RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST6GALNAC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000184005

Ensembl transcript IDs: ENST00000328299.4, ENST00000464140.1, ENST00000621530.1

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTaGCTCATGAAGCCAAACTCTTTTGGCTTCTGGAAGTTACTCACT +
Preference number: 1 (lower is better)
Translates to: MAELLRFNKPLSQSP*LMKPNSFGFWKLLT
Trigger: AGTGAGTAACTTCCAGAAGCCAAAAGAGTTTGGCTTCATGAGGCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR GCA 90 bp TATTCCACACACACCTTCTGCTATAGAGTGAGGGATACAATATACTaGAGAAGTCTTCATCAGAGAAAGCTACAACGAGGCAGGAGAGCA +
Preference number: 1 (lower is better)
Translates to: YSTHTFCYRVRDTIY*RSLHQRKLQRGRRA
Trigger: TGCTCTCCTGCCTCGTTGTAGCTTTCTCTGATGAAGACTTCTGCAGTATATTGTATCCCTCACTCTATAGCAGAAGGTGTGTGTGGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 90 bp GTGTTGAACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATaGAATGCCAAGTTTAAATTACTAGCAGAGTCACCATCCACATCT +
Preference number: 1 (lower is better)
Translates to: VLNLQKEHHEHNHPP*NAKFKLLAESPSTS
Trigger: AGATGTGGATGGTGACTCTGCTAGTAATTTAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGTTCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 90 bp GTAGTAAGATACTTGCACCCTGATAGCAGTTCTTGGGTCAGTGTTTaGCAATCAATCATTCTTCAAGATGGCGGAACTGCTGAGATTCAA +
Preference number: 1 (lower is better)
Translates to: VVRYLHPDSSSWVSV*QSIILQDGGTAEIQ
Trigger: TTGAATCTCAGCAGTTCCGCCATCTTGAAGAATGATTGATTGTCAAACACTGACCCAAGAACTGCTATCAGGGTGCAAGTATCTTACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR GCA 90 bp CCTCCTAAGAAAACACTGGAGTCTACATATTCCACACACACCTTCTaGTATAGAGTGAGGGATACAATATACTGCAGAAGTCTTCATCAG +
Preference number: 1 (lower is better)
Translates to: PPKKTLESTYSTHTF*YRVRDTIYCRSLHQ
Trigger: CTGATGAAGACTTCTGCAGTATATTGTATCCCTCACTCTATAGCAGAAGGTGTGTGTGGAATATGTAGACTCCAGTGTTTTCTTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 90 bp AAACACTGGAGTCTACATATTCCACACACACCTTCTGCTATAGAGTaGGGGATACAATATACTGCAGAAGTCTTCATCAGAGAAAGCTAC +
Preference number: 1 (lower is better)
Translates to: KHWSLHIPHTPSAIE*GIQYTAEVFIRESY
Trigger: GTAGCTTTCTCTGATGAAGACTTCTGCAGTATATTGTATCCCTCACTCTATAGCAGAAGGTGTGTGTGGAATATGTAGACTCCAGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 90 bp GGCAGAACCTACAATACAGATTGCTATACTTACAAGTCTGATTTGTaGCAACTGTGGCATCTGATTGTGTTTTCTAGATTTAGCAGCTTC +
Preference number: 1 (lower is better)
Translates to: GRTYNTDCYTYKSDL*QLWHLIVFSRFSSF
Trigger: GAAGCTGCTAAATCTAGAAAACACAATCAGATGCCACAGTTGTCACAAATCAGACTTGTAAGTATAGCAATCTGTATTGTAGGTTCTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CCA 90 bp CTGAAGTGTAGGATGTCCATGAAATCTTCATTGTTAATTAGGCAATaGCCTGAGGCTTTAGCTGTAGGAAATACTGTAGAAAGATGGTAT +
Preference number: 1 (lower is better)
Translates to: LKCRMSMKSSLLIRQ*PEALAVGNTVERWY
Trigger: ATACCATCTTTCTACAGTATTTCCTACAGCTAAAGCCTCAGGCCATTGCCTAATTAACAATGAAGATTTCATGGACATCCTACACTTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 90 bp AAGATGTTCTTCACCTTTATGGAAGGAAGTGAGCTTCTATTTTTCTaGAGTCTTCAAGGCGTGAACAAAAAGAGATGTATCTGTGGAGAA +
Preference number: 1 (lower is better)
Translates to: KMFFTFMEGSELLFF*SLQGVNKKRCICGE
Trigger: TTCTCCACAGATACATCTCTTTTTGTTCACGCCTTGAAGACTTCAGAAAAATAGAAGCTCACTTCCTTCCATAAAGGTGAAGAACATCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 90 bp AATCATGCAAATCTGGATTTTGCTTATGCTAAAGACTGGCTTATTTaGATAGGAGGACCAATGTTCATTTACTTCAGTGTGAATGAAGCT +
Preference number: 1 (lower is better)
Translates to: NHANLDFAYAKDWLI*IGGPMFIYFSVNEA
Trigger: AGCTTCATTCACACTGAAGTAAATGAACATTGGTCCTCCTATTCAAATAAGCCAGTCTTTAGCATAAGCAAAATCCAGATTTGCATGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCGCTGGCACTTGGCAATaGGAATGTAATGTTTGGAGA +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSAGTWQ*ECNVWR
Trigger: TCTCCAAACATTACATTCTCATTGCCAAGTGCCAGC...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR GCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCTCCACACACACCTTCTaGTATAGAGTGAGGGATACA +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSSTHTF*YRVRDT
Trigger: TGTATCCCTCACTCTATAGCAGAAGGTGTGTGTGGA...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCCAGTTGTCATGTCACTaGCCTTCATCTCAATTCCAG +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSQLSCH*PSSQFQ
Trigger: CTGGAATTGAGATGAAGGCCAGTGACATGACAACTG...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCTCCATGTGTAACAGCTaGCACTTGGCAATGAGAATG +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSSMCNS*HLAMRM
Trigger: CATTCTCATTGCCAAGTGCCAGCTGTTACACATGGA...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCGGGGATCACATTAAGTaGTGCGGCAAGATCAGGAAA +
Preference number: 2 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSGDHIK*CGKIRK
Trigger: TTTCCTGATCTTGCCGCATCACTTAATGTGATCCCC...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCCTGCAAGGATGTTTTTaGATTCTCAGCTACTCTTGC +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSLQGCF*ILSYSC
Trigger: GCAAGAGTAGCTGAGAATTCAAAAACATCCTTGCAG...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 90 bp GGCCTTCTACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTaGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCAAT +
Preference number: 2 (lower is better)
Translates to: GLLLLGRSAGPQFRL*FLPQLIHTKSSKSN
Trigger: ATTGCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTAGAAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCGATTCAACAAGCCATTaGGTCAATCACCTTGCCTCA +
Preference number: 2 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSDSTSH*VNHLAS
Trigger: TGAGGCAAGGTGATTGACTCAATGGCTTGTTGAATC...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 90 bp GATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTaGCCTCATGAAGCCAAACTCTTTTGGCTTCTGGAAGTTACTCAC +
Preference number: 2 (lower is better)
Translates to: DGGTAEIQQAIESIT*PHEAKLFWLLEVTH
Trigger: GTGAGTAACTTCCAGAAGCCAAAAGAGTTTGGCTTCATGAGGCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCACCTACAAGTGCTTCTaGAGTGAAATGTATCATTAC +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSTYKCF*SEMYHY
Trigger: GTAATGATACATTTCACTTCAGAAGCACTTGTAGGT...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGAAAGACTGGCTTATTTaGATAGGAGGACCAATGTTC +
Preference number: 2 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKKDWLI*IGGPMF
Trigger: GAACATTGGTCCTCCTATTCAAATAAGCCAGTCTTT...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGGGCCTTTATCCAAGATaGCACACTTTAATGATAGCT +
Preference number: 2 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKGLYPR*HTLMIA
Trigger: AGCTATCATTAAAGTGTGCCATCTTGGATAAAGGCC...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCCCAGAAAGAACATCATaGGCACAACCATCCTCCATG +
Preference number: 2 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSPERTS*AQPSSM
Trigger: CATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGG...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGTATGGGTGTGAATATTaGGGTGTCAAAATTGCAGAA +
Preference number: 2 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKYGCEY*GVKIAE
Trigger: TTCTGCAATTTTGACACCTCAATATTCACACCCATA...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR GCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCATTCTCAGCTACTCTTaGAGCAAATCAACCCTTTAC +
Preference number: 2 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSILSYS*SKSTLY
