RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST7L (Homo sapiens)

Ensembl gene IDs: ENSG00000007341

Ensembl transcript IDs: ENST00000343210.11, ENST00000358039.9, ENST00000360743.8, ENST00000361846.7, ENST00000369664.1, ENST00000369666.5, ENST00000369669.5, ENST00000418497.5, ENST00000459630.5, ENST00000463235.5, ENST00000466360.5, ENST00000467335.5, ENST00000470519.5, ENST00000470683.1, ENST00000473206.5, ENST00000477332.5, ENST00000477682.1, ENST00000479436.5, ENST00000480988.5, ENST00000485753.5, ENST00000490067.5, ENST00000490715.5, ENST00000492274.1, ENST00000497235.5, ENST00000497457.5, ENST00000498197.1, ENST00000498383.5

Found 764 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTaGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCA +
Preference number: 1 (lower is better)
Translates to: CIPGQVGGTLGAWAL*REVPDTEFSVSNPA
Trigger: TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 90 bp TTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: FSLAPAAKLQHQRTM*CIPGQVGGTLGAWA
Trigger: GGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp ACCTGTAGCTCACACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTaGCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTG +
Preference number: 1 (lower is better)
Translates to: TCSSHLVIDGLGGGL*PDPPLGNCLLLRGL
Trigger: CAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTGTGAGCTACAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp ACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTaGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCT +
Preference number: 1 (lower is better)
Translates to: TREQCDAFLGRSVGP*APGPCGERCQTQSS
Trigger: AGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp ATTACAGCACCAGAGAACAATGTGATGCATTCCTGGGCAGGTCGGTaGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACAC +
Preference number: 1 (lower is better)
Translates to: ITAPENNVMHSWAGR*DPGRLGLVERGARH
Trigger: GTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp GATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGAT +
Preference number: 1 (lower is better)
Translates to: DGLGGGLCPDPPLGN*LLLRGLGIFEAMLD
Trigger: ATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp TCCTGCAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGA +
Preference number: 1 (lower is better)
Translates to: SCSQITAPENNVMHS*AGRWDPGRLGLVER
Trigger: TCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp GCTGGGGCGAAGGGAGGACGCCAGGGAGAGTATGTTTCTCATCCCTaGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTACAGCACCAG +
Preference number: 1 (lower is better)
Translates to: AGAKGGRQGEYVSHP*EAFSLAPAAKLQHQ
Trigger: CTGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATACTCTCCCTGGCGTCCTCCCTTCGCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp GCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTaGTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGATAACA +
Preference number: 1 (lower is better)
Translates to: ALVEASAPTLHLGTA*YYGGWASLKQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp AATACGGGAGAGCTTCACATTACACAGAGACCTGTAGCTCACACCTaGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCAC +
Preference number: 1 (lower is better)
Translates to: NTGELHITQRPVAHT*LLMALVEASAPTLH
Trigger: GTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTGTGAGCTACAGGTCTCTGTGTAATGTGAAGCTCTCCCGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 90 bp GTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCAGAAATaGAATACGGGAGAGCTTCACATTACACAGAGACCTGTAGCTCAC +
Preference number: 1 (lower is better)
Translates to: VLRKQSCRAAPWVQK*NTGELHITQRPVAH
Trigger: GTGAGCTACAGGTCTCTGTGTAATGTGAAGCTCTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp TCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGTTGGATAACAAGAAAGAGATGCTTC +
Preference number: 1 (lower is better)
Translates to: SAPTLHLGTACYYGG*ASLKQCWITRKRCF
Trigger: GAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp TATTTAAATGCACTCAGTGGTCATAGGGCAGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCAGGGAGAGTATGTTTCTCATCCCTG +
Preference number: 1 (lower is better)
Translates to: YLNALSGHRAEAQAS*GEGRTPGRVCFSSL
Trigger: CAGGGATGAGAAACATACTCTCCCTGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTCTGCCCTATGACCACTGAGTGCATTTAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp GGGAGAGTATGTTTCTCATCCCTGGGAGGCATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCAGAGAACAATGTGATGCATTCCTGG +
Preference number: 1 (lower is better)
Translates to: GRVCFSSLGGIQPSS*SQITAPENNVMHSW
Trigger: CCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATACTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp GTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAAGGTAAAGGGATAGAAAAGAGAGGG +
Preference number: 1 (lower is better)
Translates to: VIGRYRAIASGVSVI*PVPDLKGKGIEKRG
Trigger: CCCTCTCTTTTCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 90 bp GCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATaGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTT +
Preference number: 1 (lower is better)
Translates to: APYVLRMMEQSPMTA*GITAKPTAHDLWLF
Trigger: AAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp CTGTATAAGTTCGCAAGGCTGGTTCATGCCAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGC +
Preference number: 1 (lower is better)
Translates to: LYKFARLVHARDSEM*TLCAENDGAVSYDC
Trigger: GCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCAGCCTTGCGAACTTATACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp GGGGGTTGGGCATCTTTGAAGCAATGTTGGATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGCCCTCCCTGTCAGCCTGAGCACAAC +
Preference number: 1 (lower is better)
Translates to: GGWASLKQCWITRKR*FLFTLCPPCQPEHN
Trigger: GTTGTGCTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 90 bp CCTTTGTCTCACTTCCCTTATCAAGAACACCAACCAGTAAGTCTTTaGCAAATTCTCAGACCCACTCAGGACACGAGTCTCTACATGGCT +
Preference number: 1 (lower is better)
Translates to: PLSHFPYQEHQPVSL*QILRPTQDTSLYMA
Trigger: AGCCATGTAGAGACTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATAAGGGAAGTGAGACAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 90 bp CCTGTCCCTGACCTCAAAGGTAAAGGGATAGAAAAGAGAGGGCGTTaGCAAACTCATTTTCCCACTTCCCACTCATGGCTTATATTATCT +
Preference number: 1 (lower is better)
Translates to: PVPDLKGKGIEKRGR*QTHFPTSHSWLILS
Trigger: AGATAATATAAGCCATGAGTGGGAAGTGGGAAAATGAGTTTGTCAACGCCCTCTCTTTTCTATCCCTTTACCTTTGAGGTCAGGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 90 bp GACAAACTCATTTTCCCACTTCCCACTCATGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTCCTCATTTACTTAAGATGTTTTAGT +
Preference number: 1 (lower is better)
Translates to: DKLIFPLPTHGLYYL*ASRWLFLIYLRCFS
Trigger: ACTAAAACATCTTAAGTAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGAAGTGGGAAAATGAGTTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGCTTGGTGGAGGCCTCTaGCCCGACCCTCCACTTGGG +
Preference number: 2 (lower is better)
Translates to: CIPGQVGGTLGAWALWRELGGGL*PDPPLG
Trigger: CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAG...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACGGACCAGAACTCCTCTaGTGGGTGGTTGGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: MALVEASAPTLHLGTACYGPELL*WVVGGR
Trigger: CCTTCCCCCAACCACCCACCAGAGGAGTTCTGGTCC...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 2 (lower is better)
Translates to: IPGQVGGTLGAWALWREVQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTG +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGPPLGN*LLLRGL
Trigger: CAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGG...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: CIPGQVGGTLGAWALWREGNSLV*GPELLW
Trigger: CCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCC...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCC +
Preference number: 2 (lower is better)
Translates to: IPGQVGGTLGAWALWREVLQATL*FGDQNS
Trigger: GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAG...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTCAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 2 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAGGAGCCAAAATGCGGTaGCTTGACTTCAACCCCAAC +
Preference number: 2 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAGAKMR*LDFNPN
Trigger: GTTGGGGTTGAAGTCAAGTCACCGCATTTTGGCTCC...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 2 (lower is better)
Translates to: GQVGGTLGAWALWREVPDGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAGNSLV*GPELLW
Trigger: CCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCC...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACTCACAGTTGCTACAGTaGATTGAGCTTTCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: GQVGGTLGAWALWREVPDSQLLQ*IELSQK
Trigger: CTTCTGAGAAAGCTCAATTCACTGTAGCAACTGTGA...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAA +
Preference number: 2 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAGVSVI*PVPDLK
Trigger: TTTGAGGTCAGGGACAGGGCATATTACTGACACCCC...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 2 (lower is better)
Translates to: IPGQVGGTLGAWALWREVELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: ASAPTLHLGTACYYGGWASPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGATAAGTTCGCAAGGCTaGTTCATGCCAGAGATAGTG +
Preference number: 2 (lower is better)
Translates to: IPGQVGGTLGAWALWREVISSQG*FMPEIV
Trigger: CACTATCTCTGGCATGAACCAGCCTTGCGAACTTAT...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGG +
Preference number: 2 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVGNSLV*GPELLW
Trigger: CCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCC...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCCTGTAGCTCACACCTaGTTATTGATGGCCTTGGTG +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGPVAHT*LLMALV
Trigger: CACCAAGGCCATCAATAACCAGGTGTGAGCTACAGG...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 90 bp TGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTaGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: WLLMALVEASAPTLH*GTACYYGGWASLKQ
Trigger: TTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 90 bp CACATTACACAGAGACCTGTAGCTCACACCTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGC +
Preference number: 2 (lower is better)
Translates to: HITQRPVAHTWLLMA*VEASAPTLHLGTAC
Trigger: GCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTGTGAGCTACAGGTCTCTGTGTAATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAEDAQG*GHQSPS
Trigger: GCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTC...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 2 (lower is better)
Translates to: GQVGGTLGAWALWREVPDSYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 2 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCCTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCC +
Preference number: 2 (lower is better)
Translates to: LLMALVEASAPTLHLGTALQATL*FGDQNS
Trigger: GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAG...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGATTCTCCTCAAAGCCTaGGGATGCCCAGGGTTGGGG +
Preference number: 2 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVILLKA*GCPGLG
Trigger: CCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAAT...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTCAAAGCAGAGTGGCTaGGACTGTATAAGTTCGCAA +
Preference number: 2 (lower is better)
Translates to: MALVEASAPTLHLGTACYSKQSG*DCISSQ
Trigger: TTGCGAACTTATACAGTCTCAGCCACTCTGCTTTGA...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 2 (lower is better)
Translates to: GQVGGTLGAWALWREVPDITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGT +
Preference number: 2 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGCYYGG*ASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCA...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTGTTGCTACAGTGAATTaGGCTTTCTCAGAAGCTATT +
Preference number: 2 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSVATVN*AFSEAI
Trigger: AATAGCTTCTGAGAAAGCTCAATTCACTGTAGCAAC...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTCCAAAGGAGCCAAAATaGGGTGACTTGACTTCAACC +
Preference number: 2 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFPKEPK*GDLTST
Trigger: GGTTGAAGTCAAGTCACCGCATTTTGGCTCCTTTGG...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGRDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 2 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGATAAGTTCGCAAGGCTaGTTCATGCCAGAGATAGTG +
Preference number: 2 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVISSQG*FMPEIV
Trigger: CACTATCTCTGGCATGAACCAGCCTTGCGAACTTAT...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCA +
Preference number: 2 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAEAQAS*GEGRTP
Trigger: TGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTC...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCCTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LLMALVEASAPTLHLGTALTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 2 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCGTTGCTACAGTGAATTaGGCTTTCTCAGAAGCTATT +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGVATVN*AFSEAI
Trigger: AATAGCTTCTGAGAAAGCTCAATTCACTGTAGCAAC...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAGAGCCGCCCCCTGGGTaGAGAAATGAAATACGGGAG +
Preference number: 2 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAEPPPG*RNEIRE
Trigger: CTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTC...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 2 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSSYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 2 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGTIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGCAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 2 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: LLMALVEASAPTLHLGTARDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 2 (lower is better)
Translates to: LLMALVEASAPTLHLGTATIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 90 bp CTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTaGGGCATCTTTGAAGCAATGTTGGATAACAAGAAAGAGATGCTT +
Preference number: 2 (lower is better)
Translates to: LCPDPPLGNCLLLRG*GIFEAMLDNKKEML
Trigger: AAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGGAGCCAAAATGCGGTaGCTTGACTTCAACCCCAAC +
Preference number: 2 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLGAKMR*LDFNPN
Trigger: GTTGGGGTTGAAGTCAAGTCACCGCATTTTGGCTCC...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: LLMALVEASAPTLHLGTAIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACCTCCGTAAGCAATCCTaGAGAGCCGCCCCCTGGGTG +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDLRKQS*RAAPWV
Trigger: CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAG...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTCTTTGAAGCAATGTTaGATAACAAGAAAGAGATGC +
Preference number: 2 (lower is better)
Translates to: MALVEASAPTLHLGTACYSLKQC*ITRKRC
Trigger: GCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGA...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 90 bp CAAGGAATATCTACAAAGTCACATTACCAACCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTCCTCTGGTGGGTGGTTGGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: QGISTKSHYQPAGNS*VWGPELLWWVVGGR
Trigger: CCTTCCCCCAACCACCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTGTAGATATTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 2 (lower is better)
Translates to: WALWREVPDTEFSVSNPAGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGGCAGTCTCCTATGACTaGATGGGGTATAACTGCCAA +
Preference number: 2 (lower is better)
Translates to: HLGTACYYGGWASLKQCWAVSYD*MGYNCQ
Trigger: TTGGCAGTTATACCCCATGCAGTCATAGGAGACTGC...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGTTTTTAACTCTTAACTaGGTTAGAAAACTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGFLTLN*VRKLES
Trigger: GCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAA...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGTTCTGGATGTGCAAATaGAAGGCAAGCATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: HLGTACYYGGWASLKQCWFWMCK*KASILP
Trigger: TGGGAGAATGCTTGCCTTGCATTTGCACATCCAGAA...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 2 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 2 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCATCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSASPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 2 (lower is better)
Translates to: WALWREVPDTEFSVSNPATIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGGTTGCTACAGTGAATTaGGCTTTCTCAGAAGCTATT +
Preference number: 2 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVVATVN*AFSEAI
Trigger: AATAGCTTCTGAGAAAGCTCAATTCACTGTAGCAAC...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGTTCCTTTTCACTCTTTaGCCTCCCTGTCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEFLFTL*PPCQPE
Trigger: CTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAA...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 2 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLTGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCT +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDNVMHS*AGRWDP
Trigger: AGGGTCCCACCGACCTGCCCAGGAATGCATCACATT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 90 bp ACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACAAGAAAGAGATGCTTCCTTTTCACT +
Preference number: 2 (lower is better)
Translates to: TLHLGTACYYGGWAS*KQCWITRKRCFLFT
Trigger: AGTGAAAAGGAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 2 (lower is better)
Translates to: HARDSEMCTLCAENDGAVGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTC +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDHQRTM*CIPGQV
Trigger: GACCTGCCCAGGAATGCATCACATTGTTCTCTGGTG...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: STSKRIPIGSGFNQGISTEDAQG*GHQSPS
Trigger: GCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTC...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 2 (lower is better)
Translates to: QSHITNLQATLWFGDQNSKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 2 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYTGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAACTGCTCATGACCTGTaGTTGTTTTTAACTCTTAAC +
Preference number: 2 (lower is better)
Translates to: WALWREVPDTEFSVSNPATAHDL*LFLTLN
Trigger: GTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 90 bp TCCTTTGTCTCACTTCCCTTATCAAGAACACCAACCAGTAAGTCTTaGCCAAATTCTCAGACCCACTCAGGACACGAGTCTCTACATGGC +
Preference number: 2 (lower is better)
Translates to: SFVSLPLSRTPTSKS*PNSQTHSGHESLHG
