RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST6GALNAC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000070526

Ensembl transcript IDs: ENST00000156626.12, ENST00000359088.9, ENST00000585633.1, ENST00000588375.1, ENST00000589813.5, ENST00000589992.1, ENST00000590878.1, ENST00000590915.1, ENST00000592042.5

Found 582 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGATGCACCGGAGGCTCCCAGCGGGGAGGCTGGCCAGGAGCAGCTaGTGCTGGGGCACTGGAGGGAAGCGTGTCACGACCTTCTGCACC +
Preference number: 1 (lower is better)
Translates to: VMHRRLPAGRLARSS*CWGTGGKRVTTFCT
Trigger: GGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCTCCCCGCTGGGAGCCTCCGGTGCATCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTaGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: VLCGAPCPAPPAVPG*PPFLCLRWCGPWAG
Trigger: CCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CCA 90 bp CTCTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTaGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGC +
Preference number: 1 (lower is better)
Translates to: LCAVWGTLSCSSGGA*LASFPLSPVVWALG
Trigger: GCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CCA 90 bp GGAGCAGGCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTaGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTA +
Preference number: 1 (lower is better)
Translates to: GAGKETMAALAPVSS*LWQFRDQDAGTAGL
Trigger: TAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp GGCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTaGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTT +
Preference number: 1 (lower is better)
Translates to: GKETMAALAPVSSWL*QFRDQDAGTAGLSL
Trigger: AAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp ACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCAGCCCTaGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACG +
Preference number: 1 (lower is better)
Translates to: TVSCALEQARRPWQP*PRSVLGFGSSGTRT
Trigger: CGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp TGCCCTGGTGCTTCTCTGACACCGTCCTGGAGGCCGTCAGCTTCCTaGTCTGGCCCCCATTTCCTTGGGTCGTCTTTGTGTCCTGGCTCT +
Preference number: 1 (lower is better)
Translates to: CPGASLTPSWRPSAS*SGPHFLGSSLCPGS
Trigger: AGAGCCAGGACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGAAGCACCAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR GCA 90 bp CTTTTGGGAATGAGCGTCTTGGCTGTGGTTGCCGCTTTGCCCTGGTaGTTCTCTGACACCGTCCTGGAGGCCGTCAGCTTCCTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: LLGMSVLAVVAALPW*FSDTVLEAVSFLVW
Trigger: CCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp GGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTaGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACT +
Preference number: 1 (lower is better)
Translates to: GPGQFLALAVPGPGR*YSRIIPSSCSRFQT
Trigger: AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp AAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATaGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGG +
Preference number: 1 (lower is better)
Translates to: KIPTVSCALEQARRP*QPWPRSVLGFGSSG
Trigger: CCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR GCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTaGCTTGGAGCAGGCAAGGAGACCATGGCAGCCCTGGCCCCGGTC +
Preference number: 1 (lower is better)
Translates to: PWEMAKESQDSHCIL*LGAGKETMAALAPV
Trigger: GACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp ACCGTCCTGGAGGCCGTCAGCTTCCTGGTCTGGCCCCCATTTCCTTaGGTCGTCTTTGTGTCCTGGCTCTTCCATGATTGTGCCTCTGTC +
Preference number: 1 (lower is better)
Translates to: TVLEAVSFLVWPPFP*VVFVSWLFHDCASV
Trigger: GACAGAGGCACAATCATGGAAGAGCCAGGACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp GGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTC +
Preference number: 1 (lower is better)
Translates to: GNGQRVSRFPLYPVP*SRQGDHGSPGPGQF
Trigger: GAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp AGCTTCCTGGTCTGGCCCCCATTTCCTTGGGTCGTCTTTGTGTCCTaGCTCTTCCATGATTGTGCCTCTGTCCTGCCAGAGGCCATCCCT +
Preference number: 1 (lower is better)
Translates to: SFLVWPPFPWVVFVS*LFHDCASVLPEAIP
Trigger: AGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAAGAGCCAGGACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 90 bp CTCGTCCTTGTTGACACTGCTCCTGTGGGAGCCAGCATTCTGTGCTaGCTTTTGGGAATGAGCGTCTTGGCTGTGGTTGCCGCTTTGCCC +
Preference number: 1 (lower is better)
Translates to: LVLVDTAPVGASILC*LLGMSVLAVVAALP
Trigger: GGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGCTCCCACAGGAGCAGTGTCAACAAGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp AAGCCAAAGGGTGGTGCAAAGTGTTCCAGGCGGTCCCACTCACTCTaGTTGAAGTGTCTGGAGTCCAGGAAGAGAGTGAGGTTGGGCAGA +
Preference number: 1 (lower is better)
Translates to: KPKGGAKCSRRSHSL*LKCLESRKRVRLGR
Trigger: TCTGCCCAACCTCACTCTCTTCCTGGACTCCAGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 90 bp TGCCTCTGTCCTGCCAGAGGCCATCCCTGCATCTTGCCCTCTGGGTaGCAGTGTGTTCACCATGGTTTTCTCTTTTTCTGGGCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: CLCPARGHPCILPSG*QCVHHGFLFFWALP
Trigger: TGGAAGAGCCCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 90 bp CCCAAGAGGCACGTTCTTGAAACCCCGATTGCCCAATATAAGGAGTaGCTGGGTCAGGGAGAAGGCGGTAAAGCCGTAGAAGGATGTCCG +
Preference number: 1 (lower is better)
Translates to: PKRHVLETPIAQYKE*LGQGEGGKAVEGCP
Trigger: CGGACATCCTTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp GACCTTCTGCACCAAGGAGTAGTTGAGCTCCATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCGGTCCCACTCACTCTGGTTGAAGTG +
Preference number: 1 (lower is better)
Translates to: DLLHQGVVELHEAKG*CKVFQAVPLTLVEV
Trigger: CACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCAACTACTCCTTGGTGCAGAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR GCA 90 bp CTTCTGCACCAAGGAGTAGTTGAGCTCCATGAAGCCAAAGGGTGGTaGAAAGTGTTCCAGGCGGTCCCACTCACTCTGGTTGAAGTGTCT +
Preference number: 1 (lower is better)
Translates to: LLHQGVVELHEAKGW*KVFQAVPLTLVEVS
Trigger: AGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCAACTACTCCTTGGTGCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp ATTGTGCCTCTGTCCTGCCAGAGGCCATCCCTGCATCTTGCCCTCTaGGTGACAGTGTGTTCACCATGGTTTTCTCTTTTTCTGGGCTCT +
Preference number: 1 (lower is better)
Translates to: IVPLSCQRPSLHLAL*VTVCSPWFSLFLGS