Trigger: GTAAAGGGTTGATTTGCTGCAAGAGTAGCTGAGAAT...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCGGCACAGAGATCAACTaGTTACTAGTTTACATAAAT +
Preference number: 2 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSGTEIN*LLVYIN
Trigger: ATTTATGTAAACTAGTAACCAGTTGATCTCTGTGCC...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 90 bp CAATCATTCTTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATaGAGTCAATCACCTTGCCTCATGAAGCCAAACTCTTTTGGCTTC +
Preference number: 2 (lower is better)
Translates to: QSFFKMAELLRFNKP*SQSPCLMKPNSFGF
Trigger: GAAGCCAAAAGAGTTTGGCTTCATGAGGCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAAGAATGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 90 bp TCTTCTCTAAGTAACAGTGATTTTCTTCTGATGGCCTTCTACTTCTaGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTC +
Preference number: 2 (lower is better)
Translates to: SSLSNSDFLLMAFYF*EGQQVPNSDSCSYL
Trigger: GAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTAGAAGGCCATCAGAAGAAAATCACTGTTACTTAGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCTGTGTTGTTGGATGTTaGAGCAGAGTTAGCAAACCC +
Preference number: 2 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSCVVGC*SRVSKP
Trigger: GGGTTTGCTAACTCTGCTTCAACATCCAACAACACA...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR GCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCCATCAGCATCACAGTTaGAGTATGGGGATCACATTA +
Preference number: 2 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCHQHHS*SMGITL
Trigger: TAATGTGATCCCCATACTGCAACTGTGATGCTGATG...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCTCTAGGCAGCTATCTTaGAAGATAATCTTCCCATTT +
Preference number: 2 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLSRQLS*KIIFPF
Trigger: AAATGGGAAGATTATCTTTCAAGATAGCTGCCTAGA...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCTCTTGGGTCAGTGTTTaGCAATCAATCATTCTTCAA +
Preference number: 2 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLSWVSV*QSIILQ
Trigger: TTGAAGAATGATTGATTGTCAAACACTGACCCAAGA...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR GCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCAGGGATACAATATACTaGAGAAGTCTTCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSRDTIY*RSLHQR
Trigger: TCTCTGATGAAGACTTCTGCAGTATATTGTATCCCT...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR GCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCTGTTGTGCTAAGACATaGAAACAACTGATACTGAAT +
Preference number: 2 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLCCAKT*KQLILN
Trigger: ATTCAGTATCAGTTGTTTGCATGTCTTAGCACAACA...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 90 bp GATAGTCAAGTAATCCTGAAGTGTAGGATGTCCATGAAATCTTCATaGTTAATTAGGCAATGGCCTGAGGCTTTAGCTGTAGGAAATACT +
Preference number: 2 (lower is better)
Translates to: DSQVILKCRMSMKSS*LIRQWPEALAVGNT
Trigger: AGTATTTCCTACAGCTAAAGCCTCAGGCCATTGCCTAATTAACAATGAAGATTTCATGGACATCCTACACTTCAGGATTACTTGACTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR TCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTCCAAGGTGTAGGAGTTaGATTGGCTGGTCTTTAAAA +
Preference number: 2 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVPRCRS*IGWSLK
Trigger: TTTTAAAGACCAGCCAATTCAACTCCTACACCTTGG...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTTTTGACCAGAATCTGTaGGAATTGATCAGAAATGTG +
Preference number: 2 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVFDQNL*ELIRNV
Trigger: CACATTTCTGATCAATTCCCACAGATTCTGGTCAAA...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTACATTAAAGGCTAGATaGGCACATTGTTGTTGTTTT +
Preference number: 2 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVTLKAR*AHCCCF
Trigger: AAAACAACAACAATGTGCCCATCTAGCCTTTAATGT...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCTTTCTTAGGTCACAGTaGTCATGTCACTGGCCTTCA +
Preference number: 3 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSFLRSQ*SCHWPS
Trigger: TGAAGGCCAGTGACATGACAACTGTGACCTAAGAAA...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCATTGAGTCAATCACCTaGCCTCATGAAGCCAAACTC +
Preference number: 3 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSIESIT*PHEAKL
Trigger: GAGTTTGGCTTCATGAGGCAAGGTGATTGACTCAAT...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCCAGAATCTGTGGGAATaGATCAGAAATGTGCATGGC +
Preference number: 3 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSQNLWE*IRNVHG
Trigger: GCCATGCACATTTCTGATCAATTCCCACAGATTCTG...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCGTGCGGTACGTAGTGTaGAACCTCCAGAAAGAACAT +
Preference number: 3 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLVRYVV*NLQKEH
Trigger: ATGTTCTTTCTGGAGGTTCAACACTACGTACCGCAC...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCGGAAGTTACTCACTGTaGAACAATTCTAGGCAGCTA +
Preference number: 3 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSGSYSL*NNSRQL
Trigger: TAGCTGCCTAGAATTGTTCAACAGTGAGTAACTTCC...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGCCAATTGCCTTTTCTTaGATAGGTTTGATAGCAATG +
Preference number: 3 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKPIAFS*IGLIAM
Trigger: CATTGCTATCAAACCTATCAAAGAAAAGGCAATTGG...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp ATTTCCTCTCCATGTGTAACAGCTGGCACTTGGCAATaGGAATGTAATGTTTGGAGAAACACACCTTGGGCC +
Preference number: 3 (lower is better)
Translates to: ISSPCVTAGTWQ*ECNVWRNTPWA
Trigger: GGCCCAAGGTGTGTTTCTCCAAACATTACATTCTCATTGCCAAGTGCCAGCTGTTACACATGGAGAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCTCATCAGCATCACAGTaGCAGTATGGGGATCACATT +
Preference number: 3 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSSSASQ*QYGDHI
Trigger: AATGTGATCCCCATACTGCAACTGTGATGCTGATGA...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp TACTTGCACCCTGATAGCAGTTCTTGGGTCAGTGTTTaGCAATCAATCATTCTTCAAGATGGCGGAACTGCT +
Preference number: 3 (lower is better)
Translates to: YLHPDSSSWVSV*QSIILQDGGTA
Trigger: AGCAGTTCCGCCATCTTGAAGAATGATTGATTGTCAAACACTGACCCAAGAACTGCTATCAGGGTGCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp TATTTCTCCACTTCAGCGTGGGGATTTGTTTCATCCTaGGCAGAATTAGCACAATTTGGAGCCCTTGGATTC +
Preference number: 3 (lower is better)
Translates to: YFSTSAWGFVSS*AELAQFGALGF
Trigger: GAATCCAAGGGCTCCAAATTGTGCTAATTCTGCTCAGGATGAAACAAATCCCCACGCTGAAGTGGAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CCA 72 bp AAAGAAAGCCCTTTCCCACCCCTCCTAAGAAAACACTaGAGTCTACATATTCCACACACACCTTCTGCTATA +
Preference number: 3 (lower is better)
Translates to: KESPFPPLLRKH*SLHIPHTPSAI
Trigger: TATAGCAGAAGGTGTGTGTGGAATATGTAGACTCCAGTGTTTTCTTAGGAGGGGTGGGAAAGGGCTTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCCCTGATATAATGTATTaGGCACAGAGATCAACTGGT +
Preference number: 3 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLPDIMY*AQRSTG
Trigger: ACCAGTTGATCTCTGTGCCAAATACATTATATCAGG...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR GCA 72 bp GCACTGTTACAACGCCCAAGGACAGTTCTGATTCGATaGCTTAGCAATTTACATGGAATTTTACTCTGGTGT +
Preference number: 3 (lower is better)
Translates to: ALLQRPRTVLIR*LSNLHGILLWC
Trigger: ACACCAGAGTAAAATTCCATGTAAATTGCTAAGGCATCGAATCAGAACTGTCCTTGGGCGTTGTAACAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCATTGAGGTGTCAAAATaGCAGAAGAGAGTAGGCAAA +
Preference number: 3 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSIEVSK*QKRVGK
