RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST7 (Homo sapiens)

Ensembl gene IDs: ENSG00000004866

Ensembl transcript IDs: ENST00000265437.9, ENST00000323984.8, ENST00000393443.5, ENST00000393444.7, ENST00000393446.6, ENST00000393447.8, ENST00000393449.5, ENST00000393451.7, ENST00000417919.5, ENST00000420755.5, ENST00000422922.5, ENST00000432298.5, ENST00000434836.5, ENST00000438863.5, ENST00000443979.5, ENST00000446490.5, ENST00000449366.5, ENST00000462544.1, ENST00000464020.1, ENST00000465133.5, ENST00000467538.5, ENST00000477742.5, ENST00000485394.6, ENST00000487459.5, ENST00000490039.1, ENST00000543837.5

Found 896 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGGTTAGAACTGACAGATTGTGAAGGCCGAGACGATGGGATGTaGGGAGTGAGAGAGGGAAGAGTTTGGAAGGGCTGCCGAGTTTCC +
Preference number: 1 (lower is better)
Translates to: RRLELTDCEGRDDGM*GVREGRVWKGCRVS
Trigger: GGAAACTCGGCAGCCCTTCCAAACTCTTCCCTCTCTCACTCCCCACATCCCATCGTCTCGGCCTTCACAATCTGTCAGTTCTAACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR GCA 90 bp TTTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCG +
Preference number: 1 (lower is better)
Translates to: FKISEWLPFFKVMLS*GPQGVGTEEMVAAA
Trigger: CGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR CCA 90 bp TTGTTGGAAGAGTTGTTGTCAACCCCTCCCAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCAATGAATGAAGTTCCGTATTTGCGA +
Preference number: 1 (lower is better)
Translates to: LLEELLSTPPRRGRK*LTETCSMNEVPYLR
Trigger: TCGCAAATACGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR GCA 90 bp AATATAAGCAGTTGCACACTCATTTATCTCCAAGGCTTCATGAGCTaGAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCAGGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: NISSCTLIYLQGFMS*RNPSLGVSLSPGFL
Trigger: CAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAATGAGTGTGCAACTGCTTATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR GCA 90 bp ACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTaGTCTCAAGGAGCTCACATTCTAAATGGGACAGACAAGTTTTCA +
Preference number: 1 (lower is better)
Translates to: TVQSLGDTEIMKTPF*SQGAHILNGTDKFS
Trigger: TGAAAACTTGTCTGTCCCATTTAGAATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR GCA 90 bp CCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTaGTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAAT +
Preference number: 1 (lower is better)
Translates to: PWKYLTLLPQGLLNF*FNNKQTDESRGSGN
Trigger: ATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR CCA 90 bp GCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTaGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCA +
Preference number: 1 (lower is better)
Translates to: AIQKDHSCVSIKERR*RIRQEARRPVKTMA
Trigger: TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR TCA 90 bp GCTGACTTTGGTAAGCTTATATCATCATACTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGTAGTTCCAGAAGGGCTTCTAAAAGG +
Preference number: 1 (lower is better)
Translates to: ADFGKLISSYFAKTA*TSAYACSSRRASKR
Trigger: CCTTTTAGAAGCCCTTCTGGAACTACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAAGTATGATGATATAAGCTTACCAAAGTCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR CCA 90 bp ATTTTGGTTGGACCATGGAAATACTCTCAAATTTTGGTTGGACCATaGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGC +
Preference number: 1 (lower is better)
Translates to: ILVGPWKYSQILVGP*KYLTLLPQGLLNFC
Trigger: GCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCAACCAAAATTTGAGAGTATTTCCATGGTCCAACCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR CAA 90 bp GGAGTGAGAGAGGGAAGAGTTTGGAAGGGCTGCCGAGTTTCCGGCTaGAGCAACGGGGTGGATGGCGGAGGTCAGGAATACAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GVREGRVWKGCRVSG*SNGVDGGGQEYRRR
Trigger: CCTCCTCCTGTATTCCTGACCTCCGCCATCCACCCCGTTGCTCAAGCCGGAAACTCGGCAGCCCTTCCAAACTCTTCCCTCTCTCACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR TCA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGATGGCTGAAGAGCAGTaGCTGTGCAAGAGTTGGGAG +
Preference number: 2 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQMAEEQ*LCKSWE
Trigger: CTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCAT...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGACAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR-3UTR GCA 90 bp GCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 2 (lower is better)
Translates to: AFPRTMQKIQSPFHSLPVHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...CACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR-3UTR CCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGATTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR-3UTR GCA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACAGAGTTTGGAAGGGCTaGCGAGTTTCCGGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHRVWKG*RVSGLS
Trigger: GCTCAAGCCGGAAACTCGGCAGCCCTTCCAAACTCT...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR GCA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCACAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 2 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCAQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR-3UTR GCA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCATACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 2 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCAYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR-3UTR GCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCAAAGGTGCAGAGGTGTaGGAGAGCCTGGTACATCTG +
Preference number: 2 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLKGAEV*ESLVHL
Trigger: CAGATGTACCAGGCTCTCGCACACCTCTGCACCTTT...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR CCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACTTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR-3UTR CCA 90 bp CTTCATACTGGGATCCATGATGTTGTAGCTGCTGAGAGCGTCGGTAACAGCCATAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCA +
Preference number: 2 (lower is better)
Translates to: LHTGIHDVVAAESVGNSHRRGRK*LTETCS
Trigger: TGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCT...ATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR TCA 90 bp GAAGAGGCATTAGTAGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCAGTGAATCACATTTACTaGAGGCCTAGTTGCTTAGGA +
Preference number: 2 (lower is better)
Translates to: EEALVEWMSRVVTVKGIPVNHIY*RPSCLG
Trigger: TCCTAAGCAACTAGGCCTTCAGTAAATGTGATTCAC...TGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCTACTAATGCCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR TCA 90 bp CTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCACCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 2 (lower is better)
Translates to: LQGFMSCRNPSLGVSLSPPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR GCA 90 bp CTTCATACTGGGATCCATGATGTTGTAGCTGCTGAGAGCGTCGGTAACAGCCATTTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: LHTGIHDVVAAESVGNSHFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...ATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR CCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCCCTGGGAATCCACTaGAGAAATTTAAGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLSLGIH*RNLSRE
Trigger: TTCCCTGCTTAAATTTCTCCAGTGGATTCCCAGGGA...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR CCA 90 bp CTTCATACTGGGATCCATGATGTTGTAGCTGCTGAGAGCGTCGGTAACAGCCATGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 2 (lower is better)
Translates to: LHTGIHDVVAAESVGNSHVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...ATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR TCA 90 bp GCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 2 (lower is better)
Translates to: AFPRTMQKIQSPFHSLPVFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...CACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR-3UTR GCA 90 bp CTTCATACTGGGATCCATGATGTTGTAGCTGCTGAGAGCGTCGGTAACAGCCATGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 2 (lower is better)
Translates to: LHTGIHDVVAAESVGNSHDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...ATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR TCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCCTGAGTATAAAAGAATaGAGAGGCATTAGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLLSIKE*RGISRV
Trigger: CACTCTACTAATGCCTCTTCATTCTTTTATACTCAG...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR CAA 90 bp GATGAGTCGAGGGGCTCAGGGAATTCCAGAAATGATTTCGTTGTTTaGTTTCTATACTGTTCCCCCACGAAATGTCATTGGCTTTCAGTT +
Preference number: 2 (lower is better)
Translates to: DESRGSGNSRNDFVV*FLYCSPTKCHWLSV
Trigger: AACTGAAAGCCAATGACATTTCGTGGGGGAACAGTATAGAAACAAAACAACGAAATCATTTCTGGAATTCCCTGAGCCCCTCGACTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR-3UTR TCA 90 bp CAAGACATTGGTGTCTCGTCTATGTTGGGCTTCATACTGGGATCCATGATGTTGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 2 (lower is better)
Translates to: QDIGVSSMLGFILGSMMLLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CAACATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR GCA 90 bp CTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTAGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 2 (lower is better)
Translates to: LLSSGYVLGVGLSFSFLVVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...TACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR-3UTR CCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAATGGCTCTTTCTCTCTaGAAGCCAATACCAATGTTT +
Preference number: 2 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRMALSL*KPIPMF
Trigger: AAACATTGGTATTGGCTTCCAGAGAGAAAGAGCCAT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR-3UTR TCA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGGAGGGAAAGAAGAGGTaGATCACATTTACTGAAGGC +
Preference number: 2 (lower is better)
Translates to: CAIQKDHSCVSIKERRWREGKKR*ITFTEG
Trigger: GCCTTCAGTAAATGTGATTCACCTCTTCTTTCCCTC...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTATAACTAGGAGCTCATaGCTCTTTCTCTCTGGAAGC +
Preference number: 2 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLITRSS*LFLSGS
Trigger: GCTTCCAGAGAGAAAGAGCCATGAGCTCCTAGTTAT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR-3UTR TCA 90 bp TGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGTTGGAAGAGTTGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 2 (lower is better)
Translates to: CLLESESPLLELELLEELDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR CCA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAACTAAGAGGGATGCTTTaGGAAAAGGAGGGAAAGAAG +
Preference number: 2 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKLRGML*EKEGKK
Trigger: CTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAG...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR GCA 90 bp TTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTAGGTATTTTATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: FRICSGGRIKLFISSRYFMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...AAAATACCTACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR GCA 72 bp CTCTATGAATGGCCTCTACTGCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATGCAGCCTCAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: LYEWPLLHSSLL*SAPAEMQPQER
Trigger: TCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTAGAGGCCATTCATAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR-3UTR CAA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACGGAGGAGGAGCAGTTTaGGTGGTGGGGGAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHGGGAV*VVGEEG
Trigger: CCCCTCTTCCCCCACCACCAAAACTGCTCCTCCTCC...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR GCA 72 bp TGCATTCATCTCTGCTGTGCTCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTTGTCAGAGACAGCTCT +
Preference number: 3 (lower is better)
Translates to: CIHLCCAQPPPR*SLRREFVRDSS
Trigger: AGAGCTGTCTCTGACAAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR CCA 72 bp AGCCTGGTACATCTGGGAATGGTGAGTGATCCACTATaGCTGAAGAGCAGTGACTGTGCAAGAGTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: SLVHLGMVSDPL*LKSSDCARVGR
Trigger: TCTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCATAGTGGATCACTCACCATTCCCAGATGTACCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR CCA 72 bp GAGTTGTTGTCAACCCCTCCCAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCAATGAATGAAGTTCCG +
Preference number: 3 (lower is better)
Translates to: ELLSTPPRRGRK*LTETCSMNEVP
Trigger: CGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGGAGGGGTTGACAACAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR CAA 90 bp CTTCATACTGGGATCCATGATGTTGTAGCTGCTGAGAGCGTCGGTAACAGCCATTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 3 (lower is better)
Translates to: LHTGIHDVVAAESVGNSHLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...ATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATGGATCCCAGTATGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR CAA 90 bp CTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCAGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 3 (lower is better)
Translates to: LQGFMSCRNPSLGVSLSPETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR GCA 72 bp TCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGCACAGAGGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: SEWLPFFKVMLS*GPQGVGTEEMV
Trigger: CACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR CCA 72 bp CAGGCTTTCTGCATTATTGCATCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAGAATGTCTGGTGGTCT +
Preference number: 3 (lower is better)
Translates to: QAFCIIASAGRR*SESQVKNVWWS
Trigger: AGACCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR CAA 90 bp ATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 3 (lower is better)
Translates to: IASAGRRWSESQVKNVWWGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...CCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
3UTR-3UTR CAA 90 bp CCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCAAGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 3 (lower is better)