Trigger: AGAGCCCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 90 bp GGTTGGGCAGAAAGAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTaGTCTTCACAGAGTCAGGGCAAGTCGTCTGAAGGCCTCCTATTT +
Preference number: 1 (lower is better)
Translates to: GWAERVSGATATWRL*SSQSQGKSSEGLLF
Trigger: AAATAGGAGGCCTTCAGACGACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR GCA 90 bp TTCCATGATTGTGCCTCTGTCCTGCCAGAGGCCATCCCTGCATCTTaGCCTCTGGGTGACAGTGTGTTCACCATGGTTTTCTCTTTTTCT +
Preference number: 1 (lower is better)
Translates to: FHDCASVLPEAIPAS*PLGDSVFTMVFSFS
Trigger: AGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGGACAGAGGCACAATCATGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 90 bp TTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAG +
Preference number: 1 (lower is better)
Translates to: LELLKGLELSLSHGK*PKSLKIPTVSCALE
Trigger: CTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR TCA 90 bp AATGTTCTCTGTGCGTTGATGCCCTGTGGAATGCTAAGCAACTGTTaGAAGAAGGGAGTGGACCTGTATGTCCCGACATGGAAAGATGTC +
Preference number: 1 (lower is better)
Translates to: NVLCALMPCGMLSNC*KKGVDLYVPTWKDV
Trigger: GACATCTTTCCATGTCGGGACATACAGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCATTCCACAGGGCATCAACGCACAGAGAACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR TCA 90 bp CTCCAGCTTGAAGTCATGGTTTATGTAAAAGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATCAGAAAAGCGCTCATGGCCCTCAGT +
Preference number: 1 (lower is better)
Translates to: LQLEVMVYVKDQPLP*CIIVVIRKALMALS
Trigger: ACTGAGGGCCATGAGCGCTTTTCTGATCACTACTATGATACATCATGGAAGCGGCTGATCTTTTACATAAACCATGACTTCAAGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR TCA 90 bp TTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAAAGATCAGCCGCTTCCATGATGTAT +
Preference number: 1 (lower is better)
Translates to: LSLHRVAASRLLSPA*SHGLCKRSAASMMY
Trigger: ATACATCATGGAAGCGGCTGATCTTTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 90 bp AATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTC +
Preference number: 1 (lower is better)
Translates to: NCGIGHPSPHLIKNP*PQDLQQCTEELQNL
Trigger: GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR TCA 90 bp AATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTG +
Preference number: 1 (lower is better)
Translates to: NVLKNFRTSISHLPS*ESLVHGSSVPLELL
Trigger: CAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTGTCTCCGGTGGTGTaGGCCTTGGGCTGGGTTTGT +
Preference number: 2 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLLSPVV*ALGWVC
Trigger: ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAG...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR CCA 90 bp AAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGCAGGAGGGCCCCAGTaGTGGGGCGGTATATCCTCC +
Preference number: 2 (lower is better)
Translates to: KETMAALAPVSSWLWQFRAGGPQ*WGGISS
Trigger: GGAGGATATACCGCCCCACCACTGGGGCCCTCCTGC...CCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CAA 90 bp TGGAGCAGGCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATT +
Preference number: 2 (lower is better)
Translates to: WSRQGDHGSPGPGQF*ALAVPGPGRWYSRI
Trigger: AATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR GCA 90 bp TGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCGATGGTTGTCCTCCTTaGCCTTGTGGGTGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: CGAPCPAPPAVPGWPPFLDGCPP*PCGCLG
Trigger: TCCCAGGCACCCACAAGGGCAAGGAGGACAACCATC...GAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CAA 90 bp AGGCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCT +
Preference number: 2 (lower is better)
Translates to: RQGDHGSPGPGQFLA*AVPGPGRWYSRIIP
Trigger: AGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTGCTGGGTTTGTGTGTTaGGGGCATTGTTCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: VLCGAPCPAPPAVPGWPPAGFVC*GHCSLA
Trigger: TGCCAGAGAACAATGCCCTCAACACACAAACCCAGC...AGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR CCA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTCTGGCTCTGCATAGATaGTTGTCCTCCTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: VLCGAPCPAPPAVPGWPPLALHR*LSSLPL
Trigger: CAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAG...AGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CAA 90 bp GGTGCCTGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTaGGGCTGGGTTTGTGTGTTGAGGGCATTGTTCTCTGGCACTGGC +
Preference number: 2 (lower is better)
Translates to: GAWLASFPLSPVVWA*GWVCVLRALFSGTG
Trigger: GCCAGTGCCAGAGAACAATGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR GCA 90 bp CCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGACCTTGCCCTTGTGGGTaGCTGGGACTTAGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: PVSSWLWQFRDQDAGTAGPCPCG*LGLRLC
Trigger: GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGG...TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR TCA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTATTCCCTTGGAACTCCTaGAGGGCTTGGAGCTTAGTC +
Preference number: 2 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVFPWNS*RAWSLV
Trigger: GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAA...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR GCA 90 bp CTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGCCCTTGCCCTTGTGGGTaGCTGGGACTTAGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: LSSVSGGVGLGLGLCVEGPCPCG*LGLRLC
Trigger: GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGG...GCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR GCA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACTCTGGCACTGGCTCTaGATAGATGGTTGTCCTCCT +
Preference number: 2 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVLWHWL*IDGCPP
Trigger: AGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAG...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp TTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: FGSSGTRTLVQPDYPFIVGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...CACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCTGCGTTGATGCCCTGTaGAATGCTAAGCAACTGTTG +
Preference number: 2 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLCVDAL*NAKQLL
Trigger: CAACAGTTGCTTAGCATTCCACAGGGCATCAACGCA...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR-3UTR TCA 90 bp TGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCATGCTAAGCAACTGTTaGAAGAAGGGAGTGGACCTG +
Preference number: 2 (lower is better)
Translates to: CGAPCPAPPAVPGWPPFLMLSNC*KKGVDL