Trigger: TTTGCCTACTCTCTTCTGCAATTTTGACACCTCAAT...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCAGATTCAACAAGCCATaGAGTCAATCACCTTGCCTC +
Preference number: 3 (lower is better)
Translates to: IRKRYFPILRLSSKILAPRFNKP*SQSPCL
Trigger: GAGGCAAGGTGATTGACTCAATGGCTTGTTGAATCT...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTCTTCAGCGTGGGGATTaGTTTCATCCTGAGCAGAAT +
Preference number: 3 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVLQRGD*FHPEQN
Trigger: ATTCTGCTCAGGATGAAACAAATCCCCACGCTGAAG...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp ACAGGGGCCCTAGCATATGGCCAAGACCATCCTTTGTaGTACTTTTTGTGTAATCCTGATATAATGTATTTG +
Preference number: 3 (lower is better)
Translates to: TGALAYGQDHPL*YFLCNPDIMYL
Trigger: CAAATACATTATATCAGGATTACACAAAAAGTATCACAAAGGATGGTCTTGGCCATATGCTAGGGCCCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp GATTTTCTGCACTGTTACAACGCCCAAGGACAGTTCTaGTTCGATGCCTTAGCAATTTACATGGAATTTTAC +
Preference number: 3 (lower is better)
Translates to: DFLHCYNAQGQF*FDALAIYMEFY
Trigger: GTAAAATTCCATGTAAATTGCTAAGGCATCGAATCAGAACTGTCCTTGGGCGTTGTAACAGTGCAGAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR GCA 72 bp AAAACACTGGAGTCTACATATTCCACACACACCTTCTaGTATAGAGTGAGGGATACAATATACTGCAGAAGT +
Preference number: 3 (lower is better)
Translates to: KTLESTYSTHTF*YRVRDTIYCRS
Trigger: ACTTCTGCAGTATATTGTATCCCTCACTCTATAGCAGAAGGTGTGTGTGGAATATGTAGACTCCAGTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp AGCAGAATTAGCACAATTTGGAGCCCTTGGATTCCATaGATAGACTCTTTAGTAAATCAGTTAGGCATTCTT +
Preference number: 3 (lower is better)
Translates to: SRISTIWSPWIP*IDSLVNQLGIL
Trigger: AAGAATGCCTAACTGATTTACTAAAGAGTCTATTCATGGAATCCAAGGGCTCCAAATTGTGCTAATTCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp TTCACCTTTATGGAAGGAAGTGAGCTTCTATTTTTCTaGAGTCTTCAAGGCGTGAACAAAAAGAGATGTATC +
Preference number: 3 (lower is better)
Translates to: FTFMEGSELLFF*SLQGVNKKRCI
Trigger: GATACATCTCTTTTTGTTCACGCCTTGAAGACTTCAGAAAAATAGAAGCTCACTTCCTTCCATAAAGGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR-3UTR CAA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTTCATATAGTTTTGTGTaGTTGGATGTTGAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVSYSFV*LDVEAE
Trigger: CTCTGCTTCAACATCCAACAACACAAAACTATATGA...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp TTAGCAAGTAGAGCAATCTGGAATATAACAGAACAATaGCCAAATTACAGATCATCTGCTAAAGAGAGCAGA +
Preference number: 3 (lower is better)
Translates to: LASRAIWNITEQ*PNYRSSAKESR
Trigger: TCTGCTCTCTTTAGCAGATGATCTGTAATTTGGTCATTGTTCTGTTATATTCCAGATTGCTCTACTTGCTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp CTTAGCACTAGTAAAGACCTACAAGTGCTTCTGAAGTaGAATGTATCATTACTTCCAGTTTCCAAAACATTC +
Preference number: 3 (lower is better)
Translates to: LSTSKDLQVLLK*NVSLLPVSKTF
Trigger: GAATGTTTTGGAAACTGGAAGTAATGATACATTTCACTTCAGAAGCACTTGTAGGTCTTTACTAGTGCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR TCA 72 bp AATCTGGATTTTGCTTATGCTAAAGACTGGCTTATTTaGATAGGAGGACCAATGTTCATTTACTTCAGTGTG +
Preference number: 3 (lower is better)
Translates to: NLDFAYAKDWLI*IGGPMFIYFSV
Trigger: CACACTGAAGTAAATGAACATTGGTCCTCCTATTCAAATAAGCCAGTCTTTAGCATAAGCAAAATCCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAAGCAGCGGGCGCGCCTaGGTCAGGGGCAGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLSSGRA*VRGSPG
Trigger: CCCAGGACTGCCCCTGACCCAGGCGCGCCCGCTGCT...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCTCAGGATGCAGGCCATaGCGCTCCGCCGGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLSGCRP*RSAGPP
Trigger: AGGAGGGCCGGCGGAGCGCCATGGCCTGCATCCTGA...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCGGCTCAAAGGTCACATaGAGTGCAGGGATGAGCATG +
Preference number: 4 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSGSKVT*SAGMSM
Trigger: CATGCTCATCCCTGCACTCCATGTGACCTTTGAGCC...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCTCCCGTAGACGTGAATaGCATAACAGGCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSSRRRE*HNRRPW
Trigger: CCATGGACGCCTGTTATGGCATTCACGTCTACGGGA...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACGGGCAGGCTGGAGGCTaGTACCACGGCAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHGQAGG*YHGRTS
Trigger: AGAGGTCCTGCCGTGGTACCAGCCTCCAGCCTGCCC...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCGTCCTGGGGGCAGGCTaGAGGCTGGTACCACGGCAG +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPVLGAG*RLVPRQ
Trigger: CTGCCGTGGTACCAGCCTCCAGCCTGCCCCCAGGAC...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCTGGCCTTCTACTTCTTaGAAGGTCAGCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSWPSTS*KVSRSP
Trigger: TGGGGACCTGCTGACCTTCCAAGAAGTAGAAGGCCA...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCACACTCAGCAGCTCTTaGTGTATCAATGGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSTLSSS*CINGLL
Trigger: GAGCAAGCCATTGATACACCAAGAGCTGCTGAGTGT...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCCCCTGTGCTGAGATATaGGCCAGACTGGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCPCAEI*ARLDSV
Trigger: GACAGAGTCCAGTCTGGCTCATATCTCAGCACAGGG...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGAGATATGAGCCAGACTaGACTCTGTCCTTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKRYEPD*TLSFPV
Trigger: AACTGGGAAGGACAGAGTCCAGTCTGGCTCATATCT...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCGTCTTGCGGGACATGTaGGGCTTTCATTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSVLRDM*GFHSPS
Trigger: AGAAGGTGAATGAAAGCCCCACATGTCCCGCAAGAC...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCCCAGAAAGAACATCATaGGCACAACCATCCTCCATG +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSPERTS*AQPSSM
Trigger: CATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGG...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAACTTTCTCTTCAGGATaGAGGCCATGGCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLTFSSG*RPWRSA
Trigger: GGCGGAGCGCCATGGCCTGCATCCTGAAGAGAAAGT...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCCTCGAATCATGGTCATaGGGCCGACATCTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSLESWS*GRHLLH
Trigger: ATGAAGAAGATGTCGGCCGCATGACCATGATTCGAG...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp CTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTaGTTCCTACCTCAGCTGATTCATACCAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: LLGRSAGPQFRL*FLPQLIHTKSS
Trigger: GGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCTGTTCCTACCTCAGCTaGTTCATACCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSCSYLS*FIPNPP
Trigger: TGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACA...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCTGTTCATTCTCCAAATaGAGGAGGATCGATCTATCT +
Preference number: 4 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSCSFSK*RRIDLS
Trigger: AGATAGATCGATCCTCCTGCATTTGGAGAATGAACA...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCATTCTCAGCTACTCTTaGAGCAAATCAACCCTTTAC +
Preference number: 4 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSILSYS*SKSTLY
Trigger: GTAAAGGGTTGATTTGCTGCAAGAGTAGCTGAGAAT...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCGGCCTTTATCCAAGATaGCACACTTTAATGATAGCT +
Preference number: 4 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSGLYPR*HTLMIA
