RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST6GALNAC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000117069

Ensembl transcript IDs: ENST00000318803.6, ENST00000477717.6, ENST00000480428.1, ENST00000488940.1, ENST00000496845.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTaGAGCTGTTTTCTGCTACCCTTTCCTGTCTGGTGGCTCAGGAAG +
Preference number: 1 (lower is better)
Translates to: FVTPGRRLSMVLPEE*SCFLLPFPVWWLRK
Trigger: CTTCCTGAGCCACCAGACAGGAAAGGGTAGCAGAAAACAGCTTCACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR TCA 90 bp ACCCTTTCCTGTCTGGTGGCTCAGGAAGTTCAGTGTCTCGGTGTCTaGTGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCT +
Preference number: 1 (lower is better)
Translates to: TLSCLVAQEVQCLGV*CSEYLGLQSGMLIP
Trigger: AGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCACCAGACAGGAAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR TCA 90 bp CTGTCTGGTGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTaGATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACAC +
Preference number: 1 (lower is better)
Translates to: LSGGSGSSVSRCLMQ*IPGITVWHAHSLEH
Trigger: GTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCACCAGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR CCA 90 bp CCTCACAGAAGGGCAGCTGTTTGCTATTGTAGCCAGGGAACCCCTTaGAGCTATGTCTTTTGTGTGTGTGTGTGTGTGTGTATCCTGTGT +
Preference number: 1 (lower is better)
Translates to: PHRRAAVCYCSQGTP*SYVFCVCVCVCILC
Trigger: ACACAGGATACACACACACACACACACACAAAAGACATAGCTCCAAGGGGTTCCCTGGCTACAATAGCAAACAGCTGCCCTTCTGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 90 bp ACCTTCTGGCATGTGCTAACACCTAGGCAATTGGTTCACACATCCTaGCCCCCAGGGCTTATTATTATAGTTCTCTTTGACGTGGCCTTC +
Preference number: 1 (lower is better)
Translates to: TFWHVLTPRQLVHTS*PPGLIIIVLFDVAF
Trigger: GAAGGCCACGTCAAAGAGAACTATAATAATAAGCCCTGGGGGGCAGGATGTGTGAACCAATTGCCTAGGTGTTAGCACATGCCAGAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 90 bp CCCTTAGGAGTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTaGCAAATGCCCATTAACGGTAATGGAAATCACACAGCTAAGTCT +
Preference number: 1 (lower is better)
Translates to: PLGVHTRVSKAQGLS*QMPINGNGNHTAKS
Trigger: AGACTTAGCTGTGTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTACTCCTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CCA 90 bp TATGGTAGCCAGATATATTCCTCCCACCTACCATGGTCATTACTCTaGCAGGACCTACCCCAAATCTGTTTCCCAGATAGATCTTTAGTT +
Preference number: 1 (lower is better)
Translates to: YGSQIYSSHLPWSLL*QDLPQICFPDRSLV
Trigger: AACTAAAGATCTATCTGGGAAACAGATTTGGGGTAGGTCCTGCCAGAGTAATGACCATGGTAGGTGGGAGGAATATATCTGGCTACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 90 bp TCAGACGACAGTCATGAAATGGTAGTGGGAAGACAAGAATTCAATTaGCCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTC +
Preference number: 1 (lower is better)
Translates to: SDDSHEMVVGRQEFN*PQPGSSAQSIRILV
Trigger: GACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACCATTTCATGACTGTCGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACATCCCTGCAGAAGTCTaGGGGCACCATGCCATAAAC +
Preference number: 2 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYIPAEV*GHHAIN
Trigger: GTTTATGGCATGGTGCCCCCAGACTTCTGCAGGGAT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR GCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACAGAAGGGCAGCTGTTTaGTATTGTAGCCAGGGAACC +
Preference number: 2 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINRRAAV*YCSQGT
Trigger: GGTTCCCTGGCTACAATAGCAAACAGCTGCCCTTCT...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR TCA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTCCATGCCATAAACATTaGTCCTGTCACAGAGCTCCA +
Preference number: 2 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTPCHKH*SCHRAP
Trigger: TGGAGCTCTGTGACAGGATCAATGTTTATGGCATGG...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR TCA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCCAATCTTACTGGCTTTaGACAGCCCAAGCCATACAC +
Preference number: 2 (lower is better)
Translates to: GSGKTRIQLPTTRFISTIQSYWL*TAQAIH
Trigger: GTGTATGGCTTGGGCTGTTCAAAGCCAGTAAGATTG...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGGTGATGACTGCCCTTaGGTCCTCGCTCATGGGAGA +
Preference number: 2 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSGDDCP*VLAHGR
Trigger: TCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR CAA 90 bp AGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGGTACATaGTACATTCATCAGGTCCAAAAGGTTCATAATAATGATAAGGTA +
Preference number: 2 (lower is better)
Translates to: SGDDCPCVLAHGRGT*YIHQVQKVHNNDKV
Trigger: TACCTTATCATTATTATGAACCTTTTGGACCTGATGAATGTACAATGTACCTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR CCA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCTGCAGAGTCTTCAAATaGGTCAAGAAGAGGCCACAA +
Preference number: 2 (lower is better)
Translates to: GSGKTRIQLPTTRFISTICRVFK*VKKRPQ
Trigger: TTGTGGCCTCTTCTTGACCCATTTGAAGACTCTGCA...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR TCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCGGTGTCTGATGCAGTaGATACCTGGGATTACAGTC +
Preference number: 2 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSRCLMQ*IPGITV
Trigger: GACTGTAATCCCAGGTATTCACTGCATCAGACACCG...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR-3UTR TCA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACAAAGAGCAGTTTTCCTaGAGCCTAGGGGTTCAAAAA +
Preference number: 2 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHKEQFS*SLGVQK
Trigger: TTTTTGAACCCCTAGGCTTCAGGAAAACTGCTCTTT...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR TCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTTCAGACGACAGTCATaGAATGGTAGTGGGAAGACA +
Preference number: 2 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCFRRQS*NGSGKT
Trigger: TGTCTTCCCACTACCATTTCATGACTGTCGTCTGAA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR TCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGCGGTGTCTGATGCAGTaGATACCTGGGATTACAGTC +
Preference number: 2 (lower is better)
Translates to: SEIMSIVSACFLQITHTERCLMQ*IPGITV
Trigger: GACTGTAATCCCAGGTATTCACTGCATCAGACACCG...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR-3UTR TCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGTCCATGGTACTTCCTaGGGAGTGAAGCTGTTTTCT +
Preference number: 2 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSVHGTS*GVKLFS
Trigger: AGAAAACAGCTTCACTCCTCAGGAAGTACCATGGAC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR-3UTR CCA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCAAGTTACAAACGAGATaGAGCTACCATGATGGTTTT +
Preference number: 2 (lower is better)
Translates to: GSGKTRIQLPTTRFISTIKLQTR*SYHDGF
Trigger: AAAACCATCATGGTAGCTCCATCTCGTTTGTAACTT...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR TCA 90 bp AATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTATAATGATAAGGTACTaGAGGGTGATTGGGATCCCT +
Preference number: 2 (lower is better)
Translates to: NTWDYSLACSFLRTQVYSIMIRY*RVIGIP
Trigger: AGGGATCCCAATCACCCTTCAGTACCTTATCATTAT...AGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR GCA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCTTGAGTTGCTTATGTTaGAGTTTCAAAGGCAATACT +
Preference number: 2 (lower is better)
Translates to: GSGKTRIQLPTTRFISTILSCLC*SFKGNT
Trigger: AGTATTGCCTTTGAAACTGCAACATAAGCAACTCAA...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGTTGCGTCCTCGCTCATaGGAGAGGTACATTGTACAT +
Preference number: 2 (lower is better)
Translates to: SEIMSIVSACFLQITHTELRPRS*ERYIVH
Trigger: ATGTACAATGTACCTCTCCCATGAGCGAGGACGCAA...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR CCA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATTGGATCGACCAGCTGTaGCATTGTATTACTGTGGTC +
Preference number: 2 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYWIDQL*HCITVV
Trigger: GACCACAGTAATACAATGCCACAGCTGGTCGATCCA...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR GCA 90 bp AATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTAATATTGAATGTCCGTaGCCAGTTCTTAAAGACTCG +
Preference number: 2 (lower is better)
Translates to: NTWDYSLACSFLRTQVYSNIECP*PVLKDS
Trigger: CGAGTCTTTAAGAACTGGGCACGGACATTCAATATT...AGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR CAA 90 bp CTTACTGGCTTTGAACAGCCCAAGCCATACACATCAATATCAACTTaGTTTATGTTATGTGAGTACCCTGATTGTGTTTGCATTTTAACA +
Preference number: 2 (lower is better)
Translates to: LTGFEQPKPYTSIST*FMLCEYPDCVCILT
Trigger: TGTTAAAATGCAAACACAATCAGGGTACTCACATAACATAAACAAAGTTGATATTGATGTGTATGGCTTGGGCTGTTCAAAGCCAGTAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACCTTTATGAAAGTCAGTaGAGATGTGCTCTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNLYESQ*RCALQK
Trigger: TTTCTGAAGAGCACATCTCCACTGACTTTCATAAAG...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR GCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACCACAAATATAGAAATTaGCAAAGGAGCCACTTATGT +
Preference number: 2 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNHKYRN*QRSHLC
Trigger: ACATAAGTGGCTCCTTTGGCAATTTCTATATTTGTG...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR GCA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATTGCATGTTGAAACTATaGCTTTCCAAATTTCCACAA +
Preference number: 2 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYCMLKL*LSKFPQ
Trigger: TTGTGGAAATTTGGAAAGGCATAGTTTCAACATGCA...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CAA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACTCCAACTGCACTGCTTaGTCACCCCTGGTAGGCGTC +
Preference number: 3 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINSNCTA*SPLVGV