Trigger: CAGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCAT...GAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR-3UTR CCA 90 bp CCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGACTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 2 (lower is better)
Translates to: PVSSWLWQFRDQDAGTAGLYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CAA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: GKWPKSLKIPTVSCA*EQARRPWQPWPRSV
Trigger: AACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp CCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 2 (lower is better)
Translates to: PRSVLGFGSSGTRTLVQPSHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...CGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR GCA 90 bp GCATCTTGCCCTCTGGGTGACAGTGTGTTCACCATGGTTTTCTCTTTTTCTGGGTGGGGCACCTTGTCCTaGTCCTCCGGCGGTGCCTGG +
Preference number: 2 (lower is better)
Translates to: ASCPLGDSVFTMVFSFSGWGTLS*SSGGAW
Trigger: CCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA...CCCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR CCA 90 bp GGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: GTAGLSLHRVAASRLLSPGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...TGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp GCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCTCAGAAAAGCGCTCATaGCCCTCAGTGATGAAGCCA +
Preference number: 2 (lower is better)
Translates to: ARRPWQPWPRSVLGFGSSSEKRS*PSVMKP
Trigger: TGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGA...GGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp GGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 2 (lower is better)
Translates to: GFGSSGTRTLVQPDYPFIAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...GATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR GCA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAACTGCTCCTCCGGCGGTaGCTGGTTGGCCTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQLLLRR*LVGLLS
Trigger: GGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAG...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTAAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVRESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp GAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTAGCAGGAGGGCCCCAGTaGTGGGGCGGTATATCCTCC +
Preference number: 2 (lower is better)
Translates to: ELSLSHGKWPKSLKIPTVAGGPQ*WGGISS
Trigger: GGAGGATATACCGCCCCACCACTGGGGCCCTCCTGC...TACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTTGAAAGAAGGGAGTaGACCTGTATGTCCCGACAT +
Preference number: 2 (lower is better)
Translates to: WLASFPLSPVVWALGWVCVERRE*TCMSRH
Trigger: ATGTCGGGACATACAGGTCCACTCCCTTCTTTCAAC...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR-3UTR CCA 90 bp CCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGAATTGTTCTCTGGCACTaGCTCTGCATAGATGGTTGT +
Preference number: 2 (lower is better)
Translates to: PVSSWLWQFRDQDAGTAGIVLWH*LCIDGC
Trigger: ACAACCATCTATGCAGAGCCAGTGCCAGAGAACAAT...TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR TCA 90 bp ACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGCTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAA +
Preference number: 2 (lower is better)
Translates to: TMAALAPVSSWLWQFRDQLLSPA*SHGLCK
Trigger: TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAG...CTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR GCA 90 bp GAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCATCCCACTGTATCCTGTaGCTTGGAGCAGGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: EFLEPQRLGGFDLHRVRASHCIL*LGAGKE
Trigger: CTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGA...TGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp GGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGACTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 2 (lower is better)
Translates to: GQRVSRFPLYPVPWSRQGLYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...TCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACGCCCTTGTGGGTGCCTaGGACTTAGGCTTTGCCAGG +
Preference number: 2 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDALVGA*DLGFAR
Trigger: CCTGGCAAAGCCTAAGTCCCAGGCACCCACAAGGGC...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTCAGAAAAGCGCTCATaGCCCTCAGTGATGAAGCCA +
Preference number: 2 (lower is better)
Translates to: TAGLSLHRVAASRLLSPASEKRS*PSVMKP
Trigger: TGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGA...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 2 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR GCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTCCTCAATTAGCCATTTaGCATCTTGAGAGAGTCTTG +
Preference number: 2 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTPQLAI*HLERVL
Trigger: CAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGG...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCCTGGCTCTGCATAGATaGTTGTCCTCCTTGCCCTTG +
Preference number: 2 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSLALHR*LSSLPL
Trigger: CAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAG...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CAA 90 bp AGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAG +
Preference number: 2 (lower is better)
Translates to: SLVHGSSVPLELLKG*ELSLSHGKWPKSLK
Trigger: CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 2 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQSHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 2 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDLYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CCA 90 bp AAAGCCGTAGAAGGATGTCCGAGTCCCCACATCCTGTTCGTAGCCTTTAATGAGAAGGGGCAGGAACAATaGCTGTTTCAGCAGCTACTC +
Preference number: 2 (lower is better)
Translates to: KAVEGCPSPHILFVAFNEKGQEQ*LFQQLL
Trigger: GAGTAGCTGCTGAAACAGCCATTGTTCCTGCCCCTT...CTCATTAAAGGCTACGAACAGGATGTGGGGACTCGGACATCCTTCTACGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTTGGCCCCCATTTCCTTaGGTCGTCTTTGTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: PFAILRESCPWFKCSLGTWPPFP*VVFVSW
Trigger: CCAGGACACAAAGACGACCCAAGGAAATGGGGGCCA...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CAA 90 bp ATTTCGAAGCTGTATTTTTCCTCAAAATCCCACCGAGGCTCAGATTaGAAGTTGGCGGCCTTCAGTCTTTGGTTTCTCTGCGTCGTGGGG +
Preference number: 2 (lower is better)