Translates to: PRTMQKIQSPFHSLPVCKASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CTTGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR GCA 72 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTaGTCTCAAGGAGCTCACATTCTAAATGGGACAGAC +
Preference number: 3 (lower is better)
Translates to: SLGDTEIMKTPF*SQGAHILNGTD
Trigger: GTCTGTCCCATTTAGAATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR TCA 72 bp CCTCAGGAGAGAATTTGTCAGAGACAGCTCTTGCTTTaGGCAAAGCAGCTGTGTAGCATATTGTTGCTGACT +
Preference number: 3 (lower is better)
Translates to: PQERICQRQLLL*AKQLCSILLLT
Trigger: AGTCAGCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443979.5
3UTR GCA 72 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGG +
Preference number: 3 (lower is better)
Translates to: LKSRNGFPFSKS*FLAVHKELAQR
Trigger: CCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR GCA 72 bp TACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTaGTTCAACAACAAACAAACTGATGAGTCGAGGGGC +
Preference number: 3 (lower is better)
Translates to: YLTLLPQGLLNF*FNNKQTDESRG
Trigger: GCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR CCA 72 bp AAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTaGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAG +
Preference number: 3 (lower is better)
Translates to: KDHSCVSIKERR*RIRQEARRPVK
Trigger: CTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
3UTR-3UTR CAA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTCCCCACGAAATGTCATaGGCTTTCAGTTTAGTATAC +
Preference number: 3 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLPHEMS*AFSLVY
Trigger: GTATACTAAACTGAAAGCCAATGACATTTCGTGGGG...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
3UTR-3UTR CAA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGAATGATTTCGTTGTTTaGTTTCTATACTGTTCCCCC +
Preference number: 3 (lower is better)
Translates to: IISNMKEIHPYSLSFRRENDFVV*FLYCSP
Trigger: GGGGGAACAGTATAGAAACAAAACAACGAAATCATT...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGAACGGCTCCCTGGACTaGCGAACCGTTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGNGSLD*RTVLGK
Trigger: CTTCCCCAGAACGGTTCGTCAGTCCAGGGAGCCGTT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGCGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGRSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATTGGTGTCTGCCGGGATaGTTCACCGGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHWCLPG*FTGPEA
Trigger: CGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCA...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCGTGGAGCGATCACGTaGCCCCTGCCCCCTCGCGTT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWRGAIT*PLPPRV
Trigger: AACGCGAGGGGGCAGGGGCCACGTGATCGCTCCACG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS-3UTR TCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTGTCTGCCGGGATaGTTCACCGGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSWCLPG*FTGPEA
Trigger: CGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTGGTGTCTGCCGGGATaGTTCACCGGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEWCLPG*FTGPEA
Trigger: CGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCA...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp CCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCAAGTGGTGTCTGCCGGGATaGTTCACCGGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PRTMQKIQSPFHSLPVCKWCLPG*FTGPEA
Trigger: CGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCA...CTTGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAGCGCTCCTCTCTGCTaGCGCGGCTCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWSAPLC*RGSWCL
Trigger: CAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTCAGCGCTCCTCTCTaGTGCCGCGGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQFSAPL*CRGSWC
Trigger: ACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGCTGAGGAAAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGAEESF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCGATCACGTGGCCCCTaGCCCCTCGCGTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKERSRGP*PLAFWV
Trigger: GACCCAGAACGCGAGGGGGCAGGGGCCACGTGATCG...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCAGCGGCGGGTGAGGTaGGTGGAGGACAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSQRRVR*VEDRAS
Trigger: AGAAGCCCTGTCCTCCACTCACCTCACCCGCCGCTG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLAALGV*RDDSPA
Trigger: GGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGC...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAAGCGCTCCTCTCTGCTaGCGCGGCTCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGSAPLC*RGSWCL
Trigger: CAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCT...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GTGCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGAGCGCTCCTCTCTGCTaGCGCGGCTCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VPSHVQCKRFKAPSTLFQSAPLC*RGSWCL
Trigger: CAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCT...CTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTCTATGAAGATTCAGTaGCAAACATGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGSMKIQ*QTWLAP
Trigger: TGGAGCCAGCCATGTTTGGCACTGAATCTTCATAGA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR CCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR CAA 72 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKE*AQRRWWQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGCCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGAGCGCTCCTCTCTGCTaGCGCGGCTCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKESAPLC*RGSWCL
Trigger: CAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAAGCGCTCCTCTCTGCTaGCGCGGCTCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRSAPLC*RGSWCL
Trigger: CAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCT...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp GCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTTCAGCGCTCCTCTCTaGTGCCGCGGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: AFPRTMQKIQSPFHSLPVFSAPL*CRGSWC
Trigger: ACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAA...CACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp GATCCACTATGGCTGAAGAGCAGTGACTGTGCAAGAGTTGGGAGAGCTAAGGCTATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: DPLWLKSSDCARVGRAKAMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...AGCCTTAGCTCTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCATAGTGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp ATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: IASAGRRWSESQVKNVWWMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...CCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAADFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKELAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSLAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWRSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGACAGCAGGGGCAGGACTaGGAGCAGCAGCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGQQGQD*EQQQQR
Trigger: CCGCTGTTGCTGCTGCTCCCAGTCCTGCCCCTGCTG...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR CCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACCGACGTGCCTCTTCTaGGATGCGGTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRPTCLF*DAVRLD
Trigger: GTCCAGCCTCACCGCATCCCAGAAGAGGCACGTCGG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCCGACGTGCCTCTTCTaGGATGCGGTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSPTCLF*DAVRLD
Trigger: GTCCAGCCTCACCGCATCCCAGAAGAGGCACGTCGG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTGCCCCCTCGCGTTCTaGGTCCATTTATATTTATTA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGCPLAF*VHLYLL
Trigger: TAATAAATATAAATGGACCCAGAACGCGAGGGGGCA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS-3UTR CCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGACTGACGAACCGTTCTaGGGAAGCCTCCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQTDEPF*GSLLPC
Trigger: ACATGGCAGGAGGCTTCCCCAGAACGGTTCGTCAGT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTGCATTCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTATGGTGTCTGCCGGGATaGTTCACCGGCCCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LHSETLCLLESESPLLELWCLPG*FTGPEA
Trigger: CGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCA...TAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAAACGGCTCCCTGGACTaGCGAACCGTTCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRNGSLD*RTVLGK
Trigger: CTTCCCCAGAACGGTTCGTCAGTCCAGGGAGCCGTT...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGAALGV*RDDSPA
Trigger: GGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGC...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTTCAGCGCTCCTCTCTaGTGCCGCGGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGFSAPL*CRGSWC
Trigger: ACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATTCAGCGCTCCTCTCTaGTGCCGCGGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTFSAPL*CRGSWC
Trigger: ACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp CGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTTTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RWRIRQEARRPVKTMAGVYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...AACTCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCTGAGGAAAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAAEESF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATTGGCACAGAGGAGATaGTGGCAGCGGCGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELALAQRR*WQRRVR
Trigger: CCTCACCCGCCGCTGCCACCATCTCCTCTGTGCCAA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACCGACGTGCCTCTTCTaGGATGCGGTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAPTCLF*DAVRLD
Trigger: GTCCAGCCTCACCGCATCCCAGAAGAGGCACGTCGG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACCGACGTGCCTCTTCTaGGATGCGGTGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRPTCLF*DAVRLD
Trigger: GTCCAGCCTCACCGCATCCCAGAAGAGGCACGTCGG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATCCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGCCGAAGAGCTGCTTTTaGAAATCCACTAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAPKSCF*KSTRQM
Trigger: CATTTGCCTAGTGGATTTTCAAAAGCAGCTCTTCGG...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGTTCTCCCGGTGTGATTaGAATGCAAGGTCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAFSRCD*NARSLN
Trigger: GTTAAGAGACCTTGCATTTCAATCACACCGGGAGAA...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGTGAGAGTGAAGAGATaGGCCGGCTACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEVRVKR*AGYTAG
Trigger: CCCTGCTGTGTAGCCGGCTCATCTCTTCACTCTCAC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp ATTTATCTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCTTCAGCGCTCCTCTCTaGTGCCGCGGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: IYLQGFMSCRNPSLGVSLFSAPL*CRGSWC
Trigger: ACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAA...GAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp GATCCACTATGGCTGAAGAGCAGTGACTGTGCAAGAGTTGGGAGAGCTAAGGCTCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: DPLWLKSSDCARVGRAKALHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...AGCCTTAGCTCTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCATAGTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACACAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACACATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGCCTCAGGAGAGAATTTGTCAGAGACAGCTCTTGCTTTGAGCAAAGCAGCTGTCATTCATCTCTGCTGTaGTCAGCCCCCGCCGAGATG +
Preference number: 4 (lower is better)
Translates to: SLRREFVRDSSCFEQSSCHSSLL*SAPAEM
Trigger: CATCTCGGCGGGGGCTGAGCACAGCAGAGATGAATG...ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGCCTCAGGAGAGAATTTGTCAGAGACAGCTCTTGCTTTGAGCAAAGCAGCTGTTACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SLRREFVRDSSCFEQSSCYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323984.8
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATAAAGGTGCAGAGGTGTaGGAGAGCCTGGTACATCTG +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHKGAEV*ESLVHL
Trigger: CAGATGTACCAGGCTCTCGCACACCTCTGCACCTTT...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGTCAATGAAGATTCAGTaGCAAACATGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAASMKIQ*QTWLAP
Trigger: TGGAGCCAGCCATGTTTGGCACTGAATCTTCATTGA...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGTGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAACTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IASAGRRWSESQVKNVWWFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...CCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWRSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRRSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGATTCAGTGCCAAACATaGCTGGCTCCAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWIQCQT*LAPEAA
Trigger: AGCAGCCTCTGGAGCCAGCCATGTTTGGCACTGAAT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAATGAAACGGCTCCCTaGACTGACGAACCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWNETAP*TDEPFW
Trigger: CCAGAACGGTTCGTCAGTCCAGGGAGCCGTTTCATT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: AFPRTMQKIQSPFHSLPVKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...CACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp AGTAAGAGGCTCTCGTCCTGTCACCCAAGTATACCGATTGTATTCAGCACCCCTCCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: SKRLSSCHPSIPIVFSTPPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...AGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTCTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGGGCCAGCATGGCTGTaGAGGAACATAATCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEGPAWL*RNIIQQ
Trigger: CTGCTGGATTATGTTCCTTCACAGCCATGCTGGCCC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAACACAGCAGGGGTCATaGAGCCAGACAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTTQQGS*SQTMQS
Trigger: GGACTGCATTGTCTGGCTTCATGACCCCTGCTGTGT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTACACAGCAGGGGTCATaGAGCCAGACAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSTQQGS*SQTMQS
Trigger: GGACTGCATTGTCTGGCTTCATGACCCCTGCTGTGT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAGTGAGAGTGAAGAGATaGGCCGGCTACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRVRVKR*AGYTAG
