAGACAACAGTGATACCAAAGGGTTCCTTTGATT...TCTCAAGTCAGGATTCCAGATCAACATCCTCCATGTGGAGATGAGACAACTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GTTGGGATTATGGGAGACACTAAATTTAGGCTGGAATGGCCTTACAGATGTGGCGAATATTTGAACACCTaGGGATCCAATAATATGCTC +
Preference number: 5 (lower is better)
Translates to: VGIMGDTKFRLEWPYRCGEYLNT*GSNNML
Trigger: GAGCATATTATTGGATCCCAAGGTGTTCAAATATTC...GCCACATCTGTAAGGCCATTCCAGCCTAAATTTAGTGTCTCCCATAATCCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCAGGACAGTTGCTCTATaGCTCAATGCCAGGGGACTG +
Preference number: 5 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCRTVAL*LNARGL
Trigger: CAGTCCCCTGGCATTGAGCAATAGAGCAACTGTCCT...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GGGCACATTGGGATTAAAACTCCAGAGTCAGAATCTGGCCCAAGTAATATTGGCTGTCGAAGCAAATGGTaGCATTTTCTTCACAAACTA +
Preference number: 5 (lower is better)
Translates to: GHIGIKTPESESGPSNIGCRSKW*HFLHKL
Trigger: TAGTTTGTGAAGAAAATGCAACCATTTGCTTCGACA...GCCAATATTACTTGGGCCAGATTCTGACTCTGGAGTTTTAATCCCAATGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACTTGTTGGATGTCCTGGTCACAGTaGCTGAAGTGTGGAAGAAAA +
Preference number: 5 (lower is better)
Translates to: LLRKSSLMMMHVFLLTCWMSWSQ*LKCGRK
Trigger: TTTTCTTCCACACTTCAGCAACTGTGACCAGGACAT...CCAACAAGTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CAA 90 bp ATCGCAGGTCTACATAATCTTGGATTCCAACTCTTGCCACTGCACAATGGCTTTATTTGCAAACAAAGCTaGTTCTGTGGATTACCAGAT +
Preference number: 5 (lower is better)
Translates to: IAGLHNLGFQLLPLHNGFICKQS*FCGLPD
Trigger: ATCTGGTAATCCACAGAACAAGCTTTGTTTGCAAAT...AAAGCCATTGTGCAGTGGCAAGAGTTGGAATCCAAGATTATGTAGACCTGCGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATGGATCTCTTCACATATaGCTGATGCAAGGGTGTACA +
Preference number: 5 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHGSLHI*LMQGCT
Trigger: TGTACACCCTTGCATCAGCAATATGTGAAGAGATCC...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCTGGTGAATTTGTTCATAATAAAACAAGGCCTACCTGTCAAGCCCCTTGTGCTCTTGAAAACATATTGTaGTGTTTTCAGCTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: SGEFVHNKTRPTCQAPCALENIL*CFQLVD
Trigger: GTCAACCAGCTGAAAACACAACAATATGTTTTCAAG...AGCACAAGGGGCTTGACAGGTAGGCCTTGTTTTATTATGAACAAATTCACCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CCAAGTGGTATTTCTTCACCGTTGGAAACTTTTCTAAGGGCAAATCAACTCCAGTTTCTAAACACTCAGTaGGAAGTACACTCACAACTA +
Preference number: 5 (lower is better)
Translates to: PSGISSPLETFLRANQLQFLNTQ*EVHSQL
Trigger: TAGTTGTGAGTGTACTTCCAACTGAGTGTTTAGAAA...CTGGAGTTGATTTGCCCTTAGAAAAGTTTCCAACGGTGAAGAAATACCACTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCCAACAGAGGTGGTACAAGGCCACAAGTAATAACTGATCACCCTTGTTATACTTTCCATACATTTGTTTaGTGTCCTGGGAGAATTTCA +
Preference number: 5 (lower is better)
Translates to: SNRGGTRPQVITDHPCYTFHTFV*CPGRIS
Trigger: TGAAATTCTCCCAGGACACAAAACAAATGTATGGAA...AGTATAACAAGGGTGATCAGTTATTACTTGTGGCCTTGTACCACCTCTGTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp GGAATGACTTCCAAATTGAATCTGAATGAATCACTTCAGTTCCCTGTTTCTCATTTTACCAAGCGTGTTTaGTTTCATCTCAGGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GMTSKLNLNESLQFPVSHFTKRV*FHLREK
Trigger: CTTCTCCCTGAGATGAAACAAAACACGCTTGGTAAA...ATGAGAAACAGGGAACTGAAGTGATTCATTCAGATTCAATTTGGAAGTCATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp ATAGATCTGACTTCAGTGGAAAGAGGGAATATCCAGTGCTACAATGTTCTCAAAGCAACGGAAGTAGATTaGGTCCTTCATGATCTAATT +
Preference number: 5 (lower is better)
Translates to: IDLTSVERGNIQCYNVLKATEVD*VLHDLI