Trigger: AGCTATCATTAAAGTGTGCCATCTTGGATAAAGGCC...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCTCAGTGATAAACCTATaGCCCCCATATGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCSVINL*PPYGAC
Trigger: ACATGCCCCATATGGGGGTCATAGGTTTATCACTGA...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCAGGTCACAGTCCAGTTaGAAAGGCTCTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLRSQSS*KGSCVF
Trigger: GAAGACACAAGAGCCTTTGCAACTGGACTGTGACCT...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCCATCACAGTAACTCATaGGCTTCTCTGTGGTCACGT +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCHHSNS*ASLWSR
Trigger: ACGTGACCACAGAGAAGCGCATGAGTTACTGTGATG...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCCATCAGCATCACAGTTaGAGTATGGGGATCACATTA +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSHQHHS*SMGITL
Trigger: TAATGTGATCCCCATACTGCAACTGTGATGCTGATG...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGATAGTTTCCTTGAATTaGTCCCTTACCAAGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKIVSLN*SLTKLF
Trigger: GAAGAGCTTGGTAAGGGAGCAATTCAAGGAAACTAT...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCTGTTCTTCACCTTTATaGAAGGAAGTGAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSCSSPL*KEVSFY
Trigger: ATAGAAGCTCACTTCCTTCCATAAAGGTGAAGAACA...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCAAAGGAACGCTGCTATaGAGCTCACAGCAATCACAG +
Preference number: 4 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSKGTLL*SSQQSQ
Trigger: CTGTGATTGCTGTGAGCTTCATAGCAGCGTTCCTTT...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCTTCTGGCCAACCATCTaGCCTGAGTTTGACACTATG +
Preference number: 4 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSFWPTI*PEFDTM
Trigger: CATAGTGTCAAACTCAGGTCAGATGGTTGGCCAGAA...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCGATTCAACAAGCCATTaGGTCAATCACCTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCDSTSH*VNHLAS
Trigger: TGAGGCAAGGTGATTGACTCAATGGCTTGTTGAATC...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGACCTACAAGTGCTTCTaGAGTGAAATGTATCATTAC +
Preference number: 4 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKTYKCF*SEMYHY
Trigger: GTAATGATACATTTCACTTCAGAAGCACTTGTAGGT...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCAAAGACTGGCTTATTTaGATAGGAGGACCAATGTTC +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSKDWLI*IGGPMF
Trigger: GAACATTGGTCCTCCTATTCAAATAAGCCAGTCTTT...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGCTAGAGAAGAAAACATaGGACAAGAATTTGAGTCTC +
Preference number: 4 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKLEKKT*DKNLSL
Trigger: GAGACTCAAATTCTTGTCTCATGTTTTCTTCTCTAG...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCGCCCAAGGACAGTTCTaGTTCGATGCCTTAGCAATT +
Preference number: 4 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSAQGQF*FDALAI
Trigger: AATTGCTAAGGCATCGAATCAGAACTGTCCTTGGGC...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCACACAACTCGAATCATaGTCATGCGGCCGACATCTT +
Preference number: 4 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSTQLES*SCGRHL
Trigger: AAGATGTCGGCCGCATGACCATGATTCGAGTTGTGT...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCTCATGCGCTTCTCTGTaGTCACGTATATTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLSCASL*SRIFGH
Trigger: ATGCCCAAATATACGTGACCACAGAGAAGCGCATGA...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACAGGGGCCCTAGCATATaGCCAAGACCATCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHRGPSI*PRPSFV
Trigger: CACAAAGGATGGTCTTGGCCATATGCTAGGGCCCCT...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCCTCCTAAGAAAACACTaGAGTCTACATATTCCACAC +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSLLRKH*SLHIPH
Trigger: GTGTGGAATATGTAGACTCCAGTGTTTTCTTAGGAG...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGTTTGACCAGAATCTGTaGGAATTGATCAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKFDQNL*ELIRNV
Trigger: CACATTTCTGATCAATTCCCACAGATTCTGGTCAAA...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCCTTGGGCAGCACAGTTaGTTTGAGTATGAGGACATT +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCLGQHS*FEYEDI
Trigger: AATGTCCTCATACTCAAACCAACTGTGCTGCCCAAG...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATaGAGTCAATCACCTTGCCTCATGAAGCCAAACTCT +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKP*SQSPCLMKPNS
Trigger: AGAGTTTGGCTTCATGAGGCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCTATGGGTGTGAATATTaGGGTGTCAAAATTGCAGAA +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSYGCEY*GVKIAE
Trigger: TTCTGCAATTTTGACACCTCAATATTCACACCCATA...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCCCAAGGTGTAGGAGTTaGATTGGCTGGTCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLPRCRS*IGWSLK
Trigger: TTTTAAAGACCAGCCAATTCAACTCCTACACCTTGG...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCAGCCCTTGGATTCCATaGATAGACTCTTTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSSPWIP*IDSLVN
Trigger: ATTTACTAAAGAGTCTATTCATGGAATCCAAGGGCT...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCGAGCTTCTATTTTTCTaGAGTCTTCAAGGCGTGAAC +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCELLFF*SLQGVN
Trigger: GTTCACGCCTTGAAGACTTCAGAAAAATAGAAGCTC...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTGTCAACAACAGGGCCTaGCAGTTTCACCAGGCAACC +
Preference number: 4 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVVNNRA*QFHQAT
Trigger: GGTTGCCTGGTGAAACTGGCAGGCCCTGTTGTTGAC...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp AGTAACAGTGATTTTCTTCTGATGGCCTTCTACTTCTaGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGT +
Preference number: 4 (lower is better)
Translates to: SNSDFLLMAFYF*EGQQVPNSDSC
Trigger: ACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTAGAAGGCCATCAGAAGAAAATCACTGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp CCTCCAACACTCAGCAGCTCTTGGTGTATCAATGGCTaGCTCATCCTCAATCACAAAGAGAAACTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PPTLSSSWCING*LILNHKEKLRN
Trigger: GTTTCTTAGTTTCTCTTTGTGATTGAGGATGAGCAAGCCATTGATACACCAAGAGCTGCTGAGTGTTGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACGGGGATCACATTAAGTaGTGCGGCAAGATCAGGAAA +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHGDHIK*CGKIRK
Trigger: TTTCCTGATCTTGCCGCATCACTTAATGTGATCCCC...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCGAAGTTACTCACTGTTaGACAATTCTAGGCAGCTAT +
Preference number: 4 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLEVTHC*TILGSY
Trigger: ATAGCTGCCTAGAATTGTTCAACAGTGAGTAACTTC...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAAATCACCTTGCCTCATaGAGCCAAACTCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLNHLAS*SQTLLA
Trigger: AGCCAAAAGAGTTTGGCTTCATGAGGCAAGGTGATT...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCACATGTTGTAAACGATaGCATTGCCATCTTTCCTCA +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCTCCKR*HCHLSS
Trigger: TGAGGAAAGATGGCAATGGCATCGTTTACAACATGT...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCAAAGGTCACATGGAGTaGAGGGATGAGCATGAACCC +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPKGHME*RDEHEP
Trigger: GGGTTCATGCTCATCCCTGCACTCCATGTGACCTTT...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCCTAAATGAGATTTTCTaGACTGTTACAACGCCCAAG +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCLNEIF*TVTTPK