Trigger: CCCTGCTGTGTAGCCGGCTCATCTCTTCACTCTCAC...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHAALGV*RDDSPA
Trigger: GGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGC...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp TTGCATTCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAAGCGCTCCTCTCTGCTaGCGCGGCTCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LHSETLCLLESESPLLELSAPLC*RGSWCL
Trigger: CAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCT...TAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATACTGCATTCATCTCTaGTGTGCTCAGCCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAYCIHL*CAQPPP
Trigger: CGGCGGGGGCTGAGCACAGCAGAGATGAATGCAGTA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAAAGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAAGAGTTTGGAAGGGCTaGCGAGTTTCCGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ERRWRIRQEARRPVKTMARVWKG*RVSGLS
Trigger: GCTCAAGCCGGAAACTCGGCAGCCCTTCCAAACTCT...TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGCTGAGGAAAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQAEESF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWRRGRK*LTETCS
Trigger: TGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGATCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACACAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELARSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: QSLGDTEIMKTPFCSQGAKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...AGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp AGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGTCTTGGGCAGAGAGATTCAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: RWSESQVKNVWWSWAERFKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...GAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp CCCAGAAGGGGGCGCAAGTGGCTTACTGAGACTTGTTCAATGAATGAAGTTCCGTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: PRRGRKWLTETCSMNEVPCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...CGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: IASAGRRWSESQVKNVWWISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...CCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CAACAAGGACCTAGACTAAGAGGGATGCTTTGGGAAAAGGAGGGAAAGAAGAGGATGGCTGAAGAGCAGTaGCTGTGCAAGAGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QQGPRLRGMLWEKEGKKRMAEEQ*LCKSWE
Trigger: CTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCAT...CCTCTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAGTCTAGGTCCTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTGATCCACTATGGCTaGAGAGCAGTGACTGTGCAA +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGVIHYG*RAVTVQ
Trigger: TTGCACAGTCACTGCTCTTCAGCCATAGTGGATCAC...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAAATCCACTAGGCAAATaGAGGCCGACGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTNPLGK*RPTCLF
Trigger: GAAGAGGCACGTCGGCCTTCATTTGCCTAGTGGATT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGAATCCACTAGGCAAATaGAGGCCGACGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKENPLGK*RPTCLF
Trigger: GAAGAGGCACGTCGGCCTTCATTTGCCTAGTGGATT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAAATCCACTAGGCAAATaGAGGCCGACGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRNPLGK*RPTCLF
Trigger: GAAGAGGCACGTCGGCCTTCATTTGCCTAGTGGATT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCCGAAGAGCTGCTTTTaGAAATCCACTAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQPKSCF*KSTRQM
Trigger: CATTTGCCTAGTGGATTTTCAAAAGCAGCTCTTCGG...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGTGAGAGTGAAGAGATaGGCCGGCTACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKVRVKR*AGYTAG
Trigger: CCCTGCTGTGTAGCCGGCTCATCTCTTCACTCTCAC...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp CTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTAGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: LLSSGYVLGVGLSFSFLVAALGV*RDDSPA
Trigger: GGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGC...TACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKELHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACACTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: IIASAGRRWSESQVKNVWLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...CCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGATCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAAAGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAACAGCAAACAGCACGTaGAAAGGTGCAGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: ERRWRIRQEARRPVKTMATANST*KGAEVC
Trigger: GCACACCTCTGCACCTTTGCACGTGCTGTTTGCTGT...TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGIRVSW*HRLDGR
Trigger: CCTCCCATCCAGTCTGTGGCACCAGCTAACACGGAT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAAGCAACAGCGGATACTaGAATCCCCAGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRSNSGY*NPQPCC
Trigger: ACAGCAGGGCTGGGGATTGCAGTATCCGCTGTTGCT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTCAATGAAGATTCAGTaGCAAACATGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQSMKIQ*QTWLAP
Trigger: TGGAGCCAGCCATGTTTGGCACTGAATCTTCATTGA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLRRGRK*LTETCS
Trigger: TGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCT...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQRRGRK*LTETCS
Trigger: TGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTESAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: IASAGRRWSESQVKNVWWVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...CCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGTCTTGGGCAGAGAGATTCTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RWSESQVKNVWWSWAERFSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...GAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTTGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RWRIRQEARRPVKTMAGVDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...AACTCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGACAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKRSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTCAGCAGGGGCAGGACTaGGAGCAGCAGCAACAGCGG +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLQQGQD*EQQQQR
Trigger: CCGCTGTTGCTGCTGCTCCCAGTCCTGCCCCTGCTG...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGATTCAGTGCCAAACATaGCTGGCTCCAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEIQCQT*LAPEAA
Trigger: AGCAGCCTCTGGAGCCAGCCATGTTTGGCACTGAAT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGATTCAGTGCCAAACATaGCTGGCTCCAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWIQCQT*LAPEAA
Trigger: AGCAGCCTCTGGAGCCAGCCATGTTTGGCACTGAAT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATACAAGTGGCTTTCGTaGAGCGATCACGTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAYKWLS*SDHVAP
Trigger: AGGGGCCACGTGATCGCTCCACGAAAGCCACTTGTA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393446.6
3UTR CAA 72 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAF*RSTRSWHRGDG
Trigger: ACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAADLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKISSGN*CVRRAS
Trigger: GCTGGCCCTCCTGACACATCAGTTCCCGGAACTTAT...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CAACAAGGACCTAGACTAAGAGGGATGCTTTGGGAAAAGGAGGGAAAGAAGAGGTGCAATTCCAGTCCCTaGACTCTGCCGAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: QQGPRLRGMLWEKEGKKRCNSSP*TLPSRK
Trigger: TTTTCTGCTCGGCAGAGTTCAGGGACTGGAATTGCA...CCTCTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAGTCTAGGTCCTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAAATCCACTAGGCAAATaGAGGCCGACGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRNPLGK*RPTCLF
Trigger: GAAGAGGCACGTCGGCCTTCATTTGCCTAGTGGATT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACGTGAGAGTGAAGAGATaGGCCGGCTACACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHVRVKR*AGYTAG
Trigger: CCCTGCTGTGTAGCCGGCTCATCTCTTCACTCTCAC...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGTTCAGCGCTCCTCTCTaGTGCCGCGGCTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: CAIQKDHSCVSIKERRWRFSAPL*CRGSWC
Trigger: ACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAA...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELALHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTESHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCAGCCCCCGCCGAGATaGAGCCTCAGGAGAGAATTT +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHQPPPR*SLRREF
Trigger: AAATTCTCTCCTGAGGCTGCATCTCGGCGGGGGCTG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GTGCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: VPSHVQCKRFKAPSTLFQKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...CTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAGCTGTGTCCAGCTaGCAGATTCTCCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWQAVSS*QILLLR
Trigger: TCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTG...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACAAGCTGTGTCCAGCTaGCAGATTCTCCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRQAVSS*QILLLR
Trigger: TCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACAAGCTGTGTCCAGCTaGCAGATTCTCCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRQAVSS*QILLLR
Trigger: TCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWRRGRK*LTETCS
Trigger: TGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GATCCACTATGGCTGAAGAGCAGTGACTGTGCAAGAGTTGGGAGAGCTAAGGCTGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: DPLWLKSSDCARVGRAKAVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...AGCCTTAGCTCTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCATAGTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp CCCAGAAGGGGGCGCAAGTGGCTTACTGAGACTTGTTCAATGAATGAAGTTCCGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PRRGRKWLTETCSMNEVPQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CGGAACTTCATTCATTGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELASAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: IIASAGRRWSESQVKNVWAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...CCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELASSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCAGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCADFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR CCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCAGATCCGTGTTAGCTaGTGCCACAGACTGGATGGG +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKQIRVS*CHRLDG
Trigger: CCCATCCAGTCTGTGGCACCAGCTAACACGGATCTG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCGGTCCACAAGGAGTTaGCACAGAGGAGATGGTGGC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHRSTRS*HRGDGG
Trigger: GCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGAGTGCCAAACATGGCTaGCTCCAGAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKESAKHG*LQRLLF
Trigger: AAAAAGCAGCCTCTGGAGCCAGCCATGTTTGGCACT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAAGTGCCAAACATGGCTaGCTCCAGAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRSAKHG*LQRLLF
Trigger: AAAAAGCAGCCTCTGGAGCCAGCCATGTTTGGCACT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR CCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAATTCAGTGCCAAACATaGCTGGCTCCAGAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRIQCQT*LAPEAA
Trigger: AGCAGCCTCTGGAGCCAGCCATGTTTGGCACTGAAT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAAGGTCCCTACAAGTaGCTTTCGTGGAGCGATCAC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGKGPYK*LSWSDH
Trigger: GTGATCGCTCCACGAAAGCCACTTGTAGGGACCTTT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS-3UTR CCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGACTGACGAACCGTTCTaGGGAAGCCTCCTGCCATGT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKTDEPF*GSLLPC
Trigger: ACATGGCAGGAGGCTTCCCCAGAACGGTTCGTCAGT...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAATGAAACGGCTCCCTaGACTGACGAACCGTTCTGG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELANETAP*TDEPFW
Trigger: CCAGAACGGTTCGTCAGTCCAGGGAGCCGTTTCATT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GATCCACTATGGCTGAAGAGCAGTGACTGTGCAAGAGTTGGGAGAGCTAAGGCTCCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: DPLWLKSSDCARVGRAKAPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...AGCCTTAGCTCTCCCAACTCTTGCACAGTCACTGCTCTTCAGCCATAGTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCATTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: LQGFMSCRNPSLGVSLSPLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp GAAGAGGCATTAGTAGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCAGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: EEALVEWMSRVVTVKGIPGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...TGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCTACTAATGCCTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACGAGGGAAAGAAGAGGTaGATCACATTTACTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHEGKKR*ITFTEG
Trigger: GCCTTCAGTAAATGTGATTCACCTCTTCTTTCCCTC...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACACACAGCAGGGGTCATaGAGCCAGACAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHTQQGS*SQTMQS
Trigger: GGACTGCATTGTCTGGCTTCATGACCCCTGCTGTGT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp AATTTAGTGGATTTCGCCATACTTTGCATTCTGAGACACTTTGCCTATTGGAATGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCC +
Preference number: 4 (lower is better)
Translates to: NLVDFAILCILRHFAYWNAALGV*RDDSPA
Trigger: GGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGC...ATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp CTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTAATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLSSGYVLGVGLSFSFLVMQDLS*SRKPVA
Trigger: GGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCAT...TACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTESLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGATTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELASHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGCCTCAGGAGAGAATTTGTCAGAGACAGCTCTTGCTTTGAGCAAAGCAGCTGTGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLRREFVRDSSCFEQSSCVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323984.8