Trigger: GCCATGTAGAGACTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATAAGGGAAGTGAGACAAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGTTCTGGATGTGCAAATaGAAGGCAAGCATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEFWMCK*KASILP
Trigger: TGGGAGAATGCTTGCCTTGCATTTGCACATCCAGAA...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAA +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDGVSVI*PVPDLK
Trigger: TTTGAGGTCAGGGACAGGGCATATTACTGACACCCC...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACTTCCTTTTCACTCTTTaGCCTCCCTGTCAGCCTGAG +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDFLFTL*PPCQPE
Trigger: CTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAA...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 2 (lower is better)
Translates to: QSHITNLQATLWFGDQNSTIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTACTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLLTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTCCTTGTGGAGAGAGGTaGCAGACACAGAGTTCTCCG +
Preference number: 2 (lower is better)
Translates to: CKSKNASLNLALQIKANFPCGER*QTQSSP
Trigger: CGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGG...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCA +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDIQPSS*SQITAP
Trigger: TGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAAT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGT +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDCYYGG*ASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCA...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACCTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDLTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 2 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACTTCTGGATGTGCAAATaGAAGGCAAGCATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDFWMCK*KASILP
Trigger: TGGGAGAATGCTTGCCTTGCATTTGCACATCCAGAA...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCACTGCTCATGACCTGTaGTTGTTTTTAACTCTTAAC +
Preference number: 2 (lower is better)
Translates to: QSHITNLQATLWFGDQNSTAHDL*LFLTLN
Trigger: GTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCACTGCTCATGACCTGTaGTTGTTTTTAACTCTTAAC +
Preference number: 2 (lower is better)
Translates to: HARDSEMCTLCAENDGAVTAHDL*LFLTLN
Trigger: GTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACTCACAGTTGCTACAGTaGATTGAGCTTTCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDSQLLQ*IELSQK
Trigger: CTTCTGAGAAAGCTCAATTCACTGTAGCAACTGTGA...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR TCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACACAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 2 (lower is better)
Translates to: STSKRIPIGSGFNQGISTQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTTCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 2 (lower is better)
Translates to: CKSKNASLNLALQIKANFSPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGT +
Preference number: 2 (lower is better)
Translates to: CKSKNASLNLALQIKANFCYYGG*ASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCA...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTACTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 2 (lower is better)
Translates to: CKSKNASLNLALQIKANFTGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAGCAGTCTCCTATGACTaGATGGGGTATAACTGCCAA +
Preference number: 2 (lower is better)
Translates to: STSKRIPIGSGFNQGISTAVSYD*MGYNCQ
Trigger: TTGGCAGTTATACCCCATGCAGTCATAGGAGACTGC...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACTTTTTAACTCTTAACTaGGTTAGAAAACTGGAGAGC +
Preference number: 2 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDFLTLN*VRKLES
Trigger: GCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAA...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: STSKRIPIGSGFNQGISTRDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 2 (lower is better)
Translates to: CKSKNASLNLALQIKANFITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 2 (lower is better)
Translates to: STSKRIPIGSGFNQGISTSYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR GCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACACTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 2 (lower is better)
Translates to: STSKRIPIGSGFNQGISTLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTaGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGC +
Preference number: 3 (lower is better)
Translates to: GQVGGTLGAWAL*REVPDTEFSVS
Trigger: GCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACCCAAAATGCGGTGACTaGACTTCAACCCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: GQVGGTLGAWALWREVPDPKCGD*TSTPTA
Trigger: GGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTGG...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACCTGCTACTACGGGGGTaGGGCATCTTTGAAGCAATG +
Preference number: 3 (lower is better)
Translates to: GQVGGTLGAWALWREVPDLLLRG*GIFEAM
Trigger: CATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAG...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp TGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTaGGAACTGCCTGCTACTACGGGGGTTGGGCATCTT +
Preference number: 3 (lower is better)
Translates to: WPWWRPLPRPST*ELPATTGVGHL
Trigger: AAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp CAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTaGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACA +
Preference number: 3 (lower is better)
Translates to: QCDAFLGRSVGP*APGPCGERCQT
Trigger: TGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp GGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTGGGCATCTTTGAAGCA +
Preference number: 3 (lower is better)
Translates to: GGGLCPDPPLGN*LLLRGLGIFEA
Trigger: TGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTG +
Preference number: 3 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGRQLFG*GTRTPL
Trigger: CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCT...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp GAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTaGTACTACGGGGGTTGGGCATCTTTGAAGCAATGT +
Preference number: 3 (lower is better)
Translates to: EASAPTLHLGTA*YYGGWASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTG +
Preference number: 3 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGRQLFG*GTRTPL
Trigger: CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCT...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACA +
Preference number: 3 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSGGWAS*KQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 3 (lower is better)
Translates to: CIPGQVGGTLGAWALWREAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 72 bp GCTCCTGCAGCCAAATTACAGCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTCGGTGGGACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: APAAKLQHQRTM*CIPGQVGGTLG
Trigger: GCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp TCACACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTaGCCCGACCCTCCACTTGGGAACTGCCTGCTACTA +
Preference number: 3 (lower is better)
Translates to: SHLVIDGLGGGL*PDPPLGNCLLL
Trigger: TAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp CAAATTACAGCACCAGAGAACAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTT +
Preference number: 3 (lower is better)
Translates to: QITAPENNVMHS*AGRWDPGRLGL
Trigger: AAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTCTGGTGCTGTAATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp GCACTCAGTGGTCATAGGGCAGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCAGGGAGAGTATGTTTC +
Preference number: 3 (lower is better)
Translates to: ALSGHRAEAQAS*GEGRTPGRVCF
Trigger: GAAACATACTCTCCCTGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTCTGCCCTATGACCACTGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGCAATTTCATCTACAGTaGTCCTTTTTGACAGCTTCC +
Preference number: 3 (lower is better)
Translates to: CIPGQVGGTLGAWALWREQFHLQ*SFLTAS
Trigger: GGAAGCTGTCAAAAAGGACAACTGTAGATGAAATTG...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp GAGCTTCACATTACACAGAGACCTGTAGCTCACACCTaGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCG +
Preference number: 3 (lower is better)
Translates to: ELHITQRPVAHT*LLMALVEASAP
Trigger: CGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTGTGAGCTACAGGTCTCTGTGTAATGTGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp AAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGGTGGGTGGTTGGGGGA +
Preference number: 3 (lower is better)
Translates to: KSHYQPAGNSLV*GPELLWWVVGG
Trigger: TCCCCCAACCACCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp AAGGGAGGACGCCAGGGAGAGTATGTTTCTCATCCCTaGGAGGCATTCAGCCTAGCTCCTGCAGCCAAATTA +
Preference number: 3 (lower is better)
Translates to: KGGRQGEYVSHP*EAFSLAPAAKL
Trigger: TAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATACTCTCCCTGGCGTCCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 3 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGAGAAAAGAGAGGGCGTaGACAAACTCATTTTCCCAC +
Preference number: 3 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVRKERA*TNSFSH
Trigger: GTGGGAAAATGAGTTTGTCAACGCCCTCTCTTTTCT...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp GTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATaGGGTATAACTGCCAAGCCTACTGCTCATGACCTG +
Preference number: 3 (lower is better)
Translates to: VLRMMEQSPMTA*GITAKPTAHDL
Trigger: CAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp CTACAAAGTCACATTACCAACCTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCCTCTGGTGGGTGGTTG +
Preference number: 3 (lower is better)
Translates to: LQSHITNLQATL*FGDQNSSGGWL
Trigger: CAACCACCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCCAAAATGCGGTGACTaGACTTCAACCCCAACAGCC +
Preference number: 3 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMEPKCGD*TSTPTA
Trigger: GGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTGG...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 3 (lower is better)
Translates to: WALWREVPDTEFSVSNPAAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAAAACAAAAACAAACATaGCCTGGCCCTGAGGGTCTG +
Preference number: 3 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAKQKQT*PGPEGL
Trigger: CAGACCCTCAGGGCCAGGCAATGTTTGTTTTTGTTT...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp TGTTTCTCATCCCTGGGAGGCATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCAGAGAACAATGTGATG +
Preference number: 3 (lower is better)
Translates to: CFSSLGGIQPSS*SQITAPENNVM
Trigger: CATCACATTGTTCTCTGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAATGCCTCCCAGGGATGAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp ACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGTTGGATAACAAGAAAG +
Preference number: 3 (lower is better)
Translates to: TLHLGTACYYGG*ASLKQCWITRK
Trigger: CTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: WALWREVPDTEFSVSNPAAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 3 (lower is better)
Translates to: HLGTACYYGGWASLKQCWAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp AGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAAGGTAAAGGGATAGAA +
Preference number: 3 (lower is better)
Translates to: RYRAIASGVSVI*PVPDLKGKGIE
Trigger: TTCTATCCCTTTACCTTTGAGGTCAGGGACAGGGCATATTACTGACACCCCACTGGCTATTGCCCTATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCG +
Preference number: 3 (lower is better)
Translates to: CKSKNASLNLALQIKANFWLLMA*VEASAP
Trigger: CGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCA...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCATTTCTATTCCTCCTGTaGCAGGGAGTAATTTCTTCT +
Preference number: 3 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAFLFLL*QGVISS
Trigger: AGAAGAAATTACTCCCTGCAACAGGAGGAATAGAAA...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp GTACATATACAGACACATAGAGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATCCTCCTCTCCCCAACA +
Preference number: 3 (lower is better)
Translates to: VHIQTHRELLSG*IGVLLILLSPT
Trigger: TGTTGGGGAGAGGAGGATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTCTCTATGTGTCTGTATATGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp CACTTCCCTTATCAAGAACACCAACCAGTAAGTCTTTaGCAAATTCTCAGACCCACTCAGGACACGAGTCTC +
Preference number: 3 (lower is better)
Translates to: HFPYQEHQPVSL*QILRPTQDTSL
Trigger: GAGACTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATAAGGGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTCCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTC +
Preference number: 3 (lower is better)
Translates to: CKSKNASLNLALQIKANFPAGNS*VWGPEL
Trigger: GAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGG...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACA +
Preference number: 3 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDGGWAS*KQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 72 bp ATCAGTGGTGAAGAATTACCATCAAAGCAGAGTGGCTaGGACTGTATAAGTTCGCAAGGCTGGTTCATGCCA +
Preference number: 3 (lower is better)
Translates to: ISGEELPSKQSG*DCISSQGWFMP
Trigger: TGGCATGAACCAGCCTTGCGAACTTATACAGTCTCAGCCACTCTGCTTTGATGGTAATTCTTCACCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR GCA 72 bp GCATCTTTGAAGCAATGTTGGATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGCCCTCCCTGTCAGCCT +
Preference number: 3 (lower is better)
Translates to: ASLKQCWITRKR*FLFTLCPPCQP
Trigger: AGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 72 bp ACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGTaGTTTGTCCAAGGTCACATGAACAGTGCGTGGCTC +
Preference number: 3 (lower is better)
Translates to: TVTLQMLFRKIW*FVQGHMNSAWL
Trigger: GAGCCACGCACTGTTCATGTGACCTTGGACAAATCACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp TGGATTCCAGGGATGATCTCCATAAGAGAGAAGCACTaGAAAAGACCAAGTGGTGGCTTTATTAGGGTAAAT +
Preference number: 3 (lower is better)
Translates to: WIPGMISIREKH*KRPSGGFIRVN
Trigger: ATTTACCCTAATAAAGCCACCACTTGGTCTTTTCCAGTGCTTCTCTCTTATGGAGATCATCCCTGGAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CCA 72 bp ACTGCTCATGACCTGTGGTTGTTTTTAACTCTTAACTaGGTTAGAAAACTGGAGAGCTTTGGATTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: TAHDLWLFLTLN*VRKLESFGFQG
Trigger: TCCCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR TCA 72 bp TGCTTTAGCATATATGTAATCCTCACAACAACCCTGTaGGGTAGGGGTTACTGTCACTTTACAGATGCTGTT +
Preference number: 3 (lower is better)
Translates to: CFSIYVILTTTL*GRGYCHFTDAV
Trigger: AACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGAGGATTACATATATGCTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
3UTR TCA 72 bp ATTTTCCCACTTCCCACTCATGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTCCTCATTTACTTAAGA +
Preference number: 3 (lower is better)
Translates to: IFPLPTHGLYYL*ASRWLFLIYLR
Trigger: TCTTAAGTAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGAAGTGGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: CKSKNASLNLALQIKANFAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCCTGGGCAGGTCGGTaGGACCCTGGGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWASWAGR*DPGRLG
Trigger: GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGA...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGAGACGCTCCAACAGCTaGGGCTTCACCCACGCCGCC +
Preference number: 4 (lower is better)
Translates to: IPGQVGGTLGAWALWREVRRSNS*GFTHAA
Trigger: GGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCT...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACATTCTCCTCAAAGCCTaGGGATGCCCAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDILLKA*GCPGLG
Trigger: CCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAAT...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACCCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDPPLGN*LLLRGL
Trigger: CAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGG...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCTCCGTAAGCAATCCTaGAGAGCCGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: IPGQVGGTLGAWALWREVLRKQS*RAAPWV
Trigger: CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAG...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACGGGACCCTGGGCGCCTaGGCCTTGTGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYGTLGA*ALWREV
Trigger: CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCC...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCAGGTCGGTGGGACCCTaGGCGCCTGGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGRSVGP*APGPCG
Trigger: TCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCT...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCTCCTGGGCAGGTCGGTaGGACCCTGGGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCSWAGR*DPGRLG
Trigger: GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGA...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp CCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTaGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTA +
Preference number: 4 (lower is better)
Translates to: PGQVGGTLGAWA*WREVPDTEFSV
Trigger: TACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTCTCCGTAAGCAATCCTaGAGAGCCGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSLRKQS*RAAPWV
Trigger: CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAG...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGGACCAGAACTCCTCTaGTGGGTGGTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREGPELL*WVVGGR
Trigger: CCTTCCCCCAACCACCCACCAGAGGAGTTCTGGTCC...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGCCCCGACCCTCCACTTaGGAACTGCCTGCTACTACG +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREPRPST*ELPATT
Trigger: CGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGG...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREEAQAS*GEGRTP
Trigger: TGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTC...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCGCAAACCCTACTTCCTaGGGCGCGGGCGCGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTAANPTS*GAGAGA
Trigger: AGCGCCCGCGCCCGCGCCCCAGGAAGTAGGGTTTGC...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGCACTTGGGAACTGCCTaGTACTACGGGGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREHLGTA*YYGGWA
Trigger: TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTGGACCAGAACTCCTCTaGTGGGTGGTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSGPELL*WVVGGR
Trigger: CCTTCCCCCAACCACCCACCAGAGGAGTTCTGGTCC...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTaGGGAACTGCCTGCTACTACGGGGGTTGGGCATCT +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLH*GTACYYGGWAS
Trigger: AGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTATTCTCCTCAAAGCCTaGGGATGCCCAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSILLKA*GCPGLG