Trigger: CTTGGGCGTTGTAACAGTGCAGAAAATCTCATTTAG...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTACTTCATAACCTTTGGTaGGGGCATTGTTCATTCTCC +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLLHNLW*GHCSFS
Trigger: GGAGAATGAACAATGCCCCCACCAAAGGTTATGAAG...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTATCCATGTGTAACAGCTaGCACTTGGCAATGAGAATG +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLSMCNS*HLAMRM
Trigger: CATTCTCATTGCCAAGTGCCAGCTGTTACACATGGA...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACTGTGTTGTTGGATGTTaGAGCAGAGTTAGCAAACCC +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHCVVGC*SRVSKP
Trigger: GGGTTTGCTAACTCTGCTTCAACATCCAACAACACA...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACGCTGGCACTTGGCAATaGGAATGTAATGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHAGTWQ*ECNVWR
Trigger: TCTCCAAACATTACATTCTCATTGCCAAGTGCCAGC...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCAGGAAAAGGAACGCTaGTATGAAGCTCACAGCAAT +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHQEKER*YEAHSN
Trigger: ATTGCTGTGAGCTTCATAGCAGCGTTCCTTTTCCTG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACTCCACACACACCTTCTaGTATAGAGTGAGGGATACA +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHSTHTF*YRVRDT
Trigger: TGTATCCCTCACTCTATAGCAGAAGGTGTGTGTGGA...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTATGCAGACTAAGTCTTaGGGGACATGTGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVMQTKS*GTCGAF
Trigger: GAAAGCCCCACATGTCCCGCAAGACTTAGTCTGCAT...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCACAGTTCTGATTCGATaGCTTAGCAATTTACATGGA +
Preference number: 4 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLTVLIR*LSNLHG
Trigger: TCCATGTAAATTGCTAAGGCATCGAATCAGAACTGT...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCGCAAAAGAGGAACGCTaGTATGGGACACAACTCGAA +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPAKEER*YGTQLE
Trigger: TTCGAGTTGTGTCCCATACCAGCGTTCCTCTTTTGC...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCCTATGACCCCCATATaGGGCATGTTCATGAAGAAA +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHPMTPI*GMFMKK
Trigger: TTTCTTCATGAACATGCCCCATATGGGGGTCATAGG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCAGTTGTCATGTCACTaGCCTTCATCTCAATTCCAG +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHQLSCH*PSSQFQ
Trigger: CTGGAATTGAGATGAAGGCCAGTGACATGACAACTG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCTTGTTAATTAGGCAATaGCCTGAGGCTTTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSLLIRQ*PEALAV
Trigger: TACAGCTAAAGCCTCAGGCCATTGCCTAATTAACAA...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCTTTCCTTTTTCACAGTaGTCACAGTTCTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCFPFSQ*SQFCSY
Trigger: ATAGCTACAGAACTGTGACCACTGTGAAAAAGGAAA...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAGAAGTCTTCAAGGCGTaGACAAAAAGAGATGTATCT +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLEVFKA*TKRDVS
Trigger: AGATACATCTCTTTTTGTTCACGCCTTGAAGACTTC...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTATGTAAACGATGCCATTaGCATCTTTCCTCATATTGC +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLCKRCH*HLSSYC
Trigger: GCAATATGAGGAAAGATGGCAATGGCATCGTTTACA...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCGTAAATATTATCCTGTaGTTCTTGGCCCATTTAGCA +
Preference number: 4 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSVNIIL*FLAHLA
Trigger: TGCTAAATGGGCCAAGAAGCACAGGATAATATTTAC...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTAGAGGAACGCTGGTATaGGACACAACTCGAATCATG +
Preference number: 4 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVRGTLV*DTTRIM
Trigger: CATGATTCGAGTTGTGTCCCATACCAGCGTTCCTCT...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCACATTAAAGGCTAGATaGGCACATTGTTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCTLKAR*AHCCCF
Trigger: AAAACAACAACAATGTGCCCATCTAGCCTTTAATGT...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTATCATTTACTTCAGTGTaGATGAAGCTTGATGCAATG +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLSFTSV*MKLDAM
Trigger: CATTGCATCAAGCTTCATTCACACTGAAGTAAATGA...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCATGAGACAAGAATTTaGGTCTCAGTACTGCCATTA +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHHETRI*VSVLPL
Trigger: TAATGGCAGTACTGAGACTCAAATTCTTGTCTCATG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAGGATTTGTTTCATCCTaGGCAGAATTAGCACAATTT +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLGFVSS*AELAQF
Trigger: AAATTGTGCTAATTCTGCTCAGGATGAAACAAATCC...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp GTAATCCTGAAGTGTAGGATGTCCATGAAATCTTCATaGTTAATTAGGCAATGGCCTGAGGCTTTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: VILKCRMSMKSS*LIRQWPEALAV
Trigger: TACAGCTAAAGCCTCAGGCCATTGCCTAATTAACAATGAAGATTTCATGGACATCCTACACTTCAGGATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACTCTAGGCAGCTATCTTaGAAGATAATCTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHSRQLS*KIIFPF
Trigger: AAATGGGAAGATTATCTTTCAAGATAGCTGCCTAGA...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCAAGTGCTTCTGAAGTaGAATGTATCATTACTTCCA +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHQVLLK*NVSLLP
Trigger: TGGAAGTAATGATACATTTCACTTCAGAAGCACTTG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCCTATACTTACAAGTCTaGTTTGTGACAACTGTGGCA +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPLYLQV*FVTTVA
Trigger: TGCCACAGTTGTCACAAATCAGACTTGTAAGTATAG...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACATTAACACTACCAGGTaGAGTACTTTAGTGTTGTCT +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHINTTR*STLVLS
Trigger: AGACAACACTAAAGTACTTCACCTGGTAGTGTTAAT...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTATGTTGTGCTAAGACATaGAAACAACTGATACTGAAT +
Preference number: 4 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLCCAKT*KQLILN
Trigger: ATTCAGTATCAGTTGTTTGCATGTCTTAGCACAACA...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp CAATTCCAGTTAAATTATAAAGTGCGGTACGTAGTGTaGAACCTCCAGAAAGAACATCATGAGCACAACCAT +
Preference number: 4 (lower is better)
Translates to: QFQLNYKVRYVV*NLQKEHHEHNH
Trigger: ATGGTTGTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATTTAACTGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCGACAACTGTGGCATCTaGTTGTGTTTTCTAGATTTA +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPDNCGI*LCFLDL
Trigger: TAAATCTAGAAAACACAATCAGATGCCACAGTTGTC...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCTAGCTTTATTCTTCTaGCCAGCTTTTGAATATGAT +
Preference number: 4 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHLALFF*PAFEYD
Trigger: ATCATATTCAAAAGCTGGCCAGAAGAATAAAGCTAG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR TCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTTCTTGGGTCAGTGTTTaGCAATCAATCATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVSWVSV*QSIILQ
Trigger: TTGAAGAATGATTGATTGTCAAACACTGACCCAAGA...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR GCA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTTATACCCTTCTGTCTTaGAGTAGGTGTCATTTATCA +
Preference number: 4 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVYTLLS*SRCHLS