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAAAGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: ERRWRIRQEARRPVKTMAKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATGTCAATCATAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHVNHSF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTATGATTGAC...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp CAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCCAGTCCCTGAACTCTaGCGAGCAGAAAATGTCAAT +
Preference number: 4 (lower is better)
Translates to: QSLGDTEIMKTPFCSQGAPVPEL*RAENVN
Trigger: ATTGACATTTTCTGCTCGGCAGAGTTCAGGGACTGG...AGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTATGAGCAAGGCACTGTaGAAAGCCTTGGGGATACAG +
Preference number: 4 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIMSKAL*KALGIQ
Trigger: CTGTATCCCCAAGGCTTTGCACAGTGCCTTGCTCAT...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCTGAGGAAAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRAEESF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGCTGAGGAAAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEAEESF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAGCAACAGCGGATACTaGAATCCCCAGCCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHSNSGY*NPQPCC
Trigger: ACAGCAGGGCTGGGGATTGCAGTATCCGCTGTTGCT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR CCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGACAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLCTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGACTAAGAGGGATGCTTTaGGAAAAGGAGGGAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGLRGML*EKEGKK
Trigger: CTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAG...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACGACCAGTTAAGACTATaGCAGGAGTTCAGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHDQLRL*QEFRQE
Trigger: TTCTTGCCTGAACTCCTGCCATAGTCTTAACTGGTC...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGTTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAAGTGCCAAACATGGCTaGCTCCAGAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGSAKHG*LQRLLF
Trigger: AAAAAGCAGCCTCTGGAGCCAGCCATGTTTGGCACT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCG +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQKLCRT*AAPESP
Trigger: CGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GAAGAGGCATTAGTAGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: EEALVEWMSRVVTVKGIPLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...TGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCTACTAATGCCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GTGCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VPSHVQCKRFKAPSTLFQGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp GTGCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: VPSHVQCKRFKAPSTLFQFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...CTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTCTCCCGGTGTGATTaGAATGCAAGGTCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSFSRCD*NARSLN
Trigger: GTTAAGAGACCTTGCATTTCAATCACACCGGGAGAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTTCTCCCGGTGTGATTaGAATGCAAGGTCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWFSRCD*NARSLN
Trigger: GTTAAGAGACCTTGCATTTCAATCACACCGGGAGAA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAAGTTTTCTCCCGGTGTaGTTGAAATGCAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTSFLPV*LKCKVS
Trigger: AGAGACCTTGCATTTCAATCACACCGGGAGAAAACT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CATGATGTTGTAGCTGCTGAGAGCGTCGGTAACAGCCATCTCCAGCCTTCAGGGATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: HDVVAAESVGNSHLQPSGMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...CCCTGAAGGCTGGAGATGGCTGTTACCGACGCTCTCAGCAGCTACAACATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCTGCATTATTGCATCTaGGGGACGCAGATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHLHYCI*GTQMVR
Trigger: TCGGACCATCTGCGTCCCGCAGATGCAATAATGCAG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AGCCTCAGGAGAGAATTTGTCAGAGACAGCTCTTGCTTTGAGCAAAGCAGCTGTATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLRREFVRDSSCFEQSSCMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CAACAAGGACCTAGACTAAGAGGGATGCTTTGGGAAAAGGAGGGAAAGAAGAGGCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: QQGPRLRGMLWEKEGKKRPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...CCTCTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAGTCTAGGTCCTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323984.8
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCACCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCAPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAAGCAGCTCTCGGTCTaGTGTTTCTGTACAGATTGG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAKQLSV*CFCTDW
Trigger: CCAATCTGTACAGAAACAGCAGACCGAGAGCTGCTT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGCTGAGGAAAGCTTTTaGGAAGACCCCCATAAGTTC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAAEESF*EDPHKF
Trigger: GAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTERHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTENVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SETLCLLESESPLLELELSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...CAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTCTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSCTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGCTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWCTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAATCCTCCCGAGTCTTCTaGCACACATTGCTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQSSRVF*HTLLAF
Trigger: GAAGGCTAGCAATGTGTGCCAGAAGACTCGGGAGGA...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACTTTTCACTGCTTCCCTaGTCCTCCCGAGTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHFSLLP*SSRVFW
Trigger: CCAGAAGACTCGGGAGGACCAGGGAAGCAGTGAAAA...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTACCAGGAATAGCACGATaGAGAACCACACGGTCCACA +
Preference number: 4 (lower is better)
Translates to: LLSSGYVLGVGLSFSFLVPGIAR*RTTRST
Trigger: TGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGG...TACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp TTTGTCAGAGACAGCTCTTGCTTTGAGCAAAGCAGCTGTGTAGCATATTGTTGCTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: FVRDSSCFEQSSCVAYCCCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...GCAACAATATGCTACACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: TVQELGELRLRGKQGPDHDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGATTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CAAGACATTGGTGTCTCGTCTATGTTGGGCTTCATACTGGGATCCATGATGTTGTTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: QDIGVSSMLGFILGSMMLLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...CAACATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACACCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKELLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTTGCTAGCCTTCTTTTaGTGTACACCAAGACATTGG +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWLLAFF*CTPRHW
Trigger: CCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACCGAAGAGCTGCTTTTaGAAATCCACTAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAPKSCF*KSTRQM
Trigger: CATTTGCCTAGTGGATTTTCAAAAGCAGCTCTTCGG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACCGAAGAGCTGCTTTTaGAAATCCACTAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRPKSCF*KSTRQM
Trigger: CATTTGCCTAGTGGATTTTCAAAAGCAGCTCTTCGG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGATTCTCCCGGTGTGATTaGAATGCAAGGTCTCTTAAC +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRFSRCD*NARSLN
Trigger: GTTAAGAGACCTTGCATTTCAATCACACCGGGAGAA...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAAGTTTTCTCCCGGTGTaGTTGAAATGCAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGSFLPV*LKCKVS
Trigger: AGAGACCTTGCATTTCAATCACACCGGGAGAAAACT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAAGTTTTCTCCCGGTGTaGTTGAAATGCAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRSFLPV*LKCKVS
Trigger: AGAGACCTTGCATTTCAATCACACCGGGAGAAAACT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTACACAGCAGGGGTCATaGAGCCAGACAATGCAGTCC +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLTQQGS*SQTMQS
Trigger: GGACTGCATTGTCTGGCTTCATGACCCCTGCTGTGT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGATTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACTCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAATCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323984.8
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAGAAGGGGGCGCAAGTaGCTTACTGAGACTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHRRGRK*LTETCS
Trigger: TGAACAAGTCTCAGTAAGCCACTTGCGCCCCCTTCT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELARHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELANVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELACTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACTGTGCAAAGCCTTaGGGATACAGAGATAATGAA +
Preference number: 4 (lower is better)
Translates to: QSLGDTEIMKTPFCSQGAHCAKP*GYRDNE
Trigger: TTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTG...AGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTCAAAAACATGCTCATaGGCTTTTTGTGGGAGTATT +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWSKTCS*AFCGSI
Trigger: AATACTCCCACAAAAAGCCCATGAGCATGTTTTTGA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393443.5
3UTR CAA 72 bp CTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATaGTTGGAAGAGTTGTTGTCAACCCCTCCCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LLESESPLLELE*LEELLSTPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCA +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHCSSCR*FSKAPA
Trigger: TGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCA...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR TCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTELRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGGTTTTCATGGATATTaGACATACTCAGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAGFHGY*TYSEGG
Trigger: TCCCCCTTCTGAGTATGTTCAATATCCATGAAAACC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CAACAAGGACCTAGACTAAGAGGGATGCTTTGGGAAAAGGAGGGAAAGAAGAGGCATCTTCAACACGCATaGAAATACTCTTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: QQGPRLRGMLWEKEGKKRHLQHA*KYSCNS
Trigger: GGAATTGCAAGAGTATTTTCATGCGTGTTGAAGATG...CCTCTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAGTCTAGGTCCTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTGTGAATCACATTTACTaGAGGCCTAGTTGCTTAGGA +
Preference number: 4 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIVNHIY*RPSCLG
Trigger: TCCTAAGCAACTAGGCCTTCAGTAAATGTGATTCAC...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp CGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTTCTGAGTATAAAAGAATaGAGAGGCATTAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: RWRIRQEARRPVKTMAGVLSIKE*RGISRV
Trigger: CACTCTACTAATGCCTCTTCATTCTTTTATACTCAG...AACTCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGACATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELADFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CATTCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: HSETLCLLESESPLLELESLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...TTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTCAGAGACAGCTCTTaGTTTGAGCAAAGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQVRDSS*FEQSSC
Trigger: ACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGAC...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323984.8
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAAAAGTCATGCTTTCTTaGGGTCCACAAGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQKVMLS*GPQGVG
Trigger: GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGAGACTTCATGGAAAGTaGCTTCCCACGTACAATGCA +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKRLHGK*LPTYNA
Trigger: TGCATTGTACGTGGGAAGGCACTTTCCATGAAGTCT...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS-3UTR GCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACCCAATGCATCAACCTaGAGGAAACCTTACTATGTT +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRPNAST*RKPYYV
Trigger: AACATAGTAAGGTTTCCTGCAGGTTGATGCATTGGG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTTCTGCGGGACGCAGATaGTCCGAGTCACAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLSAGRR*SESQVK
Trigger: CTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGA...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTGTCTCGTCTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQVSRLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGACGAGACAC...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAAAGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAATAAAAGAAAGACGGTaGAGGATAAGACAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: ERRWRIRQEARRPVKTMAIKERR*RIRQEA
Trigger: TGCTTCCTGTCTTATCCTCCACCGTCTTTCTTTTAT...TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
3UTR CAA 72 bp CACATTGCTAGCCTTCTTTTGATGTACACCAAGACATaGGTGTCTCGTCTATGTTGGGCTTCATACTGGGAT +
Preference number: 4 (lower is better)
Translates to: HIASLLLMYTKT*VSRLCWASYWD
Trigger: ATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTGGTGTACATCAAAAGAAGGCTAGCAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTTTGCTAAGACTGCCTaGACATCAGCATATGCTTGT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKFAKTA*TSAYAC
Trigger: ACAAGCATATGCTGATGTTCAGGCAGTCTTAGCAAA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCATTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCAFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR TCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACACAAAAACATGCTCAATaGAGATTCAGTGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTQKHAQ*RFSAKH