Trigger: CCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAAT...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCTCCGTAAGCAATCCTaGAGAGCCGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVLRKQS*RAAPWV
Trigger: CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAG...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCEDAQG*GHQSPS
Trigger: GCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTC...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGCTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWRELQATL*FGDQNS
Trigger: GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAG...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGT +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDCYYGG*ASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCA...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCGGCGCCTGGGCCTTGTaGAGAGAGGTGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPGAWAL*REVPDT
Trigger: TGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCC...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWANVMHS*AGRWDP
Trigger: AGGGTCCCACCGACCTGCCCAGGAATGCATCACATT...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACGAGAAGGCACATGACTaGAGTACCTCAGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYEKAHD*STSAAQ
Trigger: CTGCGCAGCTGAGGTACTTCAGTCATGTGCCTTCTC...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACTTCTGGATGTGCAAATaGAAGGCAAGCATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDFWMCK*KASILP
Trigger: TGGGAGAATGCTTGCCTTGCATTTGCACATCCAGAA...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREGVSVI*PVPDLK
Trigger: TTTGAGGTCAGGGACAGGGCATATTACTGACACCCC...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGTTCCTTTTCACTCTTTaGCCTCCCTGTCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREFLFTL*PPCQPE
Trigger: CTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAA...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGGAGCCGCCCCCTGGGTaGAGAAATGAAATACGGGAG +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVEPPPG*RNEIRE
Trigger: CTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTC...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCGGACCAGAACTCCTCTaGTGGGTGGTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTAGPELL*WVVGGR
Trigger: CCTTCCCCCAACCACCCACCAGAGGAGTTCTGGTCC...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCCCCCGACCCTCCACTTaGGAACTGCCTGCTACTACG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPPRPST*ELPATT
Trigger: CGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGG...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
61% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCGGAGCCAAAATGCGGTaGCTTGACTTCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGGAKMR*LDFNPN
Trigger: GTTGGGGTTGAAGTCAAGTCACCGCATTTTGGCTCC...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGGAGAAGGCACATGACTaGAGTACCTCAGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVEKAHD*STSAAQ
Trigger: CTGCGCAGCTGAGGTACTTCAGTCATGTGCCTTCTC...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGTTTAGAGAAGGCACATaGCTGAAGTACCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IPGQVGGTLGAWALWREVFREGT*LKYLSC
Trigger: GCAGCTGAGGTACTTCAGTCATGTGCCTTCTCTAAA...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGTCCCTCCAAGCCTTCTaGATAACTGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: IPGQVGGTLGAWALWREVSLQAF*ITVSEG
Trigger: TCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGA...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCACTTGGGAACTGCCTaGTACTACGGGGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCHLGTA*YYGGWA
Trigger: TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTGAAGTACCTCAGCTaGGCAGCCTGTAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGLKYLS*AACSQF
Trigger: AAACTGGCTACAGGCTGCGCAGCTGAGGTACTTCAG...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGGACATGGGGCCCTCTTaGTCGGCGTTTCCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGDMGPS*SAFPGG
Trigger: CCCGCCCGGAAACGCCGACCAAGAGGGCCCCATGTC...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490715.5
3UTR CAA 72 bp CAGAGACCTGTAGCTCACACCTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: QRPVAHTWLLMA*VEASAPTLHLG
Trigger: TCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTGTGAGCTACAGGTCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVHQRTM*CIPGQV
Trigger: GACCTGCCCAGGAATGCATCACATTGTTCTCTGGTG...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACGATGTGCCATGCTTATaGAAGTACCACCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDDVPCL*KYHHSN
Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGCACATC...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGAGGTCGGTGGGACCCTaGGCGCCTGGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLRSVGP*APGPCG
Trigger: TCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTCTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSLTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACATTGCCTGGCCCTaGGGGTCTGTTTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGNIAWP*GSVCKT
Trigger: AGTTTTGCAAACAGACCCTCAGGGCCAGGCAATGTT...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGACTCCCGCGCATAACTaGCATGGGGCCCTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVTPAHN*HGALLV
Trigger: GACCAAGAGGGCCCCATGTCAGTTATGCGCGGGAGT...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490715.5
CDS-3UTR GCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLHGPPS*RYRRRQ
Trigger: CTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTG...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACCCAAAGGAGCCAAAATaGGGTGACTTGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYPKEPK*GDLTST
Trigger: GGTTGAAGTCAAGTCACCGCATTTTGGCTCCTTTGG...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVGVSVI*PVPDLK
Trigger: TTTGAGGTCAGGGACAGGGCATATTACTGACACCCC...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGTTCCTTTTCACTCTTTaGCCTCCCTGTCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGFLFTL*PPCQPE
Trigger: CTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAA...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCA +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYIQPSS*SQITAP
Trigger: TGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAAT...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCCTGAAGTACCTCAGCTaGGCAGCCTGTAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTALKYLS*AACSQF
Trigger: AAACTGGCTACAGGCTGCGCAGCTGAGGTACTTCAG...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWRENPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAATAAGTTCGCAAGGCTaGTTCATGCCAGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAISSQG*FMPEIV
Trigger: CACTATCTCTGGCATGAACCAGCCTTGCGAACTTAT...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGT +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYCYYGG*ASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCA...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATAGGTCGGTGGGACCCTaGGCGCCTGGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYRSVGP*APGPCG
Trigger: TCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCT...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFRRTWF*NAALCS
Trigger: GGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCT...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCTGATGGTCCTGAGCTaGCAGGTTCATGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVLMVLS*QVHVIV
Trigger: TACTATGACATGAACCTGTCAGCTCAGGACCATCAG...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCAACATTGCCTGGCCCTaGGGGTCTGTTTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPNIAWP*GSVCKT
Trigger: AGTTTTGCAAACAGACCCTCAGGGCCAGGCAATGTT...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGTTTAGAGAAGGCACATaGCTGAAGTACCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGFREGT*LKYLSC
Trigger: GCAGCTGAGGTACTTCAGTCATGTGCCTTCTCTAAA...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACCTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCTTCTGGATGTGCAAATaGAAGGCAAGCATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGFWMCK*KASILP
Trigger: TGGGAGAATGCTTGCCTTGCATTTGCACATCCAGAA...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCGGGGTGTCAGTAATATaGCCTGTCCCTGACCTCAAA +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCGVSVI*PVPDLK
Trigger: TTTGAGGTCAGGGACAGGGCATATTACTGACACCCC...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATCTTGGTGGAGGCCTCTaGCCCGACCCTCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYLGGGL*PDPPLG
Trigger: CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAG...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCTGTTCCTCCCATCAGTaGTTGCAAATGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGCSSHQ*LQMAYR
Trigger: TCTGTAAGCCATTTGCAACCACTGATGGGAGGAACA...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSNPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYEDAQG*GHQSPS
Trigger: GCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTC...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACTCTTTGAAGCAATGTTaGATAACAAGAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GQVGGTLGAWALWREVPDSLKQC*ITRKRC
Trigger: GCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGA...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCCCTGTAGCTCACACCTaGTTATTGATGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPPVAHT*LLMALV
Trigger: CACCAAGGCCATCAATAACCAGGTGTGAGCTACAGG...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATCCTGGGCAGGTCGGTaGGACCCTGGGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKSWAGR*DPGRLG
Trigger: GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGTATGTTTCTCATCCCTaGGAGGCATTCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVYVSHP*EAFSLA
Trigger: AGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATA...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGEAQAS*GEGRTP
Trigger: TGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTC...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCCTGATGGTCCTGAGCTaGCAGGTTCATGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTALMVLS*QVHVIV
Trigger: TACTATGACATGAACCTGTCAGCTCAGGACCATCAG...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGATTCTCCTCAAAGCCTaGGGATGCCCAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGILLKA*GCPGLG
Trigger: CCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAAT...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVLTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCTCACAGTTGCTACAGTaGATTGAGCTTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGSQLLQ*IELSQK
Trigger: CTTCTGAGAAAGCTCAATTCACTGTAGCAACTGTGA...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAGAGGTCCCTGTAAGTaGCACATAGAATTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGRGPCK*HIEFGC
Trigger: ACACCCAAATTCTATGTGGCACTTACAGGGACCTCT...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSENGYH*CRRAKS
Trigger: GGATTTTGCTCTTCTACAGCAATGATAGCCATTCTC...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCGCAGTCTCCTATGACTaGATGGGGTATAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTAAVSYD*MGYNCQ
Trigger: TTGGCAGTTATACCCCATGCAGTCATAGGAGACTGC...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCCACTTGGGAACTGCCTaGTACTACGGGGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGHLGTA*YYGGWA
Trigger: TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGCACTTGGGAACTGCCTaGTACTACGGGGGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGHLGTA*YYGGWA
Trigger: TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGCCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGPPLGN*LLLRGL
Trigger: CAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGG...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAGATGTGCCATGCTTATaGAAGTACCACCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWADVPCL*KYHHSN
Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGCACATC...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTTCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFSPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCGGCGCCTGGGCCTTGTaGAGAGAGGTGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSGAWAL*REVPDT
Trigger: TGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCC...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATGGCGCCTGGGCCTTGTaGAGAGAGGTGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYGAWAL*REVPDT
Trigger: TGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCC...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAGGGACCCTGGGCGCCTaGGCCTTGTGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLGTLGA*ALWREV
Trigger: CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCC...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCACAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPAQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCGAGAAGGCACATGACTaGAGTACCTCAGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGEKAHD*STSAAQ
Trigger: CTGCGCAGCTGAGGTACTTCAGTCATGTGCCTTCTC...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAAGACGCTCCAACAGCTaGGGCTTCACCCACGCCGCC +
Preference number: 4 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLRRSNS*GFTHAA
Trigger: GGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCT...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CIPGQVGGTLGAWALWREINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: IPGQVGGTLGAWALWREVINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACCACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWARRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCTTCTGGATGTGCAAATaGAAGGCAAGCATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCFWMCK*KASILP
Trigger: TGGGAGAATGCTTGCCTTGCATTTGCACATCCAGAA...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGCCTTGTGGAGAGAGGTaGCAGACACAGAGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGPCGER*QTQSSP
Trigger: CGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGG...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFCFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGNPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWASYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCATAAGTTCGCAAGGCTaGTTCATGCCAGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPISSQG*FMPEIV
Trigger: CACTATCTCTGGCATGAACCAGCCTTGCGAACTTAT...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCATAAGTTCGCAAGGCTaGTTCATGCCAGAGATAGTG +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCISSQG*FMPEIV
Trigger: CACTATCTCTGGCATGAACCAGCCTTGCGAACTTAT...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATCCCCGACCCTCCACTTaGGAACTGCCTGCTACTACG +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYPRPST*ELPATT
Trigger: CGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGG...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACAGGTCGGTGGGACCCTaGGCGCCTGGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDRSVGP*APGPCG
Trigger: TCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp AAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTGGTGGGTGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: KVTLPTCRQLFG*GTRTPLVGGWG
Trigger: CCCCCAACCACCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGCAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: HLGTACYYGGWASLKQCWQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGGGAGCCAAAATGCGGTaGCTTGACTTCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: HLGTACYYGGWASLKQCWGAKMR*LDFNPN
Trigger: GTTGGGGTTGAAGTCAAGTCACCGCATTTTGGCTCC...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGGTTGCTACAGTGAATTaGGCTTTCTCAGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGVATVN*AFSEAI
Trigger: AATAGCTTCTGAGAAAGCTCAATTCACTGTAGCAAC...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTCACAGTTGCTACAGTaGATTGAGCTTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPSQLLQ*IELSQK
Trigger: CTTCTGAGAAAGCTCAATTCACTGTAGCAACTGTGA...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGHGPPS*RYRRRQ
Trigger: CTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTG...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGAGACGCTCCAACAGCTaGGGCTTCACCCACGCCGCC +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWRRSNS*GFTHAA
Trigger: GGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCT...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTAESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCATTCCTTTTCACTCTTTaGCCTCCCTGTCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPAFLFTL*PPCQPE
Trigger: CTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAA...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCAATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAACTTGGTGGAGGCCTCTaGCCCGACCCTCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKLGGGL*PDPPLG
Trigger: CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAG...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCGAGCCGCCCCCTGGGTaGAGAAATGAAATACGGGAG +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSEPPPG*RNEIRE
Trigger: CTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTC...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGCCTTGTGGAGAGAGGTaGCAGACACAGAGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLPCGER*QTQSSP
Trigger: CGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGG...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDEDAQG*GHQSPS
Trigger: GCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTC...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKEDAQG*GHQSPS
Trigger: GCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTC...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGGNSLV*GPELLW
Trigger: CCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCC...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCACCTGTAGCTCACACCTaGTTATTGATGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPAPVAHT*LLMALV
Trigger: CACCAAGGCCATCAATAACCAGGTGTGAGCTACAGG...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGCAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCGAACAAGCAGCAAAATaGGAACTTTATTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPEQAAK*ELYLVQ
Trigger: CTGCACCAAATAAAGTTCTCATTTTGCTGCTTGTTC...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCGAACAAGCAGCAAAATaGGAACTTTATTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCEQAAK*ELYLVQ
Trigger: CTGCACCAAATAAAGTTCTCATTTTGCTGCTTGTTC...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMHGPPS*RYRRRQ