Trigger: TGATAAATGACACCTACTGCAAGACAGAAGGGTATA...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCGGCACAGAGATCAACTaGTTACTAGTTTACATAAAT +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPGTEIN*LLVYIN
Trigger: ATTTATGTAAACTAGTAACCAGTTGATCTCTGTGCC...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CCA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCAAAGAGATGTATCTGTaGAGAAAGAAGAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: IRKRYFPILRLSSKILAPKEMYL*RKKRFS
Trigger: AGAAAACCTCTTCTTTCTCCACAGATACATCTCTTT...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp CATTCTGCAAGGATGTTTTTGAATTCTCAGCTACTCTaGCAGCAAATCAACCCTTTACTATTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: HSARMFLNSQLL*QQINPLLFNEQ
Trigger: TTGCTCATTAAATAGTAAAGGGTTGATTTGCTGCAAGAGTAGCTGAGAATTCAAAAACATCCTTGCAGAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
3UTR CAA 72 bp AGAAATAGCTCTCACTTCATAGGCAAATATGTGAACTaGGTAGTTGACTGTTTATTCATCAAGATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: RNSSHFIGKYVN*VVDCLFIKMFF
Trigger: GAAGAACATCTTGATGAATAAACAGTCAACTACCAAGTTCACATATTTGCCTATGAAGTGAGAGCTATTTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CCA 90 bp CGAGCAGCGGGCGCGCCTGGGTCAGGGGCAGTCCTGGGGGCAGGCTaGAGGCTGGTACCACGGCAGGACCTCTCCAGCCCACATTCCCGC +
Preference number: 5 (lower is better)
Translates to: RAAGAPGSGAVLGAG*RLVPRQDLSSPHSR
Trigger: GCGGGAATGTGGGCTGGAGAGGTCCTGCCGTGGTACCAGCCTCCAGCCTGCCCCCAGGACTGCCCCTGACCCAGGCGCGCCCGCTGCTCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS GCA 90 bp GACTTTCTCTTCAGGATGCAGGCCATGGCGCTCCGCCGGCCCTCCTaGCACCGAGCAGCGGGCGCGCCTGGGTCAGGGGCAGTCCTGGGG +
Preference number: 5 (lower is better)
Translates to: DFLFRMQAMALRRPS*HRAAGAPGSGAVLG
Trigger: CCCCAGGACTGCCCCTGACCCAGGCGCGCCCGCTGCTCGGTGGCAGGAGGGCCGGCGGAGCGCCATGGCCTGCATCCTGAAGAGAAAGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCCCTTTGGTGGGGGCATaGTTCATTCTCCAAATGCAG +
Preference number: 5 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSPLVGA*FILQMQ
Trigger: CTGCATTTGGAGAATGAACAATGCCCCCACCAAAGG...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS TCA 90 bp CAGGAGGATCGATCTATCTCATTTCCCACCTTCTGGCCAACCATCTaGCCTGAGTTTGACACTATGGCACAAAGGTCACAGTCCAGTTGC +
Preference number: 5 (lower is better)
Translates to: QEDRSISFPTFWPTI*PEFDTMAQRSQSSC
Trigger: GCAACTGGACTGTGACCTTTGTGCCATAGTGTCAAACTCAGGTCAGATGGTTGGCCAGAAGGTGGGAAATGAGATAGATCGATCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS GCA 90 bp GCAAAAGAGGAACGCTGGTATGGGACACAACTCGAATCATGGTCATaGGGCCGACATCTTCTTCATAACCTTTGGTGGGGGCATTGTTCA +
Preference number: 5 (lower is better)
Translates to: AKEERWYGTQLESWS*GRHLLHNLWWGHCS
Trigger: TGAACAATGCCCCCACCAAAGGTTATGAAGAAGATGTCGGCCGCATGACCATGATTCGAGTTGTGTCCCATACCAGCGTTCCTCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCATGGCCTTCTACTTCTaGGAAGGTCAGCAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLMAFYF*EGQQVP
Trigger: GGGGACCTGCTGACCTTCCAAGAAGTAGAAGGCCAT...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS GCA 90 bp TTCCTTCCTTCCTTTTGTGGTGGGGCAGGACATGTATGTGGTGGTTaGTGTTCGATCAATCAACACTGCATGGTCACTCTGTACTGTCCT +
Preference number: 5 (lower is better)
Translates to: FLPSFCGGAGHVCGG*CSINQHCMVTLYCP
Trigger: AGGACAGTACAGAGTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS CCA 90 bp CATTTCCCACCTTCTGGCCAACCATCTGACCTGAGTTTGACACTATaGCACAAAGGTCACAGTCCAGTTGCAAAGGCTCTTGTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: HFPPSGQPSDLSLTL*HKGHSPVAKALVSS
Trigger: TGAAGACACAAGAGCCTTTGCAACTGGACTGTGACCTTTGTGCCATAGTGTCAAACTCAGGTCAGATGGTTGGCCAGAAGGTGGGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS-3UTR CAA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGTCATCAGCATCACAGTaGCAGTATGGGGATCACATT +
Preference number: 5 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKSSASQ*QYGDHI
Trigger: AATGTGATCCCCATACTGCAACTGTGATGCTGATGA...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp TGCGGGACATGTGGGGCTTTCATTCACCTTCTAGAAGGGTATCTGGGCTCAAAGCAGAATCTGTGGGAATaGATCAGAAATGTGCATGGC +
Preference number: 5 (lower is better)
Translates to: CGTCGAFIHLLEGYLGSKQNLWE*IRNVHG
Trigger: GCCATGCACATTTCTGATCAATTCCCACAGATTCTG...CTTTGAGCCCAGATACCCTTCTAGAAGGTGAATGAAAGCCCCACATGTCCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS TCA 90 bp CTTCATTTACAAGACGCACAACCAGCAGGAAAAGGAACGCTGCTATaGAGCTCACAGCAATCACAGACTTTCTCTTCAGGATGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: LHLQDAQPAGKGTLL*SSQQSQTFSSGCRP
Trigger: TGGCCTGCATCCTGAAGAGAAAGTCTGTGATTGCTGTGAGCTTCATAGCAGCGTTCCTTTTCCTGCTGGTTGTGCGTCTTGTAAATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CCA 90 bp CTCGAATCATGGTCATGCGGCCGACATCTTCTTCATAACCTTTGGTaGGGGCATTGTTCATTCTCCAAATGCAGGAGGATCGATCTATCT +
Preference number: 5 (lower is better)
Translates to: LESWSCGRHLLHNLW*GHCSFSKCRRIDLS
Trigger: AGATAGATCGATCCTCCTGCATTTGGAGAATGAACAATGCCCCCACCAAAGGTTATGAAGAAGATGTCGGCCGCATGACCATGATTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CCA 90 bp CAACTCGAATCATGGTCATGCGGCCGACATCTTCTTCATAACCTTTaGTGGGGGCATTGTTCATTCTCCAAATGCAGGAGGATCGATCTA +
Preference number: 5 (lower is better)
Translates to: QLESWSCGRHLLHNL*WGHCSFSKCRRIDL
Trigger: TAGATCGATCCTCCTGCATTTGGAGAATGAACAATGCCCCCACCAAAGGTTATGAAGAAGATGTCGGCCGCATGACCATGATTCGAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS-3UTR CAA 90 bp CACCTTCTAGAAGGGTATCTGGGCTCAAAGGTCACATGGAGTGCAGGGATGAGCATGCAAATCTGGATTTaGCTTATGCTAAAGACTGGC +
Preference number: 5 (lower is better)
Translates to: HLLEGYLGSKVTWSAGMSMQIWI*LMLKTG
Trigger: GCCAGTCTTTAGCATAAGCAAAATCCAGATTTGCAT...GCTCATCCCTGCACTCCATGTGACCTTTGAGCCCAGATACCCTTCTAGAAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS GCA 90 bp CATCTTCTTCATAACCTTTGGTGGGGGCATTGTTCATTCTCCAAATaGAGGAGGATCGATCTATCTCATTTCCCACCTTCTGGCCAACCA +
Preference number: 5 (lower is better)
Translates to: HLLHNLWWGHCSFSK*RRIDLSHFPPSGQP
Trigger: TGGTTGGCCAGAAGGTGGGAAATGAGATAGATCGATCCTCCTGCATTTGGAGAATGAACAATGCCCCCACCAAAGGTTATGAAGAAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CCA 90 bp TTTATTCCTTCCTTCCTTTTGTGGTGGGGCAGGACATGTATGTGGTaGTTGCTGTTCGATCAATCAACACTGCATGGTCACTCTGTACTG +
Preference number: 5 (lower is better)
Translates to: FIPSFLLWWGRTCMW*LLFDQSTLHGHSVL
Trigger: CAGTACAGAGTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGAAGGAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCAACACTCAGCAGCTCTaGGTGTATCAATGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLNTQQL*VYQWLA
Trigger: AGCAAGCCATTGATACACCAAGAGCTGCTGAGTGTT...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCATTGAGTCAATCACCTaGCCTCATGAAGCCAAACTC +
Preference number: 5 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCIESIT*PHEAKL
Trigger: GAGTTTGGCTTCATGAGGCAAGGTGATTGACTCAAT...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp TTCAAGATGGCGGAACTGCTGAGATTCAACAAGCCATTGAGTCAATCACCTTGCAGATTCAACAAGCCATaGAGTCAATCACCTTGCCTC +
Preference number: 5 (lower is better)
Translates to: FKMAELLRFNKPLSQSPCRFNKP*SQSPCL
Trigger: GAGGCAAGGTGATTGACTCAATGGCTTGTTGAATCT...GCAAGGTGATTGACTCAATGGCTTGTTGAATCTCAGCAGTTCCGCCATCTTGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCCACAATTTGGAGCCCTaGGATTCCATGAATAGACTC +
Preference number: 5 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLHNLEP*DSMNRL