Translates to: ISKLYFSSKSHRGSD*KLAAFSLWFLCVVG
Trigger: CCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACAGCTTCGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR TCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 2 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR GCA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTTCCCACTGTATCCTGTaGCTTGGAGCAGGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPSHCIL*LGAGKE
Trigger: CTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGA...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTCTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 2 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSILYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CCA 90 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: LKGLELSLSHGKWPKSLKRESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTaGAGGGCTTGGAGCTTAGTC +
Preference number: 2 (lower is better)
Translates to: EPQLAICHLERVLSMVQVFPWNS*RAWSLV
Trigger: GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAA...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR TCA 90 bp AAAGCCGTAGAAGGATGTCCGAGTCCCCACATCCTGTTCGTAGCCTTTAATGAGGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATC +
Preference number: 2 (lower is better)
Translates to: KAVEGCPSPHILFVAFNEDQPLP*CIIVVI
Trigger: GATCACTACTATGATACATCATGGAAGCGGCTGATC...CTCATTAAAGGCTACGAACAGGATGTGGGGACTCGGACATCCTTCTACGGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR GCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTTCCCACTGTATCCTGTaGCTTGGAGCAGGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: TSEPQLAICHLERVLSMVSHCIL*LGAGKE
Trigger: CTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGA...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACTTTCAGCAGGAATTGTaGTATTGGCCACCCATCACC +
Preference number: 2 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDFQQEL*YWPPIT
Trigger: GGTGATGGGTGGCCAATACCACAATTCCTGCTGAAA...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR TCA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 2 (lower is better)
Translates to: WKSVFQQELWYWPPITPFSHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR TCA 90 bp GCATCTTGCCCTCTGGGTGACAGTGTGTTCACCATGGTTTTCTCTTTTTCTGGGCCTACAGCAATGTACTaGAGAACTTCAGAACCTCAA +
Preference number: 2 (lower is better)
Translates to: ASCPLGDSVFTMVFSFSGPTAMY*RTSEPQ
Trigger: TTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGG...CCCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 2 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSRESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CCA 90 bp GTTGGGCAGAAAGAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACTTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAA +
Preference number: 2 (lower is better)
Translates to: VGQKEFLEPQRLGGFDLHLIKNP*PQDLQQ
Trigger: TTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAA...GTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTTTCAGCAGGAATTGTaGTATTGGCCACCCATCACC +
Preference number: 2 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIFQQEL*YWPPIT
Trigger: GGTGATGGGTGGCCAATACCACAATTCCTGCTGAAA...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR TCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAA +
Preference number: 2 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDLLSPA*SHGLCK
Trigger: TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAG...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CCA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATCTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATT +
Preference number: 2 (lower is better)
Translates to: KSVFQQELWYWPPITPFNLSHGK*PKSLKI
Trigger: AATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAG...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR GCA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCCCTCAATTAGCCATTTaGCATCTTGAGAGAGTCTTG +
Preference number: 2 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGPQLAI*HLERVL
Trigger: CAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGG...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATTTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAA +
Preference number: 2 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYLIKNP*PQDLQQ
Trigger: TTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAA...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR GCA 72 bp CGGAGGCTCCCAGCGGGGAGGCTGGCCAGGAGCAGCTaGTGCTGGGGCACTGGAGGGAAGCGTGTCACGACC +
Preference number: 3 (lower is better)
Translates to: RRLPAGRLARSS*CWGTGGKRVTT
Trigger: GGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCTCCTGGCCAGCCTCCCCGCTGGGAGCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp GGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTaGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: GAPCPAPPAVPG*PPFLCLRWCGP
Trigger: AGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CCA 72 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTaGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: VWGTLSCSSGGA*LASFPLSPVVW
Trigger: CCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR GCA 72 bp TGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTaGCTGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGT +
Preference number: 3 (lower is better)
Translates to: CCVGHLVLLLRR*LVGLLSSVSGG
Trigger: ACCACCGGAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CCA 72 bp ACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTaGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGA +
Preference number: 3 (lower is better)
Translates to: TMAALAPVSSWL*QFRDQDAGTAG
Trigger: TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTGCTCTGCATAGATGGTaGTCCTCCTTGCCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: VLCGAPCPAPPAVPGWPPALHRW*SSLPLW
Trigger: CCACAAGGGCAAGGAGGACAACCATCTATGCAGAGC...AGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR CAA 90 bp AGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGGCTCTGCATAGATGGTaGTCCTCCTTGCCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SPGPGQFLALAVPGPGRWALHRW*SSLPLW
Trigger: CCACAAGGGCAAGGAGGACAACCATCTATGCAGAGC...CCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp TGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGGGCTGGGTTTGTGTGTaGAGGGCATTGTTCTCTGGC +