Trigger: CTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTG...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTAGACGCTCCAACAGCTaGGGCTTCACCCACGCCGCC +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLRRSNS*GFTHAA
Trigger: GGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCT...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCATCCCTCCAAGCCTTCTaGATAACTGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPASLQAF*ITVSEG
Trigger: TCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGA...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCCACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGGCAGTCTCCTATGACTaGATGGGGTATAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVAVSYD*MGYNCQ
Trigger: TTGGCAGTTATACCCCATGCAGTCATAGGAGACTGC...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCCCTTGTGGAGAGAGGTaGCAGACACAGAGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HARDSEMCTLCAENDGAVPCGER*QTQSSP
Trigger: CGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGG...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGCTGAAGTACCTCAGCTaGGCAGCCTGTAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLLKYLS*AACSQF
Trigger: AAACTGGCTACAGGCTGCGCAGCTGAGGTACTTCAG...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGATGTGCCATGCTTATaGAAGTACCACCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFDVPCL*KYHHSN
Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGCACATC...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACGTAGAACATATGCAGTaGCACAGTCATTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: MALVEASAPTLHLGTACYVEHMQ*HSHCLI
Trigger: AATTAAACAATGACTGTGCCACTGCATATGTTCTAC...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGACTGCTCATGACCTGTaGTTGTTTTTAACTCTTAAC +
Preference number: 4 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVTAHDL*LFLTLN
Trigger: GTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCATGCTACTACGGGGGTTaGGCATCTTTGAAGCAATGT +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPACYYGG*ASLKQC
Trigger: ACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCA...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGGCGCCTGGGCCTTGTaGAGAGAGGTGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGGAWAL*REVPDT
Trigger: TGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCC...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTAATGAGAACTTTATTTaGTGCAGTCAGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFNENFI*CSQGSI
Trigger: AATGGAGCCCTGACTGCACCAAATAAAGTTCTCATT...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLRRTWF*NAALCS
Trigger: GGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAACTGATGGTCCTGAGCTaGCAGGTTCATGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTELMVLS*QVHVIV
Trigger: TACTATGACATGAACCTGTCAGCTCAGGACCATCAG...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAATTCTCCTCAAAGCCTaGGGATGCCCAGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRILLKA*GCPGLG
Trigger: CCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAAT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGAACATTGCCTGGCCCTaGGGGTCTGTTTGCAAAACT +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLNIAWP*GSVCKT
Trigger: AGTTTTGCAAACAGACCCTCAGGGCCAGGCAATGTT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTTACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: IYNKYLPLFSWVSTGRSEHGPPS*RYRRRQ
Trigger: CTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTG...CTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGNLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAATATCAGCCGTCTCTGTaGAGCTGGGATAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTEYQPSL*SWDKGK
Trigger: TTTACCCTTATCCCAGCTGCACAGAGACGGCTGATA...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358039.9
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPRRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCA +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGIQPSS*SQITAP
Trigger: TGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAAT...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTTTCTGAACACTCACTaGTTCATTTCTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTAFLNTH*FISIPP
Trigger: AGGAGGAATAGAAATGAAGCAGTGAGTGTTCAGAAA...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGTGTTCCTCCCATCAGTaGTTGCAAATGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVCSSHQ*LQMAYR
Trigger: TCTGTAAGCCATTTGCAACCACTGATGGGAGGAACA...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPSYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTASYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGTCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGSPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAGGACCAGAACTCCTCTaGTGGGTGGTTGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKGPELL*WVVGGR
Trigger: CCTTCCCCCAACCACCCACCAGAGGAGTTCTGGTCC...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACATCCTGGGCAGGTCGGTaGGACCCTGGGCGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTSWAGR*DPGRLG
Trigger: GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGA...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMENVMHS*AGRWDP
Trigger: AGGGTCCCACCGACCTGCCCAGGAATGCATCACATT...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHENVMHS*AGRWDP
Trigger: AGGGTCCCACCGACCTGCCCAGGAATGCATCACATT...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCTCCATTCCTTCCTGTTaGTACTCATTTCTTCTAACT +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCSIPSC*YSFLLT
Trigger: AGTTAGAAGAAATGAGTACCAACAGGAAGGAATGGA...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGGGAGCCAAAATGCGGTaGCTTGACTTCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMEGAKMR*LDFNPN
Trigger: GTTGGGGTTGAAGTCAAGTCACCGCATTTTGGCTCC...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAATCAAAGCAGAGTGGCTaGGACTGTATAAGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTESKQSG*DCISSQ
Trigger: TTGCGAACTTATACAGTCTCAGCCACTCTGCTTTGA...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGTTTAGAGAAGGCACATaGCTGAAGTACCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLFREGT*LKYLSC
Trigger: GCAGCTGAGGTACTTCAGTCATGTGCCTTCTCTAAA...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGCCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: HLGTACYYGGWASLKQCWPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGTATCAGCCGTCTCTGTaGAGCTGGGATAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLYQPSL*SWDKGK
Trigger: TTTACCCTTATCCCAGCTGCACAGAGACGGCTGATA...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358039.9
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTTCCTTTTCACTCTTTaGCCTCCCTGTCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSFLFTL*PPCQPE
Trigger: CTCAGGCTGACAGGGAGGGCAAAGAGTGAAAAGGAA...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGCCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGPPLGN*LLLRGL
Trigger: CAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGG...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACGAGCCGCCCCCTGGGTaGAGAAATGAAATACGGGAG +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDEPPPG*RNEIRE
Trigger: CTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTC...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCTGAAGTACCTCAGCTaGGCAGCCTGTAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMELKYLS*AACSQF
Trigger: AAACTGGCTACAGGCTGCGCAGCTGAGGTACTTCAG...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATTGCCCTTTGGCTCTTaGCCCCGACATCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKLPFGS*PRHLSW
Trigger: CCAGGAGAGATGTCGGGGGCAAGAGCCAAAGGGCAA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS-3UTR CCA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCGTAGAACATATGCAGTaGCACAGTCATTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: LLMALVEASAPTLHLGTAVEHMQ*HSHCLI
Trigger: AATTAAACAATGACTGTGCCACTGCATATGTTCTAC...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAAAAAACTGGAGAGCTTTaGATTCCAGGGATGATCTCC +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTEKTGEL*IPGMIS
Trigger: GGAGATCATCCCTGGAATCCAAAGCTCTCCAGTTTT...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGTGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEGNSLV*GPELLW
Trigger: CCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCC...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGGGACCCTGGGCGCCTaGGCCTTGTGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAAGTLGA*ALWREV
Trigger: CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCC...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLEAQAS*GEGRTP
Trigger: TGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTC...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp TCTACAAAGTCACATTACCAACCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTCCTCTGGTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: STKSHYQPAGNS*VWGPELLWWVV
Trigger: AACCACCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp GACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTaGGGCATCTTTGAAGCAATGTTGGATAACAAGAAA +
Preference number: 4 (lower is better)
Translates to: DPPLGNCLLLRG*GIFEAMLDNKK
Trigger: TTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGACAAAATGCGGTGACTTaGCTTCAACCCCAACAGCCC +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRQNAVT*LQPQQP
Trigger: GGGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTG...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGTCACAGTTGCTACAGTaGATTGAGCTTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGSQLLQ*IELSQK
Trigger: CTTCTGAGAAAGCTCAATTCACTGTAGCAACTGTGA...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAATCACAGTTGCTACAGTaGATTGAGCTTTCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTESQLLQ*IELSQK
Trigger: CTTCTGAGAAAGCTCAATTCACTGTAGCAACTGTGA...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCAGGAGAGATCAGTGGTaGAGAATTACCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGRRDQW*RITIKA
Trigger: TGCTTTGATGGTAATTCTTCACCACTGATCTCTCCT...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACGAGAAGGCACATGACTaGAGTACCTCAGCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDEKAHD*STSAAQ
Trigger: CTGCGCAGCTGAGGTACTTCAGTCATGTGCCTTCTC...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAAHGPPS*RYRRRQ
Trigger: CTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTG...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATCTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYLVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCCCAAAGGAGCCAAAATaGGGTGACTTGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSPKEPK*GDLTST
Trigger: GGTTGAAGTCAAGTCACCGCATTTTGGCTCCTTTGG...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATGCAGTCTCCTATGACTaGATGGGGTATAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYAVSYD*MGYNCQ
Trigger: TTGGCAGTTATACCCCATGCAGTCATAGGAGACTGC...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGRDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: HARDSEMCTLCAENDGAVELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCGAACTTCTCTCAGGCTaGATAGGAGTTCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSELLSG*IGVLLI
Trigger: GATGAGCAGAACTCCTATGCAGCCTGAGAGAAGTTC...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTACCTCCACTTGGGAACTaGCTGCTACTACGGGGGTTG +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLPPLGN*LLLRGL
Trigger: CAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGG...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTCTTGGTGGAGGCCTCTaGCCCGACCCTCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAALGGGL*PDPPLG
Trigger: CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAG...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAGAGCCGCCCCCTGGGTaGAGAAATGAAATACGGGAG +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLEPPPG*RNEIRE
Trigger: CTCCCGTATTTCATTTCTGCACCCAGGGGGCGGCTC...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTCTCCGTAAGCAATCCTaGAGAGCCGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CKSKNASLNLALQIKANFLRKQS*RAAPWV
Trigger: CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAG...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGCCTTGTGGAGAGAGGTaGCAGACACAGAGTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWPCGER*QTQSSP
Trigger: CGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGG...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGCAACCAGTAAGTCTTTaGCAAATTCTCAGACCCACT +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGQPVSL*QILRPT
Trigger: AGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTG...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGCTACCGAGAATCTCTTaGCCTTTGGCTCTTGCCCCC +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWLPRIS*PLALAP
Trigger: GGGGGCAAGAGCCAAAGGGCAAGAGATTCTCGGTAG...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS-3UTR CCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCATGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSACFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSSPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGACTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRLQATL*FGDQNS
Trigger: GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAG...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAGGGACCCTGGGCGCCTaGGCCTTGTGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTGTLGA*ALWREV
Trigger: CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCC...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAAATGTGATGCATTCCTaGGCAGGTCGGTGGGACCCT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKNVMHS*AGRWDP
Trigger: AGGGTCCCACCGACCTGCCCAGGAATGCATCACATT...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATTATGTTTCTCATCCCTaGGAGGCATTCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYYVSHP*EAFSLA
Trigger: AGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATA...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAACACGAGTCTCTACATaGCTTAACAGAAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPATRVST*LNRREI
Trigger: TATCTCTCTTCTGTTAAGCCATGTAGAGACTCGTGT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAAATGAGAACTTTATTTaGTGCAGTCAGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPANENFI*CSQGSI
Trigger: AATGGAGCCCTGACTGCACCAAATAAAGTTCTCATT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGCTGATGGTCCTGAGCTaGCAGGTTCATGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVLMVLS*QVHVIV
Trigger: TACTATGACATGAACCTGTCAGCTCAGGACCATCAG...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGGTTGCTACAGTGAATTaGGCTTTCTCAGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGVATVN*AFSEAI
Trigger: AATAGCTTCTGAGAAAGCTCAATTCACTGTAGCAAC...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGHQRTM*CIPGQV
Trigger: GACCTGCCCAGGAATGCATCACATTGTTCTCTGGTG...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAGACGCTCCAACAGCTaGGGCTTCACCCACGCCGCC +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTRRSNS*GFTHAA
Trigger: GGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGCGTCT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGCTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHELVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGCTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVLVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHENLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTCCCTCCAAGCCTTCTaGATAACTGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVSLQAF*ITVSEG
Trigger: TCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGA...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPARRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSCFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HARDSEMCTLCAENDGAVCFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGTATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAAGCTATTATTTTCTTTaGGTGATTGGCAGGTATAGG +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPASYYFL*VIGRYR
Trigger: CCTATACCTGCCAATCACCCAAAGAAAATAATAGCT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGGCAACTCTTTGGTTTaGGGACCAGAACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGGNSLV*GPELLW
Trigger: CCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCC...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGCTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGLQATL*FGDQNS
Trigger: GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAG...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGTATGTTTCTCATCCCTaGGAGGCATTCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEYVSHP*EAFSLA
Trigger: AGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATA...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTACTGATGGTCCTGAGCTaGCAGGTTCATGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLLMVLS*QVHVIV
Trigger: TACTATGACATGAACCTGTCAGCTCAGGACCATCAG...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGACTGATGGTCCTGAGCTaGCAGGTTCATGTCATAGTA +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRLMVLS*QVHVIV
Trigger: TACTATGACATGAACCTGTCAGCTCAGGACCATCAG...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTGGAGCCAAAATGCGGTaGCTTGACTTCAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIGAKMR*LDFNPN
Trigger: GTTGGGGTTGAAGTCAAGTCACCGCATTTTGGCTCC...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGCTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHELTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGAGAGGTCCCTGTAAGTaGCACATAGAATTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMERGPCK*HIEFGC
Trigger: ACACCCAAATTCTATGTGGCACTTACAGGGACCTCT...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: HLGTACYYGGWASLKQCWIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTTATCAGCCGTCTCTGTaGAGCTGGGATAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: FHCSAGLAQADQRWFLVCYQPSL*SWDKGK
Trigger: TTTACCCTTATCCCAGCTGCACAGAGACGGCTGATA...ACACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYRDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPAITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCA +
Preference number: 4 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVIQPSS*SQITAP
Trigger: TGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAAT...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAATTCAGCCTAGCTCCTaGAGCCAAATTACAGCACCA +
Preference number: 4 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLIQPSS*SQITAP
Trigger: TGGTGCTGTAATTTGGCTGCAGGAGCTAGGCTGAAT...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAATTTCTGAACACTCACTaGTTCATTTCTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTEFLNTH*FISIPP
Trigger: AGGAGGAATAGAAATGAAGCAGTGAGTGTTCAGAAA...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGTAGAACATATGCAGTaGCACAGTCATTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: WALWREVPDTEFSVSNPAVEHMQ*HSHCLI