Trigger: ATGTTTGGCACTGAATCTTCATTGAGCATGTTTTTG...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393444.7
ENST00000393447.8
CDS-3UTR TCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCAAAAACATGCTCAATaGAGATTCAGTGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWQKHAQ*RFSAKH
Trigger: ATGTTTGGCACTGAATCTTCATTGAGCATGTTTTTG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393444.7
ENST00000393447.8
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGATGTGTTCAAAAACATaGTCACTGTGCTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEMCSKT*SLCSSC
Trigger: ACAACTTGAGCACAGTGAGCATGTTTTTGAACACAT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCAATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCAMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHPSHVQ*KRFKAP
Trigger: AGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000323984.8
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTCAAGCTGTGTCCAGCTaGCAGATTCTCCTGTTACGA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLQAVSS*QILLLR
Trigger: TCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTG...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR CCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGAGACACTTTGCCTATTaGAATCTGAGTCCCCGTTAC +
Preference number: 4 (lower is better)
Translates to: SETLCLLESESPLLELELRHFAY*NLSPRY
Trigger: GTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCT...CAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp CATTCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAAGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: HSETLCLLESESPLLELEVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...TTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp AAAGGTTTATTTGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGLFGTSTILGLEDTGGYAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTGCAGAAATCCTAGCTTaGGGGTTTCTCTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLAEILA*GFLSLQ
Trigger: CTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGC...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGAGTGCCAAACATGGCTaGCTCCAGAGGCTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRRESAKHG*LQRLLF
Trigger: AAAAAGCAGCCTCTGGAGCCAGCCATGTTTGGCACT...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCTCATGGGCTTTTTGTaGGAGTATTCACATTTCTTT +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGLMGFL*EYSHFF
Trigger: AAAGAAATGTGAATACTCCCACAAAAAGCCCATGAG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAACCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAATCTGGGAATGGTGAGTaGTCCACTATGGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKSGNGE*STMAEE
Trigger: CTCTTCAGCCATAGTGGATCACTCACCATTCCCAGA...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACAAAAACATGCTCAATaGAGATTCAGTGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRQKHAQ*RFSAKH
Trigger: ATGTTTGGCACTGAATCTTCATTGAGCATGTTTTTG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: CAIQKDHSCVSIKERRWRILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GAAAGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: ERRWRIRQEARRPVKTMAMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SETLCLLESESPLLELELHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...CAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: SETLCLLESESPLLELELDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...CAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTTCTCTCCAGGCTTTCTaGATTATTGCATCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLSLQAF*IIASAG
Trigger: TCCCGCAGATGCAATAATGCAGAAAGCCTGGAGAGA...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp TACCGATTGTATTCAGCACCCCTAAATAAATTTAGTGGATTTCGCCATACTTTGTCTCATCATTTTCACTaGTTCCCTGGTCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: YRLYSAPLNKFSGFRHTLSHHFH*FPGPPE
Trigger: CTCGGGAGGACCAGGGAAGCAGTGAAAATGATGAGA...CAAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR GCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTATTCTGATCCCCCAATaGATCAACCTGCAGGAAACC +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLILIPQ*INLQET
Trigger: GGTTTCCTGCAGGTTGATGCATTGGGGGATCAGAAT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGTCCCTGGGAATCCACTaGAGAAATTTAAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: CAIQKDHSCVSIKERRWRSLGIH*RNLSRE
Trigger: TTCCCTGCTTAAATTTCTCCAGTGGATTCCCAGGGA...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CCA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR TCA 90 bp TCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGCTGAGACTTGTTCAATaGATGAAGTTCCGTATTTGC +
Preference number: 4 (lower is better)
Translates to: SETLCLLESESPLLELELLRLVQ*MKFRIC
Trigger: GCAAATACGGAACTTCATTCATTGAACAAGTCTCAG...CAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTTTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGATATTAGTGAGGAAGTaGCTGTTAGGGCCACGTAGA +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREILVRK*LLGPRR
Trigger: TCTACGTGGCCCTAACAGGCACTTCCTCACTAATAT...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTTTCAGCAATGGTTGTTaGTTCCTCTTCAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLFSNGC*FLFSQE
Trigger: CTCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAA...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp TGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGATATGAATGGCCTCTACTaGATTCATCTCTGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: CNSERPFLCQYKRKTVEDMNGLY*IHLCCA
Trigger: AGCACAGCAGAGATGAATGCAGTAGAGGCCATTCAT...ATCCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR GCA 90 bp CAAGACATTGGTGTCTCGTCTATGTTGGGCTTCATACTGGGATCCATGATGTTGGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: QDIGVSSMLGFILGSMMLENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...CAACATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAGAGAATATAAGCAGTTaGACACTCATTTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRENISS*TLIYLQ
Trigger: TTGGAGATAAATGAGTGTGCAACTGCTTATATTCTC...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTTCAATGAAGATTCAGTaGCAAACATGGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLSMKIQ*QTWLAP
Trigger: TGGAGCCAGCCATGTTTGGCACTGAATCTTCATTGA...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp CCCCTAAATAAATTTAGTGGATTTCGCCATACTTTGCATTCTGAGACACTTTGCAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: PLNKFSGFRHTLHSETLCNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTAAATTTATTTAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTAATGTCTGGTGGTCTTaGGCAGAGAGATTCATGTCA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLNVWWS*AERFMS
Trigger: TGACATGAATCTCTCTGCCCAAGACCACCAGACATT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGGTAAAGAATGTCTGGTaGTCTTGGGCAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREVKNVW*SWAERF
Trigger: GAATCTCTCTGCCCAAGACCACCAGACATTCTTTAC...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGCAAGTAAAGAATGTCTaGTGGTCTTGGGCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREQVKNV*WSWAER
Trigger: TCTCTCTGCCCAAGACCACCAGACATTCTTTACTTG...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp ATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACAAATGATTGCTGTAATAGACTTCATGGAAAGATaGAAGCAGCTCTCGGTCTGC +
Preference number: 4 (lower is better)
Translates to: INNFRVGRHRRIQMIAVIDFMER*KQLSVC
Trigger: GCAGACCGAGAGCTGCTTCCATCTTTCCATGAAGTC...TATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CCA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATTTAAAATCTCGGAATaGCTTCCCTTTTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAFKISE*LPFFKV
Trigger: GACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAAA...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGATAACTAGGAGCTCATaGCTCTTTCTCTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREITRSS*LFLSGS
Trigger: GCTTCCAGAGAGAAAGAGCCATGAGCTCCTAGTTAT...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp CATTCTGAGACACTTTGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAAGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: HSETLCLLESESPLLELEDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...TTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR TCA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAATTGCCTATTGGAATCTaGGTCCCCGTTACTGGAATT +
Preference number: 4 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKLPIGI*VPVTGI
Trigger: AATTCCAGTAACGGGGACTCAGATTCCAATAGGCAA...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGCCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp ATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACAAATGATTGCTGTAATAATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCT +
Preference number: 4 (lower is better)
Translates to: INNFRVGRHRRIQMIAVIISKAS*AAEILA
Trigger: AGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGAT...TATTACAGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR GCA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACATGTGTTCAAAAACATaGTCACTGTGCTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHMCSKT*SLCSSC
Trigger: ACAACTTGAGCACAGTGAGCATGTTTTTGAACACAT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAATGTGTTCAAAAACATaGTCACTGTGCTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQMCSKT*SLCSSC
Trigger: ACAACTTGAGCACAGTGAGCATGTTTTTGAACACAT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR GCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGCATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp AAAGGTTTATTTGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: KGLFGTSTILGLEDTGGYDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR GCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGGATTTCGCCATACTTTaGATTCTGAGACACTTTGCC +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREDFAIL*ILRHFA
Trigger: GGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATC...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp AAAGGTTTATTTGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACCCTTTTTCAAAGTCATaGTTTCTTGCGGTCCACAAG +
Preference number: 4 (lower is better)
Translates to: KGLFGTSTILGLEDTGGYPFSKS*FLAVHK
Trigger: CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG...GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CCA 90 bp TACCGATTGTATTCAGCACCCCTAAATAAATTTAGTGGATTTCGCCATACTTTGTGTACACCAAGACATTaGTGTCTCGTCTATGTTGGG +
Preference number: 4 (lower is better)
Translates to: YRLYSAPLNKFSGFRHTLCTPRH*CLVYVG
Trigger: CCCAACATAGACGAGACACCAATGTCTTGGTGTACA...CAAAGTATGGCGAAATCCACTAAATTTATTTAGGGGTGCTGAATACAATCGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTGAAACCTTACTATGTTaGGCTTCATACTGGGATCCA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLETLLC*ASYWDP
Trigger: TGGATCCCAGTATGAAGCCCAACATAGTAAGGTTTC...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGATGCAAAGATTTTGCTaGCACCTTAGTTATGGGGAC +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREMQRFC*HLSYGD
Trigger: GTCCCCATAACTAAGGTGCCAGCAAAATCTTTGCAT...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp AATTTAGTGGATTTCGCCATACTTTGCATTCTGAGACACTTTGCCTATTGGAATCCATACTTTGCATTCTaGGACACTTTGCCTATTGGA +
Preference number: 4 (lower is better)
Translates to: NLVDFAILCILRHFAYWNPYFAF*DTLPIG
Trigger: TCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGG...ATTCCAATAGGCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCCACTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR GCA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAACATTCTGAGACACTTTaGCTATTGGAATCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKHSETL*LLESES
Trigger: GGACTCAGATTCCAATAGGCAAAGTGTCTCAGAATG...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp TGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACAAATGATTGCTATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: WDINNFRVGRHRRIQMIAMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...AGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTATGGCTCTTTCTCTCTaGAAGCCAATACCAATGTTT +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLMALSL*KPIPMF
Trigger: AAACATTGGTATTGGCTTCCAGAGAGAAAGAGCCAT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTGACTTGTTCAATGAATaGAGTTCCGTATTTGCGAAA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLDLFNE*SSVFAK
Trigger: TTTCGCAAATACGGAACTTCATTCATTGAACAAGTC...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR TCA 90 bp TGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGATTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: CNSERPFLCQYKRKTVEDFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...ATCCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR TCA 90 bp AAAGGTTTATTTGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACTTCCAGTGTGCAAGATaGAAGAATGCATATGCTATT +
Preference number: 4 (lower is better)
Translates to: KGLFGTSTILGLEDTGGYFQCAR*KNAYAI
Trigger: AATAGCATATGCATTCTTTCATCTTGCACACTGGAA...GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR GCA 90 bp TGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGATATGAAAGAATGCATATaGTATTGCTTCACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CNSERPFLCQYKRKTVEDMKECI*YCFTVS
Trigger: GGAGACAGTGAAGCAATAGCATATGCATTCTTTCAT...ATCCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTATAATGCAAAGATTTTaGTGGCACCTTAGTTATGGG +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLIMQRF*WHLSYG
Trigger: CCCATAACTAAGGTGCCAGCAAAATCTTTGCATTAT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAATGTGTTCAAAAACATaGTCACTGTGCTCAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKMCSKT*SLCSSC
Trigger: ACAACTTGAGCACAGTGAGCATGTTTTTGAACACAT...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR GCA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTATGAAGTTCCGTATTTaGGAAAATACCACCATTCAA +
Preference number: 4 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLMKFRI*ENTTIQ
Trigger: TTGAATGGTGGTATTTTCGCAAATACGGAACTTCAT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR GCA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGGGACTGCTAAATTTCTaGTTCAACAACAAACAAACT +