Trigger: GACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGA...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR TCA 72 bp GGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTaGATACCTGGGATTACAGTCTGGCATGCTCATTCC +
Preference number: 3 (lower is better)
Translates to: GSGSSVSRCLMQ*IPGITVWHAHS
Trigger: GGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR TCA 72 bp TGTCTGGTGGCTCAGGAAGTTCAGTGTCTCGGTGTCTaGTGCAGTGAATACCTGGGATTACAGTCTGGCATG +
Preference number: 3 (lower is better)
Translates to: CLVAQEVQCLGV*CSEYLGLQSGM
Trigger: CATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR GCA 72 bp AAGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTaGAGAGTCTTCAAATGGGTCAAGAAGAGGCCACAA +
Preference number: 3 (lower is better)
Translates to: KFLLLLGPHHSK*RVFKWVKKRPQ
Trigger: TTGTGGCCTCTTCTTGACCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CCA 72 bp AGGGCAGCTGTTTGCTATTGTAGCCAGGGAACCCCTTaGAGCTATGTCTTTTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: RAAVCYCSQGTP*SYVFCVCVCVC
Trigger: ACACACACACACACACACACAAAAGACATAGCTCCAAGGGGTTCCCTGGCTACAATAGCAAACAGCTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CAA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTCCAACTGCACTGCTTaGTCACCCCTGGTAGGCGTC +
Preference number: 3 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSSNCTA*SPLVGV
Trigger: GACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR CCA 72 bp CAGATATATTCCTCCCACCTACCATGGTCATTACTCTaGCAGGACCTACCCCAAATCTGTTTCCCAGATAGA +
Preference number: 3 (lower is better)
Translates to: QIYSSHLPWSLL*QDLPQICFPDR
Trigger: TCTATCTGGGAAACAGATTTGGGGTAGGTCCTGCCAGAGTAATGACCATGGTAGGTGGGAGGAATATATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CCA 72 bp TTGTATGGTAGCCAGATATATTCCTCCCACCTACCATaGTCATTACTCTGGCAGGACCTACCCCAAATCTGT +
Preference number: 3 (lower is better)
Translates to: LYGSQIYSSHLP*SLLWQDLPQIC
Trigger: ACAGATTTGGGGTAGGTCCTGCCAGAGTAATGACCATGGTAGGTGGGAGGAATATATCTGGCTACCATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR TCA 72 bp ATCAGGTCCAAAAGGTTCATAATAATGATAAGGTACTaGAGGGTGATTGGGATCCCTGCAGAAGTCTGGGGG +
Preference number: 3 (lower is better)
Translates to: IRSKRFIIMIRY*RVIGIPAEVWG
Trigger: CCCCCAGACTTCTGCAGGGATCCCAATCACCCTTCAGTACCTTATCATTATTATGAACCTTTTGGACCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR TCA 72 bp TTTGCATTTGCATTTCAACACCCTGAGAAGGTGGGATaGGTGAGCTACAAAAGAGGGGCTACACTTGCTCAT +
Preference number: 3 (lower is better)
Translates to: FAFAFQHPEKVG*VSYKRGATLAH
Trigger: ATGAGCAAGTGTAGCCCCTCTTTTGTAGCTCACTCATCCCACCTTCTCAGGGTGTTGAAATGCAAATGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 72 bp CCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATaGCCATTAACGGTAATGGAAATCACACAGCTAAGT +
Preference number: 3 (lower is better)
Translates to: PGLAKHRDLVAK*PLTVMEITQLS
Trigger: ACTTAGCTGTGTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 72 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTaGCAAATGCCCATTAACGGTAATGGAAATCACACA +
Preference number: 3 (lower is better)
Translates to: VHTRVSKAQGLS*QMPINGNGNHT
Trigger: TGTGTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 72 bp CATGTGCTAACACCTAGGCAATTGGTTCACACATCCTaGCCCCCAGGGCTTATTATTATAGTTCTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: HVLTPRQLVHTS*PPGLIIIVLFD
Trigger: GTCAAAGAGAACTATAATAATAAGCCCTGGGGGGCAGGATGTGTGAACCAATTGCCTAGGTGTTAGCACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CAA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGTTGAGTTGCTTATGTaGCAGTTTCAAAGGCAATAC +
Preference number: 3 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINVELLM*QFQRQY
Trigger: GTATTGCCTTTGAAACTGCAACATAAGCAACTCAAC...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 72 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATaGTCATTCCTTAGAACACAGGTTTATTCTCAGGAT +
Preference number: 3 (lower is better)
Translates to: SDAVNTWDYSLA*SFLRTQVYSQD
Trigger: ATCCTGAGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR CAA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACCATGGGAGAGGTACATaGTACATTCATCAGGTCCAA +
Preference number: 3 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHHGRGT*YIHQVQ
Trigger: TTGGACCTGATGAATGTACAATGTACCTCTCCCATG...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318803.6
3UTR-3UTR CAA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACGGAATGCAACTAATATaGTTGAGTTGCTTATGTTGC +
Preference number: 3 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHGMQLI*LSCLCC
Trigger: GCAACATAAGCAACTCAACAATATTAGTTGCATTCC...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CAA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACATATTCCAGTATGTTTaGGACGGCCATTTCAATCTT +
Preference number: 3 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHIFQYV*DGHFNL
Trigger: AAGATTGAAATGGCCGTCCAAAACATACTGGAATAT...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR-3UTR CAA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCAGTGGTGTAACTGAATaGAATGTTCAGCTCCTAAGG +
Preference number: 3 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSSGVTE*NVQLLR
Trigger: CCTTAGGAGCTGAACATTCAATTCAGTTACACCACT...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
3UTR-3UTR CAA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACTTGGAGCTATGTCTTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNLELCL*CVCVCV
Trigger: CACACACACACACACACACAAAAGACATAGCTCCAA...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR TCA 72 bp GTATGTTTTGGACGGCCATTTCAATCTTACTGGCTTTaGACAGCCCAAGCCATACACATCAATATCAACTTT +
Preference number: 3 (lower is better)
Translates to: VCFGRPFQSYWL*TAQAIHININF
Trigger: AAAGTTGATATTGATGTGTATGGCTTGGGCTGTTCAAAGCCAGTAAGATTGAAATGGCCGTCCAAAACATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR GCA 72 bp ATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTaGTTTTTACAAATCACACATACAGAGTCTAACAGA +
Preference number: 3 (lower is better)
Translates to: MCSSEIMSIVSA*FLQITHTESNR
Trigger: TCTGTTAGACTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGGGGCGGAGGCGGCTCTaGTTTTTGCCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SSCYCWGPITPSAESSNGGRRRL*FLPSSR
Trigger: CCGGCTGCTGGGCAAAAATCAGAGCCGCCTCCGCCC...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACGGGGGCCGCTCCTTCTaGCCGCCGAGGCTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYGGRSF*PPRLLY
Trigger: GTACAGCAGCCTCGGCGGCCAGAAGGAGCGGCCCCC...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTGCTGCGAGCTGCCGGTaGCCGACGCCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRAASCR*PTPAAA
Trigger: AGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAGC...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTGCAGATGCCCTGAGCTaGTCACCAGGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSADALS*SPGHSP
Trigger: GGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGC...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTCTCTGTGATAAAGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGGTGCAGCAGATGCCCTaGGCTGGTCACCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: FLCDKAVMTALASSLMGEVQQMP*AGHQGT
Trigger: TGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCAC...CTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCTTTATCACAGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGCGGCTCTGATTTTTaGCCAGCAGCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINGGSDF*PAAGRG
Trigger: GCCGCGGCCGGCTGCTGGGCAAAAATCAGAGCCGCC...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTCTCTGGATGCTGGAATaGGCGATGACCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSLWMLE*AMTLRL
Trigger: CAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAG...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTGGTGATGACTGCCCTTaGGTCCTCGCTCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSGDDCP*VLAHGR
Trigger: TCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACC...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTACGTTGAGCAGGTCATaGCGGTTGCGGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSTLSRS*RLRRIL
Trigger: GAGGATCCTCCGCAACCGCCATGACCTGCTCAACGT...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTGGGCGGAGGCGGCTCTaGTTTTTGCCCAGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTGRRRL*FLPSSR
Trigger: CCGGCTGCTGGGCAAAAATCAGAGCCGCCTCCGCCC...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR TCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTGTGCAGCAGATGCCCTaGGCTGGTCACCAGGGCACA +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRVQQMP*AGHQGT
Trigger: TGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCAC...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGGGAAGAGGCGGATGGTaGTGCTTCGAGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSCYCWGPITPSAESSNGGRGGW*CFERSR
Trigger: CCTGCTTCTCTCGAAGCATCACCATCCGCCTCTTCC...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTCTCTGTGATAAAGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGTCTGGCCGCCGAGGCTaGTGTACACTAGCAACAAGC +
Preference number: 4 (lower is better)
Translates to: FLCDKAVMTALASSLMGESGRRG*CTLATS
Trigger: GCTTGTTGCTAGTGTACAGCAGCCTCGGCGGCCAGA...CTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCTTTATCACAGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACTGTAGACCTGGCCCTTaGCGTCCCGCCGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYCRPGP*RPAACS
Trigger: GCTACATGCGGCGGGACGGCAAGGGCCAGGTCTACA...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACGAGGTATCCGTCCAGTaGCCGCGGTCCCGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHEVSVQ*PRSRGD
Trigger: GTCCCCGCGGGACCGCGGCCACTGGACGGATACCTC...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTGCAGATGCCCTGAGCTaGTCACCAGGGCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRADALS*SPGHSP