Trigger: AATTAAACAATGACTGTGCCACTGCATATGTTCTAC...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTCTTCCATTGTTCAGCTaGGTTAGCACAGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: FHCSAGLAQADQRWFLVCLPLFS*VSTGRS
Trigger: TGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG...ACACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMETGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGATCTCCTATGACTGCATaGGGTATAACTGCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRSPMTA*GITAKP
Trigger: AGGCTTGGCAGTTATACCCCATGCAGTCATAGGAGA...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGGAAGCTCAAGCTAGCTaGGGCGAAGGGAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLEAQAS*GEGRTP
Trigger: TGGCGTCCTCCCTTCGCCCCAGCTAGCTTGAGCTTC...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGACACGAGTCTCTACATaGCTTAACAGAAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLTRVST*LNRREI
Trigger: TATCTCTCTTCTGTTAAGCCATGTAGAGACTCGTGT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp TTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACAAGAAAGAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: LGTACYYGGWAS*KQCWITRKRCF
Trigger: GAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMRRTWF*NAALCS
Trigger: GGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCT...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSRRTWF*NAALCS
Trigger: GGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCT...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAACAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGCAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATATTATTTTCTTTGGGTaGTTGGCAGGTATAGGGCAA +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYIIFFG*LAGIGQ
Trigger: TTGCCCTATACCTGCCAATCACCCAAAGAAAATAAT...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCGAACAAGCAGCAAAATaGGAACTTTATTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSEQAAK*ELYLVQ
Trigger: CTGCACCAAATAAAGTTCTCATTTTGCTGCTTGTTC...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAACTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKLVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWNLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKNLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTACCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGACCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATATCAGCCGTCTCTGTaGAGCTGGGATAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKYQPSL*SWDKGK
Trigger: TTTACCCTTATCCCAGCTGCACAGAGACGGCTGATA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: HARDSEMCTLCAENDGAVENGYH*CRRAKS
Trigger: GGATTTTGCTCTTCTACAGCAATGATAGCCATTCTC...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: QSHITNLQATLWFGDQNSENGYH*CRRAKS
Trigger: GGATTTTGCTCTTCTACAGCAATGATAGCCATTCTC...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGCAACCAGTAAGTCTTTaGCAAATTCTCAGACCCACT +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEQPVSL*QILRPT
Trigger: AGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTG...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHEVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVNPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCTTTTTAACTCTTAACTaGGTTAGAAAACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGFLTLN*VRKLES
Trigger: GCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAA...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAATTTTTAACTCTTAACTaGGTTAGAAAACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTEFLTLN*VRKLES
Trigger: GCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAA...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTCCTGTAGCTCACACCTaGTTATTGATGGCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIPVAHT*LLMALV
Trigger: CACCAAGGCCATCAATAACCAGGTGTGAGCTACAGG...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp TCACTTCCCTTATCAAGAACACCAACCAGTAAGTCTTaGCCAAATTCTCAGACCCACTCAGGACACGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLPLSRTPTSKS*PNSQTHSGHES
Trigger: AGACTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATAAGGGAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: FHCSAGLAQADQRWFLVCVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...ACACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTCAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTACAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGCAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAGGCTTATATTATCTCTaGGCATCTCGGTGGCTATTC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKGLYYL*ASRWLF
Trigger: GAATAGCCACCGAGATGCTCAGAGATAATATAAGCC...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGTCAAAGCAGAGTGGCTaGGACTGTATAAGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGSKQSG*DCISSQ
Trigger: TTGCGAACTTATACAGTCTCAGCCACTCTGCTTTGA...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAGGAGAGATCAGTGGTaGAGAATTACCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRRRDQW*RITIKA
Trigger: TGCTTTGATGGTAATTCTTCACCACTGATCTCTCCT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CKSKNASLNLALQIKANFHQRTM*CIPGQV
Trigger: GACCTGCCCAGGAATGCATCACATTGTTCTCTGGTG...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATCACCCAAGTGTATCTaGCAAATTCTGTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKSPKCI*QILSAG
Trigger: ACCAGCAGACAGAATTTGTCAGATACACTTGGGTGA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACAAATACAGTCACCGCTaGCAAATTCTCACACAGCCT +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDKYSHR*QILTQP
Trigger: AGGCTGTGTGAGAATTTGGCAGCGGTGACTGTATTT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACAGAGGTCCCTGTAAGTaGCACATAGAATTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDRGPCK*HIEFGC
Trigger: ACACCCAAATTCTATGTGGCACTTACAGGGACCTCT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGAGAGGTCCCTGTAAGTaGCACATAGAATTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWRGPCK*HIEFGC
Trigger: ACACCCAAATTCTATGTGGCACTTACAGGGACCTCT...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAAGAGGTCCCTGTAAGTaGCACATAGAATTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKRGPCK*HIEFGC
Trigger: ACACCCAAATTCTATGTGGCACTTACAGGGACCTCT...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGCTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMLVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTACTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLLVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKINLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTCCCTCCAAGCCTTCTaGATAACTGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKISLQAF*ITVSEG
Trigger: TCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGA...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTTCCCTCCAAGCCTTCTaGATAACTGTGTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLSLQAF*ITVSEG
Trigger: TCCTTCAGACACAGTTATGCAGAAGGCTTGGAGGGA...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGCCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTTATCAGCCGTCTCTGTaGAGCTGGGATAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLYQPSL*SWDKGK
Trigger: TTTACCCTTATCCCAGCTGCACAGAGACGGCTGATA...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTATCAGCCGTCTCTGTaGAGCTGGGATAAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIYQPSL*SWDKGK
Trigger: TTTACCCTTATCCCAGCTGCACAGAGACGGCTGATA...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTCCAAAGGAGCCAAAATaGGGTGACTTGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIPKEPK*GDLTST
Trigger: GGTTGAAGTCAAGTCACCGCATTTTGGCTCCTTTGG...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAGCAGTCTCCTATGACTaGATGGGGTATAACTGCCAA +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLAVSYD*MGYNCQ
Trigger: TTGGCAGTTATACCCCATGCAGTCATAGGAGACTGC...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRRDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGTGTTCCTCCCATCAGTaGTTGCAAATGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWCSSHQ*LQMAYR
Trigger: TCTGTAAGCCATTTGCAACCACTGATGGGAGGAACA...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGTGTTCCTCCCATCAGTaGTTGCAAATGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGCSSHQ*LQMAYR
Trigger: TCTGTAAGCCATTTGCAACCACTGATGGGAGGAACA...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWCFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTCTTCCATTGTTCAGCTaGGTTAGCACAGGCAGATCA +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLLPLFS*VSTGRS
Trigger: TGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGTTTTTAACTCTTAACTaGGTTAGAAAACTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLFLTLN*VRKLES
Trigger: GCTCTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAA...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVTIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp CTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTaGGATAACAAGAAAGAGATGCTTCCTTTTCACTCT +
Preference number: 4 (lower is better)
Translates to: LLLRGLGIFEAM*DNKKEMLPFHS
Trigger: AGAGTGAAAAGGAAGCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGTGGAGAGAATTTTTCTaGAACAGTCCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMEWREFF*NSPCLQ
Trigger: TTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCA...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGAGGAGAGATCAGTGGTaGAGAATTACCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWRRDQW*RITIKA
Trigger: TGCTTTGATGGTAATTCTTCACCACTGATCTCTCCT...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGCACCAGAGAACAATGTaGTGCATTCCTGGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLHQRTM*CIPGQV
Trigger: GACCTGCCCAGGAATGCATCACATTGTTCTCTGGTG...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAAAATACAGTCACCGCTaGCAAATTCTCACACAGCCT +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLKYSHR*QILTQP
Trigger: AGGCTGTGTGAGAATTTGGCAGCGGTGACTGTATTT...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGAGAGGTCCCTGTAAGTaGCACATAGAATTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMRGPCK*HIEFGC
Trigger: ACACCCAAATTCTATGTGGCACTTACAGGGACCTCT...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343210.11
CDS-3UTR GCA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp ATTTACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: IYNKYLPLFSWVSTGRSENLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...CTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGCCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTACCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTCCTTGTCTTCAACAGTaGTGCTGTGTAACAGATTGC +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLPCLQQ*CCVTDC
Trigger: GCAATCTGTTACACAGCAGCACTGTTGAAGACAAGG...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTCACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: FHCSAGLAQADQRWFLVCHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...ACACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: FHCSAGLAQADQRWFLVCENGYH*CRRAKS
Trigger: GGATTTTGCTCTTCTACAGCAATGATAGCCATTCTC...ACACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGAGAGATAGTGAGATGTaGACCCTATGTGCTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWRDSEM*TLCAEN
Trigger: ATTCTCAGCACATAGGGTGCACATCTCACTATCTCT...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACCAACCAGTAAGTCTTTaGCAAATTCTCAGACCCACT +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDQPVSL*QILRPT
Trigger: AGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTG...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGCAACCAGTAAGTCTTTaGCAAATTCTCAGACCCACT +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWQPVSL*QILRPT
Trigger: AGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTG...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTTGTTCCTCCCATCAGTaGTTGCAAATGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLCSSHQ*LQMAYR
Trigger: TCTGTAAGCCATTTGCAACCACTGATGGGAGGAACA...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMCFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWNPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKITGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDTIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATTCTTTGAAGCAATGTTaGATAACAAGAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYSLKQC*ITRKRC
Trigger: GCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGA...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAAATGAGAACTTTATTTaGTGCAGTCAGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVNENFI*CSQGSI
Trigger: AATGGAGCCCTGACTGCACCAAATAAAGTTCTCATT...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAAATGAGAACTTTATTTaGTGCAGTCAGGGCTCCATT +
Preference number: 4 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLNENFI*CSQGSI
Trigger: AATGGAGCCCTGACTGCACCAAATAAAGTTCTCATT...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
3UTR CAA 72 bp GGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGGGTTAGAAAACTGGAG +
Preference number: 4 (lower is better)
Translates to: GITAKPTAHDLW*FLTLNWVRKLE
Trigger: CTCCAGTTTTCTAACCCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTATGGAGAGAATTTTTCTaGAACAGTCCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVWREFF*NSPCLQ
Trigger: TTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCA...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAGTTGCTACAGTGAATTaGGCTTTCTCAGAAGCTATT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKVATVN*AFSEAI
Trigger: AATAGCTTCTGAGAAAGCTCAATTCACTGTAGCAAC...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ATTTACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGAAATACAGTCACCGCTaGCAAATTCTCACACAGCCT +
Preference number: 4 (lower is better)
Translates to: IYNKYLPLFSWVSTGRSEKYSHR*QILTQP
Trigger: AGGCTGTGTGAGAATTTGGCAGCGGTGACTGTATTT...CTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343210.11
CDS-3UTR GCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: CKSKNASLNLALQIKANFNLVLK*CSLFLP
Trigger: TGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAACACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGCACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAGAAAGCATAGGCAATTaGTTCACTATCACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLESIGN*FTITPF
Trigger: AAACGGGGTGATAGTGAAGCAATTGCCTATGCTTTC...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGTAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: FHCSAGLAQADQRWFLVCRRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...ACACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp AGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACACGAGCTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: RTPTSKSLPNSQTHSGHELSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...CTCGTGTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMELSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGATGTGCCATGCTTATaGAAGTACCACCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCDVPCL*KYHHSN
Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGCACATC...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp ATTTACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGTGCTTTGATTCGAGCTaGAGGATTTCTTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: IYNKYLPLFSWVSTGRSECFDSS*RISFPP
Trigger: TGGAGGGAAAGAAATCCTCCAGCTCGAATCAAAGCA...CTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTATATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGATATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMNPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTAATCCTGCTGTGAAATaGATGAACAAAGGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKINPAVK*MNKGSS
Trigger: GGAGCTTCCTTTGTTCATCCATTTCACAGCAGGATT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGCAGGCAGATCAGAGATaGTTTCTTGTGTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWQADQR*FLVCFT
Trigger: TGTAAAACACACAAGAAACCATCTCTGATCTGCCTG...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKITIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACACTGCAGGCAACTCTTTaGTTTGGGGACCAGAACTCC +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTLQATL*FGDQNS
Trigger: GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAG...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTRRTWF*NAALCS
Trigger: GGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGTGGAGAGAATTTTTCTaGAACAGTCCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWWREFF*NSPCLQ
Trigger: TTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCA...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGCAGGAAACTGGTGAGTaGGAATGGCTATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLQETGE*EWLSLL
Trigger: CAGCAATGATAGCCATTCTCACTCACCAGTTTCCTG...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGATCTACACAAGTCCTTaGGATCATACTTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWIYTSP*DHTYSF
Trigger: AAAGCTGTAAGTATGATCTCAAGGACTTGTGTAGAT...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTCACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTCACAGCTCTATGAATTaGTTCCACGGCATTAATTTC +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIHSSMN*FHGINF
Trigger: GAAATTAATGCCGTGGAAGCAATTCATAGAGCTGTG...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLENGYH*CRRAKS
Trigger: GGATTTTGCTCTTCTACAGCAATGATAGCCATTCTC...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCC +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIENGYH*CRRAKS
Trigger: GGATTTTGCTCTTCTACAGCAATGATAGCCATTCTC...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGACTGTCACTTTACAGATaGTGTTCAGAAAAATTTGGT +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRLSLYR*CSEKFG
Trigger: ACCAAATTTTTCTGAACAGCATCTGTAAAGTGACAG...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATTTCTGAACACTCACTaGTTCATTTCTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKFLNTH*FISIPP
Trigger: AGGAGGAATAGAAATGAAGCAGTGAGTGTTCAGAAA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGATGTGCCATGCTTATaGAAGTACCACCATTCAAAT +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLDVPCL*KYHHSN
Trigger: ATTTGAATGGTGGTACTTCCATAAGCATGGCACATC...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTAGTAGAACATATGCAGTaGCACAGTCATTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVVEHMQ*HSHCLI
Trigger: AATTAAACAATGACTGTGCCACTGCATATGTTCTAC...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTTATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTCAGGCAGATCAGAGATaGTTTCTTGTGTGTTTTACA +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSQADQR*FLVCFT
Trigger: TGTAAAACACACAAGAAACCATCTCTGATCTGCCTG...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAACTGCTCATGACCTGTaGTTGTTTTTAACTCTTAAC +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKTAHDL*LFLTLN