Trigger: GAGTCTATTCATGGAATCCAAGGGCTCCAAATTGTG...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS GCA 90 bp ATTCACTTCATTTACAAGACGCACAACCAGCAGGAAAAGGAACGCTaGTATGAAGCTCACAGCAATCACAGACTTTCTCTTCAGGATGCA +
Preference number: 5 (lower is better)
Translates to: IHFIYKTHNQQEKER*YEAHSNHRLSLQDA
Trigger: TGCATCCTGAAGAGAAAGTCTGTGATTGCTGTGAGCTTCATAGCAGCGTTCCTTTTCCTGCTGGTTGTGCGTCTTGTAAATGAAGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCATTATCCTGTGCTTCTaGGCCCATTTAGCAAACACT +
Preference number: 5 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLIILCF*AHLANT
Trigger: AGTGTTTGCTAAATGGGCCAAGAAGCACAGGATAAT...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp TACTTCTTGGAAGGTCAGCAGGTCCCCAATTCAGACTCTTGTTCCTACCTCAGCTTCTTGGGTCAGTGTTaGACAATCAATCATTCTTCA +
Preference number: 5 (lower is better)
Translates to: YFLEGQQVPNSDSCSYLSFLGQC*TINHSS
Trigger: TGAAGAATGATTGATTGTCAAACACTGACCCAAGAA...GCTGAGGTAGGAACAAGAGTCTGAATTGGGGACCTGCTGACCTTCCAAGAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTACCCCAATTCAGACTCTaGTTCCTACCTCAGCTGATT +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLPQFRL*FLPQLI
Trigger: AATCAGCTGAGGTAGGAACAAGAGTCTGAATTGGGG...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTACTTCAGCGTGGGGATTaGTTTCATCCTGAGCAGAAT +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLLQRGD*FHPEQN
Trigger: ATTCTGCTCAGGATGAAACAAATCCCCACGCTGAAG...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCCATCTGACCTGAGTTaGACACTATGGCACAAAGGT +
Preference number: 5 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHPSDLS*TLWHKG
Trigger: ACCTTTGTGCCATAGTGTCAAACTCAGGTCAGATGG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTATGTGGTCACGTATATTaGGGCATTCGGATAGATACC +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLCGHVY*GIRIDT
Trigger: GGTATCTATCCGAATGCCCAAATATACGTGACCACA...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS TCA 90 bp TTAGCATCATCAGCATCACAGTTGCAGTATGGGGATCACATTAAGTaGTGCGGCAAGATCAGGAAAACCATTATCAAGACAATGTCCAGT +
Preference number: 5 (lower is better)
Translates to: LASSASQLQYGDHIK*CGKIRKTIIKTMSS
Trigger: ACTGGACATTGTCTTGATAATGGTTTTCCTGATCTTGCCGCATCACTTAATGTGATCCCCATACTGCAACTGTGATGCTGATGATGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAGGAAGTTACTCACTGTaGAACAATTCTAGGCAGCTA +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLGSYSL*NNSRQL
Trigger: TAGCTGCCTAGAATTGTTCAACAGTGAGTAACTTCC...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp GTCCAGTTTATAACTACAGGCAAGTCACTTCACCTCTGTCTGTTTCCTCAGCTCTCCATGAAATCTTCATaGTTAATTAGGCAATGGCCT +
Preference number: 5 (lower is better)
Translates to: VQFITTGKSLHLCLFPQLSMKSS*LIRQWP
Trigger: AGGCCATTGCCTAATTAACAATGAAGATTTCATGGA...GAGCTGAGGAAACAGACAGAGGTGAAGTGACTTGCCTGTAGTTATAAACTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCCCTGATATAATGTATTaGGCACAGAGATCAACTGGT +
Preference number: 5 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSPDIMY*AQRSTG
Trigger: ACCAGTTGATCTCTGTGCCAAATACATTATATCAGG...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAGGCAAAATAGTTTCCTaGAATTGCTCCCTTACCAAG +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLGKIVS*NCSLTK
Trigger: CTTGGTAAGGGAGCAATTCAAGGAAACTATTTTGCC...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ATTAGGAAGAGATATTTTCCCATCCTTAGGCTAAGTAGTAAGATACTTGCACCCAGAATGGTATCCACTTaGTACCAGGTTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: IRKRYFPILRLSSKILAPRMVST*YQVVQS
Trigger: GCTTTGGACAACCTGGTACAAAGTGGATACCATTCT...GGGTGCAAGTATCTTACTACTTAGCCTAAGGATGGGAAAATATCTCTTCCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTACAGTTGCAAAGGCTCTaGTGTCTTCACATTTATGTA +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLQLQRL*CLHIYV
Trigger: TACATAAATGTGAAGACACAAGAGCCTTTGCAACTG...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAACACTCATCTCTTCCTaGTTCATAATAATGGTAGGG +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLTLISS*FIIMVG
Trigger: CCCTACCATTATTATGAACAAGGAAGAGATGAGTGT...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp ACCTCCAGAAAGAACATCATGAGCACAACCATCCTCCATGAAATGCCAAGTTTAATTGAGGTGTCAAAATaGCAGAAGAGAGTAGGCAAA +
Preference number: 5 (lower is better)
Translates to: TSRKNIMSTTILHEMPSLIEVSK*QKRVGK
Trigger: TTTGCCTACTCTCTTCTGCAATTTTGACACCTCAAT...TAAACTTGGCATTTCATGGAGGATGGTTGTGCTCATGATGTTCTTTCTGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp CAATTCAGACTCTTGTTCCTACCTCAGCTGATTCATACCAAATCCTCCAAGAGCGGCAAATATGTGAACTaGGTAGTTGACTGTTTATTC +
Preference number: 5 (lower is better)
Translates to: QFRLLFLPQLIHTKSSKSGKYVN*VVDCLF
Trigger: GAATAAACAGTCAACTACCAAGTTCACATATTTGCC...GCTCTTGGAGGATTTGGTATGAATCAGCTGAGGTAGGAACAAGAGTCTGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CCA 90 bp GATGCGGCAAGATCAGGAAAACCATTATCAAGACAATGTCCAGTTTaGATGTGTAAATATTATCCTGTGCTTCTTGGCCCATTTAGCAAA +
Preference number: 5 (lower is better)
Translates to: DAARSGKPLSRQCPV*MCKYYPVLLGPFSK
Trigger: TTTGCTAAATGGGCCAAGAAGCACAGGATAATATTTACACATCCAAACTGGACATTGTCTTGATAATGGTTTTCCTGATCTTGCCGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CCA 90 bp TTTGTTTCTTTCTTTCTTTCTTTTATTCCTTCCTTCCTTTTGTGGTaGGGCAGGACATGTATGTGGTGGTTGCTGTTCGATCAATCAACA +
Preference number: 5 (lower is better)
Translates to: FVSFFLSFIPSFLLW*GRTCMWWLLFDQST
Trigger: TGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGAAGGAATAAAAGAAAGAAAGAAAGAAACAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS-3UTR CAA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTCCATCTTTCCTCATATaGCGGAAAGGTCCCCAAATA +
Preference number: 5 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVPSFLI*RKGPQI
Trigger: TATTTGGGGACCTTTCCGCAATATGAGGAAAGATGG...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTTTTCTTAGGTCACAGTaGTCATGTCACTGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVFLRSQ*SCHWPS
Trigger: TGAAGGCCAGTGACATGACAACTGTGACCTAAGAAA...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACTCATATAGTTTTGTGTaGTTGGATGTTGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHSYSFV*LDVEAE
Trigger: CTCTGCTTCAACATCCAACAACACAAAACTATATGA...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACCCAATTGCCTTTTCTTaGATAGGTTTGATAGCAATG +
Preference number: 5 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHPIAFS*IGLIAM
Trigger: CATTGCTATCAAACCTATCAAAGAAAAGGCAATTGG...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp AATTATAAAGTGCGGTACGTAGTGTTGAACCTCCAGAAAGAACATCATGAGCACTCTTCTGGCCAGCTTTaGAATATGATTTTACGTACT +
Preference number: 5 (lower is better)
Translates to: NYKVRYVVLNLQKEHHEHSSGQL*NMILRT
Trigger: AGTACGTAAAATCATATTCAAAAGCTGGCCAGAAGA...GTGCTCATGATGTTCTTTCTGGAGGTTCAACACTACGTACCGCACTTTATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS-3UTR CAA 90 bp AATATACTATTTCTGAGCCACAAGAACCATTTTCAGAGGCCAGTGTATGTAGTTAATTCTCAGCTACTCTaGCAGCAAATCAACCCTTTA +
Preference number: 5 (lower is better)
Translates to: NILFLSHKNHFQRPVYVVNSQLL*QQINPL
Trigger: TAAAGGGTTGATTTGCTGCAAGAGTAGCTGAGAATT...AACTACATACACTGGCCTCTGAAAATGGTTCTTGTGGCTCAGAAATAGTATATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS GCA 90 bp CATTATCAAGACAATGTCCAGTTTGGATGTGTAAATATTATCCTGTaGTTCTTGGCCCATTTAGCAAACACTTTCTTTTCAGTGATAAAC +
Preference number: 5 (lower is better)
Translates to: HYQDNVQFGCVNIIL*FLAHLANTFFSVIN