Preference number: 3 (lower is better)
Translates to: WGTLSCSSGGAWLASFPLGWVCV*RALFSG
Trigger: GCCAGAGAACAATGCCCTCAACACACAAACCCAGCC...CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR CAA 90 bp CCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATGGCCCATGTGGGAGTaGTTCAGGATGCCCCCGTTG +
Preference number: 3 (lower is better)
Translates to: PVSSWLWQFRDQDAGTAGWPMWE*FRMPPL
Trigger: CAACGGGGGCATCCTGAACAACTCCCACATGGGCCA...TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp AAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTaGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACA +
Preference number: 3 (lower is better)
Translates to: KETMAALAPVSS*LWQFRDQDAGT
Trigger: TGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 72 bp TTGCCGCTTTGCCCTGGTGCTTCTCTGACACCGTCCTaGAGGCCGTCAGCTTCCTGGTCTGGCCCCCATTTC +
Preference number: 3 (lower is better)
Translates to: LPLCPGASLTPS*RPSASWSGPHF
Trigger: GAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp GGAATGAGCGTCTTGGCTGTGGTTGCCGCTTTGCCCTaGTGCTTCTCTGACACCGTCCTGGAGGCCGTCAGC +
Preference number: 3 (lower is better)
Translates to: GMSVLAVVAALP*CFSDTVLEAVS
Trigger: GCTGACGGCCTCCAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR GCA 72 bp ATGAGCGTCTTGGCTGTGGTTGCCGCTTTGCCCTGGTaGTTCTCTGACACCGTCCTGGAGGCCGTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: MSVLAVVAALPW*FSDTVLEAVSF
Trigger: GAAGCTGACGGCCTCCAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp ACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATaGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: TVSCALEQARRP*QPWPRSVLGFG
Trigger: GCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 72 bp AGGAGGGCCCCAGTGGTGGGGCGGTATATCCTCCAGTaGGCACCATCCAGGGTCTTAGACCTCAGAAACCTG +
Preference number: 3 (lower is better)
Translates to: RRAPVVGRYILQ*APSRVLDLRNL
Trigger: CAGGTTTCTGAGGTCTAAGACCCTGGATGGTGCCCACTGGAGGATATACCGCCCCACCACTGGGGCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp AAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 3 (lower is better)
Translates to: KETMAALAPVSSWLWQFRTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...CCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGAGATGGTTGTCCTCCTaGCCCTTGTGGGTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SFPLSPVVWALGWVCVLRRWLSS*PLWVPG
Trigger: CCCAGGCACCCACAAGGGCAAGGAGGACAACCATCT...CCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CCA 72 bp GCTTCTCTGACACCGTCCTGGAGGCCGTCAGCTTCCTaGTCTGGCCCCCATTTCCTTGGGTCGTCTTTGTGT +
Preference number: 3 (lower is better)
Translates to: ASLTPSWRPSAS*SGPHFLGSSLC
Trigger: ACACAAAGACGACCCAAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp TGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGAATGCTAAGCAACTGTaGAAAGAAGGGAGTGGACCT +
Preference number: 3 (lower is better)
Translates to: WGTLSCSSGGAWLASFPLNAKQL*KEGSGP
Trigger: AGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCATT...CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR CCA 72 bp CAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTaGTACAGCCGGATTATCCCTTCATCGTGTAGCCGC +
Preference number: 3 (lower is better)
Translates to: QFLALAVPGPGR*YSRIIPSSCSR
Trigger: GCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CCA 72 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTaGGTTTGTGTGTTGAGGGCATTGTTCTCTGGCACT +
Preference number: 3 (lower is better)
Translates to: SFPLSPVVWALG*VCVLRALFSGT
Trigger: AGTGCCAGAGAACAATGCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CCA 72 bp CGAGGCTCAGATTTGAAGTTGGCGGCCTTCAGTCTTTaGTTTCTCTGCGTCGTGGGGCTCTGGAAAGGGGCA +
Preference number: 3 (lower is better)
Translates to: RGSDLKLAAFSL*FLCVVGLWKGA
Trigger: TGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp AAAGCCGTAGAAGGATGTCCGAGTCCCCACATCCTGTTCGTAGCCTTTAATGAGGCGTCTTGGCTGTGGTaGCCGCTTTGCCCTGGTGCT +
Preference number: 3 (lower is better)
Translates to: KAVEGCPSPHILFVAFNEASWLW*PLCPGA
Trigger: AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGC...CTCATTAAAGGCTACGAACAGGATGTGGGGACTCGGACATCCTTCTACGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp CACCAAGGAGTAGTTGAGCTCCATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCGGTCCCACTCACTCTG +
Preference number: 3 (lower is better)
Translates to: HQGVVELHEAKG*CKVFQAVPLTL
Trigger: CAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCAACTACTCCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp CTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGAATGTTCTCTGTGCGTaGATGCCCTGTGGAATGCTA +
Preference number: 3 (lower is better)
Translates to: LLSSVSGGVGLGLGLCVENVLCA*MPCGML
Trigger: TAGCATTCCACAGGGCATCAACGCACAGAGAACATT...CTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR TCA 72 bp CCTGCCAGAGGCCATCCCTGCATCTTGCCCTCTGGGTaGCAGTGTGTTCACCATGGTTTTCTCTTTTTCTGG +
Preference number: 3 (lower is better)
Translates to: PARGHPCILPSG*QCVHHGFLFFW
Trigger: CCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGCAGGGATGGCCTCTGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR GCA 72 bp TTGTGTGTTGAGGGCATTGTTCTCTGGCACTGGCTCTaGATAGATGGTTGTCCTCCTTGCCCTTGTGGGTGC +
Preference number: 3 (lower is better)
Translates to: LCVEGIVLWHWL*IDGCPPCPCGC
Trigger: GCACCCACAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAGAACAATGCCCTCAACACACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR-3UTR CAA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGA +
Preference number: 3 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALGQFLA*AVPGPG
Trigger: TCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACC...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGA +
Preference number: 3 (lower is better)
Translates to: WKSVFQQELWYWPPITPFGPGQF*ALAVPG
Trigger: TCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCC...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCAGATGGTTGTCCTCCTaGCCCTTGTGGGTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSRWLSS*PLWVPG
Trigger: CCCAGGCACCCACAAGGGCAAGGAGGACAACCATCT...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 72 bp GAAAGAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTaGTCTTCACAGAGTCAGGGCAAGTCGTCTGAAGGC +
Preference number: 3 (lower is better)
Translates to: ERVSGATATWRL*SSQSQGKSSEG