Trigger: GGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGC...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACGCCCATAGCCGCGTGTaGGGGCGTCATTCATGCGGA +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYAHSRV*GRHSCG
Trigger: TCCGCATGAATGACGCCCCCACACGCGGCTATGGGC...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACCCTGGAGGGTTTCCATaGTGGGTAATGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYPGGFP*WVMGRR
Trigger: CCTCCGCCCCATTACCCATCATGGAAACCCTCCAGG...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTCGACTGTGCAGCAGATaGCCTGAGCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRRLCSR*PELVTR
Trigger: CCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCG...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGTCAATCTGGGAGCCTTaGCGACTGTGCAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SSCYCWGPITPSAESSNGSIWEP*RLCSRC
Trigger: GCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGA...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTCTCTGTGATAAAGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGATGAACACGGTGCCCTaGCTCACGTTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLCDKAVMTALASSLMGEMNTVP*LTLSRS
Trigger: TGACCTGCTCAACGTGAGCCAGGGCACCGTGTTCAT...CTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCTTTATCACAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACCCAGGGCACAGTCCCTaGAGTGCATTTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYPGHSP*SAFSGA
Trigger: AGCCCCTGAAAATGCACTGCAGGGACTGTGCCCTGG...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTCTCTGGATGCTGGAATaGGCGATGACCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRLWMLE*AMTLRL
Trigger: CAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAG...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACGGTGATGACTGCCCTTaGGTCCTCGCTCATGGGAGA +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYGDDCP*VLAHGR
Trigger: TCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACC...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTCTCTGTGATAAAGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGATTTTCAGGGGCTTGTaGTCCGCCACTCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: FLCDKAVMTALASSLMGEIFRGL*SATPRY
Trigger: ATACCTCGGAGTGGCGGACCACAAGCCCCTGAAAAT...CTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCTTTATCACAGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTACGTTGAGCAGGTCATaGCGGTTGCGGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRTLSRS*RLRRIL
Trigger: GAGGATCCTCCGCAACCGCCATGACCTGCTCAACGT...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTCCATGGTCATTACTCTaGCAGGACCTACCCCAAATC +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSPWSLL*QDLPQI
Trigger: GATTTGGGGTAGGTCCTGCCAGAGTAATGACCATGG...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTTGCTGGAATGCGCGATaGCCCTCAGGCTGGTGCGAT +
Preference number: 4 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTCWNAR*PSGWCD
Trigger: ATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCA...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR TCA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACATGGGGCCCCAGAAGATaGACACGGTGCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTWGPRR*TRCPGS
Trigger: TGAGCCAGGGCACCGTGTTCATCTTCTGGGGCCCCA...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR TCA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGTGCCAGTCTCCTGCTTaGAGAGCTCATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: SSCYCWGPITPSAESSNGCQSPA*RAHQTA
Trigger: TGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCA...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTTGGGCACCTCTTTTGTaGAGAATCCTCAGGCTCGCG +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRWAPLL*RILRLA
Trigger: CGCGAGCCTGAGGATTCTGCACAAAAGAGGTGCCCA...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGCTGCGAGCTGCCGGTaGCCGACGCCTGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSAASCR*PTPAAA
Trigger: AGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAGC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACTCTGTCTGGTCAATCTaGGAGCCTTGCCGACTGTGC +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYSVWSI*EPCRLC
Trigger: GCACAGTCGGCAAGGCTCCCAGATTGACCAGACAGA...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTTTGCGGAGGATCCTCTaGATGCTGGAATGCGCGATG +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRLRRIL*MLECAM
Trigger: CATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAA...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTATGAACACGGTGCCCTaGCTCACGTTGAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRMNTVP*LTLSRS
Trigger: TGACCTGCTCAACGTGAGCCAGGGCACCGTGTTCAT...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTGGGGCCCCAGAAGATaGACACGGTGCCCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCWGPRR*TRCPGS
Trigger: TGAGCCAGGGCACCGTGTTCATCTTCTGGGGCCCCA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTCCTGAGAAGGTGGGATaGGTGAGCTACAAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRPEKVG*VSYKRG
Trigger: CCCTCTTTTGTAGCTCACTCATCCCACCTTCTCAGG...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGGCGGCTCTGATTTTTaGCCAGCAGCCGGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSGGSDF*PAAGRG
Trigger: GCCGCGGCCGGCTGCTGGGCAAAAATCAGAGCCGCC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp GGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTCAGGATGCGACTGTGCAGCAGATaGCCTGAGCTGGTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GITVWHAHSLEHRFILRMRLCSR*PELVTR
Trigger: CCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCG...CATCCTGAGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGGAGGTATCCGTCCAGTaGCCGCGGTCCCGCGGGGAC +
Preference number: 4 (lower is better)
Translates to: SEIMSIVSACFLQITHTEEVSVQ*PRSRGD
Trigger: GTCCCCGCGGGACCGCGGCCACTGGACGGATACCTC...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTATCCCTGCAGAAGTCTaGGGGCACCATGCCATAAAC +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRIPAEV*GHHAIN
Trigger: GTTTATGGCATGGTGCCCCCAGACTTCTGCAGGGAT...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTTTCCAAAGTACCTTCTaGCATGTGCTAACACCTAGG +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSFQSTF*HVLTPR
Trigger: CCTAGGTGTTAGCACATGCCAGAAGGTACTTTGGAA...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACTGCCAGTCTCCTGCTTaGAGAGCTCATCAAACTGCA +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYCQSPA*RAHQTA
Trigger: TGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCA...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTCCCCATCACTCCAAGTaGAGAGTCTTCAAATGGGTC +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRPHHSK*RVFKWV
Trigger: GACCCATTTGAAGACTCTGCACTTGGAGTGATGGGG...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACAGAAGGGCAGCTGTTTaGTATTGTAGCCAGGGAACC +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYRRAAV*YCSQGT
Trigger: GGTTCCCTGGCTACAATAGCAAACAGCTGCCCTTCT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTCTCTGTGATAAAGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGTCAGGGTCTTCATTTTaGGCACCTCTTTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: FLCDKAVMTALASSLMGESGSSF*APLLCR
Trigger: TCTGCACAAAAGAGGTGCCCAAAATGAAGACCCTGA...CTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCTTTATCACAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACATTTTCAGGGGCTTGTaGTCCGCCACTCCGAGGTAT +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINIFRGL*SATPRY
Trigger: ATACCTCGGAGTGGCGGACCACAAGCCCCTGAAAAT...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACCGTCATTCATGCGGATaGCACACTCTGTCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINRHSCG*HTLSGQ
Trigger: TTGACCAGACAGAGTGTGTCATCCGCATGAATGACG...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTGCCCTGGCTCACGTTaGGCAGGTCATGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKECPGSR*AGHGGC
Trigger: GCAACCGCCATGACCTGCTCAACGTGAGCCAGGGCA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGTATTATAGTTCTCTTTaGCGTGGCCTTCTGATAGGG +
Preference number: 4 (lower is better)
Translates to: SSCYCWGPITPSAESSNGYYSSL*RGLLIG
Trigger: CCCTATCAGAAGGCCACGTCAAAGAGAACTATAATA...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACAACAGCACCAAAGACTaGTGGTTTAGGAGCACACTG +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYNSTKD*WFRSTL
Trigger: CAGTGTGCTCCTAAACCAGCAGTCTTTGGTGCTGTT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACATGACACACTCTGTCTaGTCAATCTGGGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINMTHSV*SIWEPC
Trigger: GCAAGGCTCCCAGATTGACCAGACAGAGTGTGTCAT...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CAA 72 bp TTCCGGAATTTTTCCTTACAATCCAACTGCACTGCTTaGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTC +
Preference number: 4 (lower is better)
Translates to: FRNFSLQSNCTA*SPLVGVCPWYF
Trigger: GAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCCTGGAGGGTTTCCATaGTGGGTAATGGGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSPGGFP*WVMGRR
Trigger: CCTCCGCCCCATTACCCATCATGGAAACCCTCCAGG...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTGCTGGAATGCGCGATaGCCCTCAGGCTGGTGCGAT +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKECWNAR*PSGWCD
Trigger: ATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACTGCCCTGGCTCACGTTaGGCAGGTCATGGCGGTTGC +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNCPGSR*AGHGGC
Trigger: GCAACCGCCATGACCTGCTCAACGTGAGCCAGGGCA...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTCAGGCTGGTGCGATTaGCCACGTCACGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSSGWCD*PRHAHS