Trigger: GTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGATCTTTGAAGCAATGTTaGATAACAAGAAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRSLKQC*ITRKRC
Trigger: GCATCTCTTTCTTGTTATCCAACATTGCTTCAAAGA...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAACACGAGTCTCTACATaGCTTAACAGAAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLTRVST*LNRREI
Trigger: TATCTCTCTTCTGTTAAGCCATGTAGAGACTCGTGT...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACTCCATTCCTTCCTGTTaGTACTCATTTCTTCTAACT +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDSIPSC*YSFLLT
Trigger: AGTTAGAAGAAATGAGTACCAACAGGAAGGAATGGA...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTTGGAGAGAATTTTTCTaGAACAGTCCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLWREFF*NSPCLQ
Trigger: TTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCA...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGTGGAGAGAATTTTTCTaGAACAGTCCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMWREFF*NSPCLQ
Trigger: TTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCA...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTATCTACACAAGTCCTTaGGATCATACTTACAGCTTT +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSIYTSP*DHTYSF
Trigger: AAAGCTGTAAGTATGATCTCAAGGACTTGTGTAGAT...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGCTCACTTCCATTCTATaGGTATATCGATGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLLTSIL*VYRWSS
Trigger: GCTGCTCCATCGATATACTCATAGAATGGAAGTGAG...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGTCAAAGCAGAGTGGCTaGGACTGTATAAGTTCGCAA +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLSKQSG*DCISSQ
Trigger: TTGCGAACTTATACAGTCTCAGCCACTCTGCTTTGA...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTATAAAAGATGTGCCATaGTTATGGAAGTACCACCAT +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIIKDVP*LWKYHH
Trigger: ATGGTGGTACTTCCATAAGCATGGCACATCTTTTAT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACACTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCA +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTLVLKC*SLFLPS
Trigger: TGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAG...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLRRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSRRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR GCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTAGAAGAGCAAAATCCTaGTGTGAAATGGATGAACAA +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIRRAKS*CEMDEQ
Trigger: TTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR GCA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTATTTCTGAACACTCACTaGTTCATTTCTATTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SHSWLILSLSISVAIPHLFLNTH*FISIPP
Trigger: AGGAGGAATAGAAATGAAGCAGTGAGTGTTCAGAAA...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGTGTTCCTCCCATCAGTaGTTGCAAATGGCTTACAGA +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLCSSHQ*LQMAYR
Trigger: TCTGTAAGCCATTTGCAACCACTGATGGGAGGAACA...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGGTAGAACATATGCAGTaGCACAGTCATTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWVEHMQ*HSHCLI
Trigger: AATTAAACAATGACTGTGCCACTGCATATGTTCTAC...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGGTAGAACATATGCAGTaGCACAGTCATTGTTTAATT +
Preference number: 4 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWVEHMQ*HSHCLI
Trigger: AATTAAACAATGACTGTGCCACTGCATATGTTCTAC...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CCA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGTATATACCAGTACATTaGTATCTCTCCTCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMYIPVH*YLSSVE
Trigger: CTCAACTGAGGAGAGATACCAATGTACTGGTATATA...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTACTGGGTTAGAAAACTaGAGAGCTTTGGATTCCAGG +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAATGLEN*RALDSR
Trigger: CCTGGAATCCAAAGCTCTCCAGTTTTCTAACCCAGT...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTACCATCAAAGCAGAGTaGCTGAGACTGTATAAGTTC +
Preference number: 4 (lower is better)
Translates to: CKSKNASLNLALQIKANFTIKAE*LRLYKF
Trigger: GAACTTATACAGTCTCAGCCACTCTGCTTTGATGGT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACATATGTTTCTCATCCCTaGGAGGCATTCAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTYVSHP*EAFSLA
Trigger: AGCTAGGCTGAATGCCTCCCAGGGATGAGAAACATA...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTCCATTCCTTCCTGTTaGTACTCATTTCTTCTAACT +
Preference number: 4 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKISIPSC*YSFLLT
Trigger: AGTTAGAAGAAATGAGTACCAACAGGAAGGAATGGA...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATC +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAAVTDCC*LWKAYI
Trigger: GATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTAC...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAAATACAGTCACCGCTaGCAAATTCTCACACAGCCT +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTKYSHR*QILTQP
Trigger: AGGCTGTGTGAGAATTTGGCAGCGGTGACTGTATTT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTATAAATTGTTTCTCCTaGCTTGAGTGCCTGTTTAAA +
Preference number: 4 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSINCFS*LECLFK
Trigger: TTTAAACAGGCACTCAAGGCAGGAGAAACAATTTAT...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR TCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAGGAGAGATCAGTGGTaGAGAATTACCATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTRRDQW*RITIKA
Trigger: TGCTTTGATGGTAATTCTTCACCACTGATCTCTCCT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGGAACAAGCAGCAAAATaGGAACTTTATTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLEQAAK*ELYLVQ
Trigger: CTGCACCAAATAAAGTTCTCATTTTGCTGCTTGTTC...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAGTCATAGTATGTAAGTaGCTCTTTACCAGTCACCCA +
Preference number: 4 (lower is better)
Translates to: STSKRIPIGSGFNQGISTVIVCK*LFTSHP
Trigger: TGGGTGACTGGTAAAGAGCCACTTACATACTATGAC...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGACACGAGTCTCTACATaGCTTAACAGAAGAGAGATA +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLTRVST*LNRREI
Trigger: TATCTCTCTTCTGTTAAGCCATGTAGAGACTCGTGT...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR TCA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGTGGAGAGAATTTTTCTaGAACAGTCCTTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLWREFF*NSPCLQ
Trigger: TTGAAGACAAGGACTGTTTCAGAAAAATTCTCTCCA...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTACTGCTCATGACCTGTaGTTGTTTTTAACTCTTAAC +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAATAHDL*LFLTLN
Trigger: GTTAAGAGTTAAAAACAACCACAGGTCATGAGCAGT...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR GCA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTATAACAAGAAAGAGATaGTTCCTTTTCACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAAITRKR*FLFTLC
Trigger: GCAAAGAGTGAAAAGGAAGCATCTCTTTCTTGTTAT...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS TCA 90 bp CGGGCGCGGGCGCTGGCGTTAGGAGACGTCACTCCCGCGCATAACTaGCATGGGGCCCTCTTGGTCGGCGTTTCCGGGCGGGTCCTTCCG +
Preference number: 5 (lower is better)
Translates to: RARALALGDVTPAHN*HGALLVGVSGRVLP
Trigger: CGGAAGGACCCGCCCGGAAACGCCGACCAAGAGGGCCCCATGTCAGTTATGCGCGGGAGTGACGTCTCCTAACGCCAGCGCCCGCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467335.5
ENST00000490715.5
ENST00000492274.1
CDS GCA 90 bp CTCCAACAGCTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAGGAGCTGGGAGGGGAGAAGGACAGG +
Preference number: 5 (lower is better)
Translates to: LQQLRLHPRRHGPPS*RYRRRQELGGEKDR
Trigger: CCTGTCCTTCTCCCCTCCCAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343210.11
ENST00000360743.8
ENST00000369666.5
ENST00000490067.5
CDS-3UTR CAA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: IPGQVGGTLGAWALWREVWLLMA*VEASAP
Trigger: CGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCA...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS GCA 90 bp CTCCAACAGCTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAGGAGCTAAGGCAAACCCTACTTCCT +
Preference number: 5 (lower is better)
Translates to: LQQLRLHPRRHGPPS*RYRRRQELRQTLLP
Trigger: AGGAAGTAGGGTTTGCCTTAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467335.5
ENST00000490715.5
CDS-3UTR CAA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGGCCCCGACCCTCCACTaGGGAACTGCCTGCTACTAC +
Preference number: 5 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGAPTLH*GTACYY
Trigger: GTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGC...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: IPGQVGGTLGAWALWREVGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...CACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACAGAAAAGAGAGGGCGTaGACAAACTCATTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: GQVGGTLGAWALWREVPDRKERA*TNSFSH
Trigger: GTGGGAAAATGAGTTTGTCAACGCCCTCTCTTTTCT...GTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCACTGCTACTACGGGGGTaGGGCATCTTTGAAGCAATG +
Preference number: 5 (lower is better)
Translates to: ASAPTLHLGTACYYGGWALLLRG*GIFEAM
Trigger: CATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAG...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS CCA 90 bp CCGGGACCGAGAAGATTTCGAAGGTGGAGGAGCGTGTCTCAAGATTaGGGCTACCTGTTCTTTCGTGGGGCAGGGAAGGGGCGGACAGCA +
Preference number: 5 (lower is better)
Translates to: PGPRRFRRWRSVSQD*GYLFFRGAGKGRTA
Trigger: TGCTGTCCGCCCCTTCCCTGCCCCACGAAAGAACAGGTAGCCCCAATCTTGAGACACGCTCCTCCACCTTCGAAATCTTCTCGGTCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS-3UTR CAA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: HLGTACYYGGWASLKQCWPRSAI*PLSQAP
Trigger: TGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGG...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGCCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTC +
Preference number: 5 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGPAGNS*VWGPEL
Trigger: GAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGG...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGCCAACCAGTAAGTCTTaGCCAAATTCTCAGACCCAC +
Preference number: 5 (lower is better)
Translates to: CIPGQVGGTLGAWALWREPTSKS*PNSQTH
Trigger: GTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGG...CTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS CCA 90 bp AAGGTGGAGGAGCGTGTCTCAAGATTGGGGCTACCTGTTCTTTCGTaGGGCAGGGAAGGGGCGGACAGCAGCGCCTATTCTGGAGGAACT +
Preference number: 5 (lower is better)
Translates to: KVEERVSRLGLPVLS*GREGADSSAYSGGT
Trigger: AGTTCCTCCAGAATAGGCGCTGCTGTCCGCCCCTTCCCTGCCCCACGAAAGAACAGGTAGCCCCAATCTTGAGACACGCTCCTCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS-3UTR CAA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCCCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTC +
Preference number: 5 (lower is better)
Translates to: LLMALVEASAPTLHLGTAPAGNS*VWGPEL
Trigger: GAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGG...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTAAACAAAAACAAACATaGCCTGGCCCTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSKQKQT*PGPEGL
Trigger: CAGACCCTCAGGGCCAGGCAATGTTTGTTTTTGTTT...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GAGAACAATGTGATGCATTCCTGGGCAGGTCGGTGGGACCCTGGGCGCCTGGGCGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACA +
Preference number: 5 (lower is better)
Translates to: ENNVMHSWAGRWDPGRLGGGWAS*KQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC...GCCCAGGCGCCCAGGGTCCCACCGACCTGCCCAGGAATGCATCACATTGTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCTGGGTGCCAGCCCTCTTCTATTaGATAGAGGTCTGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: GARHRVLRKQSCRAAPWVPALFY*IEVCPS
Trigger: TGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGG...CACCCAGGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVPRSAI*PLSQAP
Trigger: TGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGG...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGTCCTCCCATCAGTGGTaGCAAATGGCTTACAGATAC +
Preference number: 5 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGSSHQW*QMAYRY
Trigger: GTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: HLGTACYYGGWASLKQCWWLLMA*VEASAP
Trigger: CGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCA...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCCCAGCCCTCTTCTATTaGATAGAGGTCTGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: LLMALVEASAPTLHLGTAPALFY*IEVCPS
Trigger: TGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGG...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS TCA 90 bp AGGGGCGGACAGCAGCGCCTATTCTGGAGGAACTGGACTGAGATGTaGCCCCGAAGTGTTACCGCTTCCAAACGAAATGAGGGTCACCTT +
Preference number: 5 (lower is better)
Translates to: RGGQQRLFWRNWTEM*PRSVTASKRNEGHL
Trigger: AAGGTGACCCTCATTTCGTTTGGAAGCGGTAACACTTCGGGGTCACATCTCAGTCCAGTTCCTCCAGAATAGGCGCTGCTGTCCGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS-3UTR CAA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTCCTCCCATCAGTGGTaGCAAATGGCTTACAGATAC +
Preference number: 5 (lower is better)
Translates to: LLMALVEASAPTLHLGTASSHQW*QMAYRY
Trigger: GTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCAAACAAAAACAAACATaGCCTGGCCCTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VIDGLGGGLCPDPPLGNCKQKQT*PGPEGL
Trigger: CAGACCCTCAGGGCCAGGCAATGTTTGTTTTTGTTT...GCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAACCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKPRSAI*PLSQAP
Trigger: TGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGG...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWPRSAI*PLSQAP
Trigger: TGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGG...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp GCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: ASAPTLHLGTACYYGGWAFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...TGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TCGGTGGGACCCTGGGCGCCTGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: SVGPWAPGPCGERCQTQSFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...ACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCAGGCGCCCAGGGTCCCACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: CPDPPLGNCLLLRGLGIFRKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...AAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCAGAAAAGAGAGGGCGTaGACAAACTCATTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: LLMALVEASAPTLHLGTARKERA*TNSFSH
Trigger: GTGGGAAAATGAGTTTGTCAACGCCCTCTCTTTTCT...GGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGGCCCCGACCCTCCACTaGGGAACTGCCTGCTACTAC +
Preference number: 5 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMEAPTLH*GTACYY
Trigger: GTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGC...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: QSHITNLQATLWFGDQNSWLLMA*VEASAP
Trigger: CGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCA...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCTGGTTATTGATGGCCTaGGTGGAGGCCTCTGCCCCG +
Preference number: 5 (lower is better)
Translates to: HARDSEMCTLCAENDGAVWLLMA*VEASAP
Trigger: CGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCA...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS TCA 90 bp GGCTGGGAAGTCTATGACCAAGGTACCAACAAATTTGGTGTCTGGTaGGGGTCTGCTTTCTGGTTCACAGACGGCGCCTTCTCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GWEVYDQGTNKFGVW*GSAFWFTDGAFSWC
Trigger: ACACCACGAGAAGGCGCCGTCTGTGAACCAGAAAGCAGACCCTCACCAGACACCAAATTTGTTGGTACCTTGGTCATAGACTTCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000498383.5
CDS-3UTR CAA 90 bp ATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAACTGCCTGCTACTTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: MALVEASAPTLHLGTACYFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...GTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CACCTGGTTATTGATGGCCTTGGTGGAGGCCTCTGCCCCGACCCTCCACTTGGGAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: HLVIDGLGGGLCPDPPLGRLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...CCCAAGTGGAGGGTCGGGGCAGAGGCCTCCACCAAGGCCATCAATAACCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HLGTACYYGGWASLKQCWRQLFG*GTRTPL
Trigger: CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCT...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAAAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTERQLFG*GTRTPL
Trigger: CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCT...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAGCCCCGACCCTCCACTaGGGAACTGCCTGCTACTAC +
Preference number: 5 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLAPTLH*GTACYY
Trigger: GTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGC...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS TCA 90 bp TCTCTCATAAGGGCATTCATCACATCCCTGAGGGCACTGCCCTCATaGCCTGATCACCTCCCAAAGACCCTGACAAATTCTGTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLIRAFITSLRALPS*PDHLPKTLTNSVCW
Trigger: CCAGCAGACAGAATTTGTCAGGGTCTTTGGGAGGTGATCAGGTCATGAGGGCAGTGCCCTCAGGGATGTGATGAATGCCCTTATGAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498383.5
CDS CCA 90 bp GGCACCAGAAAAACTTGTAGGAGTAGCAACAGCTATTTGGTCGGATaGAGGCCAGAAGCCAAGAATAATCGAAACACGCTGCCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: GTRKTCRSSNSYLVG*RPEAKNNRNTLPAP
Trigger: GGGCGCTGGCAGCGTGTTTCGATTATTCTTGGCTTCTGGCCTCCATCCGACCAAATAGCTGTTGCTACTCCTACAAGTTTTTCTGGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS CCA 90 bp TTAAAAATACAGTCACTGAAGTTGGCCTCTGTGAAGGCTGAGTCCTaGGGAACCGGGACCGAGAAGATTTCGAAGGTGGAGGAGCGTGTC +
Preference number: 5 (lower is better)
Translates to: LKIQSLKLASVKAES*GTGTEKISKVEERV
Trigger: GACACGCTCCTCCACCTTCGAAATCTTCTCGGTCCCGGTTCCCCAGGACTCAGCCTTCACAGAGGCCAACTTCAGTGACTGTATTTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS-3UTR CAA 90 bp GAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAGAGCCGCCCCCGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: ERGARHRVLRKQSCRAAPAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...GGGGGCGGCTCTGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATCCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTC +
Preference number: 5 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYPAGNS*VWGPEL
Trigger: GAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGG...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAAATGCAAGGCAAGCATTCTCCCACTGGCCCCCTAACGGTTAACTATCCTGGCCCAGCCCTCTTCTATTaGATAGAGGTCTGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: QMQGKHSPTGPLTVNYPGPALFY*IEVCPS
Trigger: TGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGG...GCCAGGATAGTTAACCGTTAGGGGGCCAGTGGGAGAATGCTTGCCTTGCATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGACTTGCCCTTTGGCTCTaGCCCCCGACATCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRLALWL*PPTSLL