Trigger: AATTAGATCATGAAGGACCAAATCTACTTCCGTTGC...TTTGAGAACATTGTAGCACTGGATATTCCCTCTTTCCACTGAAGTCAGATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp CTCTTAAAGAGCTTTGCTCCTCCTTCTATACTGATACACTATTCTTTAAAATGCCAATTGCCTCTGTCCTaGTTCACCAAGAAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: LLKSFAPPSILIHYSLKCQLPLS*FTKKAE
Trigger: TTCTGCTTTCTTGGTGAACAAGGACAGAGGCAATTG...GCATTTTAAAGAATAGTGTATCAGTATAGAAGGAGGAGCAAAGCTCTTTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS-3UTR CAA 90 bp TCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACTTGTTGTGCATAATCCTTCTGTaGAGGAAGTCTTCCTTAATG +
Preference number: 5 (lower is better)
Translates to: SVEEVFLNDDACFSPNLLCIILL*RKSSLM
Trigger: CATTAAGGAAGACTTCCTCAACAGAAGGATTATGCA...CAACAAGTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS-3UTR CAA 90 bp AATCCTTCTGTTGAGGAAGTCTTCCTTAATGATGATGCATGTTTTTCTCCTAACTTGAAGGTGGTAAGATaGGTTTTTCTTCCAACATCT +
Preference number: 5 (lower is better)
Translates to: NPSVEEVFLNDDACFSPNLKVVR*VFLPTS
Trigger: AGATGTTGGAAGAAAAACCAATCTTACCACCTTCAA...GTTAGGAGAAAAACATGCATCATCATTAAGGAAGACTTCCTCAACAGAAGGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS CAA 90 bp ACGCTGAGCATGACCAGCCCCAGCACACTGGCGACCCGGGCCATTTaGCAGTTTCTCATCCCGGGCTGGGCTGGGTTCAGGGAAACCGGG +
Preference number: 6 (lower is better)
Translates to: TLSMTSPSTLATRAI*QFLIPGWAGFRETG
Trigger: CCCGGTTTCCCTGAACCCAGCCCAGCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCGCCAGTGTGCTGGGGCTGGTCATGCTCAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CAA 72 bp ATGACCAGCCCCAGCACACTGGCGACCCGGGCCATTTaGCAGTTTCTCATCCCGGGCTGGGCTGGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: MTSPSTLATRAI*QFLIPGWAGFR
Trigger: CCTGAACCCAGCCCAGCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCGCCAGTGTGCTGGGGCTGGTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 72 bp GCGACCCGGGCCATTTTGCAGTTTCTCATCCCGGGCTaGGCTGGGTTCAGGGAAACCGGGGAAATCGGTCCA +
Preference number: 6 (lower is better)
Translates to: ATRAILQFLIPG*AGFRETGEIGP
Trigger: TGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGATGAGAAACTGCAAAATGGCCCGGGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CAA 90 bp ATCCCGGGCTGGGCTGGGTTCAGGGAAACCGGGGAAATCGGTCCATaGAGCGGCCAGCAGCTCGCTGGCGTGTATATATGTGTGTGTGTG +
Preference number: 6 (lower is better)
Translates to: IPGWAGFRETGEIGP*SGQQLAGVYICVCV
Trigger: CACACACACACATATATACACGCCAGCGAGCTGCTGGCCGCTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 72 bp GGGCTGGGTTCAGGGAAACCGGGGAAATCGGTCCATTaGGCGGCCAGCAGCTCGCTGGCGTGTATATATGTG +
Preference number: 6 (lower is better)
Translates to: GLGSGKPGKSVH*AASSSLACIYV
Trigger: CACATATATACACGCCAGCGAGCTGCTGGCCGCTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 72 bp TTGGTGAGCCCTTCCCCATGCATTCGGTACAGCAGCTaGAACTCAGCAGGCAGCTGGTGGGACTCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: LVSPSPCIRYSS*NSAGSWWDSCH
Trigger: GTGGCAGGAGTCCCACCAGCTGCCTGCTGAGTTTCAGCTGCTGTACCGAATGCATGGGGAAGGGCTCACCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 72 bp CCGGGCCATTTTGCAGTTTCTCATCCCGGGCTGGGCTaGGTTCAGGGAAACCGGGGAAATCGGTCCATTGAG +
Preference number: 6 (lower is better)
Translates to: PGHFAVSHPGLG*VQGNRGNRSIE
Trigger: CTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCAGCCCGGGATGAGAAACTGCAAAATGGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CAA 72 bp TGGGCTGGGTTCAGGGAAACCGGGGAAATCGGTCCATaGAGCGGCCAGCAGCTCGCTGGCGTGTATATATGT +
Preference number: 6 (lower is better)
Translates to: WAGFRETGEIGP*SGQQLAGVYIC
Trigger: ACATATATACACGCCAGCGAGCTGCTGGCCGCTCAATGGACCGATTTCCCCGGTTTCCCTGAACCCAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 72 bp GGAGTTCTTAGGCACAGTGTGACAGAGTCAGCTTGGTaGGCCCTTCCCCATGCATTCGGTACAGCAGCTGAA +