Trigger: GCCTTCAGACGACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR-3UTR CAA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: MAKESQDSHCILCLGAGKELLKG*ELSLSH
Trigger: ATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTC...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: LKGLELSLSHGKWPKSLKGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp TTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGCATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 3 (lower is better)
Translates to: FGSSGTRTLVQPDYPFIVHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...CACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp GAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCAGTTTTTCAGCAGGAATaGTGGTATTGGCCACCCATC +
Preference number: 3 (lower is better)
Translates to: EFLEPQRLGGFDLHRVRAVFQQE*WYWPPI
Trigger: GATGGGTGGCCAATACCACAATTCCTGCTGAAAAAC...TGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 72 bp TGTGCGTTGATGCCCTGTGGAATGCTAAGCAACTGTTaGAAGAAGGGAGTGGACCTGTATGTCCCGACATGG +
Preference number: 3 (lower is better)
Translates to: CALMPCGMLSNC*KKGVDLYVPTW
Trigger: CCATGTCGGGACATACAGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCATTCCACAGGGCATCAACGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
3UTR TCA 72 bp CACGTTCTTGAAACCCCGATTGCCCAATATAAGGAGTaGCTGGGTCAGGGAGAAGGCGGTAAAGCCGTAGAA +
Preference number: 3 (lower is better)
Translates to: HVLETPIAQYKE*LGQGEGGKAVE
Trigger: TTCTACGGCTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGT +
Preference number: 3 (lower is better)
Translates to: LKGLELSLSHGK*PKSLKIPTVSC
Trigger: ACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 3 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCAT +
Preference number: 3 (lower is better)
Translates to: WKSVFQQELWYWPPITPFELLKG*ELSLSH
Trigger: ATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTC...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGCATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 3 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTGCAGGAATTGTGGTATaGGCCACCCATCACCCCATT +
Preference number: 3 (lower is better)
Translates to: PFAILRESCPWFKCSLGTAGIVV*ATHHPI
Trigger: AATGGGGTGATGGGTGGCCAATACCACAATTCCTGC...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp CCGCTTCCAGACTTCTCTCTCCAGCTTGAAGTCATGGTTTATGTAAAAGATCAGGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: PLPDFSLQLEVMVYVKDQGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...CTGATCTTTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp GAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTACATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 3 (lower is better)
Translates to: ELSLSHGKWPKSLKIPTVHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...TACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR TCA 72 bp TGTATTTTTCCTCAAAATCCCACCGAGGCTCAGATTTaGAGTTGGCGGCCTTCAGTCTTTGGTTTCTCTGCG +
Preference number: 3 (lower is better)
Translates to: CIFPQNPTEAQI*SWRPSVFGFSA
Trigger: CGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGGTGGGATTTTGAGGAAAAATACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CCA 72 bp ATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAATGTACTGAAGAACTT +
Preference number: 3 (lower is better)
Translates to: IGHPSPHLIKNP*PQDLQQCTEEL
Trigger: AAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 3 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 3 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR-3UTR CAA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCTGTGTGTTGAGGGCATaGTTCTCTGGCACTGGCTCT +
Preference number: 3 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGCVLRA*FSGTGS
Trigger: AGAGCCAGTGCCAGAGAACAATGCCCTCAACACACA...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR TCA 72 bp AAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTG +
Preference number: 3 (lower is better)
Translates to: KNFRTSISHLPS*ESLVHGSSVPL
Trigger: CAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR-3UTR CAA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACTGTATCAAGAAGCTTTaGGACTGGAAGAGTGTTTTT +
Preference number: 3 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNCIKKL*DWKSVF
Trigger: AAAAACACTCTTCCAGTCCAAAAGCTTCTTGATACA...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR TCA 72 bp GAAGTCATGGTTTATGTAAAAGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATCAGAAAAGCGCTCATG +
Preference number: 3 (lower is better)
Translates to: EVMVYVKDQPLP*CIIVVIRKALM
Trigger: CATGAGCGCTTTTCTGATCACTACTATGATACATCATGGAAGCGGCTGATCTTTTACATAAACCATGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTTGGGGCACCTTGTCCTaGTCCTCCGGCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPWGTLS*SSGGAW
Trigger: CCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR GCA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGCTCCTCCGGCGGTaGCTGGTTGGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPLLLRR*LVGLLS
Trigger: GGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAG...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CAA 72 bp GACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGG +
Preference number: 4 (lower is better)
Translates to: DHGSPGPGQFLA*AVPGPGRWYSR
Trigger: CCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CAA 72 bp CTCTTCCATGCTGCCCTCTGTGCTGTGTGGGGCACCTaGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LFHAALCAVWGT*SCSSGGAWLAS
Trigger: GGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGCAGCATGGAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR GCA 90 bp CACCACGGCACAGGTGATGCACCGGAGGCTCCCAGCGGGGAGGCTGGCCAGGAGCTGTGGTTGCCGCTTTaGCCTGGTGCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: HHGTGDAPEAPSGEAGQELWLPL*PGASLT
Trigger: TGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAG...CTCCTGGCCAGCCTCCCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCGACCACTGGACGCCTTaGCTCAGGTGCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLDHWTP*LRCLHL
Trigger: GAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTC...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTCTGTCTCCGGTGGTGTaGGCCTTGGGCTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: VLCGAPCPAPPAVPGWPPLSPVV*ALGWVC