Trigger: GCTATGGGCGTGACGTGGGCAATCGCACCAGCCTGA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTCAGGCTGGTGCGATTaGCCACGTCACGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKESGWCD*PRHAHS
Trigger: GCTATGGGCGTGACGTGGGCAATCGCACCAGCCTGA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACTGTAGACCTGGCCCTTaGCGTCCCGCCGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNCRPGP*RPAACS
Trigger: GCTACATGCGGCGGGACGGCAAGGGCCAGGTCTACA...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACAAGAGCTCATCAAACTaGAGCATCTTGTGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYKSSSN*SILWRV
Trigger: TACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGCACAGGGACTTAGTTaGCAAATGCCCATTAACGGT +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINAQGLS*QMPING
Trigger: ACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGC...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACGGGGCCACTTTTTCCTaGAGGGTTTCCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHGATFS*RVSMMG
Trigger: ACCCATCATGGAAACCCTCCAGGAAAAAGTGGCCCC...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATGCCCATAGCCGCGTGTaGGGGCGTCATTCATGCGGA +
Preference number: 4 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYAHSRV*GRHSCG
Trigger: TCCGCATGAATGACGCCCCCACACGCGGCTATGGGC...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACCCTGGGATTACAGTCTaGCATGCTCATTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYPGITV*HAHSLE
Trigger: TTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGG...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTCTTTATGAAAGTCAGTaGAGATGTGCTCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSLYESQ*RCALQK
Trigger: TTTCTGAAGAGCACATCTCCACTGACTTTCATAAAG...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp AATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTTGGTGCACATGGTGGTaGGCGCTAAACACACTGCCA +
Preference number: 4 (lower is better)
Translates to: NTWDYSLACSFLRTQVYSWCTWW*ALNTLP
Trigger: TGGCAGTGTGTTTAGCGCTCACCACCATGTGCACCA...AGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR TCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTATAATGATAAGGTACTaGAGGGTGATTGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRIMIRY*RVIGIP
Trigger: AGGGATCCCAATCACCCTTCAGTACCTTATCATTAT...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGGGCCTTCTGATAGGGTaGGCCACTGTCATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SEIMSIVSACFLQITHTEGLLIG*ATVMEP
Trigger: GGGCTCCATGACAGTGGCTCACCCTATCAGAAGGCC...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACCCAGGGCACAGTCCCTaGAGTGCATTTTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHPGHSP*SAFSGA
Trigger: AGCCCCTGAAAATGCACTGCAGGGACTGTGCCCTGG...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGAAGTTACAAACGAGATaGAGCTACCATGATGGTTTT +
Preference number: 4 (lower is better)
Translates to: SSCYCWGPITPSAESSNGKLQTR*SYHDGF
Trigger: AAAACCATCATGGTAGCTCCATCTCGTTTGTAACTT...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACATGATTTATAGCAAGTaGTTCTGGTTTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYMIYSK*FWFPVW
Trigger: CCAGACTGGAAACCAGAATCACTTGCTATAAATCAT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACAGTCCATGGTACTTCCTaGGGAGTGAAGCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTVHGTS*GVKLFS
Trigger: AGAAAACAGCTTCACTCCTCAGGAAGTACCATGGAC...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTGGGCACCTCTTTTGTaGAGAATCCTCAGGCTCGCG +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKEWAPLL*RILRLA
Trigger: CGCGAGCCTGAGGATTCTGCACAAAAGAGGTGCCCA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTCAATCTGGGAGCCTTaGCGACTGTGCAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKESIWEP*RLCSRC
Trigger: GCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGTCACAGAGCTCCAGTaGAATTGTCATTGTAAACCA +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINVTELQ*NCHCKP
Trigger: TGGTTTACAATGACAATTGCACTGGAGCTCTGTGAC...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGATTACAGTCTGGCATaGTCATTCCTTAGAACACAG +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINDYSLA*SFLRTQ
Trigger: CTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATC...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACAAGAGGGGCTACACTTaGTCATTTTTAAACCTTGAG +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYKRGYT*SFLNLE
Trigger: CTCAAGGTTTAAAAATGAGCAAGTGTAGCCCCTCTT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTATACTAGGTATAGGCTaGAGAGACAAAGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRILGIG*RDKGER
Trigger: TCTTTCTCCTTTGTCTCTGCAGCCTATACCTAGTAT...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTTGCGGAGGATCCTCTaGATGCTGGAATGCGCGATG +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKELRRIL*MLECAM
Trigger: CATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACTGGATCGACCAGCTGTaGCATTGTATTACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHWIDQL*HCITVV
Trigger: GACCACAGTAATACAATGCCACAGCTGGTCGATCCA...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTCTTCACTCCCCACTTaGCCCTGGGCAAACCATAAT +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCSSLPT*PWANHN
Trigger: ATTATGGTTTGCCCAGGGCCAAGTGGGGAGTGAAGA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CAA 72 bp GACTGCCCTTGCGTCCTCGCTCATGGGAGAGGTACATaGTACATTCATCAGGTCCAAAAGGTTCATAATAAT +
Preference number: 4 (lower is better)
Translates to: DCPCVLAHGRGT*YIHQVQKVHNN
Trigger: ATTATTATGAACCTTTTGGACCTGATGAATGTACAATGTACCTCTCCCATGAGCGAGGACGCAAGGGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR TCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCCCATGCCATAAACATTaGTCCTGTCACAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCPCHKH*SCHRAP
Trigger: TGGAGCTCTGTGACAGGATCAATGTTTATGGCATGG...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACGTTTATTTAACAATTTaGACCATCACCCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYVYLTI*TITLVE
Trigger: TTCCACCAGGGTGATGGTTCAAATTGTTAAATAAAC...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGGCACAGTCCCTGCAGTaGATTTTCAGGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: SEIMSIVSACFLQITHTEAQSLQ*IFRGLW
Trigger: CCACAAGCCCCTGAAAATGCACTGCAGGGACTGTGC...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACGCACAGTCCCTGCAGTaGATTTTCAGGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNAQSLQ*IFRGLW
Trigger: CCACAAGCCCCTGAAAATGCACTGCAGGGACTGTGC...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTGATTACAGTCTGGCATaGTCATTCCTTAGAACACAG +
Preference number: 4 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTDYSLA*SFLRTQ
Trigger: CTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATC...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTTGGTTCACACATCCTaGCCCCCAGGGCTTATTATT +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCLVHTS*PPGLII
Trigger: AATAATAAGCCCTGGGGGGCAGGATGTGTGAACCAA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGGGGGCCACTTTTTCCTaGAGGGTTTCCATGATGGGT +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKEGATFS*RVSMMG
Trigger: ACCCATCATGGAAACCCTCCAGGAAAAAGTGGCCCC...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTTGCGTCCTCGCTCATaGGAGAGGTACATTGTACAT +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCLRPRS*ERYIVH
Trigger: ATGTACAATGTACCTCTCCCATGAGCGAGGACGCAA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACCTGGGATTACAGTCTaGCATGCTCATTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTPGITV*HAHSLE
Trigger: TTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGG...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTTTTGAACCATCACCCTaGTGGAATTCAGGATATATT +
Preference number: 4 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRFEPSP*WNSGYI
Trigger: AATATATCCTGAATTCCACCAGGGTGATGGTTCAAA...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACCGTCATTCATGCGGATaGCACACTCTGTCTGGTCAA +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHRHSCG*HTLSGQ
Trigger: TTGACCAGACAGAGTGTGTCATCCGCATGAATGACG...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp GGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTCAGGATGATAATGATAAGGTACTaGAGGGTGATTGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: GITVWHAHSLEHRFILRMIMIRY*RVIGIP
Trigger: AGGGATCCCAATCACCCTTCAGTACCTTATCATTAT...CATCCTGAGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR TCA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCATGATTTATAGCAAGTaGTTCTGGTTTCCAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GSGKTRIQLPTTRFISTIMIYSK*FWFPVW
Trigger: CCAGACTGGAAACCAGAATCACTTGCTATAAATCAT...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGCGGTGTCTGATGCAGTaGATACCTGGGATTACAGTC +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKERCLMQ*IPGITV
Trigger: GACTGTAATCCCAGGTATTCACTGCATCAGACACCG...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTTCCCAGTGAAGCCATaGTTTTCTGAATTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCFPVKP*FSEFGL
Trigger: GAGGCCAAATTCAGAAAATCATGGCTTCACTGGGAA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACCAAATGTTCTTGTGTTaGAATAACAGAAGCCATGGA +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINQMFLC*NNRSHG
Trigger: TCCATGGCTTCTGTTATTTCAACACAAGAACATTTG...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCAGAAGGTGGGATGAGTaGGCTACAAAAGAGGGGCTA +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSRRWDE*ATKEGL
Trigger: TAGCCCCTCTTTTGTAGCTCACTCATCCCACCTTCT...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTGCATTTCAACACCCTaGGAAGGTGGGATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSCISTP*EGGMSE