Preference number: 6 (lower is better)
Translates to: GVLRHSVTESAW*ALPHAFGTAAE
Trigger: TTCAGCTGCTGTACCGAATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTGTGCCTAAGAACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CAA 90 bp CCAAGGGCAGGCGAGGCTGCCTGTCACAAGGGAGGTCAGTCTGATTaGTTAAGGCCCTCGGCTTCTTCCAAAGAGCAAGAGAACTTATTC +
Preference number: 6 (lower is better)
Translates to: PRAGEAACHKGGQSD*LRPSASSKEQENLF
Trigger: GAATAAGTTCTCTTGCTCTTTGGAAGAAGCCGAGGGCCTTAACAAATCAGACTGACCTCCCTTGTGACAGGCAGCCTCGCCTGCCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590600.1
CDS TCA 72 bp TTTGGCGCTTTCCGTTTGGAGTTCTTAGGCACAGTGTaGCAGAGTCAGCTTGGTGAGCCCTTCCCCATGCAT +
Preference number: 6 (lower is better)
Translates to: FGAFRLEFLGTV*QSQLGEPFPMH
Trigger: ATGCATGGGGAAGGGCTCACCAAGCTGACTCTGTCACACTGTGCCTAAGAACTCCAAACGGAAAGCGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CAA 72 bp GAAGGTGGTAAGATTGGTTTTTCTTCCAACATCTCTTaGGAAAGCCTCCGTAGGGGCGAAATTGCAACGGAA +
Preference number: 6 (lower is better)
Translates to: EGGKIGFSSNIS*ESLRRGEIATE
Trigger: TTCCGTTGCAATTTCGCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAGAAAAACCAATCTTACCACCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324000.4
ENST00000586360.1
CDS CCA 72 bp AAGGTGGTAAGATTGGTTTTTCTTCCAACATCTCTTTaGAAAGCCTCCGTAGGGGCGAAATTGCAACGGAAA +
Preference number: 6 (lower is better)
Translates to: KVVRLVFLPTSL*KASVGAKLQRK
Trigger: TTTCCGTTGCAATTTCGCCCCTACGGAGGCTTTCCAAAGAGATGTTGGAAGAAAAACCAATCTTACCACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000324000.4
ENST00000586360.1
CDS CCA 72 bp TTGGGGTCAAATCCAAACGGCCAAAATCCATACAAGTaGATCTCTTCACATATTGCTGATGCAAGGGTGTAC +
Preference number: 6 (lower is better)
Translates to: LGSNPNGQNPYK*ISSHIADARVY
Trigger: GTACACCCTTGCATCAGCAATATGTGAAGAGATCCACTTGTATGGATTTTGGCCGTTTGGATTTGACCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS TCA 72 bp CCAAAATCCATACAAGTGGATCTCTTCACATATTGCTaGTGCAAGGGTGTACATAAGAATACCTGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: PKSIQVDLFTYC*CKGVHKNTCAQ
Trigger: CTGAGCACAGGTATTCTTATGTACACCCTTGCATCAGCAATATGTGAAGAGATCCACTTGTATGGATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CCA 72 bp TGTCATAGTAATGGTATGGAAGATCTTCCCTTGTGTTaGGGTCAAATCCAAACGGCCAAAATCCATACAAGT +
Preference number: 6 (lower is better)
Translates to: CHSNGMEDLPLC*GQIQTAKIHTS
Trigger: ACTTGTATGGATTTTGGCCGTTTGGATTTGACCCCAACACAAGGGAAGATCTTCCATACCATTACTATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324000.4
CDS CAA 72 bp CACTGTTTACAGCAATGTAAAGTTGCAAAGAACCTGTaGACATGTTGCATTATATTTCCCGGCCAAGCCAGT +
Preference number: 6 (lower is better)
Translates to: HCLQQCKVAKNL*TCCIIFPGQAS
Trigger: ACTGGCTTGGCCGGGAAATATAATGCAACATGTCAACAGGTTCTTTGCAACTTTACATTGCTGTAAACAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS CAA 90 bp TCATCAGAGCACTGTTTACAGCAATGTAAAGTTGCAAAGAACCTGTaGACATGTTGCATTATATTTCCCGGCCAAGCCAGTTGGACTTTT +
Preference number: 6 (lower is better)
Translates to: SSEHCLQQCKVAKNL*TCCIIFPGQASWTF
Trigger: AAAAGTCCAACTGGCTTGGCCGGGAAATATAATGCAACATGTCAACAGGTTCTTTGCAACTTTACATTGCTGTAAACAGTGCTCTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586360.1
CDS CAA 72 bp AACATATTTATGGCTGGAATAATCATAGTGCATCAGTaGTCCAATCCGAACACTATTCTTGGTCAAAGAAAA +
Preference number: 6 (lower is better)
Translates to: NIFMAGIIIVHQ*SNPNTILGQRK
Trigger: TTTTCTTTGACCAAGAATAGTGTTCGGATTGGACAACTGATGCACTATGATTATTCCAGCCATAAATATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324000.4