Trigger: ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAG...AGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGTCCTCCGGCGGTGCCTaGTTGGCCTCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WGTLSCSSGGAWLASFPLSSGGA*LASFPL
Trigger: CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGA...CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR GCA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCCTTGCCCTTGTGGGTaGCTGGGACTTAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLPCPCG*LGLRLC
Trigger: GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGG...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
3UTR CAA 72 bp CAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QGDHGSPGPGQF*ALAVPGPGRWY
Trigger: GTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCGTCTTGGCTGTGGTTaGCGCTTTGCCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPRLGCG*RFALVL
Trigger: AAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACG...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR GCA 90 bp CACCACGGCACAGGTGATGCACCGGAGGCTCCCAGCGGGGAGGCTGGCCAGGAGCTTAGGTGGGATGACTaGTGTGGTCACTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HHGTGDAPEAPSGEAGQELRWDD*CGHSFL
Trigger: CAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAG...CTCCTGGCCAGCCTCCCCGCTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp TGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCAGAAGCAAGGACCACTaGACGCCTTGGCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: CGAPCPAPPAVPGWPPFLRSKDH*TPWLRC
Trigger: GCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCT...GAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGGTGTGGGCCTTGGGCTaGGTTTGTGTGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WGTLSCSSGGAWLASFPLVWALG*VCVLRA
Trigger: TGCCCTCAACACACAAACCCAGCCCAAGGCCCACAC...CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTTCCTCTGTCTCCGGTaGTGTGGGCCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LVGLLSSVSGGVGLGLGLFLCLR*CGPWAG
Trigger: CCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAA...CAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp AAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGCCGGCGGTGCCTGGTTaGCCTCCTTTCCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: KETMAALAPVSSWLWQFRPAVPG*PPFLCL
Trigger: GAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGG...CCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGGCCCTCTGTGCTGTGTaGGGCACCTTGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LVGLLSSVSGGVGLGLGLALCAV*GTLSCS
Trigger: GGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGC...CAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTAGGCCGTCAGCTTCCTaGTCTGGCCCCCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPRPSAS*SGPHFL
Trigger: AAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCT...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp AAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KETMAALAPVSSWLWQFRGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...CCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTATCTTGCCCTCTGGGTaGCAGTGTGTTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: VLCGAPCPAPPAVPGWPPILPSG*QCVHHG
Trigger: ACCATGGTGAACACACTGTCACCCAGAGGGCAAGAT...AGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTTCCTCTGTCTCCGGTaGTGTGGGCCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WPPFLCLRWCGPWAGFVCFLCLR*CGPWAG
Trigger: CCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAA...ACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTAGCGGCCTTCAGTCTTTaGTTTCTCTGCGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVAAFSL*FLCVVG
Trigger: CCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGC...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGCGGTCCCACTCACTCTaGTTGAAGTGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SPGPGQFLALAVPGPGRWRSHSL*LKCLES
Trigger: GGACTCCAGACACTTCAACCAGAGTGAGTGGGACCG...CCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCGTCAGTTCTTGGCTTTaGCAGTTCCGGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: CGAPCPAPPAVPGWPPFLVSSWL*QFRDQD
Trigger: GTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGAC...GAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp CCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGCCCACTCACTCTGGTTaGAGTGTCTGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PRSVLGFGSSGTRTLVQPPTHSG*SVWSPG
Trigger: TCCTGGACTCCAGACACTTCAACCAGAGTGAGTGGG...CGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCCCACCACGGCACAGGTaGTGCACCGGAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGPPRHR*CTGGSQ
Trigger: CTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGG...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGGGTCTGTGCCGTCTaGTTCATAAGCAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DHGSPGPGQFLALAVPGPGVCAV*FISSAS
Trigger: GGAAGCACTGCTTATGAATCAGACGGCACAGACCCC...TGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585633.1
CDS-3UTR GCA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCTCTAGAGGAAGGTTCTaGATGTCCTGGGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLSRGRF*MSWGLD
Trigger: ATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGA...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGAAGAAGCAAGGACCACTaGACGCCTTGGCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PVSSWLWQFRDQDAGTAGRSKDH*TPWLRC
Trigger: GCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCT...TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTCTGTCTCCGGTGGTGTaGGCCTTGGGCTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: VGLLSSVSGGVGLGLGLCLSPVV*ALGWVC
Trigger: ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAG...ACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp CTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGCCGGCGGTGCCTGGTTaGCCTCCTTTCCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: LLSSVSGGVGLGLGLCVEPAVPG*PPFLCL
Trigger: GAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGG...CTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGCCCGGGACCAGGACGCTaGTACAGCCGGATTATCCCT +
Preference number: 4 (lower is better)
Translates to: LSSVSGGVGLGLGLCVEGPGPGR*YSRIIP
Trigger: AGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGG...GCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTCAGGCAAGGAGACCATaGCAGCCCTGGCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTQARRP*QPWPRS