Trigger: CTCACTCATCCCACCTTCTCAGGGTGTTGAAATGCA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACATAATATTAGGGCACTaGGTAGAAAGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINIILGH*VERNRV
Trigger: AACCCTGTTTCTTTCTACTCAGTGCCCTAATATTAT...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCAATATTGAATGTCCGTaGCCAGTTCTTAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: GSGKTRIQLPTTRFISTINIECP*PVLKDS
Trigger: CGAGTCTTTAAGAACTGGGCACGGACATTCAATATT...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACGGGTTTCAGCCTTTTTaGATTTGCATTTCAACACCC +
Preference number: 4 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHGFQPF*ICISTP
Trigger: GGGTGTTGAAATGCAAATGCAAAAAGGCTGAAACCC...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCATGACACACTCTGTCTaGTCAATCTGGGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSMTHSV*SIWEPC
Trigger: GCAAGGCTCCCAGATTGACCAGACAGAGTGTGTCAT...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp GGGAGAGGTACATTGTACATTCATCAGGTCCAAAAGGTTCATAATAATGATAAGATCCCTGCAGAAGTCTaGGGGCACCATGCCATAAAC +
Preference number: 4 (lower is better)
Translates to: GRGTLYIHQVQKVHNNDKIPAEV*GHHAIN
Trigger: GTTTATGGCATGGTGCCCCCAGACTTCTGCAGGGAT...CTTATCATTATTATGAACCTTTTGGACCTGATGAATGTACAATGTACCTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACTCCTCCCACCTACCATaGTCATTACTCTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNSSHLP*SLLWQD
Trigger: GTCCTGCCAGAGTAATGACCATGGTAGGTGGGAGGA...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CAA 72 bp GGCCACAAGTTTAGATTTGGGATGAAACCTAAGAGGTaGTCTGGTACAGTGACATCATTCTGCCAAAAAGGA +
Preference number: 4 (lower is better)
Translates to: GHKFRFGMKPKR*SGTVTSFCQKG
Trigger: TCCTTTTTGGCAGAATGATGTCACTGTACCAGACAACCTCTTAGGTTTCATCCCAAATCTAAACTTGTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACCCATGCCATAAACATTaGTCCTGTCACAGAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHPCHKH*SCHRAP
Trigger: TGGAGCTCTGTGACAGGATCAATGTTTATGGCATGG...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR TCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACCAATCTTACTGGCTTTaGACAGCCCAAGCCATACAC +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHQSYWL*TAQAIH
Trigger: GTGTATGGCTTGGGCTGTTCAAAGCCAGTAAGATTG...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp GGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTCAGGATGAATATTGAATGTCCGTaGCCAGTTCTTAAAGACTCG +
Preference number: 4 (lower is better)
Translates to: GITVWHAHSLEHRFILRMNIECP*PVLKDS
Trigger: CGAGTCTTTAAGAACTGGGCACGGACATTCAATATT...CATCCTGAGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACAACTGCAGCATCTTGTaGCGAGTAATCATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHNCSIL*RVIMKA
Trigger: GGCCTTCATGATTACTCGCCACAAGATGCTGCAGTT...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTTGCGTCCTCGCTCATaGGAGAGGTACATTGTACAT +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKELRPRS*ERYIVH
Trigger: ATGTACAATGTACCTCTCCCATGAGCGAGGACGCAA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACAGCCAGGGAACCCCTTaGAGCTATGTCTTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNSQGTP*SYVFCV
Trigger: CACACAAAAGACATAGCTCCAAGGGGTTCCCTGGCT...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACCTGAAGTCTGTGTCTTaGGGACCCCTCTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNLKSVS*GPLFFT
Trigger: AGTGAAGAAGAGGGGTCCCCAAGACACAGACTTCAG...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGCCTCTTCATTCTTCTaGGTATTTGAGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSASSFF*VFEREK
Trigger: CTTCTCCCTCTCAAATACTCAGAAGAATGAAGAGGC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACTTCAGACGACAGTCATaGAATGGTAGTGGGAAGACA +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHFRRQS*NGSGKT
Trigger: TGTCTTCCCACTACCATTTCATGACTGTCGTCTGAA...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACTCTTTGCCAGTCTCCTaGTTGAAGAGCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHSLPVS*LKSSSN
Trigger: GTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGA...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTCTTTGCCAGTCTCCTaGTTGAAGAGCTCATCAAAC +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSSLPVS*LKSSSN
Trigger: GTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp AATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTGTCACAGAGCTCCAGTaGAATTGTCATTGTAAACCA +
Preference number: 4 (lower is better)
Translates to: NTWDYSLACSFLRTQVYSVTELQ*NCHCKP
Trigger: TGGTTTACAATGACAATTGCACTGGAGCTCTGTGAC...AGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTTCCATAGTTTCAGCCTaGTTTTTACAAATCACACAT +
Preference number: 4 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTSIVSA*FLQITH
Trigger: ATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGA...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp GGGAGAGGTACATTGTACATTCATCAGGTCCAAAAGGTTCATAATAATGATAAGAACTGCAGCATCTTGTaGCGAGTAATCATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRGTLYIHQVQKVHNNDKNCSIL*RVIMKA
Trigger: GGCCTTCATGATTACTCGCCACAAGATGCTGCAGTT...CTTATCATTATTATGAACCTTTTGGACCTGATGAATGTACAATGTACCTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACTTTATGAAAGTCAGTaGAGATGTGCTCTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTLYESQ*RCALQK
Trigger: TTTCTGAAGAGCACATCTCCACTGACTTTCATAAAG...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTGCAGAGTCTTCAAATaGGTCAAGAAGAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSCRVFK*VKKRPQ
Trigger: TTGTGGCCTCTTCTTGACCCATTTGAAGACTCTGCA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACAAAGAGCAGTTTTCCTaGAGCCTAGGGGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHKEQFS*SLGVQK
Trigger: TTTTTGAACCCCTAGGCTTCAGGAAAACTGCTCTTT...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGAAGAGCTCATCAAACTaGAGCATCTTGTGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: SEIMSIVSACFLQITHTEKSSSN*SILWRV
Trigger: TACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTT...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR GCA 90 bp GGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTCAGGATGTTGAGTTGCTTATGTTaGAGTTTCAAAGGCAATACT +
Preference number: 4 (lower is better)
Translates to: GITVWHAHSLEHRFILRMLSCLC*SFKGNT
Trigger: AGTATTGCCTTTGAAACTGCAACATAAGCAACTCAA...CATCCTGAGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR GCA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACTTGAGTTGCTTATGTTaGAGTTTCAAAGGCAATACT +
Preference number: 4 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHLSCLC*SFKGNT
Trigger: AGTATTGCCTTTGAAACTGCAACATAAGCAACTCAA...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTGTGTTCAGAGTCCATaGTGTGGAAGACAATGTGTT +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSCVQSP*CGRQCV
Trigger: AACACATTGTCTTCCACAGCATGGACTCTGAACACA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGTCAGGGTCTTCATTTTaGGCACCTCTTTTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SEIMSIVSACFLQITHTESGSSF*APLLCR
Trigger: TCTGCACAAAAGAGGTGCCCAAAATGAAGACCCTGA...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCTCAGAGTCCATGCTGTaGAAGACAATGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSSESML*KTMCWN
Trigger: ATTCCAACACATTGTCTTCCACAGCATGGACTCTGA...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
3UTR CAA 72 bp AGTATGTTTTGGACGGCCATTTCAATCTTACTGGCTTaGAACAGCCCAAGCCATACACATCAATATCAACTT +
Preference number: 4 (lower is better)
Translates to: SMFWTAISILLA*NSPSHTHQYQL
Trigger: AAGTTGATATTGATGTGTATGGCTTGGGCTGTTCAAAGCCAGTAAGATTGAAATGGCCGTCCAAAACATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACAAAGAGCAGTTTTCCTaGAGCCTAGGGGTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNKEQFS*SLGVQK
Trigger: TTTTTGAACCCCTAGGCTTCAGGAAAACTGCTCTTT...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR TCA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATGACCTCAGAAGTCTCTaGATTGCTCAGGTTTTATGT +
Preference number: 4 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYDLRSL*IAQVLC
Trigger: ACATAAAACCTGAGCAATTCAGAGACTTCTGAGGTC...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTGCTCTTACACAAGGGCAAATATTTAGGCAGGTACTAAATGGGTGCATGTGCTCCATAGTTTCAGCCTaGTTTTTACAAATCACACAT +
Preference number: 4 (lower is better)
Translates to: FALTQGQIFRQVLNGCMCSIVSA*FLQITH
Trigger: ATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGA...GCACATGCACCCATTTAGTACCTGCCTAAATATTTGCCCTTGTGTAAGAGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCAGACAAGAATTCAATTaGCCACAACCAGGTTCATCA +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSRQEFN*PQPGSS
Trigger: TGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCT...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGACTTAGTTGCCAAATaGCCATTAACGGTAATGGAA +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSDLVAK*PLTVME
Trigger: TTCCATTACCGTTAATGGGCATTTGGCAACTAAGTC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATCAGAAGTCTCTGAATTaGTCAGGTTTTATGTGTAGC +
Preference number: 4 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYQKSLN*SGFMCS
Trigger: GCTACACATAAAACCTGAGCAATTCAGAGACTTCTG...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CCA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATGAACCATCACCCTGGTaGAATTCAGGATATATTTCT +
Preference number: 4 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYEPSPW*NSGYIS
Trigger: AGAAATATATCCTGAATTCCACCAGGGTGATGGTTC...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTGCATGTTGAAACTATaGCTTTCCAAATTTCCACAA +
Preference number: 4 (lower is better)
Translates to: EQSNLILGHFQPSFRIKECMLKL*LSKFPQ
Trigger: TTGTGGAAATTTGGAAAGGCATAGTTTCAACATGCA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR GCA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGTGATTGATTTTGTTTaGAAATTCCCGTATCTTTGC +