Preference number: 4 (lower is better)
Translates to: IISNMKEIHPYSLSFRREGLLNF*FNNKQT
Trigger: AGTTTGTTTGTTGTTGAAGCAGAAATTTAGCAGTCC...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS GCA 90 bp AGCCATGTTTCAGCGCTCCTCTCTGCTGCCGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCCCGGAGGCGCAGCTCGCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: SHVSALLSAAAALGV*RDDSPARRRSSRRR
Trigger: GCGGCGGCGCGAGCTGCGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAAACATGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265437.9
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000438863.5
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS GCA 90 bp CAGCCTCAGGAGAGAATCTCACACCCAGGGCTAACTCCAGAGCTGTaGTTGGCAGGCAGACACCACAGGGGAAGCTGTGACAACCCTGGC +
Preference number: 5 (lower is better)
Translates to: QPQERISHPGLTPEL*LAGRHHRGSCDNPG
Trigger: GCCAGGGTTGTCACAGCTTCCCCTGTGGTGTCTGCCTGCCAAGCACAGCTCTGGAGTTAGCCCTGGGTGTGAGATTCTCTCCTGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487459.5
ENST00000543837.5
CDS CCA 90 bp CACCACAGGGGAAGCTGTGACAACCCTGGCCCTGCCCTCCCAAGCTaGAGTCGCTGTGTAGGGAGAAAAGATGTTGCAGTAGGTACTGGC +
Preference number: 5 (lower is better)
Translates to: HHRGSCDNPGPALPS*SRCVGRKDVAVGTG
Trigger: GCCAGTACCTACTGCAACATCTTTTCTCCCTACACAGCGACTCCAGCTTGGGAGGGCAGGGCCAGGGTTGTCACAGCTTCCCCTGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487459.5
ENST00000543837.5
CDS-3UTR CAA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS CCA 90 bp GAAGGCAGTGGGTCTGAGTGGAGTTTGATCCTGCCAGTGCCCAAGTaGCCAGCTGACTCCAGCGCTCATGCACTCCAGTTCCTACCTTGT +
Preference number: 5 (lower is better)
Translates to: EGSGSEWSLILPVPK*PADSSAHALQFLPC
Trigger: ACAAGGTAGGAACTGGAGTGCATGAGCGCTGGAGTCAGCTGGCCACTTGGGCACTGGCAGGATCAAACTCCACTCAGACCCACTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420755.5
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGTGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS GCA 90 bp ACGGTCCACAGATACGTCCAAGACCAAACTATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCCGCTTCAGCCATGTTTCAGCGCTCC +
Preference number: 5 (lower is better)
Translates to: TVHRYVQDQTMQDLS*SRKPVAASAMFQRS
Trigger: GGAGCGCTGAAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000417919.5
ENST00000438863.5
ENST00000443979.5
ENST00000446490.5
CDS TCA 90 bp ACCACACGGTCCACAGATACGTCCAAGACCAAACTATGCAGGACTTaGGCTGCTCCAGAAAGCCCGTGGCCGCTTCAGCCATGTTTCAGC +
Preference number: 5 (lower is better)
Translates to: TTRSTDTSKTKLCRT*AAPESPWPLQPCFS
Trigger: GCTGAAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000417919.5
ENST00000438863.5
ENST00000443979.5
ENST00000446490.5
CDS GCA 90 bp GAAGAGATGAGCCGGCTACACAGCAGGGGTCATGAAGCCAGACAATaGAGTCCAAGCTGTGTCCAGCTGCCAGATTCTCCTGTTACGAGC +
Preference number: 5 (lower is better)
Translates to: EEMSRLHSRGHEARQ*SPSCVQLPDSPVTS
Trigger: GCTCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTGGACTGCATTGTCTGGCTTCATGACCCCTGCTGTGTAGCCGGCTCATCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS GCA 90 bp AGGCCTGAAGGGACACTGAGGGTCCTCAAGGCCAAGGCATTGAGGTaGCACTGTTATACTCTCTGGTTGTCCTTCTTCAGGCTAGGGTGG +
Preference number: 5 (lower is better)
Translates to: RPEGTLRVLKAKALR*HCYTLWLSFFRLGW
Trigger: CCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACAGTGGCACCTCAATGCCTTGGCCTTGAGGACCCTCAGTGTCCCTTCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS-3UTR CAA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACCTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATT +
Preference number: 5 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHLLPRL*VSAGMI
Trigger: AATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAG...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS GCA 90 bp GTACCCCAAGCAGCTACAAGCTGCAGAATCCCTGAAGACAATAGCTaGAGCCAGAACATGCTAGAGCCTCCCCTCAAATCTGGAGGCCTG +
Preference number: 5 (lower is better)
Translates to: VPQAATSCRIPEDNS*SQNMLEPPLKSGGL
Trigger: CAGGCCTCCAGATTTGAGGGGAGGCTCTAGCATGTTCTGGCTGCAGCTATTGTCTTCAGGGATTCTGCAGCTTGTAGCTGCTTGGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATT +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTELLPRL*VSAGMI
Trigger: AATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAARLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GAAAGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGGAGGAGCAGTTTaGGTGGTGGGGGAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: ERRWRIRQEARRPVKTMAGGGAV*VVGEEG
Trigger: CCCCTCTTCCCCCACCACCAAAACTGCTCCTCCTCC...TGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS GCA 90 bp GCAGGGGTCATGAAGCCAGACAATGCAGTCCAAGCTGTGTCCAGCTaGCAGATTCTCCTGTTACGAGCTTCAGTTTTCTCCCGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: AGVMKPDNAVQAVSS*QILLLRASVFSRCD
Trigger: ATCACACCGGGAGAAAACTGAAGCTCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTGGACTGCATTGTCTGGCTTCATGACCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS CCA 90 bp AGGGTCCTCAAGGCCAAGGCATTGAGGTGCCACTGTTATACTCTCTaGTTGTCCTTCTTCAGGCTAGGGTGGCCCAAGAAGCACCTGTTA +
Preference number: 5 (lower is better)
Translates to: RVLKAKALRCHCYTL*LSFFRLGWPKKHLL
Trigger: TAACAGGTGCTTCTTGGGCCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACAGTGGCACCTCAATGCCTTGGCCTTGAGGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGACTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATT +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGLLPRL*VSAGMI
Trigger: AATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAG...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp ATTTATCTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCCTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATT +
Preference number: 5 (lower is better)
Translates to: IYLQGFMSCRNPSLGVSLLLPRL*VSAGMI
Trigger: AATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAG...GAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS TCA 90 bp GTGCTGAGGAAAGCTTTTGCGAAGACCCCCATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGCATGGCTGTGAAGGAACATAATCCA +
Preference number: 5 (lower is better)
Translates to: VLRKAFAKTPISSGN*CVRRASMAVKEHNP
Trigger: TGGATTATGTTCCTTCACAGCCATGCTGGCCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTTTCCTCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp GCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGCGGGAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: AFLRSTRSWHRGDGGSGGNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...CCCGCCGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCGGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: VMLSCGPQGVGTEEMVAAGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...CGCTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS CCA 90 bp AACTCTCTAAAGGTCCCTACAAGTGGCTTTCGTGGAGCGATCACGTaGCCCCTGCCCCCTCGCGTTCTGGGTCCATTTATATTTATTATG +
Preference number: 5 (lower is better)
Translates to: NSLKVPTSGFRGAIT*PLPPRVLGPFIFIM
Trigger: CATAATAAATATAAATGGACCCAGAACGCGAGGGGGCAGGGGCCACGTGATCGCTCCACGAAAGCCACTTGTAGGGACCTTTAGAGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: IASAGRRWSESQVKNVWWRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...CCACCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS CCA 90 bp AGGTGCCACTGTTATACTCTCTGGTTGTCCTTCTTCAGGCTAGGGTaGCCCAAGAAGCACCTGTTAATGCATGTTTCTAGGCAGCCTCTA +
Preference number: 5 (lower is better)
Translates to: RCHCYTLWLSFFRLG*PKKHLLMHVSRQPL
Trigger: TAGAGGCTGCCTAGAAACATGCATTAACAGGTGCTTCTTGGGCCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACAGTGGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS-3UTR CAA 90 bp TCTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTCTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATT +
Preference number: 5 (lower is better)
Translates to: SPLFRICSGGRIKLFISSLLPRL*VSAGMI
Trigger: AATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAG...ACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR CAA 90 bp AGTAAGAGGCTCTCGTCCTGTCACCCAAGTATACCGATTGTATTCAGCACCCCTGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: SKRLSSCHPSIPIVFSTPVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...AGGGGTGCTGAATACAATCGGTATACTTGGGTGACAGGACGAGAGCCTCTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp GTGCCTTCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: VPSHVQCKRFKAPSTLFQVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...CTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGCTCACTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQLTVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGTGAG...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp ACTGTGCAAGAGTTGGGAGAGCTAAGGCTGAGAGGTAAGCAAGGGCCAGATCATGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: TVQELGELRLRGKQGPDHETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...ATGATCTGGCCCTTGCTTACCTCTCAGCCTTAGCTCTCCCAACTCTTGCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGTGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCACTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: LQGFMSCRNPSLGVSLSPLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCCTCAGGAGAGAATTTGTCAGAGACAGCTCTTGCTTTGAGCAAAGCAGCTGTGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: ASGENLSETALALSKAAVASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CACAGCTGCTTTGCTCAAAGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACGCGGTCCACAAGGAGTaGGCACAGAGGAGATGGTGG +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHAVHKE*AQRRWW
Trigger: CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGC...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS TCA 90 bp ATGTCAATCATAGCTTTTGCGAAGACCCCCATAAGTTCCGGGAACTaGTGTGTCAGGAGGGCCAGCATGGCTGTGAAGGAACATAATCCA +
Preference number: 5 (lower is better)
Translates to: MSIIAFAKTPISSGN*CVRRASMAVKEHNP
Trigger: TGGATTATGTTCCTTCACAGCCATGCTGGCCCTCCTGACACATCAGTTCCCGGAACTTATGGGGGTCTTCGCAAAAGCTATGATTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265437.9
ENST00000464020.1
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACATTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: IIASAGRRWSESQVKNVWLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...CCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: IIASAGRRWSESQVKNVWECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...CCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGAAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKECRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AGATGGTCCGAGTCACAAGTAAAGAATGTCTGGTGGTCTTGGGCAGAGAGATTCTGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RWSESQVKNVWWSWAERFCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...GAATCTCTCTGCCCAAGACCACCAGACATTCTTTACTTGTGACTCGGACCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTTATCTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: IYLQGFMSCRNPSLGVSLGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...GAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCAAAGTCATGCTTTCTaGCGGTCCACAAGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSQSHAF*RSTRSW
Trigger: CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTAGAGGGAAAGGCTTaGGCATCTGTCCTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSLEGKA*ASVLSS
Trigger: TGAGCTCAGGACAGATGCCAAAGCCTTTCCCTCTAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGTGCTCAAGTTGTCGTaGATTTTCAAAGGCACCCGC +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAVLKLS*IFKGTR
Trigger: GCGGGTGCCTTTGAAAATCAACGACAACTTGAGCAC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp AGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACCTCACTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SLGDTEIMKTPFCSQGAHLTVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGTGAG...GTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGATTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: IIASAGRRWSESQVKNVWETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...CCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp CGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTTGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: RWRIRQEARRPVKTMAGVGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...AACTCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGATGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGATGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp CAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: QSLGDTEIMKTPFCSQGALQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...AGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTELQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGACTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: PFSKSCFLAVHKELAQRRLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...TCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AGAGTGGATGAGCAGGGTGGTGACAGTGAAGGGCATTCCACGCACAGCAAACAGCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: RVDEQGGDSEGHSTHSKQLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...CTGTTTGCTGTGCGTGGAATGCCCTTCACTGTCACCACCCTGCTCATCCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS TCA 90 bp GGAACTTCAACTCTGGACCTAATTTCATTTATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCAGGCT +
Preference number: 5 (lower is better)
Translates to: GTSTLDLISFISKAS*AAEILAWGFLSLQA
Trigger: AGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAATGAAATTAGGTCCAGAGTTGAAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
ENST00000487459.5
ENST00000490039.1
CDS TCA 90 bp TGCCAGATTCTCCTGTTACGAGCTTCAGTTTTCTCCCGGTGTGATTaGAATGCAAGGTCTCTTAACAGCACCAAAAACCGAAGAGCTGCT +
Preference number: 5 (lower is better)
Translates to: CQILLLRASVFSRCD*NARSLNSTKNRRAA
Trigger: AGCAGCTCTTCGGTTTTTGGTGCTGTTAAGAGACCTTGCATTTCAATCACACCGGGAGAAAACTGAAGCTCGTAACAGGAGAATCTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS-3UTR CAA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCCTCACTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGLTVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGTGAG...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTCACTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWLTVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGTGAG...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