Trigger: CAGGAGAGATGTCGGGGGCAAGAGCCAAAGGGCAAG...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS CCA 90 bp TTCAAATCCTGTGTATTCTCCTCAAAGCCTGAGGATGCCCAGGGTTaGGGGCACCAGAGTCCCAGCACAGCTTTAGCAAAAATACCCATG +
Preference number: 5 (lower is better)
Translates to: FKSCVFSSKPEDAQG*GHQSPSTALAKIPM
Trigger: CATGGGTATTTTTGCTAAAGCTGTGCTGGGACTCTGGTGCCCCCAACCCTGGGCATCCTCAGGCTTTGAGGAGAATACACAGGATTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000369669.5
ENST00000480988.5
ENST00000490067.5
CDS-3UTR CAA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAATCCTCCCATCAGTGGTaGCAAATGGCTTACAGATAC +
Preference number: 5 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTESSHQW*QMAYRY
Trigger: GTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCCCAAAATGCGGTGACTaGACTTCAACCCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: HARDSEMCTLCAENDGAVPKCGD*TSTPTA
Trigger: GGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTGG...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACA +
Preference number: 5 (lower is better)
Translates to: HLGTACYYGGWASLKQCWGGWAS*KQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCACCAGCCCTCTTCTATTaGATAGAGGTCTGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSAPALFY*IEVCPS
Trigger: TGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGG...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLPRSAI*PLSQAP
Trigger: TGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGG...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTACCTGCAGGCAACTCTTaGGTTTGGGGACCAGAACTC +
Preference number: 5 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLPAGNS*VWGPEL
Trigger: GAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGG...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAACTACCGAGAATCTCTaGCCCTTTGGCTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRTTENL*PFGSCP
Trigger: GGGGCAAGAGCCAAAGGGCAAGAGATTCTCGGTAGT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS GCA 90 bp ATTTGGTCGGATGGAGGCCAGAAGCCAAGAATAATCGAAACACGCTaGCAGCGCCCATTAGATGGATGGGAAATGAGTGTAACTCATTGG +
Preference number: 5 (lower is better)
Translates to: IWSDGGQKPRIIETR*QRPLDGWEMSVTHW
Trigger: CCAATGAGTTACACTCATTTCCCATCCATCTAATGGGCGCTGGCAGCGTGTTTCGATTATTCTTGGCTTCTGGCCTCCATCCGACCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS-3UTR CAA 90 bp CCTCCCTGTCAGCCTGAGCACAACCATGAGGTTACACACACACACACAGAGGTGATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: PPCQPEHNHEVTHTHTEVIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...CACCTCTGTGTGTGTGTGTGTAACCTCATGGTTGTGCTCAGGCTGACAGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp TGGGCCTTGTGGAGAGAGGTGCCAGACACAGAGTTCTCCGTAAGCAATCCTGCAAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: WALWREVPDTEFSVSNPARLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...TGCAGGATTGCTTACGGAGAACTCTGTGTCTGGCACCTCTCTCCACAAGGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACCCCTTCTCCCAGCCCTCTTCTATTTGATAGAGGTCTGTCCCTCAGATCAGCAAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: TPSPSPLLFDRGLSLRSARKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...TGCTGATCTGAGGGACAGACCTCTATCAAATAGAAGAGGGCTGGGAGAAGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGAGAAAAGAGAGGGCGTaGACAAACTCATTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: VTLPTCRQLFGLGTRTPLRKERA*TNSFSH
Trigger: GTGGGAAAATGAGTTTGTCAACGCCCTCTCTTTTCT...CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAAGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 5 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTEAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTCTGGTGGGGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 5 (lower is better)
Translates to: ITNLQATLWFGDQNSSGGAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...CCCACCAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACA +
Preference number: 5 (lower is better)
Translates to: QSHITNLQATLWFGDQNSGGWAS*KQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTGCCCCGACCCTCCACTaGGGAACTGCCTGCTACTAC +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFAPTLH*GTACYY
Trigger: GTAGTAGCAGGCAGTTCCCAAGTGGAGGGTCGGGGC...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGCAGTCCCAACCAGTAAGTCTTaGCCAAATTCTCAGACCCAC +
Preference number: 5 (lower is better)
Translates to: HARDSEMCTLCAENDGAVPTSKS*PNSQTH
Trigger: GTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGG...GACTGCTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATAAACAAAAACAAACATaGCCTGGCCCTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYKQKQT*PGPEGL
Trigger: CAGACCCTCAGGGCCAGGCAATGTTTGTTTTTGTTT...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS TCA 90 bp TCTGCTGGTTTCATTTTCTCTGTTCCTCGAAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCCTCCCATCAGTGGTTGCAAATGGCT +
Preference number: 5 (lower is better)
Translates to: SAGFIFSVPRRRTWF*NAALCSSHQWLQMA
Trigger: AGCCATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAAACCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000466360.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS-3UTR CAA 90 bp GGTGACTTGACTTCAACCCCAACAGCCCCTGTAAGTAGCCCTGGCCAAACAGAAGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: GDLTSTPTAPVSSPGQTEAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...TTCTGTTTGGCCAGGGCTACTTACAGGGGCTGTTGGGGTTGAAGTCAAGTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATAGAAAAGAGAGGGCGTaGACAAACTCATTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYRKERA*TNSFSH
Trigger: GTGGGAAAATGAGTTTGTCAACGCCCTCTCTTTTCT...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAACTGCTACTACGGGGGTaGGGCATCTTTGAAGCAATG +
Preference number: 5 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKLLLRG*GIFEAM
Trigger: CATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAG...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTAGAATCTCTTGCCCTTaGGCTCTTGCCCCCGACATC +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIRISCP*ALAPDI
Trigger: GATGTCGGGGGCAAGAGCCAAAGGGCAAGAGATTCT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS TCA 90 bp GACCTGATCACCTCCCAAAGACCCTACCTCGTAACATCACATTGGTaGTTAGAATTTTGGGGGAAACACAAACATGCACACCACAGCACT +
Preference number: 5 (lower is better)
Translates to: DLITSQRPYLVTSHW*LEFWGKHKHAHHST
Trigger: AGTGCTGTGGTGTGCATGTTTGTGTTTCCCCCAAAATTCTAATCACCAATGTGATGTTACGAGGTAGGGTCTTTGGGAGGTGATCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000492274.1
CDS GCA 90 bp TGGTTTCATTTTCTCTGTTCCTCGAAGGAGAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCATCAGTGGTTGCAAATGGCTTACAG +
Preference number: 5 (lower is better)
Translates to: WFHFLCSSKENLVLK*CSLFLPSVVANGLQ
Trigger: CTGTAAGCCATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000466360.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS-3UTR CAA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp CACTTGGGAACTGCCTGCTACTACGGGGGTTGGGCATCTTTGAAGCAATGTTGGTTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: HLGTACYYGGWASLKQCWFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...CCAACATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAGGCAGTTCCCAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGGTTCATGCCAGAGATAGTGAGATGTGCACCCTATGTGCTGAGAATGATGGAGAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: WFMPEIVRCAPYVLRMMERKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...CTCCATCATTCTCAGCACATAGGGTGCACATCTCACTATCTCTGGCATGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTCCAAAATGCGGTGACTaGACTTCAACCCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIPKCGD*TSTPTA
Trigger: GGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTGG...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACTGCATGGGGTATAACTGCCAAGCCTACTGCTCATGACCTGTGGTTGTTTTTAGGGGGTTGGGCATCTTaGAAGCAATGTTGGATAACA +
Preference number: 5 (lower is better)
Translates to: TAWGITAKPTAHDLWLFLGGWAS*KQCWIT
Trigger: TGTTATCCAACATTGCTTCAAAGATGCCCAACCCCC...TAAAAACAACCACAGGTCATGAGCAGTAGGCTTGGCAGTTATACCCCATGCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTCTGCTACTACGGGGGTaGGGCATCTTTGAAGCAATG +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKILLLRG*GIFEAM
Trigger: CATTGCTTCAAAGATGCCCAACCCCCGTAGTAGCAG...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATCCTCCCATCAGTGGTaGCAAATGGCTTACAGATAC +
Preference number: 5 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKSSHQW*QMAYRY
Trigger: GTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGTCCTCCCATCAGTGGTaGCAAATGGCTTACAGATAC +
Preference number: 5 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWSSHQW*QMAYRY
Trigger: GTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRRKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp TGCACCCTATGTGCTGAGAATGATGGAGCAGTCTCCTATGACTGCATGGGGTATCAATTTCATCTACAGTaGTCCTTTTTGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: CTLCAENDGAVSYDCMGYQFHLQ*SFLTAS
Trigger: GGAAGCTGTCAAAAAGGACAACTGTAGATGAAATTG...ATACCCCATGCAGTCATAGGAGACTGCTCCATCATTCTCAGCACATAGGGTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCCAATTTCATCTACAGTaGTCCTTTTTGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QSHITNLQATLWFGDQNSQFHLQ*SFLTAS
Trigger: GGAAGCTGTCAAAAAGGACAACTGTAGATGAAATTG...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGCCAACCAGTAAGTCTTaGCCAAATTCTCAGACCCAC +
Preference number: 5 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWPTSKS*PNSQTH
Trigger: GTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGG...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TATCAAGAACACCAACCAGTAAGTCTTTGCCAAATTCTCAGACCCACTCAGGACCCAACCAGTAAGTCTTaGCCAAATTCTCAGACCCAC +
Preference number: 5 (lower is better)
Translates to: YQEHQPVSLCQILRPTQDPTSKS*PNSQTH
Trigger: GTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGG...GTCCTGAGTGGGTCTGAGAATTTGGCAAAGACTTACTGGTTGGTGTTCTTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CAAAGTCACATTACCAACCTGCAGGCAACTCTTTGGTTTGGGGACCAGAACTCCTTTCTATTCCTCCTGTaGCAGGGAGTAATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: QSHITNLQATLWFGDQNSFLFLL*QGVISS
Trigger: AGAAGAAATTACTCCCTGCAACAGGAGGAATAGAAA...GGAGTTCTGGTCCCCAAACCAAAGAGTTGCCTGCAGGTTGGTAATGTGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS GCA 90 bp TTTCATTTTCTCTGTTCCTCGAAGGAGAACCTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCAGTGGTTGCAAATGGCTTACAGATA +
Preference number: 5 (lower is better)
Translates to: FHFLCSSKENLVLKC*SLFLPSVVANGLQI
Trigger: TATCTGTAAGCCATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000466360.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS GCA 90 bp AATGTAGATTCTGATTCAGAAGGTCTGGAATGGTGCCTGAAGTTATaGATTTTTCATGAGCTCCTGGGTGATGGTGATGCTCCTACTGCA +
Preference number: 5 (lower is better)
Translates to: NVDSDSEGLEWCLKL*IFHELLGDGDAPTA
Trigger: TGCAGTAGGAGCATCACCATCACCCAGGAGCTCATGAAAAATGCATAACTTCAGGCACCATTCCAGACCTTCTGAATCAGAATCTACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498197.1
CDS CCA 90 bp GGTTCTGAAATGCTGCTCTCTGTTCCTCCCATCAGTGGTTGCAAATaGCTTACAGATACTTGCTCAATAAAAGATGTGCCATGCTTATGG +
Preference number: 5 (lower is better)
Translates to: GSEMLLSVPPISGCK*LTDTCSIKDVPCLW
Trigger: CCATAAGCATGGCACATCTTTTATTGAGCAAGTATCTGTAAGCCATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS CCA 90 bp CCAGAAGCCAAGAATAATCGAAACACGCTGCCAGCGCCCATTAGATaGATGGGAAATGAGTGTAACTCATTGGGAAAGATATTAGACTTC +
Preference number: 5 (lower is better)
Translates to: PEAKNNRNTLPAPIR*MGNECNSLGKILDF
Trigger: GAAGTCTAATATCTTTCCCAATGAGTTACACTCATTTCCCATCCATCTAATGGGCGCTGGCAGCGTGTTTCGATTATTCTTGGCTTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS-3UTR CAA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGATGGCTTACAGATACTaGCTCAATAAAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVMAYRY*LNKRCA
Trigger: GGCACATCTTTTATTGAGCAAGTATCTGTAAGCCAT...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTTCCTCCCATCAGTGGTaGCAAATGGCTTACAGATAC +
Preference number: 5 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLSSHQW*QMAYRY
Trigger: GTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFRQLFG*GTRTPL
Trigger: CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRRLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSRKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIRKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp CTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTGTGAATCTACACAAGTCCTaGAGATCATACTTACAGCTT +
Preference number: 5 (lower is better)
Translates to: LPLFSWVSTGRSEMVSCVNLHKS*RSYLQL
Trigger: AAGCTGTAAGTATGATCTCAAGGACTTGTGTAGATT...CACACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp TCACAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: SQQPCEVGVTVTLQMLFRAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...TCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTACAATTTCATCTACAGTaGTCCTTTTTGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVQFHLQ*SFLTAS
Trigger: GGAAGCTGTCAAAAAGGACAACTGTAGATGAAATTG...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CTTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTCCAAAATGCGGTGACTaGACTTCAACCCCAACAGCC +
Preference number: 5 (lower is better)
Translates to: LKIFLCSLPFYEYIDGAAPKCGD*TSTPTA
Trigger: GGCTGTTGGGGTTGAAGTCAAGTCACCGCATTTTGG...AGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp CCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTGGGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 5 (lower is better)
Translates to: PCEVGVTVTLQMLFRKIWAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...CCAAATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGAGGCAACTCTTTGGTTaGGGGACCAGAACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLRQLFG*GTRTPL
Trigger: CAGAGGAGTTCTGGTCCCCAAACCAAAGAGTTGCCT...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGGTGTCAGTATTTCTATTCCTCCTGTaGCAGGGAGTAATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YFLWVIGRYRAIASGVSVFLFLL*QGVISS
Trigger: AGAAGAAATTACTCCCTGCAACAGGAGGAATAGAAA...TACTGACACCCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp AGAAGCTATTATTTTCTTTGGGTGATTGGCAGGTATAGGGCAATAGCCAGTGGGATGGCTTACAGATACTaGCTCAATAAAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: RSYYFLWVIGRYRAIASGMAYRY*LNKRCA
Trigger: GGCACATCTTTTATTGAGCAAGTATCTGTAAGCCAT...CCCACTGGCTATTGCCCTATACCTGCCAATCACCCAAAGAAAATAATAGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGGGTATCTCTCCTCAGTaGAGCTTCATGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLGISPQ*SFMLRT
Trigger: AGTCCTCAGCATGAAGCTCAACTGAGGAGAGATACC...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTGTAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: YLPLFSWVSTGRSEMVSCRLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...ACAAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp ATTTACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGAGAAAGCATAGGCAATaGCTTCACTATCACCCCGTT +
Preference number: 5 (lower is better)
Translates to: IYNKYLPLFSWVSTGRSERKHRQ*LHYHPV
Trigger: AACGGGGTGATAGTGAAGCAATTGCCTATGCTTTCT...CTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAGCTGTTCAGAAAAATTaGGTGATTTGTCCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKAVQKN*VICPRS
Trigger: TGACCTTGGACAAATCACCAAATTTTTCTGAACAGC...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTAAACAAAAACAAACATaGCCTGGCCCTGAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFKQKQT*PGPEGL
Trigger: CAGACCCTCAGGGCCAGGCAATGTTTGTTTTTGTTT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS GCA 90 bp AATACCCATGATTTCAGGAAACTGGTGAGTGAGAATGGCTATCATTaGTGTAGAAGAGCAAAATCCTGCTGTGAAATGGATGAACAAAGG +
Preference number: 5 (lower is better)
Translates to: NTHDFRKLVSENGYH*CRRAKSCCEMDEQR
Trigger: CCTTTGTTCATCCATTTCACAGCAGGATTTTGCTCTTCTACAGCAATGATAGCCATTCTCACTCACCAGTTTCCTGAAATCATGGGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369666.5
ENST00000369669.5
ENST00000418497.5
ENST00000463235.5
ENST00000480988.5
ENST00000490067.5
ENST00000490715.5
ENST00000497457.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTATGGCTTACAGATACTaGCTCAATAAAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIMAYRY*LNKRCA
Trigger: GGCACATCTTTTATTGAGCAAGTATCTGTAAGCCAT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp AAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: KYLPLFSWVSTGRSEMVSIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...AGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp TCCCACTCATGGCTTATATTATCTCTGAGCATCTCGGTGGCTATTCCTCATTTAATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: SHSWLILSLSISVAIPHLIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...TAAATGAGGAATAGCCACCGAGATGCTCAGAGATAATATAAGCCATGAGTGGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp ACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: TTNIFHCSAGLAQADQRWFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...CCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLRLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTAACAAATATCTTCCATaGTTCAGCTGGGTTAGCACA +
Preference number: 5 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLNKYLP*FSWVST
Trigger: TGTGCTAACCCAGCTGAACAATGGAAGATATTTGTT...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CAACAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAATTAAAAATACAGTCATaGATCGCTCATCATCGACTC +
Preference number: 5 (lower is better)
Translates to: QQPCEVGVTVTLQMLFRKLKIQS*IAHHRL
Trigger: GAGTCGATGATGAGCGATCAATGACTGTATTTTTAA...TTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS-3UTR CAA 90 bp TACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGTTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: YNKYLPLFSWVSTGRSEMFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...CATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp CAACCCTGTGAGGTAGGGGTTACTGTCACTTTACAGATGCTGTTCAGAAAAATTTTCTTCCTAATTTTCTaGCACACATTGCCAATCTTC +
Preference number: 5 (lower is better)
Translates to: QPCEVGVTVTLQMLFRKIFFLIF*HTLPIF
Trigger: GAAGATTGGCAATGTGTGCAAGAAAATTAGGAAGAA...AATTTTTCTGAACAGCATCTGTAAAGTGACAGTAACCCCTACCTCACAGGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369669.5
ENST00000490715.5
CDS-3UTR CAA 90 bp AATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGATGGTTTCTTAATCTACACAAGTCCTaGAGATCATACTTACAGCTT +
Preference number: 5 (lower is better)
Translates to: NIFHCSAGLAQADQRWFLNLHKS*RSYLQL
Trigger: AAGCTGTAAGTATGATCTCAAGGACTTGTGTAGATT...AAGAAACCATCTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp ATTTACAACAAATATCTTCCATTGTTCAGCTGGGTTAGCACAGGCAGATCAGAGAACAAATATCTTCCATaGTTCAGCTGGGTTAGCACA +
Preference number: 5 (lower is better)