Preference number: 4 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSVIDFV*KFPYLC
Trigger: GCAAAGATACGGGAATTTGCAAACAAAATCAATCAC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS GCA 90 bp GTGCTGCTCTCCGCCGCCGGCTGCGAGCTGCCGGTGGCCGACGCCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCGGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VLLSAAGCELPVADA*CCCCCCCCCCCGGR
Trigger: GCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAGCCGGCGGCGGAGAGCAGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 90 bp GGTGTGCGGGATCCCCAGGCTGAGTGGCGAGCGGGCTGGCGGGCATaGTGTCACCTTGTGGTCCGCCACTCCGAGGTATCCGTCCAGTGG +
Preference number: 5 (lower is better)
Translates to: GVRDPQAEWRAGWRA*CHLVVRHSEVSVQW
Trigger: CCACTGGACGGATACCTCGGAGTGGCGGACCACAAGGTGACAGCATGCCCGCCAGCCCGCTCGCCACTCAGCCTGGGGATCCCGCACACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS CCA 90 bp GAAGGCTCAGGTGTGCGGGATCCCCAGGCTGAGTGGCGAGCGGGCTaGCGGGCATGCTGTCACCTTGTGGTCCGCCACTCCGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: EGSGVRDPQAEWRAG*RACCHLVVRHSEVS
Trigger: GGATACCTCGGAGTGGCGGACCACAAGGTGACAGCATGCCCGCCAGCCCGCTCGCCACTCAGCCTGGGGATCCCGCACACCTGAGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS TCA 90 bp GGTCATGGCGGTTGCGGAGGATCCTCTGGATGCTGGAATGCGCGATaGCCCTCAGGCTGGTGCGATTGCCCACGTCACGCCCATAGCCGC +
Preference number: 5 (lower is better)
Translates to: GHGGCGGSSGCWNAR*PSGWCDCPRHAHSR
Trigger: GCGGCTATGGGCGTGACGTGGGCAATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS GCA 90 bp TTGAGCAGGTCATGGCGGTTGCGGAGGATCCTCTGGATGCTGGAATaGGCGATGACCCTCAGGCTGGTGCGATTGCCCACGTCACGCCCA +
Preference number: 5 (lower is better)
Translates to: LSRSWRLRRILWMLE*AMTLRLVRLPTSRP
Trigger: TGGGCGTGACGTGGGCAATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGACCTGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS GCA 90 bp CGGATGACACACTCTGTCTGGTCAATCTGGGAGCCTTGCCGACTGTaGAGCAGATGCCCTGAGCTGGTCACCAGGGCACAGTCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RMTHSVWSIWEPCRL*SRCPELVTRAQSLQ
Trigger: CTGCAGGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGACCAGACAGAGTGTGTCATCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS TCA 90 bp TGTCTGGTCAATCTGGGAGCCTTGCCGACTGTGCAGCAGATGCCCTaGGCTGGTCACCAGGGCACAGTCCCTGCAGTGCATTTTCAGGGG +
Preference number: 5 (lower is better)
Translates to: CLVNLGALPTVQQMP*AGHQGTVPAVHFQG
Trigger: CCCCTGAAAATGCACTGCAGGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGACCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS GCA 90 bp CACTCTGTCTGGTCAATCTGGGAGCCTTGCCGACTGTGCAGCAGATaGCCTGAGCTGGTCACCAGGGCACAGTCCCTGCAGTGCATTTTC +
Preference number: 5 (lower is better)
Translates to: HSVWSIWEPCRLCSR*PELVTRAQSLQCIF
Trigger: GAAAATGCACTGCAGGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGACCAGACAGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS TCA 90 bp CGCCGAGGCTGCTGTACACTAGCAACAAGCTGGTGCACATGGTGGTaGGCGCTAAACACACTGCCAGACCATGGCGCATCAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RRGCCTLATSWCTWW*ALNTLPDHGASGSS
Trigger: TGAAGACCCTGATGCGCCATGGTCTGGCAGTGTGTTTAGCGCTCACCACCATGTGCACCAGCTTGTTGCTAGTGTACAGCAGCCTCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 90 bp TCATTCATGCGGATGACACACTCTGTCTGGTCAATCTGGGAGCCTTaGCGACTGTGCAGCAGATGCCCTGAGCTGGTCACCAGGGCACAG +
Preference number: 5 (lower is better)
Translates to: SFMRMTHSVWSIWEP*RLCSRCPELVTRAQ
Trigger: CTGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGACCAGACAGAGTGTGTCATCCGCATGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CCA 90 bp TTGCCAGTCTCCTGCTTGAAGAGCTCATCAAACTGCAGCATCTTGTaGCGAGTAATCATGAAGGCCTTCAGCCGGGGCAGCACCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LPVSCLKSSSNCSIL*RVIMKAFSRGSTWL
Trigger: GAGCCAGGTGCTGCCCCGGCTGAAGGCCTTCATGATTACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS-3UTR CAA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTCGGGAAGCGCGGCTGTaGCAGAGATTAGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSREARL*QRLETE
Trigger: TTCTGTCTCTAATCTCTGCAACAGCCGCGCTTCCCG...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTGTGCCCTGGCTCACGTaGAGCAGGTCATGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRVPWLT*SRSWRL
Trigger: CAACCGCCATGACCTGCTCAACGTGAGCCAGGGCAC...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp TTTCTCTGTGATAAAGCGGTGATGACTGCCCTTGCGTCCTCGCTCATGGGAGAGCGGGAAGCGCGGCTGTaGCAGAGATTAGAGACAGAA +
Preference number: 5 (lower is better)
Translates to: FLCDKAVMTALASSLMGEREARL*QRLETE
Trigger: TTCTGTCTCTAATCTCTGCAACAGCCGCGCTTCCCG...CTCTCCCATGAGCGAGGACGCAAGGGCAGTCATCACCGCTTTATCACAGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp TGGCTCAGGAAGTTCAGTGTCTCGGTGTCTGATGCAGTGAATACCTGGGATTACAGCAGGTCATGGCGGTaGCGGAGGATCCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: WLRKFSVSVSDAVNTWDYSRSWR*RRILWM
Trigger: CATCCAGAGGATCCTCCGCAACCGCCATGACCTGCT...GTAATCCCAGGTATTCACTGCATCAGACACCGAGACACTGAACTTCCTGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp AGTTCCTGCTACTGTTGGGGCCCCATCACTCCAAGTGCAGAGTCTTCAAATGGGCTAACACCTAGGCAATaGGTTCACACATCCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SSCYCWGPITPSAESSNGLTPRQ*VHTSCP
Trigger: GGGGCAGGATGTGTGAACCAATTGCCTAGGTGTTAG...CCCATTTGAAGACTCTGCACTTGGAGTGATGGGGCCCCAACAGTAGCAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS GCA 90 bp GGATATCTGTCTTTGCCAGTCTCCTGCTTGAAGAGCTCATCAAACTaGAGCATCTTGTGGCGAGTAATCATGAAGGCCTTCAGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: GYLSLPVSCLKSSSN*SILWRVIMKAFSRG
Trigger: GCCCCGGCTGAAGGCCTTCATGATTACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGACAGATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS GCA 90 bp ATCTTCCTGTCTTTGCCAGTCTCCTGCTTGAAGAGCTCATCAAACTaGAGCATCTTGTGGCGAGTAATCATGAAGGCCTTCAGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: IFLSLPVSCLKSSSN*SILWRVIMKAFSRG
Trigger: GCCCCGGCTGAAGGCCTTCATGATTACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGACAGGAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477717.6
ENST00000488940.1
CDS-3UTR CAA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTAGCAGGTCATGGCGGTaGCGGAGGATCCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTSRSWR*RRILWM
Trigger: CATCCAGAGGATCCTCCGCAACCGCCATGACCTGCT...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTTTGGAGCTATGTCTTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 5 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSLELCL*CVCVCV
Trigger: CACACACACACACACACACAAAAGACATAGCTCCAA...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTACTGAAGTCTGTGTCTaGGGGACCCCTCTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRTEVCV*GTPLLH
Trigger: GTGAAGAAGAGGGGTCCCCAAGACACAGACTTCAGT...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTAGTGGTGTAACTGAATaGAATGTTCAGCTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSSGVTE*NVQLLR
Trigger: CCTTAGGAGCTGAACATTCAATTCAGTTACACCACT...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTAAGACAAGAATTCAATaGCCCACAACCAGGTTCATC +
Preference number: 5 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSKTRIQ*PTTRFI
Trigger: GATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTT...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp AATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTTGCATTTTCAGGGGCTaGTGGTCCGCCACTCCGAGG +
Preference number: 5 (lower is better)
Translates to: NTWDYSLACSFLRTQVYSCIFRG*WSATPR
Trigger: CCTCGGAGTGGCGGACCACAAGCCCCTGAAAATGCA...AGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACGTGCCCTGGCTCACGTaGAGCAGGTCATGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNVPWLT*SRSWRL
Trigger: CAACCGCCATGACCTGCTCAACGTGAGCCAGGGCAC...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TGCACTGCTTTGTCACCCCTGGTAGGCGTCTGTCCATGGTACTTCCTGAGGAGTGGAATGCAACTAATATaGTTGAGTTGCTTATGTTGC +
Preference number: 5 (lower is better)
Translates to: CTALSPLVGVCPWYFLRSGMQLI*LSCLCC
Trigger: GCAACATAAGCAACTCAACAATATTAGTTGCATTCC...ACTCCTCAGGAAGTACCATGGACAGACGCCTACCAGGGGTGACAAAGCAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACTTGCCAGTCTCCTGCTaGAAGAGCTCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHLPVSC*KSSSNC
Trigger: GCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAA...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACAGTGCTGAGCCAAGTGTaGGATATCTGTCTTTGCCAG +
Preference number: 5 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTVLSQV*DICLCQ
Trigger: CTGGCAAAGACAGATATCCAACACTTGGCTCAGCAC...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACTCCAACTGCACTGCTTaGTCACCCCTGGTAGGCGTC +
Preference number: 5 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHSNCTA*SPLVGV
Trigger: GACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGA...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp GGGAGAGGTACATTGTACATTCATCAGGTCCAAAAGGTTCATAATAATGATAAGGTCAATCTGGGAGCCTaGCCGACTGTGCAGCAGATG +
Preference number: 5 (lower is better)
Translates to: GRGTLYIHQVQKVHNNDKVNLGA*PTVQQM
Trigger: CATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGAC...CTTATCATTATTATGAACCTTTTGGACCTGATGAATGTACAATGTACCTCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACGTCAATCTGGGAGCCTaGCCGACTGTGCAGCAGATG +
Preference number: 5 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNVNLGA*PTVQQM
Trigger: CATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGAC...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACAGTTGGATATCTGTCTTaGCCAGTCTCCTGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTVGYLS*PVSCLK