Trigger: GTTTATCACTGAAAAGAAAGTGTTTGCTAAATGGGCCAAGAAGCACAGGATAATATTTACACATCCAAACTGGACATTGTCTTGATAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CCA 72 bp CAGCAATCACAGACTTTCTCTTCAGGATGCAGGCCATaGCGCTCCGCCGGCCCTCCTGCCACCGAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: QQSQTFSSGCRP*RSAGPPATEQR
Trigger: CCGCTGCTCGGTGGCAGGAGGGCCGGCGGAGCGCCATGGCCTGCATCCTGAAGAGAAAGTCTGTGATTGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS TCA 72 bp GGCCAGAAGGAAGGTAAACCACCCTGTGCTGAGATATaGGCCAGACTGGACTCTGTCCTTCCCAGTTTCCTT +
Preference number: 6 (lower is better)
Translates to: GQKEGKPPCAEI*ARLDSVLPSFL
Trigger: AAGGAAACTGGGAAGGACAGAGTCCAGTCTGGCTCATATCTCAGCACAGGGTGGTTTACCTTCCTTCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS GCA 72 bp GAACGCTGGTATGGGACACAACTCGAATCATGGTCATaGGGCCGACATCTTCTTCATAACCTTTGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: ERWYGTQLESWS*GRHLLHNLWWG
Trigger: CCCCCACCAAAGGTTATGAAGAAGATGTCGGCCGCATGACCATGATTCGAGTTGTGTCCCATACCAGCGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS GCA 72 bp TCCTTTTGTGGTGGGGCAGGACATGTATGTGGTGGTTaGTGTTCGATCAATCAACACTGCATGGTCACTCTG +
Preference number: 6 (lower is better)
Translates to: SFCGGAGHVCGG*CSINQHCMVTL
Trigger: CAGAGTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS CCA 72 bp GTGAGTTCGAAGGGGCCGCCTGTATGTGTAGGAGAATaGTATCCACTTTGTACCAGGTTGTCCAAAGCAGTT +
Preference number: 6 (lower is better)
Translates to: VSSKGPPVCVGE*YPLCTRLSKAV
Trigger: AACTGCTTTGGACAACCTGGTACAAAGTGGATACCATTCTCCTACACATACAGGCGGCCCCTTCGAACTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328299.4
ENST00000621530.1
CDS CCA 72 bp TGGTCATGCGGCCGACATCTTCTTCATAACCTTTGGTaGGGGCATTGTTCATTCTCCAAATGCAGGAGGATC +
Preference number: 6 (lower is better)
Translates to: WSCGRHLLHNLW*GHCSFSKCRRI
Trigger: GATCCTCCTGCATTTGGAGAATGAACAATGCCCCCACCAAAGGTTATGAAGAAGATGTCGGCCGCATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CCA 72 bp TCCTTCCTTTTGTGGTGGGGCAGGACATGTATGTGGTaGTTGCTGTTCGATCAATCAACACTGCATGGTCAC +
Preference number: 6 (lower is better)
Translates to: SFLLWWGRTCMW*LLFDQSTLHGH
Trigger: GTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS CAA 72 bp CATTTCCCACCTTCTGGCCAACCATCTGACCTGAGTTaGACACTATGGCACAAAGGTCACAGTCCAGTTGCA +
Preference number: 6 (lower is better)
Translates to: HFPPSGQPSDLS*TLWHKGHSPVA
Trigger: TGCAACTGGACTGTGACCTTTGTGCCATAGTGTCAAACTCAGGTCAGATGGTTGGCCAGAAGGTGGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CAA 90 bp ATTCCTTCCTTCCTTTTGTGGTGGGGCAGGACATGTATGTGGTGGTaGCTGTTCGATCAATCAACACTGCATGGTCACTCTGTACTGTCC +
Preference number: 6 (lower is better)
Translates to: IPSFLLWWGRTCMWW*LFDQSTLHGHSVLS
Trigger: GGACAGTACAGAGTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGAAGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS CCA 72 bp AAAGAGGAACGCTGGTATGGGACACAACTCGAATCATaGTCATGCGGCCGACATCTTCTTCATAACCTTTGG +
Preference number: 6 (lower is better)
Translates to: KEERWYGTQLES*SCGRHLLHNLW
Trigger: CCAAAGGTTATGAAGAAGATGTCGGCCGCATGACCATGATTCGAGTTGTGTCCCATACCAGCGTTCCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CAA 72 bp GGGGCCGCCTGTATGTGTAGGAGAATGGTATCCACTTaGTACCAGGTTGTCCAAAGCAGTTTAGTAGCAATG +
Preference number: 6 (lower is better)
Translates to: GAACMCRRMVST*YQVVQSSLVAM
Trigger: CATTGCTACTAAACTGCTTTGGACAACCTGGTACAAAGTGGATACCATTCTCCTACACATACAGGCGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328299.4
ENST00000621530.1
CDS CAA 72 bp TTCCTTTTGTGGTGGGGCAGGACATGTATGTGGTGGTaGCTGTTCGATCAATCAACACTGCATGGTCACTCT +
Preference number: 6 (lower is better)
Translates to: FLLWWGRTCMWW*LFDQSTLHGHS
Trigger: AGAGTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS CAA 90 bp GATCTATCTCATTTCCCACCTTCTGGCCAACCATCTGACCTGAGTTaGACACTATGGCACAAAGGTCACAGTCCAGTTGCAAAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: DLSHFPPSGQPSDLS*TLWHKGHSPVAKAL
Trigger: AAGAGCCTTTGCAACTGGACTGTGACCTTTGTGCCATAGTGTCAAACTCAGGTCAGATGGTTGGCCAGAAGGTGGGAAATGAGATAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CAA 90 bp GAGTTCGAAGGGGCCGCCTGTATGTGTAGGAGAATGGTATCCACTTaGTACCAGGTTGTCCAAAGCAGTTTAGTAGCAATGGGAAATTCA +
Preference number: 6 (lower is better)
Translates to: EFEGAACMCRRMVST*YQVVQSSLVAMGNS
Trigger: TGAATTTCCCATTGCTACTAAACTGCTTTGGACAACCTGGTACAAAGTGGATACCATTCTCCTACACATACAGGCGGCCCCTTCGAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328299.4
ENST00000621530.1
CDS GCA 72 bp CATAACCTTTGGTGGGGGCATTGTTCATTCTCCAAATaGAGGAGGATCGATCTATCTCATTTCCCACCTTCT +
Preference number: 6 (lower is better)
Translates to: HNLWWGHCSFSK*RRIDLSHFPPS
Trigger: AGAAGGTGGGAAATGAGATAGATCGATCCTCCTGCATTTGGAGAATGAACAATGCCCCCACCAAAGGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CCA 72 bp TATGTGGTGGTTGCTGTTCGATCAATCAACACTGCATaGTCACTCTGTACTGTCCTTCCCAGTTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: YVVVAVRSINTA*SLCTVLPSFLL
Trigger: AAGAAGGAAACTGGGAAGGACAGTACAGAGTGACCATGCAGTGTTGATTGATCGAACAGCAACCACCACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS TCA 72 bp TCAGCATCACAGTTGCAGTATGGGGATCACATTAAGTaGTGCGGCAAGATCAGGAAAACCATTATCAAGACA +
Preference number: 6 (lower is better)
Translates to: SASQLQYGDHIK*CGKIRKTIIKT
Trigger: TGTCTTGATAATGGTTTTCCTGATCTTGCCGCATCACTTAATGTGATCCCCATACTGCAACTGTGATGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CAA 72 bp GTTTCTTTCTTTCTTTCTTTTATTCCTTCCTTCCTTTaGTGGTGGGGCAGGACATGTATGTGGTGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: VSFFLSFIPSFL*WWGRTCMWWLL
Trigger: CAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGAAGGAATAAAAGAAAGAAAGAAAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS CAA 72 bp ACAGTAACTCATGCGCTTCTCTGTGGTCACGTATATTaGGGCATTCGGATAGATACCAACTGTCTTTTTCAA +
Preference number: 6 (lower is better)
Translates to: TVTHALLCGHVY*GIRIDTNCLFQ
Trigger: TTGAAAAAGACAGTTGGTATCTATCCGAATGCCCAAATATACGTGACCACAGAGAAGCGCATGAGTTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CAA 90 bp AACTCCATCACAGTAACTCATGCGCTTCTCTGTGGTCACGTATATTaGGGCATTCGGATAGATACCAACTGTCTTTTTCAACATGTTGTA +
Preference number: 6 (lower is better)
Translates to: NSITVTHALLCGHVY*GIRIDTNCLFQHVV
Trigger: TACAACATGTTGAAAAAGACAGTTGGTATCTATCCGAATGCCCAAATATACGTGACCACAGAGAAGCGCATGAGTTACTGTGATGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328299.4
ENST00000464140.1
ENST00000621530.1
CDS CAA 90 bp TGTTTGTTTGTTTCTTTCTTTCTTTCTTTTATTCCTTCCTTCCTTTaGTGGTGGGGCAGGACATGTATGTGGTGGTTGCTGTTCGATCAA +
Preference number: 6 (lower is better)
Translates to: CLFVSFFLSFIPSFL*WWGRTCMWWLLFDQ
Trigger: TTGATCGAACAGCAACCACCACATACATGTCCTGCCCCACCACAAAAGGAAGGAAGGAATAAAAGAAAGAAAGAAAGAAACAAACAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464140.1
CDS GCA 72 bp GACAATGTCCAGTTTGGATGTGTAAATATTATCCTGTaGTTCTTGGCCCATTTAGCAAACACTTTCTTTTCA +
Preference number: 6 (lower is better)
Translates to: DNVQFGCVNIIL*FLAHLANTFFS
Trigger: TGAAAAGAAAGTGTTTGCTAAATGGGCCAAGAAGCACAGGATAATATTTACACATCCAAACTGGACATTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4
CDS CAA 72 bp GTCCAGTTTGGATGTGTAAATATTATCCTGTGCTTCTaGGCCCATTTAGCAAACACTTTCTTTTCAGTGATA +
Preference number: 6 (lower is better)
Translates to: VQFGCVNIILCF*AHLANTFFSVI
Trigger: TATCACTGAAAAGAAAGTGTTTGCTAAATGGGCCAAGAAGCACAGGATAATATTTACACATCCAAACTGGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328299.4