Translates to: IYNKYLPLFSWVSTGRSENKYLP*FSWVST
Trigger: TGTGCTAACCCAGCTGAACAATGGAAGATATTTGTT...CTCTGATCTGCCTGTGCTAACCCAGCTGAACAATGGAAGATATTTGTTGTAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343210.11
ENST00000369666.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTGCTCATGACCTGTGGTaGTTTTTAACTCTTAACTGG +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFAHDLW*FLTLNW
Trigger: CCAGTTAAGAGTTAAAAACAACCACAGGTCATGAGC...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTATGGCTTACAGATACTaGCTCAATAAAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFMAYRY*LNKRCA
Trigger: GGCACATCTTTTATTGAGCAAGTATCTGTAAGCCAT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTATTGTTTCTCCTGCCTaGAGTGCCTGTTTAAATAAC +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFIVSPA*SACLNN
Trigger: GTTATTTAAACAGGCACTCAAGGCAGGAGAAACAAT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFRLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TGTAAAAGTAAGAATGCCAGCCTTAACCTAGCCCTGCAGATAAAAGCTAACTTTTTTCTATTCCTCCTGTaGCAGGGAGTAATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: CKSKNASLNLALQIKANFFLFLL*QGVISS
Trigger: AGAAGAAATTACTCCCTGCAACAGGAGGAATAGAAA...AAAGTTAGCTTTTATCTGCAGGGCTAGGTTAAGGCTGGCATTCTTACTTTTACA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGATGGCTTACAGATACTaGCTCAATAAAAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLMAYRY*LNKRCA
Trigger: GGCACATCTTTTATTGAGCAAGTATCTGTAAGCCAT...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGCAATTTCATCTACAGTaGTCCTTTTTGACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLQFHLQ*SFLTAS
Trigger: GGAAGCTGTCAAAAAGGACAACTGTAGATGAAATTG...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS-3UTR CAA 90 bp TTAAAATTTTCCTTTGCTCACTTCCATTCTATGAGTATATCGATGGAGCAGCTGTTTCTATTCCTCCTGTaGCAGGGAGTAATTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LKFSFAHFHSMSISMEQLFLFLL*QGVISS
Trigger: AGAAGAAATTACTCCCTGCAACAGGAGGAATAGAAA...CAGCTGCTCCATCGATATACTCATAGAATGGAAGTGAGCAAAGGAAAATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS GCA 90 bp TTGATGCTCCACTGTGGAGTCTTTGATCAGTTGAATTTGTCAGTGTaGATTTTGTATGCTCATTTCTTGAAAAGGGTCTTAAATACAAGA +
Preference number: 5 (lower is better)
Translates to: LMLHCGVFDQLNLSV*ILYAHFLKRVLNTR
Trigger: TCTTGTATTTAAGACCCTTTTCAAGAAATGAGCATACAAAATGCACACTGACAAATTCAACTGATCAAAGACTCCACAGTGGAGCATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS-3UTR CAA 90 bp AGTACTTCAAAAAGGATACCAATAGGGTCTGGCTTTAATCAAGGAATATCTACAAGATTGCTGCTGACTTaGGAAGGCTTATATCATCAT +
Preference number: 5 (lower is better)
Translates to: STSKRIPIGSGFNQGISTRLLLT*EGLYHH
Trigger: ATGATGATATAAGCCTTCCAAAGTCAGCAGCAATCT...TGTAGATATTCCTTGATTAAAGCCAGACCCTATTGGTATCCTTTTTGAAGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000490715.5
CDS GCA 72 bp CTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAGGAGCTGGGAGGGGAG +
Preference number: 6 (lower is better)
Translates to: LRLHPRRHGPPS*RYRRRQELGGE
Trigger: CTCCCCTCCCAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343210.11
ENST00000360743.8
ENST00000369666.5
ENST00000490067.5
CDS CAA 72 bp GCTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCAGGAGCTGGGAGGGGA +
Preference number: 6 (lower is better)
Translates to: AAASPTPPRSAI*PLSQAPGAGRG
Trigger: TCCCCTCCCAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343210.11
ENST00000360743.8
ENST00000369666.5
ENST00000490067.5
CDS CAA 90 bp GCTCCAACAGCTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCAGGAGCTGGGAGGGGAGAAGGACAG +
Preference number: 6 (lower is better)
Translates to: APTAAASPTPPRSAI*PLSQAPGAGRGEGQ
Trigger: CTGTCCTTCTCCCCTCCCAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343210.11
ENST00000360743.8
ENST00000369666.5
ENST00000490067.5
CDS GCA 72 bp CTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTTaGCGCTATCGCAGGCGCCAGGAGCTAAGGCAAACC +
Preference number: 6 (lower is better)
Translates to: LRLHPRRHGPPS*RYRRRQELRQT
Trigger: GGTTTGCCTTAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467335.5
ENST00000490715.5
CDS CCA 72 bp ACGTCACTCCCGCGCATAACTGACATGGGGCCCTCTTaGTCGGCGTTTCCGGGCGGGTCCTTCCGACGGCCG +
Preference number: 6 (lower is better)
Translates to: TSLPRITDMGPS*SAFPGGSFRRP
Trigger: CGGCCGTCGGAAGGACCCGCCCGGAAACGCCGACCAAGAGGGCCCCATGTCAGTTATGCGCGGGAGTGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467335.5
ENST00000490715.5
ENST00000492274.1
CDS CAA 72 bp GCTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCAGGAGCTAAGGCAAAC +
Preference number: 6 (lower is better)
Translates to: AAASPTPPRSAI*PLSQAPGAKAN
Trigger: GTTTGCCTTAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467335.5
ENST00000490715.5
CDS TCA 72 bp GCGCTGGCGTTAGGAGACGTCACTCCCGCGCATAACTaGCATGGGGCCCTCTTGGTCGGCGTTTCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: ALALGDVTPAHN*HGALLVGVSGR
Trigger: CCGCCCGGAAACGCCGACCAAGAGGGCCCCATGTCAGTTATGCGCGGGAGTGACGTCTCCTAACGCCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467335.5
ENST00000490715.5
ENST00000492274.1
CDS CAA 90 bp GCTCCAACAGCTGCGGCTTCACCCACGCCGCCACGGTCCGCCATCTaGCCGCTATCGCAGGCGCCAGGAGCTAAGGCAAACCCTACTTCC +
Preference number: 6 (lower is better)
Translates to: APTAAASPTPPRSAI*PLSQAPGAKANPTS
Trigger: GGAAGTAGGGTTTGCCTTAGCTCCTGGCGCCTGCGATAGCGGCAAGATGGCGGACCGTGGCGGCGTGGGTGAAGCCGCAGCTGTTGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467335.5
ENST00000490715.5
CDS CCA 72 bp TTTAAAAATACAGTCACTCCTCCCCCGACAGGGAACTaGGGCCCGGCCCGGCTGCGTTGGGAGCCTAGCAGT +
Preference number: 6 (lower is better)
Translates to: FKNTVTPPPTGN*GPARLRWEPSS
Trigger: ACTGCTAGGCTCCCAACGCAGCCGGGCCGGGCCCCAGTTCCCTGTCGGGGGAGGAGTGACTGTATTTTTAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS GCA 72 bp CTCCTCAGAGGCCCTCTAGGACTACCGAGAATCTCTTaGCCTTTGGCTCTTGCCCCCGACATCTCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLRGPLGLPRIS*PLALAPDISPG
Trigger: GCCAGGAGAGATGTCGGGGGCAAGAGCCAAAGGGCAAGAGATTCTCGGTAGTCCTAGAGGGCCTCTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS CCA 72 bp GGGTCTGCTTTCTGGTTCACAGACGGCGCCTTCTCGTaGTGTCCTCCCACGGTAGAAGTGGCAAGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: GSAFWFTDGAFS*CPPTVEVASSS
Trigger: AGAGCTGCTTGCCACTTCTACCGTGGGAGGACACCACGAGAAGGCGCCGTCTGTGAACCAGAAAGCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000498383.5
CDS CAA 90 bp GGCTGCGTTGGGAGCCTAGCAGTGTCCCCAGGAAAAAGAAGCTTCTaGGTCCATGCTGACATACGCTCTCCGCAGTCGGGACGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: GCVGSLAVSPGKRSF*VHADIRSPQSGRFP
Trigger: AGGGAAGCGTCCCGACTGCGGAGAGCGTATGTCAGCATGGACCAAGAAGCTTCTTTTTCCTGGGGACACTGCTAGGCTCCCAACGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS TCA 72 bp GGGCGGACAGCAGCGCCTATTCTGGAGGAACTGGACTaGGATGTGACCCCGAAGTGTTACCGCTTCCAAACG +
Preference number: 6 (lower is better)
Translates to: GRTAAPILEELD*DVTPKCYRFQT
Trigger: CGTTTGGAAGCGGTAACACTTCGGGGTCACATCTCAGTCCAGTTCCTCCAGAATAGGCGCTGCTGTCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS CAA 72 bp ACTCCTCAGAGGCCCTCTAGGACTACCGAGAATCTCTaGCCCTTTGGCTCTTGCCCCCGACATCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TPQRPSRTTENL*PFGSCPRHLSW
Trigger: CCAGGAGAGATGTCGGGGGCAAGAGCCAAAGGGCAAGAGATTCTCGGTAGTCCTAGAGGGCCTCTGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369669.5
CDS CCA 72 bp AGTCCTGGGGAACCGGGACCGAGAAGATTTCGAAGGTaGAGGAGCGTGTCTCAAGATTGGGGCTACCTGTTC +
Preference number: 6 (lower is better)
Translates to: SPGEPGPRRFRR*RSVSQDWGYLF
Trigger: GAACAGGTAGCCCCAATCTTGAGACACGCTCCTCCACCTTCGAAATCTTCTCGGTCCCGGTTCCCCAGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS CAA 72 bp GGGAGCCTAGCAGTGTCCCCAGGAAAAAGAAGCTTCTaGGTCCATGCTGACATACGCTCTCCGCAGTCGGGA +
Preference number: 6 (lower is better)
Translates to: GSLAVSPGKRSF*VHADIRSPQSG
Trigger: TCCCGACTGCGGAGAGCGTATGTCAGCATGGACCAAGAAGCTTCTTTTTCCTGGGGACACTGCTAGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS TCA 72 bp AGGGCATTCATCACATCCCTGAGGGCACTGCCCTCATaGCCTGATCACCTCCCAAAGACCCTACCTCGTAAC +
Preference number: 6 (lower is better)
Translates to: RAFITSLRALPS*PDHLPKTLPRN
Trigger: GTTACGAGGTAGGGTCTTTGGGAGGTGATCAGGTCATGAGGGCAGTGCCCTCAGGGATGTGATGAATGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
CDS CCA 72 bp AGAAGATTTCGAAGGTGGAGGAGCGTGTCTCAAGATTaGGGCTACCTGTTCTTTCGTGGGGCAGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: RRFRRWRSVSQD*GYLFFRGAGKG
Trigger: CCCCTTCCCTGCCCCACGAAAGAACAGGTAGCCCCAATCTTGAGACACGCTCCTCCACCTTCGAAATCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS CCA 72 bp ACCAGAGTCCCAGCACCCGTGGCCTGGCAAAGGTCCTaGGATCTCAAGCTGATGCAAGCAATTTGTGTACAC +
Preference number: 6 (lower is better)
Translates to: TRVPAPVAWQRS*DLKLMQAICVH
Trigger: GTGTACACAAATTGCTTGCATCAGCTTGAGATCCCAGGACCTTTGCCAGGCCACGGGTGCTGGGACTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477682.1
CDS CAA 72 bp ACCGATCGTTCCAGCTGCCGAGCAGCTCTTAAAGCTTaGGATTCGGCTGTCGTGGAGATAACGGGCACCAGA +
Preference number: 6 (lower is better)
Translates to: TDRSSCRAALKA*DSAVVEITGTR
Trigger: TCTGGTGCCCGTTATCTCCACGACAGCCGAATCCAAAGCTTTAAGAGCTGCTCGGCAGCTGGAACGATCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS CAA 72 bp GAGAAGATTTCGAAGGTGGAGGAGCGTGTCTCAAGATaGGGGCTACCTGTTCTTTCGTGGGGCAGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: EKISKVEERVSR*GLPVLSWGREG
Trigger: CCCTTCCCTGCCCCACGAAAGAACAGGTAGCCCCAATCTTGAGACACGCTCCTCCACCTTCGAAATCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS TCA 72 bp CAGCAGCGCCTATTCTGGAGGAACTGGACTGAGATGTaGCCCCGAAGTGTTACCGCTTCCAAACGAAATGAG +
Preference number: 6 (lower is better)
Translates to: QQRLFWRNWTEM*PRSVTASKRNE
Trigger: CTCATTTCGTTTGGAAGCGGTAACACTTCGGGGTCACATCTCAGTCCAGTTCCTCCAGAATAGGCGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS TCA 72 bp AGGGCATTCATCACATCCCTGAGGGCACTGCCCTCATaGCCTGATCACCTCCCAAAGACCCTGACAAATTCT +
Preference number: 6 (lower is better)
Translates to: RAFITSLRALPS*PDHLPKTLTNS
Trigger: AGAATTTGTCAGGGTCTTTGGGAGGTGATCAGGTCATGAGGGCAGTGCCCTCAGGGATGTGATGAATGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498383.5
CDS CAA 90 bp GGAAAAGCCACCGATCGTTCCAGCTGCCGAGCAGCTCTTAAAGCTTaGGATTCGGCTGTCGTGGAGATAACGGGCACCAGAAAAACTTGT +
Preference number: 6 (lower is better)
Translates to: GKATDRSSCRAALKA*DSAVVEITGTRKTC
Trigger: ACAAGTTTTTCTGGTGCCCGTTATCTCCACGACAGCCGAATCCAAAGCTTTAAGAGCTGCTCGGCAGCTGGAACGATCGGTGGCTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS TCA 72 bp ATTCATCACATCCCTGAGGGCACTGCCCTCATGACCTaGTCACCTCCCAAAGACCCTGACAAATTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: IHHIPEGTALMT*SPPKDPDKFCL
Trigger: CAGACAGAATTTGTCAGGGTCTTTGGGAGGTGATCAGGTCATGAGGGCAGTGCCCTCAGGGATGTGATGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498383.5
CDS GCA 72 bp CTCTGTTCCTCGAAGGAGAACCTGGTTCTGAAATGCTaGTCTCTGTTCCTCCCATCAGTGGTTGCAAATGGC +
Preference number: 6 (lower is better)
Translates to: LCSSKENLVLKC*SLFLPSVVANG
Trigger: GCCATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000466360.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS TCA 72 bp AAAAATACAGTCACTGAAGTTGGCCTCTGTGAAGGCTaGGTCCTGGGGAACCGGGACCGAGAAGATTTCGAA +
Preference number: 6 (lower is better)
Translates to: KNTVTEVGLCEG*VLGNRDREDFE
Trigger: TTCGAAATCTTCTCGGTCCCGGTTCCCCAGGACTCAGCCTTCACAGAGGCCAACTTCAGTGACTGTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470519.5
CDS CAA 72 bp CTGTCACGACTCTTCGACAAGGAGAGGTCCCAAATGTaGTCCATCTCCCTACACATGCACTACTTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: LSRLFDKERSQM*SISLHMHYFSP
Trigger: AGGAGAAAAGTAGTGCATGTGTAGGGAGATGGACAACATTTGGGACCTCTCCTTGTCGAAGAGTCGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS CAA 90 bp GAGATAACGGGCACCAGAAAAACTTGTAGGAGTAGCAACAGCTATTaGGTCGGATGGAGGCCAGAAGCCAAGAATAATCGAAACACGCTG +
Preference number: 6 (lower is better)
Translates to: EITGTRKTCRSSNSY*VGWRPEAKNNRNTL
Trigger: CAGCGTGTTTCGATTATTCTTGGCTTCTGGCCTCCATCCGACCAAATAGCTGTTGCTACTCCTACAAGTTTTTCTGGTGCCCGTTATCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS CAA 90 bp GTGATTTTGCTGTCACGACTCTTCGACAAGGAGAGGTCCCAAATGTaGTCCATCTCCCTACACATGCACTACTTTTCTCCTGTACTGTCG +
Preference number: 6 (lower is better)
Translates to: VILLSRLFDKERSQM*SISLHMHYFSPVLS
Trigger: CGACAGTACAGGAGAAAAGTAGTGCATGTGTAGGGAGATGGACAACATTTGGGACCTCTCCTTGTCGAAGAGTCGTGACAGCAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS TCA 72 bp TTCATTTTCTCTGTTCCTCGAAGGAGAACCTGGTTCTaGAATGCTGCTCTCTGTTCCTCCCATCAGTGGTTG +
Preference number: 6 (lower is better)
Translates to: FIFSVPRRRTWF*NAALCSSHQWL
Trigger: CAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000466360.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS GCA 72 bp TTTCTCTGTTCCTCGAAGGAGAACCTGGTTCTGAAATaGTGCTCTCTGTTCCTCCCATCAGTGGTTGCAAAT +
Preference number: 6 (lower is better)
Translates to: FLCSSKENLVLK*CSLFLPSVVAN
Trigger: ATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCATTTCAGAACCAGGTTCTCCTTCGAGGAACAGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 24 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000466360.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS CAA 72 bp GGCACCAGAAAAACTTGTAGGAGTAGCAACAGCTATTaGGTCGGATGGAGGCCAGAAGCCAAGAATAATCGA +
Preference number: 6 (lower is better)
Translates to: GTRKTCRSSNSY*VGWRPEAKNNR
Trigger: TCGATTATTCTTGGCTTCTGGCCTCCATCCGACCAAATAGCTGTTGCTACTCCTACAAGTTTTTCTGGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS CAA 90 bp CTCCCAAAGACCCTACCTCGTAACATCACATTGGTGATTAGAATTTaGGGGGAAACACAAACATGCACACCACAGCACTCTGCTGTTTTG +
Preference number: 6 (lower is better)
Translates to: LPKTLPRNITLVIRI*GETQTCTPQHSAVL
Trigger: CAAAACAGCAGAGTGCTGTGGTGTGCATGTTTGTGTTTCCCCCAAAATTCTAATCACCAATGTGATGTTACGAGGTAGGGTCTTTGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000492274.1
CDS GCA 72 bp TCTGATTCAGAAGGTCTGGAATGGTGCCTGAAGTTATaGATTTTTCATGAGCTCCTGGGTGATGGTGATGCT +
Preference number: 6 (lower is better)
Translates to: SDSEGLEWCLKL*IFHELLGDGDA
Trigger: AGCATCACCATCACCCAGGAGCTCATGAAAAATGCATAACTTCAGGCACCATTCCAGACCTTCTGAATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498197.1
CDS TCA 72 bp ACCTCCCAAAGACCCTACCTCGTAACATCACATTGGTaGTTAGAATTTTGGGGGAAACACAAACATGCACAC +
Preference number: 6 (lower is better)
Translates to: TSQRPYLVTSHW*LEFWGKHKHAH
Trigger: GTGTGCATGTTTGTGTTTCCCCCAAAATTCTAATCACCAATGTGATGTTACGAGGTAGGGTCTTTGGGAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000492274.1
CDS CCA 72 bp ATGCTGCTCTCTGTTCCTCCCATCAGTGGTTGCAAATaGCTTACAGATACTTGCTCAATAAAAGATGTGCCA +
Preference number: 6 (lower is better)
Translates to: MLLSVPPISGCK*LTDTCSIKDVP
Trigger: TGGCACATCTTTTATTGAGCAAGTATCTGTAAGCCATTTGCAACCACTGATGGGAGGAACAGAGAGCAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS CCA 72 bp AAGAATAATCGAAACACGCTGCCAGCGCCCATTAGATaGATGGGAAATGAGTGTAACTCATTGGGAAAGATA +
Preference number: 6 (lower is better)
Translates to: KNNRNTLPAPIR*MGNECNSLGKI
Trigger: TATCTTTCCCAATGAGTTACACTCATTTCCCATCCATCTAATGGGCGCTGGCAGCGTGTTTCGATTATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS CAA 72 bp GTTCTACAGACGTCGAAAGAACTAGCAAACCCACTGTaGTTTGTGGCGCTCTCACTTCCTGTACTATTTTAT +
Preference number: 6 (lower is better)
Translates to: VLQTSKELANPL*FVALSLPVLFY
Trigger: ATAAAATAGTACAGGAAGTGAGAGCGCCACAAACAACAGTGGGTTTGCTAGTTCTTTCGACGTCTGTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459630.5
CDS CAA 72 bp GAAACACAAACATGCACACCACAGCACTCTGCTGTTTaGAGTTTTCTATCTCCCAGAGCCAAACTCAATCTT +
Preference number: 6 (lower is better)
Translates to: ETQTCTPQHSAV*SFLSPRAKLNL
Trigger: AAGATTGAGTTTGGCTCTGGGAGATAGAAAACTCAAAACAGCAGAGTGCTGTGGTGTGCATGTTTGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000492274.1
CDS CAA 90 bp GTAGCAAGTGTTCTACAGACGTCGAAAGAACTAGCAAACCCACTGTaGTTTGTGGCGCTCTCACTTCCTGTACTATTTTATTACTCAAGA +
Preference number: 6 (lower is better)
Translates to: VASVLQTSKELANPL*FVALSLPVLFYYSR
Trigger: TCTTGAGTAATAAAATAGTACAGGAAGTGAGAGCGCCACAAACAACAGTGGGTTTGCTAGTTCTTTCGACGTCTGTAGAACACTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459630.5
CDS TCA 72 bp AAACACAAACATGCACACCACAGCACTCTGCTGTTTTaGGTTTTCTATCTCCCAGAGCCAAACTCAATCTTA +
Preference number: 6 (lower is better)
Translates to: KHKHAHHSTLLF*VFYLPEPNSIL
Trigger: TAAGATTGAGTTTGGCTCTGGGAGATAGAAAACTCAAAACAGCAGAGTGCTGTGGTGTGCATGTTTGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467335.5
ENST00000470683.1
ENST00000485753.5
ENST00000492274.1
CDS CAA 72 bp TCCTCCCATCAGTGGTTGCAAATGGCTTACAGATACTaGCTCAATAAAAGATGTGCCATGCTTATGGAAGTA +
Preference number: 6 (lower is better)
Translates to: SSHQWLQMAYRY*LNKRCAMLMEV
Trigger: TACTTCCATAAGCATGGCACATCTTTTATTGAGCAAGTATCTGTAAGCCATTTGCAACCACTGATGGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000343210.11
ENST00000358039.9
ENST00000360743.8
ENST00000361846.7
ENST00000369664.1
ENST00000369666.5
ENST00000369669.5
ENST00000459630.5
ENST00000463235.5
ENST00000467335.5
ENST00000470519.5
ENST00000470683.1
ENST00000473206.5
ENST00000477332.5
ENST00000479436.5
ENST00000480988.5
ENST00000485753.5
ENST00000490067.5
ENST00000490715.5
ENST00000492274.1
ENST00000497235.5
ENST00000497457.5
ENST00000498383.5
CDS CAA 72 bp GCGCCCATTAGATGGATGGGAAATGAGTGTAACTCATaGGGAAAGATATTAGACTTCAAATCACCTAAGGCA +
Preference number: 6 (lower is better)
Translates to: APIRWMGNECNS*GKILDFKSPKA
Trigger: TGCCTTAGGTGATTTGAAGTCTAATATCTTTCCCAATGAGTTACACTCATTTCCCATCCATCTAATGGGCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000459630.5
ENST00000470519.5
CDS CAA 90 bp AGCATCCTGCCTTCTTTGATGCTCCACTGTGGAGTCTTTGATCAGTaGAATTTGTCAGTGTGCATTTTGTATGCTCATTTCTTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SILPSLMLHCGVFDQ*NLSVCILYAHFLKR
Trigger: CCTTTTCAAGAAATGAGCATACAAAATGCACACTGACAAATTCAACTGATCAAAGACTCCACAGTGGAGCATCAAAGAAGGCAGGATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS CAA 90 bp CTGCCTTCTTTGATGCTCCACTGTGGAGTCTTTGATCAGTTGAATTaGTCAGTGTGCATTTTGTATGCTCATTTCTTGAAAAGGGTCTTA +
Preference number: 6 (lower is better)
Translates to: LPSLMLHCGVFDQLN*SVCILYAHFLKRVL
Trigger: TAAGACCCTTTTCAAGAAATGAGCATACAAAATGCACACTGACAAATTCAACTGATCAAAGACTCCACAGTGGAGCATCAAAGAAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463235.5
CDS TCA 72 bp TGTCTTCAACAGTGCTGCTGTGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATTCATTGTTTAATTCTA +
Preference number: 6 (lower is better)
Translates to: CLQQCCCVTDCC*LWKAYIHCLIL
Trigger: TAGAATTAAACAATGAATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTACACAGCAGCACTGTTGAAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480988.5
CDS TCA 72 bp TGTCTTCAACAGTGCTGCTGTGTAACAGATTGCTGCTaGCTTTGGAAGGCTTATATATCTCTCATTATTTTT +
Preference number: 6 (lower is better)
Translates to: CLQQCCCVTDCC*LWKAYISLIIF
Trigger: AAAAATAATGAGAGATATATAAGCCTTCCAAAGTCAGCAGCAATCTGTTACACAGCAGCACTGTTGAAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497457.5