Trigger: CTTCAAGCAGGAGACTGGCAAAGACAGATATCCAAC...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp AGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACGGTAATGGAAATCACGTGCTGAGCCAAGTGTaGGATATCTTCCTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SKAQGLSCQMPINGNGNHVLSQV*DIFLSL
Trigger: CAAAGACAGGAAGATATCCAACACTTGGCTCAGCAC...GTGATTTCCATTACCGTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCTCAATCTTACTGGCTTaGAACAGCCCAAGCCATACA +
Preference number: 5 (lower is better)
Translates to: GSGKTRIQLPTTRFISTISILLA*NSPSHT
Trigger: TGTATGGCTTGGGCTGTTCAAAGCCAGTAAGATTGA...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCCGACCAGCTGTGGCATaGTATTACTGTGGTCTTAAA +
Preference number: 5 (lower is better)
Translates to: GSGKTRIQLPTTRFISTIRPAVA*YYCGLK
Trigger: TTTAAGACCACAGTAATACAATGCCACAGCTGGTCG...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp CCGGAATTTTTCCTTACAATCCAACTGCACTGCTTTGTCACCCCTGGTAGGCGTGGTTTATTTAACAATTaGAACCATCACCCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PEFFLTIQLHCFVTPGRRGLFNN*NHHPGG
Trigger: TCCACCAGGGTGATGGTTCAAATTGTTAAATAAACC...ACGCCTACCAGGGGTGACAAAGCAGTGCAGTTGGATTGTAAGGAAAAATTCCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TCTGATGCAGTGAATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACATGGGAGAGGTACATaGTACATTCATCAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: SDAVNTWDYSLACSFLRTHGRGT*YIHQVQ
Trigger: TTGGACCTGATGAATGTACAATGTACCTCTCCCATG...TGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATTCACTGCATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACTTTTGGGCACCTCTTTaGTGCAGAATCCTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHFWAPL*CRILRL
Trigger: GAGCCTGAGGATTCTGCACAAAAGAGGTGCCCAAAA...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp TGTCCGTGCCCAGTTCTTAAAGACTCGTTTCTCTGTGATAAAGCGGTGATGACTGTTGAGTTGCTTATGTaGCAGTTTCAAAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: CPCPVLKDSFLCDKAVMTVELLM*QFQRQY
Trigger: GTATTGCCTTTGAAACTGCAACATAAGCAACTCAAC...AGTCATCACCGCTTTATCACAGAGAAACGAGTCTTTAAGAACTGGGCACGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp GGTAGTGGGAAGACAAGAATTCAATTGCCCACAACCAGGTTCATCAGCACAATCCAAATTCCCGTATCTTaGCCCATAATGGCTATCTAT +
Preference number: 5 (lower is better)
Translates to: GSGKTRIQLPTTRFISTIQIPVS*PIMAIY
Trigger: ATAGATAGCCATTATGGGCAAAGATACGGGAATTTG...GATTGTGCTGATGAACCTGGTTGTGGGCAATTGAATTCTTGTCTTCCCACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp GTACACACCAGGGTTAGCAAAGCACAGGGACTTAGTTGCCAAATGCCCATTAACATTTCTGAAATGAGTTaGCTCTTACACAAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: VHTRVSKAQGLSCQMPINISEMS*LLHKGK
Trigger: TTTGCCCTTGTGTAAGAGCAAACTCATTTCAGAAAT...GTTAATGGGCATTTGGCAACTAAGTCCCTGTGCTTTGCTAACCCTGGTGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACATCAGGGTCTTCATTTaGGGCACCTCTTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHIRVFI*GTSFVQ
Trigger: CTGCACAAAAGAGGTGCCCAAAATGAAGACCCTGAT...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp GGGAGAGGTACATTGTACATTCATCAGGTCCAAAAGGTTCATAATAATGATAAGTTGCCAGTCTCCTGCTaGAAGAGCTCATCAAACTGC +
Preference number: 5 (lower is better)
Translates to: GRGTLYIHQVQKVHNNDKLPVSC*KSSSNC
Trigger: GCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAA...CTTATCATTATTATGAACCTTTTGGACCTGATGAATGTACAATGTACCTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp GATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACTCAAACTGCAGCATCTaGTGGCGAGTAATCATGAAG +
Preference number: 5 (lower is better)
Translates to: DVLFRNHVHSFSLLFTNHSNCSI*WRVIMK
Trigger: CTTCATGATTACTCGCCACAAGATGCTGCAGTTTGA...GTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGAAGAGCACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGTCAAACTGCAGCATCTaGTGGCGAGTAATCATGAAG +
Preference number: 5 (lower is better)
Translates to: EQSNLILGHFQPSFRIKESNCSI*WRVIMK
Trigger: CTTCATGATTACTCGCCACAAGATGCTGCAGTTTGA...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp AATACCTGGGATTACAGTCTGGCATGCTCATTCCTTAGAACACAGGTTTATTCTAGTGGTGTAACTGAATaGAATGTTCAGCTCCTAAGG +
Preference number: 5 (lower is better)
Translates to: NTWDYSLACSFLRTQVYSSGVTE*NVQLLR
Trigger: CCTTAGGAGCTGAACATTCAATTCAGTTACACCACT...AGAATAAACCTGTGTTCTAAGGAATGAGCATGCCAGACTGTAATCCCAGGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318803.6
CDS-3UTR CAA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACCATGGGAGAGGTACATaGTACATTCATCAGGTCCAA +
Preference number: 5 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNHGRGT*YIHQVQ
Trigger: TTGGACCTGATGAATGTACAATGTACCTCTCCCATG...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp GAACAGAGTAACCTAATTCTAGGCCATTTCCAACCATCATTCAGGATTAAAGAGAGGGTTTCAGCCTTTTaGCATTTGCATTTCAACACC +
Preference number: 5 (lower is better)
Translates to: EQSNLILGHFQPSFRIKERVSAF*HLHFNT
Trigger: GGTGTTGAAATGCAAATGCAAAAAGGCTGAAACCCT...CTCTTTAATCCTGAATGATGGTTGGAAATGGCCTAGAATTAGGTTACTCTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCCATAGCATAAATGAGTaGAATGATAGGGCATGTCCT +
Preference number: 5 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSHSINE*NDRACP
Trigger: AGGACATGCCCTATCATTCAACTCATTTATGCTATG...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TCCTCCTTTTATGGGCCATTTGAAGTGATTGATTTTGTTTGCAAATTCCCGTATTCAGCCTTTTTGCATTaGCATTTCAACACCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SSFYGPFEVIDFVCKFPYSAFLH*HFNTLR
Trigger: TCTCAGGGTGTTGAAATGCAAATGCAAAAAGGCTGA...ATACGGGAATTTGCAAACAAAATCAATCACTTCAAATGGCCCATAAAAGGAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp CCACAACCAGGTTCATCAGCACAATCTATCAGAATTCTAGTCATTTTCTTTAACGTTGAGTTGCTTATGTaGCAGTTTCAAAGGCAATAC +
Preference number: 5 (lower is better)
Translates to: PQPGSSAQSIRILVIFFNVELLM*QFQRQY
Trigger: GTATTGCCTTTGAAACTGCAACATAAGCAACTCAAC...GTTAAAGAAAATGACTAGAATTCTGATAGATTGTGCTGATGAACCTGGTTGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS-3UTR CAA 90 bp TTTATGAAAGTCAGTGGAGATGTGCTCTTCAGAAATCATGTCCATAGTTTCAGCGGAATGCAACTAATATaGTTGAGTTGCTTATGTTGC +
Preference number: 5 (lower is better)
Translates to: FMKVSGDVLFRNHVHSFSGMQLI*LSCLCC
Trigger: GCAACATAAGCAACTCAACAATATTAGTTGCATTCC...GCTGAAACTATGGACATGATTTCTGAAGAGCACATCTCCACTGACTTTCATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS-3UTR CAA 90 bp TCAGAAATCATGTCCATAGTTTCAGCCTGCTTTTTACAAATCACACATACAGAGATATTCCAGTATGTTTaGGACGGCCATTTCAATCTT +
Preference number: 5 (lower is better)
Translates to: SEIMSIVSACFLQITHTEIFQYV*DGHFNL
Trigger: AAGATTGAAATGGCCGTCCAAAACATACTGGAATAT...CTCTGTATGTGTGATTTGTAAAAAGCAGGCTGAAACTATGGACATGATTTCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000477717.6
CDS GCA 72 bp GCCGGCTGCGAGCTGCCGGTGGCCGACGCCTGCTGCTaGTGTTGCTGCTGCTGCTGCTGCTGCTGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: AGCELPVADACC*CCCCCCCCCGG
Trigger: GCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAGCCGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp GCCGCCGGCTGCGAGCTGCCGGTGGCCGACGCCTGCTaGTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: AAGCELPVADAC*CCCCCCCCCCG
Trigger: CCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAGCCGGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp GCCGACGCCTGCTGCTGCTGTTGCTGCTGCTGCTGCTaGTGCTGCGGGGGCCGCTCCTTCTGGCCGCCGAGG +
Preference number: 6 (lower is better)
Translates to: ADACCCCCCCCC*CCGGRSFWPPR
Trigger: CCTCGGCGGCCAGAAGGAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp GTGGCCGACGCCTGCTGCTGCTGTTGCTGCTGCTGCTaGTGCTGCTGCGGGGGCCGCTCCTTCTGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: VADACCCCCCCC*CCCGGRSFWPP
Trigger: CGGCGGCCAGAAGGAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp CCGGTGGCCGACGCCTGCTGCTGCTGTTGCTGCTGCTaGTGCTGCTGCTGCGGGGGCCGCTCCTTCTGGCCG +
Preference number: 6 (lower is better)
Translates to: PVADACCCCCCC*CCCCGGRSFWP
Trigger: CGGCCAGAAGGAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp TGCGAGCTGCCGGTGGCCGACGCCTGCTGCTGCTGTTaGTGCTGCTGCTGCTGCTGCTGCGGGGGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: CELPVADACCCC*CCCCCCCGGRS
Trigger: GGAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp TCCGCCGCCGGCTGCGAGCTGCCGGTGGCCGACGCCTaGTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SAAGCELPVADA*CCCCCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAGCCGGCGGCGGA
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS CAA 72 bp CTGCGAGCTGCCGGTGGCCGACGCCTGCTGCTGCTGTaGCTGCTGCTGCTGCTGCTGCTGCGGGGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: LRAAGGRRLLLL*LLLLLLLRGPL
Trigger: GAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTCGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp CTGCCGGTGGCCGACGCCTGCTGCTGCTGTTGCTGCTaGTGCTGCTGCTGCTGCGGGGGCCGCTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LPVADACCCCCC*CCCCCGGRSFW
Trigger: CCAGAAGGAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp GAGCTGCCGGTGGCCGACGCCTGCTGCTGCTGTTGCTaGTGCTGCTGCTGCTGCTGCGGGGGCCGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ELPVADACCCCC*CCCCCCGGRSF
Trigger: GAAGGAGCGGCCCCCGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGGCGTCGGCCACCGGCAGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS CAA 90 bp ATCCCCAGGCTGAGTGGCGAGCGGGCTGGCGGGCATGCTGTCACCTaGTGGTCCGCCACTCCGAGGTATCCGTCCAGTGGCCGCGGTCCC +
Preference number: 6 (lower is better)
Translates to: IPRLSGERAGGHAVT*WSATPRYPSSGRGP
Trigger: GGGACCGCGGCCACTGGACGGATACCTCGGAGTGGCGGACCACAAGGTGACAGCATGCCCGCCAGCCCGCTCGCCACTCAGCCTGGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS CCA 72 bp AGTGGCGAGCGGGCTGGCGGGCATGCTGTCACCTTGTaGTCCGCCACTCCGAGGTATCCGTCCAGTGGCCGC +
Preference number: 6 (lower is better)