CDS-3UTR CAA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AGGCACTGTGCAAAGCCTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: RHCAKPWGYRDNEDTVLLTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...GAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAGGCTTTGCACAGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGTGTCTCGTCTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQGVSSM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGACGAGACACC...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: EWLPFFKVMLSCGPQGVGMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...GCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCTGGATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: IIASAGRRWSESQVKNVWMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...CCAGACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp AGACGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: RRWRIRQEARRPVKTMAGRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...TCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGCCTCAGGAGAGAATTaGTCAGAGACAGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKASGEN*SETALA
Trigger: AGCAAGAGCTGTCTCTGACAAATTCTCTCCTGAGGC...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCAGAGAGAATATAAGCAGTaGCACACTCATTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: KSCFLAVHKELAQRRWWQREYKQ*HTHLSP
Trigger: TGGAGATAAATGAGTGTGCAACTGCTTATATTCTCT...CTGCCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS GCA 90 bp TTCAACTCTGGACCTAATTTCATTTATCTCCAAGGCTTCATGAGCTaGAGAAATCCTAGCTTGGGGGTTTCTCTCTCTCCAGGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FNSGPNFIYLQGFMS*RNPSLGVSLSPGFL
Trigger: CAGAAAGCCTGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAATGAAATTAGGTCCAGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
ENST00000487459.5
ENST00000490039.1
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAATTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKETQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACTGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAAGCAGTTGCACACTTaGGTAACAATTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQKQLHT*VTILSP
Trigger: GGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: KSRNGFPFSKSCFLAVHKLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...CTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTGGGGATACAGAGATAATGAAGACACCGTTCTGCTCTCAAGGAGCTCACATTCGCATGAAAATACTCTaGCAATTCCAGTCCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LGDTEIMKTPFCSQGAHIRMKIL*QFQSLN
Trigger: GTTCAGGGACTGGAATTGCAAGAGTATTTTCATGCG...AATGTGAGCTCCTTGAGAGCAGAACGGTGTCTTCATTATCTCTGTATCCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGGTGACTGTGCAAGAGTaGGGAGAGCTAAGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: CAIQKDHSCVSIKERRWRVTVQE*GELRLR
Trigger: TCTCAGCCTTAGCTCTCCCAACTCTTGCACAGTCAC...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGATGCTCATGGGCTTTTaGTGGGAGTATTCACATTTC +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWMLMGF*WEYSHF
Trigger: GAAATGTGAATACTCCCACAAAAAGCCCATGAGCAT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR CAA 90 bp TCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGTGGAGAGAATATAAGCAGTaGCACACTCATTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: SKSCFLAVHKELAQRRWWREYKQ*HTHLSP
Trigger: TGGAGATAAATGAGTGTGCAACTGCTTATATTCTCT...CCACCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR CAA 90 bp CGGTGGAGGATAAGACAGGAAGCAAGGAGACCAGTTAAGACTATGGCAGGAGTTAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: RWRIRQEARRPVKTMAGVNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...AACTCCTGCCATAGTCTTAACTGGTCTCCTTGCTTCCTGTCTTATCCTCCACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp GGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: GFPFSKSCFLAVHKELAQNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...CTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGTTGTTGGAAGAGTTGTaGTCAACCCCTCCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: CAIQKDHSCVSIKERRWRLLEEL*STPPRR
Trigger: CCTTCTGGGAGGGGTTGACAACAACTCTTCCAACAA...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGAGACACTTTGCCTATaGGAATCTGAGTCCCCGTTA +
Preference number: 5 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQETLCL*ESESPL
Trigger: TAACGGGGACTCAGATTCCAATAGGCAAAGTGTCTC...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELATQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATTTATCTCCAAGGCTTCATGAGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: IYLQGFMSCRNPSLGVSLTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...GAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp TGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAGAAAGACGGTGGAGGTGCAGAAATCCTAGCTaGGGGGTTTCTCTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: CAIQKDHSCVSIKERRWRCRNPS*GVSLSP
Trigger: TGGAGAGAGAGAAACCCCCAAGCTAGGATTTCTGCA...CCTCCACCGTCTTTCTTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp CAACAAGGACCTAGACTAAGAGGGATGCTTTGGGAAAAGGAGGGAAAGAAGAGGAAGCAGTTGCACACTTaGGTAACAATTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: QQGPRLRGMLWEKEGKKRKQLHT*VTILSP
Trigger: GGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTT...CCTCTTCTTTCCCTCCTTTTCCCAAAGCATCCCTCTTAGTCTAGGTCCTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGAAGCAGTTGCACACTTaGGTAACAATTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKEKQLHT*VTILSP
Trigger: GGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTT...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHLQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGATCAACAATTTTAGGGTaGGAAGACACAGGAGGATAC +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGSTILG*EDTGGY
Trigger: GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGA...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTTTAGAAGTAGGGCTTaGATGTCATTAGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSFRSRA*MSLEGK
Trigger: CTTTCCCTCTAATGACATCAAAGCCCTACTTCTAAA...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393443.5
CDS-3UTR CAA 90 bp TCCCACGTACAATGCAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAGTGTGCATTAACTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SHVQCKRFKAPSTLFQCALTVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGTTAA...TGCACACTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGACCCCACGAAATGTCATaGGCTTTCAGTTTAGTATAC +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRPHEMS*AFSLVY
Trigger: GTATACTAAACTGAAAGCCAATGACATTTCGTGGGG...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp TGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: WLPFFKVMLSCGPQGVGTNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...TGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGGAGATGGAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: FSKSCFLAVHKELAQRRWNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...CCATCTCCTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGTTGGAAGAGTTGGGATTTCGCCATACTTaGCATTCTGAGACACTTTGC +
Preference number: 5 (lower is better)
Translates to: CLLESESPLLELELLEELGFRHT*HSETLC
Trigger: GCAAAGTGTCTCAGAATGCAAAGTATGGCGAAATCC...CAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTGAATGTCTGGTGGTCTaGGGCAGAGAGATTCATGTC +
Preference number: 5 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLECLVV*GREIHV
Trigger: GACATGAATCTCTCTGCCCAAGACCACCAGACATTC...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp AAAGGTTTATTTGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: KGLFGTSTILGLEDTGGYRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CAA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp AATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCAAAGCAGTTGCACACTTaGGTAACAATTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: NGFPFSKSCFLAVHKELAKQLHT*VTILSP
Trigger: GGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTT...TGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: GMASLFQSHAFLRSTRSWLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...CCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp GCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGACTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: ASLFQSHAFLRSTRSWHRLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...TCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTELFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: LGMASLFQSHAFLRSTRSLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...ACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: SRNGFPFSKSCFLAVHKELFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...CTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp CTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAGTTGGCACAGAGAGAGAATATAAGCAGTaGCACACTCATTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: LPFFKVMLSCGPQGVGTEREYKQ*HTHLSP
Trigger: TGGAGATAAATGAGTGTGCAACTGCTTATATTCTCT...CTCTGTGCCAACTCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR CAA 90 bp TGCATTATTGCATCTGCGGGACGCAGATGGTCCGAGTCACAAGTAAAGAATGTCAGAGAATATAAGCAGTaGCACACTCATTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: CIIASAGRRWSESQVKNVREYKQ*HTHLSP
Trigger: TGGAGATAAATGAGTGTGCAACTGCTTATATTCTCT...GACATTCTTTACTTGTGACTCGGACCATCTGCGTCCCGCAGATGCAATAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp CAAGACATTGGTGTCTCGTCTATGTTGGGCTTCATACTGGGATCCATGATGTTGATATCTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: QDIGVSSMLGFILGSMMLISVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGATAT...CAACATCATGGATCCCAGTATGAAGCCCAACATAGACGAGACACCAATGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS CCA 90 bp AGGAAAAGCAGCAGGGATAAACTTGAAAGAACCCATTTCATGATATaGGGTGAGAAACAAGAGGCATGTTTTTCCACAATCTTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: RKSSRDKLERTHFMI*GEKQEACFSTIFSG
Trigger: GCCACTGAAGATTGTGGAAAAACATGCCTCTTGTTTCTCACCCCATATCATGAAATGGGTTCTTTCAAGTTTATCCCTGCTGCTTTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485394.6
CDS-3UTR CAA 90 bp TGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACAAATGATTGCTCTCACTGTGCTCAAGTaGTCGTTGATTTTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: WDINNFRVGRHRRIQMIALTVLK*SLIFKG
Trigger: GCCTTTGAAAATCAACGACAACTTGAGCACAGTGAG...AGCAATCATTTGTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CAA 90 bp ATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAGGAAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: ISEWLPFFKVMLSCGPQGNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...TCCTTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAAGGCTTTCTGCATTATaGCATCTGCGGGACGCAGAT +
Preference number: 5 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKRLSAL*HLRDAD
Trigger: ATCTGCGTCCCGCAGATGCAATAATGCAGAAAGCCT...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGCTTCAGCAATGGTTGTaGCTTCCTCTTCAGCCAAGA +
Preference number: 5 (lower is better)
Translates to: IISNMKEIHPYSLSFRRELQQWL*LPLQPR
Trigger: TCTTGGCTGAAGAGGAAGCAACAACCATTGCTGAAG...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TTCTGCTTCAACAACAAACAAACTGATGAGTCGAGGGGCTCAGGGAATTCCAGAAGAGAATATAAGCAGTaGCACACTCATTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: FCFNNKQTDESRGSGNSRREYKQ*HTHLSP
Trigger: TGGAGATAAATGAGTGTGCAACTGCTTATATTCTCT...TCTGGAATTCCCTGAGCCCCTCGACTCATCAGTTTGTTTGTTGTTGAAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp ATAATCTCAAATATGAAGGAGATACATCCCTACTCTCTAAGTTTCAGGAGGGAGGGAAACCTTACTATGTaGGGCTTCATACTGGGATCC +
Preference number: 5 (lower is better)
Translates to: IISNMKEIHPYSLSFRREGNLTM*GFILGS
Trigger: GGATCCCAGTATGAAGCCCAACATAGTAAGGTTTCC...CTCCCTCCTGAAACTTAGAGAGTAGGGATGTATCTCCTTCATATTTGAGATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp TCTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTAGGTTTTCATGGATATaGAACATACTCAGAAGGGGG +
Preference number: 5 (lower is better)
Translates to: SPLFRICSGGRIKLFISSRFSWI*NILRRG
Trigger: CCCCCTTCTGAGTATGTTCAATATCCATGAAAACCT...ACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp TGCCTATTGGAATCTGAGTCCCCGTTACTGGAATTAGAATTGTTGGAAGAGTTGAATGAAGTTCCGTATTaGCGAAAATACCACCATTCA +
Preference number: 5 (lower is better)
Translates to: CLLESESPLLELELLEELNEVPY*RKYHHS
Trigger: TGAATGGTGGTATTTTCGCAAATACGGAACTTCATT...CAACTCTTCCAACAATTCTAATTCCAGTAACGGGGACTCAGATTCCAATAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438863.5
CDS-3UTR CAA 90 bp TGGACCATGGAAATACTTAACTCTCTTACCACAAGGACTGCTAAATTTCTGCTTACCCAAGTATACCGATaGTATTCAGCACCCCTAAAT +
Preference number: 5 (lower is better)
Translates to: WTMEILNSLTTRTAKFLLTQVYR*YSAPLN
Trigger: ATTTAGGGGTGCTGAATACAATCGGTATACTTGGGT...AAGCAGAAATTTAGCAGTCCTTGTGGTAAGAGAGTTAAGTATTTCCATGGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465133.5
CDS-3UTR CAA 90 bp AGTGACATGCTCACATGTGCAATTCAGAAAGACCATTCTTGTGTCAGTATAAAAATGTACACCAAGACATaGGTGTCTCGTCTATGTTGG +
Preference number: 5 (lower is better)
Translates to: SDMLTCAIQKDHSCVSIKMYTKT*VSRLCW
Trigger: CCAACATAGACGAGACACCAATGTCTTGGTGTACAT...TTTTATACTGACACAAGAATGGTCTTTCTGAATTGCACATGTGAGCATGTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265437.9
CDS-3UTR CAA 90 bp TTAAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: LKSRNGFPFSKSCFLAVHLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...GTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
CDS-3UTR CAA 90 bp AAAATCTCGGAATGGCTTCCCTTTTTCAAAGTCATGCTTTCTTGCGGTCCACAAAGAGAATATAAGCAGTaGCACACTCATTTATCTCCA +
Preference number: 5 (lower is better)
Translates to: KISEWLPFFKVMLSCGPQREYKQ*HTHLSP
Trigger: TGGAGATAAATGAGTGTGCAACTGCTTATATTCTCT...TTGTGGACCGCAAGAAAGCATGACTTTGAAAAAGGGAAGCCATTCCGAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393451.7
ENST00000422922.5
CDS-3UTR CAA 90 bp AAAGGTTTATTTGGGACATCAACAATTTTAGGGTTGGAAGACACAGGAGGATACAAGCAGTTGCACACTTaGGTAACAATTTTATCTCCC +
Preference number: 5 (lower is better)