Translates to: SGERAGGHAVTL*SATPRYPSSGR
Trigger: GCGGCCACTGGACGGATACCTCGGAGTGGCGGACCACAAGGTGACAGCATGCCCGCCAGCCCGCTCGCCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS GCA 72 bp GATCCCCAGGCTGAGTGGCGAGCGGGCTGGCGGGCATaGTGTCACCTTGTGGTCCGCCACTCCGAGGTATCC +
Preference number: 6 (lower is better)
Translates to: DPQAEWRAGWRA*CHLVVRHSEVS
Trigger: GGATACCTCGGAGTGGCGGACCACAAGGTGACAGCATGCCCGCCAGCCCGCTCGCCACTCAGCCTGGGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS CAA 72 bp CTGAGTGGCGAGCGGGCTGGCGGGCATGCTGTCACCTaGTGGTCCGCCACTCCGAGGTATCCGTCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LSGERAGGHAVT*WSATPRYPSSG
Trigger: GCCACTGGACGGATACCTCGGAGTGGCGGACCACAAGGTGACAGCATGCCCGCCAGCCCGCTCGCCACTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS GCA 72 bp GGCTCAGGAGATGCAGGTTGTTGTAGACCTGGCCCTTaGCGTCCCGCCGCATGTAGCTGCTGGGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: GSGDAGCCRPGP*RPAACSCWGPR
Trigger: TCTGGGGCCCCAGCAGCTACATGCGGCGGGACGGCAAGGGCCAGGTCTACAACAACCTGCATCTCCTGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS TCA 72 bp GGTTGCGGAGGATCCTCTGGATGCTGGAATGCGCGATaGCCCTCAGGCTGGTGCGATTGCCCACGTCACGCC +
Preference number: 6 (lower is better)
Translates to: GCGGSSGCWNAR*PSGWCDCPRHA
Trigger: GGCGTGACGTGGGCAATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CAA 72 bp GGGCCCCAGAAGATGAACACGGTGCCCTGGCTCACGTaGAGCAGGTCATGGCGGTTGCGGAGGATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: GPQKMNTVPWLT*SRSWRLRRILW
Trigger: CCAGAGGATCCTCCGCAACCGCCATGACCTGCTCAACGTGAGCCAGGGCACCGTGTTCATCTTCTGGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS GCA 72 bp GCAGATGCCCTGAGCTGGTCACCAGGGCACAGTCCCTaGAGTGCATTTTCAGGGGCTTGTGGTCCGCCACTC +
Preference number: 6 (lower is better)
Translates to: ADALSWSPGHSP*SAFSGACGPPL
Trigger: GAGTGGCGGACCACAAGCCCCTGAAAATGCACTGCAGGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS GCA 72 bp TCATGGCGGTTGCGGAGGATCCTCTGGATGCTGGAATaGGCGATGACCCTCAGGCTGGTGCGATTGCCCACG +
Preference number: 6 (lower is better)
Translates to: SWRLRRILWMLE*AMTLRLVRLPT
Trigger: CGTGGGCAATCGCACCAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CAA 72 bp ACGGTGCCCTGGCTCACGTTGAGCAGGTCATGGCGGTaGCGGAGGATCCTCTGGATGCTGGAATGCGCGATG +
Preference number: 6 (lower is better)
Translates to: TVPWLTLSRSWR*RRILWMLECAM
Trigger: CATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGACCTGCTCAACGTGAGCCAGGGCACCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS GCA 72 bp CACTCTGTCTGGTCAATCTGGGAGCCTTGCCGACTGTaGAGCAGATGCCCTGAGCTGGTCACCAGGGCACAG +
Preference number: 6 (lower is better)
Translates to: HSVWSIWEPCRL*SRCPELVTRAQ
Trigger: CTGTGCCCTGGTGACCAGCTCAGGGCATCTGCTGCACAGTCGGCAAGGCTCCCAGATTGACCAGACAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CCA 72 bp ACGTTGAGCAGGTCATGGCGGTTGCGGAGGATCCTCTaGATGCTGGAATGCGCGATGACCCTCAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TLSRSWRLRRIL*MLECAMTLRLV
Trigger: CACCAGCCTGAGGGTCATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGACCTGCTCAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CAA 90 bp AAGATGAACACGGTGCCCTGGCTCACGTTGAGCAGGTCATGGCGGTaGCGGAGGATCCTCTGGATGCTGGAATGCGCGATGACCCTCAGG +
Preference number: 6 (lower is better)
Translates to: KMNTVPWLTLSRSWR*RRILWMLECAMTLR
Trigger: CCTGAGGGTCATCGCGCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGACCTGCTCAACGTGAGCCAGGGCACCGTGTTCATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CCA 72 bp ATGAACACGGTGCCCTGGCTCACGTTGAGCAGGTCATaGCGGTTGCGGAGGATCCTCTGGATGCTGGAATGC +
Preference number: 6 (lower is better)
Translates to: MNTVPWLTLSRS*RLRRILWMLEC
Trigger: GCATTCCAGCATCCAGAGGATCCTCCGCAACCGCCATGACCTGCTCAACGTGAGCCAGGGCACCGTGTTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CAA 72 bp CATGGCGCATCAGGGTCTTCATTTTGGGCACCTCTTTaGTGCAGAATCCTCAGGCTCGCGCGTCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: HGASGSSFWAPL*CRILRLARPGP
Trigger: TGGCCCCGGACGCGCGAGCCTGAGGATTCTGCACAAAAGAGGTGCCCAAAATGAAGACCCTGATGCGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS GCA 72 bp GCAGATGCCCTGAGCTGGTCACCAGGGCACAGTCCCTaGAGTGCATTTTCAGGGGCTGTAACTTGTCCGTCA +
Preference number: 6 (lower is better)
Translates to: ADALSWSPGHSP*SAFSGAVTCPS
Trigger: TGACGGACAAGTTACAGCCCCTGAAAATGCACTGCAGGGACTGTGCCCTGGTGACCAGCTCAGGGCATCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488940.1
CDS CCA 72 bp GTGGGGGCGTCATTCATGCGGATGACACACTCTGTCTaGTCAATCTGGGAGCCTTGCCGACTGTGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: VGASFMRMTHSV*SIWEPCRLCSR
Trigger: TCTGCTGCACAGTCGGCAAGGCTCCCAGATTGACCAGACAGAGTGTGTCATCCGCATGAATGACGCCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CCA 72 bp GGATCAGGGAGTTCTAGTTCCAGGGCCGATTTCTGCTaGGAAATTAGGCTTTGGGGTCCACGCACCTCACCC +
Preference number: 6 (lower is better)
Translates to: GSGSSSSRADFC*EIRLWGPRTSP
Trigger: GGGTGAGGTGCGTGGACCCCAAAGCCTAATTTCCCAGCAGAAATCGGCCCTGGAACTAGAACTCCCTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS CCA 72 bp CTTCAGGAACCGGACCTCCATCCGCAGCTGCAATTCTaGGGATCAGGGAGTTCTAGTTCCAGGGCCGATTTC +
Preference number: 6 (lower is better)
Translates to: LQEPDLHPQLQF*GSGSSSSRADF
Trigger: GAAATCGGCCCTGGAACTAGAACTCCCTGATCCCCAGAATTGCAGCTGCGGATGGAGGTCCGGTTCCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS GCA 72 bp TGGGGATCAGGGAGTTCTAGTTCCAGGGCCGATTTCTaGTGGGAAATTAGGCTTTGGGGTCCACGCACCTCA +
Preference number: 6 (lower is better)
Translates to: WGSGSSSSRADF*WEIRLWGPRTS
Trigger: TGAGGTGCGTGGACCCCAAAGCCTAATTTCCCAGCAGAAATCGGCCCTGGAACTAGAACTCCCTGATCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS CCA 72 bp ACACTGCCAGACCATGGCGCATCAGGGTCTTCATTTTaGGCACCTCTTTTGTGCAGAATCCTCAGGCTCGCG +
Preference number: 6 (lower is better)
Translates to: TLPDHGASGSSF*APLLCRILRLA
Trigger: CGCGAGCCTGAGGATTCTGCACAAAAGAGGTGCCCAAAATGAAGACCCTGATGCGCCATGGTCTGGCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS CAA 72 bp CACACTGCCAGACCATGGCGCATCAGGGTCTTCATTTaGGGCACCTCTTTTGTGCAGAATCCTCAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: HTARPWRIRVFI*GTSFVQNPQAR
Trigger: GCGAGCCTGAGGATTCTGCACAAAAGAGGTGCCCAAAATGAAGACCCTGATGCGCCATGGTCTGGCAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS CAA 90 bp TCTTTGCCAGTCTCCTGCTTGAAGAGCTCATCAAACTGCAGCATCTaGTGGCGAGTAATCATGAAGGCCTTCAGCCGGGGCAGCACCTGG +
Preference number: 6 (lower is better)
Translates to: SLPVSCLKSSSNCSI*WRVIMKAFSRGSTW
Trigger: CCAGGTGCTGCCCCGGCTGAAGGCCTTCATGATTACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS TCA 72 bp TGCTGTACACTAGCAACAAGCTGGTGCACATGGTGGTaGGCGCTAAACACACTGCCAGACCATGGCGCATCA +
Preference number: 6 (lower is better)
Translates to: CCTLATSWCTWW*ALNTLPDHGAS
Trigger: TGATGCGCCATGGTCTGGCAGTGTGTTTAGCGCTCACCACCATGTGCACCAGCTTGTTGCTAGTGTACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000480428.1
ENST00000496845.1
CDS CCA 72 bp TCCTGCTTGAAGAGCTCATCAAACTGCAGCATCTTGTaGCGAGTAATCATGAAGGCCTTCAGCCGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SCLKSSSNCSIL*RVIMKAFSRGS
Trigger: GCTGCCCCGGCTGAAGGCCTTCATGATTACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CCA 72 bp AGTTCCAGGGCCGATTTCTGCTGGGAAATTAGGCTTTaGGGTCCACGCACCTCACCCCTATTTTCTACAAAA +
Preference number: 6 (lower is better)
Translates to: SSRADFCWEIRL*GPRTSPLFSTK
Trigger: TTTTGTAGAAAATAGGGGTGAGGTGCGTGGACCCCAAAGCCTAATTTCCCAGCAGAAATCGGCCCTGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS TCA 72 bp TTCAGGGGCTGTAACTTGTCCGTCAATAAGATAGTCTaGGGAGAGTCTATGACTCTGCTCTTCCCTCACGCA +
Preference number: 6 (lower is better)
Translates to: FRGCNLSVNKIV*GESMTLLFPHA
Trigger: TGCGTGAGGGAAGAGCAGAGTCATAGACTCTCCTCAGACTATCTTATTGACGGACAAGTTACAGCCCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488940.1
CDS GCA 72 bp TCTTTGCCAGTCTCCTGCTTGAAGAGCTCATCAAACTaGAGCATCTTGTGGCGAGTAATCATGAAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: SLPVSCLKSSSN*SILWRVIMKAF
Trigger: GAAGGCCTTCATGATTACTCGCCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318803.6
ENST00000477717.6
ENST00000488940.1
CDS CAA 72 bp CTTTGTGTCTTTCTCCAAATAAGAATTCATACCAAGTaGGAACTAGCCCACCCTACCCCAGCGGGTCCACTC +
Preference number: 6 (lower is better)
Translates to: LCVFLQIRIHTK*ELAHPTPAGPL
Trigger: GAGTGGACCCGCTGGGGTAGGGTGGGCTAGTTCCAACTTGGTATGAATTCTTATTTGGAGAAAGACACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496845.1
CDS GCA 72 bp CATGCCATAAACATTGATCCTGTCACAGAGCTCCAGTaGAATTGTCATTGTAAACCAGCCAGTGCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: HAINIDPVTELQ*NCHCKPASAEP
Trigger: TGGCTCAGCACTGGCTGGTTTACAATGACAATTGCACTGGAGCTCTGTGACAGGATCAATGTTTATGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318803.6
ENST00000477717.6
CDS GCA 72 bp CAAGTGTTGGATATCTTCCTGTCTTTGCCAGTCTCCTaGTTGAAGAGCTCATCAAACTGCAGCATCTTGTGG +
Preference number: 6 (lower is better)
Translates to: QVLDIFLSLPVS*LKSSSNCSILW
Trigger: CCACAAGATGCTGCAGTTTGATGAGCTCTTCAAGCAGGAGACTGGCAAAGACAGGAAGATATCCAACACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477717.6
ENST00000488940.1
CDS CCA 72 bp GGCTGTTGGAATTCTGATTCAATACGCAGCAGCATATaGCTTGGTGGTCATCACATCCAGCATATTCCATCA +
Preference number: 6 (lower is better)
Translates to: GCWNSDSIRSSI*LGGHHIQHIPS
Trigger: TGATGGAATATGCTGGATGTGATGACCACCAAGCCATATGCTGCTGCGTATTGAATCAGAATTCCAACAGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480428.1
CDS CAA 72 bp GTTGGAATTCTGATTCAATACGCAGCAGCATATGGCTaGGTGGTCATCACATCCAGCATATTCCATCATTTT +
Preference number: 6 (lower is better)
Translates to: VGILIQYAAAYG*VVITSSIFHHF
Trigger: AAAATGATGGAATATGCTGGATGTGATGACCACCAAGCCATATGCTGCTGCGTATTGAATCAGAATTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480428.1