Translates to: KGLFGTSTILGLEDTGGYKQLHT*VTILSP
Trigger: GGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTT...GTATCCTCCTGTGTCTTCCAACCCTAAAATTGTTGATGTCCCAAATAAACCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323984.8
CDS-3UTR CAA 90 bp TCTCCTCTCTTCAGGATATGTTCTGGGGGTAGGATTAAGCTTTTCATTTCTAGTCTGTTTCTGTACAGATaGGGTAAGGATAAAATAGGT +
Preference number: 5 (lower is better)
Translates to: SPLFRICSGGRIKLFISSLFLYR*GKDKIG
Trigger: ACCTATTTTATCCTTACCCAATCTGTACAGAAACAG...ACTAGAAATGAAAAGCTTAATCCTACCCCCAGAACATATCCTGAAGAGAGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000443979.5
CDS TCA 72 bp CCTCTCTGCTGCCGCGGCTCTTGGTGTCTGCCGGGATaGTTCACCGGCCCGGAGGCGCAGCTCGCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: PLCCRGSWCLPG*FTGPEAQLAPP
Trigger: CGGCGGCGCGAGCTGCGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAGAGAGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265437.9
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000438863.5
CDS GCA 72 bp TCAGCGCTCCTCTCTGCTGCCGCGGCTCTTGGTGTCTaGCGGGATGATTCACCGGCCCGGAGGCGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: SALLSAAAALGV*RDDSPARRRSS
Trigger: CGAGCTGCGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265437.9
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000438863.5
CDS CAA 90 bp GCCGCTTCAGCCATGTTTCAGCGCTCCTCTCTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATTCACCGGCCCGGAGGCGCAGCTCGC +
Preference number: 6 (lower is better)
Translates to: AASAMFQRSSLLPRL*VSAGMIHRPGGAAR
Trigger: GCGAGCTGCGCCTCCGGGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAAACATGGCTGAAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265437.9
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000438863.5
CDS CAA 72 bp GCCATGTTTCAGCGCTCCTCTCTGCTGCCGCGGCTCTaGGTGTCTGCCGGGATGATTCACCGGCCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: AMFQRSSLLPRL*VSAGMIHRPGG
Trigger: GCCTCCGGGCCGGTGAATCATCCCGGCAGACACCAAGAGCCGCGGCAGCAGAGAGGAGCGCTGAAACATGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265437.9
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000438863.5
ENST00000443979.5
CDS TCA 72 bp GTGCTCCCTCCCACAAGGGGTGGAAGGCAGTGGGTCTaGGTGGAGTTTGATCCTGCCAGTGCCCAAGTGGCC +
Preference number: 6 (lower is better)
Translates to: VLPPTRGGRQWV*VEFDPASAQVA
Trigger: GGCCACTTGGGCACTGGCAGGATCAAACTCCACTCAGACCCACTGCCTTCCACCCCTTGTGGGAGGGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420755.5
CDS CCA 72 bp CTGCAGCCAGAACATGCTAGAGCCTCCCCTCAAATCTaGAGGCCTGAAGGGACACTGAGGGTCCTCAAGGCC +
Preference number: 6 (lower is better)
Translates to: LQPEHARASPQI*RPEGTLRVLKA
Trigger: GGCCTTGAGGACCCTCAGTGTCCCTTCAGGCCTCCAGATTTGAGGGGAGGCTCTAGCATGTTCTGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS GCA 72 bp GGAGGACAGGGCTTCTCTCAGATCCGTGTTAGCTGGTaGCACAGACTGGATGGGAGGATGCTCTCCACTTTC +
Preference number: 6 (lower is better)
Translates to: GGQGFSQIRVSW*HRLDGRMLSTF
Trigger: GAAAGTGGAGAGCATCCTCCCATCCAGTCTGTGGCACCAGCTAACACGGATCTGAGAGAAGCCCTGTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000323984.8
ENST00000393443.5
ENST00000393444.7
ENST00000393446.6
ENST00000393447.8
ENST00000393449.5
ENST00000393451.7
ENST00000422922.5
ENST00000432298.5
ENST00000446490.5
ENST00000490039.1
CDS GCA 72 bp AGCCGGCTACACAGCAGGGGTCATGAAGCCAGACAATaGAGTCCAAGCTGTGTCCAGCTGCCAGATTCTCCT +
Preference number: 6 (lower is better)
Translates to: SRLHSRGHEARQ*SPSCVQLPDSP
Trigger: AGGAGAATCTGGCAGCTGGACACAGCTTGGACTGCATTGTCTGGCTTCATGACCCCTGCTGTGTAGCCGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS CCA 72 bp GGAAGCTGTGACAACCCTGGCCCTGCCCTCCCAAGCTaGAGTCGCTGTGTAGGGAGAAAAGATGTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: GSCDNPGPALPS*SRCVGRKDVAV
Trigger: TACTGCAACATCTTTTCTCCCTACACAGCGACTCCAGCTTGGGAGGGCAGGGCCAGGGTTGTCACAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487459.5
ENST00000543837.5
CDS CAA 72 bp GTCCACAGATACGTCCAAGACCAAACTATGCAGGACTaGAGCTGCTCCAGAAAGCCCGTGGCCGCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: VHRYVQDQTMQD*SCSRKPVAASA
Trigger: GGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000417919.5
ENST00000438863.5
ENST00000443979.5
ENST00000446490.5
CDS CAA 90 bp AACCACACGGTCCACAGATACGTCCAAGACCAAACTATGCAGGACTaGAGCTGCTCCAGAAAGCCCGTGGCCGCTTCAGCCATGTTTCAG +
Preference number: 6 (lower is better)
Translates to: NHTVHRYVQDQTMQD*SCSRKPVAASAMFQ
Trigger: CTGAAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCTGTGGACCGTGTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000417919.5
ENST00000438863.5
ENST00000443979.5
ENST00000446490.5
CDS TCA 72 bp AAGGCACCCGCAGGATGTAGACCAGGAATAGCACGATaGAGAACCACACGGTCCACAGATACGTCCAAGACC +
Preference number: 6 (lower is better)
Translates to: KAPAGCRPGIAR*RTTRSTDTSKT
Trigger: GGTCTTGGACGTATCTGTGGACCGTGTGGTTCTTCATCGTGCTATTCCTGGTCTACATCCTGCGGGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000417919.5
ENST00000438863.5
ENST00000443979.5
ENST00000446490.5
CDS CCA 72 bp GTACAACTCTATCAGCCAGAAAATGAAACGGCTCCCTaGACTGACGAACCGTTCTGGGGAAGCCTCCTGCCA +
Preference number: 6 (lower is better)
Translates to: VQLYQPENETAP*TDEPFWGSLLP
Trigger: TGGCAGGAGGCTTCCCCAGAACGGTTCGTCAGTCCAGGGAGCCGTTTCATTTTCTGGCTGATAGAGTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422922.5
ENST00000432298.5
CDS CAA 72 bp GCCAAGGCATTGAGGTGCCACTGTTATACTCTCTGGTaGTCCTTCTTCAGGCTAGGGTGGCCCAAGAAGCAC +
Preference number: 6 (lower is better)
Translates to: AKALRCHCYTLW*SFFRLGWPKKH
Trigger: GTGCTTCTTGGGCCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACAGTGGCACCTCAATGCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS CAA 72 bp CCTGAAGGGACACTGAGGGTCCTCAAGGCCAAGGCATaGAGGTGCCACTGTTATACTCTCTGGTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: PEGTLRVLKAKA*RCHCYTLWLSF
Trigger: GAAGGACAACCAGAGAGTATAACAGTGGCACCTCAATGCCTTGGCCTTGAGGACCCTCAGTGTCCCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS TCA 72 bp AACCGAAGAGCTGCTTTTGAAAATCCACTAGGCAAATaGAGGCCGACGTGCCTCTTCTGGGATGCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: NRRAAFENPLGK*RPTCLFWDAVR
Trigger: CCTCACCGCATCCCAGAAGAGGCACGTCGGCCTTCATTTGCCTAGTGGATTTTCAAAAGCAGCTCTTCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS GCA 72 bp AGATACGTCCAAGACCAAACTATGCAGGACTTGAGCTaGTCCAGAAAGCCCGTGGCCGCTTCAGCCATGTTT +
Preference number: 6 (lower is better)
Translates to: RYVQDQTMQDLS*SRKPVAASAMF
Trigger: AAACATGGCTGAAGCGGCCACGGGCTTTCTGGAGCAGCTCAAGTCCTGCATAGTTTGGTCTTGGACGTATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000417919.5
ENST00000438863.5
ENST00000443979.5
ENST00000446490.5
CDS GCA 72 bp CTACAAGTGGCTTTCGTGGAGCGATCACGTGGCCCCTaGCCCCTCGCGTTCTGGGTCCATTTATATTTATTA +
Preference number: 6 (lower is better)
Translates to: LQVAFVERSRGP*PLAFWVHLYLL
Trigger: TAATAAATATAAATGGACCCAGAACGCGAGGGGGCAGGGGCCACGTGATCGCTCCACGAAAGCCACTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS CCA 72 bp AAGGCCAAGGCATTGAGGTGCCACTGTTATACTCTCTaGTTGTCCTTCTTCAGGCTAGGGTGGCCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: KAKALRCHCYTL*LSFFRLGWPKK
Trigger: CTTCTTGGGCCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACAGTGGCACCTCAATGCCTTGGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS CAA 90 bp GTCCTCAAGGCCAAGGCATTGAGGTGCCACTGTTATACTCTCTGGTaGTCCTTCTTCAGGCTAGGGTGGCCCAAGAAGCACCTGTTAATG +
Preference number: 6 (lower is better)
Translates to: VLKAKALRCHCYTLW*SFFRLGWPKKHLLM
Trigger: CATTAACAGGTGCTTCTTGGGCCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACAGTGGCACCTCAATGCCTTGGCCTTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS GCA 72 bp CCCAAGCTGGAGTCGCTGTGTAGGGAGAAAAGATGTTaGAGTAGGTACTGGCGATTTGTCAGAGACAGCTCT +
Preference number: 6 (lower is better)
Translates to: PKLESLCREKRC*SRYWRFVRDSS
Trigger: AGAGCTGTCTCTGACAAATCGCCAGTACCTACTGCAACATCTTTTCTCCCTACACAGCGACTCCAGCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487459.5
ENST00000543837.5
CDS GCA 72 bp ATGAAGCCAGACAATGCAGTCCAAGCTGTGTCCAGCTaGCAGATTCTCCTGTTACGAGCTTCAGTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: MKPDNAVQAVSS*QILLLRASVFS
Trigger: GGAGAAAACTGAAGCTCGTAACAGGAGAATCTGGCAGCTGGACACAGCTTGGACTGCATTGTCTGGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS GCA 72 bp CTCCAATTGGTAGAAGTACCCCAAGCAGCTACAAGCTaGAGAATCCCTGAAGACAATAGCTGCAGCCAGAAC +
Preference number: 6 (lower is better)
Translates to: LQLVEVPQAATS*RIPEDNSCSQN
Trigger: GTTCTGGCTGCAGCTATTGTCTTCAGGGATTCTGCAGCTTGTAGCTGCTTGGGGTACTTCTACCAATTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS CAA 72 bp AGAAGTAGGGCTTTGATGTCATTAGAGGGAAAGGCTTaGGCATCTGTCCTGAGCTCAGCCCAGAAAGCAAAG +
Preference number: 6 (lower is better)
Translates to: RSRALMSLEGKA*ASVLSSAQKAK
Trigger: CTTTGCTTTCTGGGCTGAGCTCAGGACAGATGCCAAAGCCTTTCCCTCTAATGACATCAAAGCCCTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000417919.5
ENST00000449366.5
CDS CAA 90 bp GCCGGAGGGATTTCCAGTTCATCTTCAACACGCATGAAAATACTCTaGCAATTCCAGTCCCTGAACTCTGCCGAGCAGAAAATGTCAATC +
Preference number: 6 (lower is better)
Translates to: AGGISSSSSTRMKIL*QFQSLNSAEQKMSI
Trigger: GATTGACATTTTCTGCTCGGCAGAGTTCAGGGACTGGAATTGCAAGAGTATTTTCATGCGTGTTGAAGATGAACTGGAAATCCCTCCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265437.9
ENST00000464020.1
CDS GCA 72 bp ACTGAGACTTCATGGAAAGTGCCTTCCCACGTACAATaGAAAAGATTCAAAGCCCCTTCCACTCTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: TETSWKVPSHVQ*KRFKAPSTLFQ
Trigger: CTGGAAGAGAGTGGAAGGGGCTTTGAATCTTTTGCATTGTACGTGGGAAGGCACTTTCCATGAAGTCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393446.6
CDS CCA 72 bp TGTTATACTCTCTGGTTGTCCTTCTTCAGGCTAGGGTaGCCCAAGAAGCACCTGTTAATGCATGTTTCTAGG +
Preference number: 6 (lower is better)
Translates to: CYTLWLSFFRLG*PKKHLLMHVSR
Trigger: CCTAGAAACATGCATTAACAGGTGCTTCTTGGGCCACCCTAGCCTGAAGAAGGACAACCAGAGAGTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543837.5
CDS TCA 72 bp TGTTCAAAAACATGCTCACTGTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCAGGATGTAGACCAGGA +
Preference number: 6 (lower is better)
Translates to: CSKTCSLCSSCR*FSKAPAGCRPG
Trigger: TCCTGGTCTACATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGTGAGCATGTTTTTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393446.6
ENST00000393449.5
ENST00000393451.7
ENST00000446490.5
CDS TCA 72 bp CTCCTGTTACGAGCTTCAGTTTTCTCCCGGTGTGATTaGAATGCAAGGTCTCTTAACAGCACCAAAAACCGA +
Preference number: 6 (lower is better)
Translates to: LLLRASVFSRCD*NARSLNSTKNR
Trigger: TCGGTTTTTGGTGCTGTTAAGAGACCTTGCATTTCAATCACACCGGGAGAAAACTGAAGCTCGTAACAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000393443.5
ENST00000393444.7
ENST00000393447.8
ENST00000434836.5
ENST00000462544.1
ENST00000465133.5
ENST00000467538.5
ENST00000477742.5
ENST00000487459.5
CDS CAA 72 bp GGGAATCACATCCAGTCTGGTTTTAGAAGTAGGGCTTaGATGTCATTAGAGGGAAAGGCTTTGGCATCTGTC +
Preference number: 6 (lower is better)
Translates to: GNHIQSGFRSRA*MSLEGKALASV
Trigger: GACAGATGCCAAAGCCTTTCCCTCTAATGACATCAAAGCCCTACTTCTAAAACCAGACTGGATGTGATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000417919.5
ENST00000449366.5
CDS CAA 90 bp TTTGTAGAAGGGAATCACATCCAGTCTGGTTTTAGAAGTAGGGCTTaGATGTCATTAGAGGGAAAGGCTTTGGCATCTGTCCTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: FVEGNHIQSGFRSRA*MSLEGKALASVLSS
Trigger: TGAGCTCAGGACAGATGCCAAAGCCTTTCCCTCTAATGACATCAAAGCCCTACTTCTAAAACCAGACTGGATGTGATTCCCTTCTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393443.5
ENST00000417919.5
ENST00000449366.5
CDS TCA 72 bp ACTCTGGACCTAATTTCATTTATCTCCAAGGCTTCATaGGCTGCAGAAATCCTAGCTTGGGGGTTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: TLDLISFISKAS*AAEILAWGFLS
Trigger: AGAGAGAAACCCCCAAGCTAGGATTTCTGCAGCTCATGAAGCCTTGGAGATAAATGAAATTAGGTCCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
ENST00000487459.5
ENST00000490039.1
CDS CAA 72 bp ATTTCCAGTTCATCTTCAACACGCATGAAAATACTCTaGCAATTCCAGTCCCTGAACTCTGCCGAGCAGAAA +
Preference number: 6 (lower is better)
Translates to: ISSSSSTRMKIL*QFQSLNSAEQK
Trigger: TTTCTGCTCGGCAGAGTTCAGGGACTGGAATTGCAAGAGTATTTTCATGCGTGTTGAAGATGAACTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265437.9
ENST00000464020.1
CDS TCA 72 bp TTCAACAAATATTTTTCTCTGTGCTCAAGTTGTCGTTaGTTTTCAAAGGCACCCGCAGGATGTAGACCAGGA +
Preference number: 6 (lower is better)
Translates to: FNKYFSLCSSCR*FSKAPAGCRPG
Trigger: TCCTGGTCTACATCCTGCGGGTGCCTTTGAAAATCAACGACAACTTGAGCACAGAGAAAAATATTTGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000417919.5
CDS CCA 72 bp CAAAAACATGCTCACTTAATAACCCTCAAGGACAAGTaGAGCAAGATCTCAGACGATCTGTTCCCTTTTAGT +
Preference number: 6 (lower is better)
Translates to: QKHAHLITLKDK*SKISDDLFPFS
Trigger: ACTAAAAGGGAACAGATCGTCTGAGATCTTGCTCCACTTGTCCTTGAGGGTTATTAAGTGAGCATGTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434836.5
CDS TCA 72 bp AAAGCAGCAGGGATAAACTTGAAAGAACCCATTTCATaGTATGGGGTGAGAAACAAGAGGCATGTTTTTCCA +
Preference number: 6 (lower is better)
Translates to: KAAGINLKEPIS*YGVRNKRHVFP
Trigger: TGGAAAAACATGCCTCTTGTTTCTCACCCCATATCATGAAATGGGTTCTTTCAAGTTTATCCCTGCTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485394.6
CDS CAA 72 bp TTGTTGCTTCCTCTTCAGCCAAGAGAATATAAGCAGTaGCACACTTTGGTAACAATTTTATCTCCCAGATGG +
Preference number: 6 (lower is better)
Translates to: LLLPLQPREYKQ*HTLVTILSPRW
Trigger: CCATCTGGGAGATAAAATTGTTACCAAAGTGTGCAACTGCTTATATTCTCTTGGCTGAAGAGGAAGCAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265437.9
ENST00000323984.8
ENST00000393447.8
ENST00000393449.5
ENST00000432298.5
ENST00000487459.5
ENST00000490039.1
CDS CAA 72 bp TCTCAGACGATCTGTTCCCTTTTAGTTACAGGAAACTaGATAATGAAGATCTCCACCATGAAGATTCAGTGC +
Preference number: 6 (lower is better)
Translates to: SQTICSLLVTGN*IMKISTMKIQC
Trigger: GCACTGAATCTTCATGGTGGAGATCTTCATTATCAAGTTTCCTGTAACTAAAAGGGAACAGATCGTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434836.5
ENST00000462544.1
CDS CCA 72 bp ACAAATATTTTTCTCTTAATAACCCTCAAGGACAAGTaGAGCAAGATCTCAGACGATCTGTTCCCTTTTAGT +
Preference number: 6 (lower is better)
Translates to: TNIFLLITLKDK*SKISDDLFPFS
Trigger: ACTAAAAGGGAACAGATCGTCTGAGATCTTGCTCCACTTGTCCTTGAGGGTTATTAAGAGAAAAATATTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462544.1