Trigger: TGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTG...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTATCCCGAAAAGCTTCCTaGGGTCTGTGCCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVSRKAS*GLCLPK
Trigger: CTTGGGAAGGCACAGACCCCAGGAAGCTTTTCGGGA...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359088.9
CDS-3UTR TCA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTCCACCACGGCACAGGTaGTGCACCGGAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TAGLSLHRVAASRLLSPAPPRHR*CTGGSQ
Trigger: CTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGG...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: TMAALAPVSSWLWQFRDQAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...CTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTAGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGATGGTTGTCCTCCTTaGCCTTGTGGGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: WLASFPLSPVVWALGWVCDGCPP*PCGCLG
Trigger: TCCCAGGCACCCACAAGGGCAAGGAGGACAACCATC...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR GCA 90 bp CCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGCTCTGGCACTGGCTCTaGATAGATGGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRSVLGFGSSGTRTLVQPLWHWL*IDGCPP
Trigger: AGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAG...CGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCACTCTGGCACTGGCTCTaGATAGATGGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DHGSPGPGQFLALAVPGPLWHWL*IDGCPP
Trigger: AGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAG...TGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCCTGCTCCTCCGGCGGTaGCTGGTTGGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGLLLRR*LVGLLS
Trigger: GGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAG...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTGGGGCACCTTGTCCTaGTCCTCCGGCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSWGTLS*SSGGAW
Trigger: CCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGCTGGCTCTGCATAGATaGTTGTCCTCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PRSVLGFGSSGTRTLVQPLALHR*LSSLPL
Trigger: CAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAG...CGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTGCCCTCTGTGCTGTGTaGGGCACCTTGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTALCAV*GTLSCS
Trigger: GGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGC...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGTCTCTGACACCGTCCTaGAGGCCGTCAGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LLSSVSGGVGLGLGLCVESLTPS*RPSASW
Trigger: CCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA...CTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGTTTCTCTGCGTCGTaGGGCTCTGGAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSSVSGGVGLGLGLCVEGFSAS*GSGKGQ
Trigger: CTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACC...CTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGCGGTCCCACTCACTCTaGTTGAAGTGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LVGLLSSVSGGVGLGLGLRSHSL*LKCLES
Trigger: GGACTCCAGACACTTCAACCAGAGTGAGTGGGACCG...CAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp GGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGCCCCGGTCAGTTCTTaGCTTTGGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: GFGSSGTRTLVQPDYPFIAPVSS*LWQFRD
Trigger: GTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGC...GATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CAA 72 bp CTTTTGGGAATGAGCGTCTTGGCTGTGGTTGCCGCTTaGCCCTGGTGCTTCTCTGACACCGTCCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLGMSVLAVVAA*PWCFSDTVLEA
Trigger: GGCCTCCAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLDQPLP*CIIVVI
Trigger: GATCACTACTATGATACATCATGGAAGCGGCTGATC...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp GCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCTTCCCTTGGAACTCCTaGAGGGCTTGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: ARRPWQPWPRSVLGFGSSFPWNS*RAWSLV
Trigger: GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAA...GGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTTTCTGGGCTCTTCCATaGTGCCCTCTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: WLASFPLSPVVWALGWVCFWALP*CPLCCV
Trigger: CACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAA...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp CCGGGTGCCTTCCAGGAAGTGCAAGTAGCGGACGTCCTTCCCAAGAGGCACGTTCTTGATGTAGGCAGCTaGGAGTCTCACCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PGAFQEVQVADVLPKRHVLDVGS*ESHRSG
Trigger: ACCTGAGCGGTGAGACTCCCAGCTGCCTACATCAAG...AACGTGCCTCTTGGGAAGGACGTCCGCTACTTGCACTTCCTGGAAGGCACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTGACCACTGGACGCCTTaGCTCAGGTGCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTDHWTP*LRCLHL
Trigger: GAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTC...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTATTGTTCTCTGGCACTaGCTCTGCATAGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: VLCGAPCPAPPAVPGWPPIVLWH*LCIDGC
Trigger: ACAACCATCTATGCAGAGCCAGTGCCAGAGAACAAT...AGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCGCAGGAGGGCCCCAGTaGTGGGGCGGTATATCCTCC +
Preference number: 4 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSAGGPQ*WGGISS
Trigger: GGAGGATATACCGCCCCACCACTGGGGCCCTCCTGC...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp GGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGACAGGCAAGGAGACCATaGCAGCCCTGGCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GQRVSRFPLYPVPWSRQGQARRP*QPWPRS
Trigger: TGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTG...TCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGGTTGAAAGAAGGGAGTaGACCTGTATGTCCCGACAT +
Preference number: 4 (lower is better)
Translates to: WGTLSCSSGGAWLASFPLVERRE*TCMSRH
Trigger: ATGTCGGGACATACAGGTCCACTCCCTTCTTTCAAC...CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR TCA 90 bp TGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTGCTGGGTTTGTGTGTTaGGGGCATTGTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: WPPFLCLRWCGPWAGFVCAGFVC*GHCSLA
Trigger: TGCCAGAGAACAATGCCCTCAACACACAAACCCAGC...ACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR TCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTCTGTCTCGTCCTTGTTaGCACTGCTCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTLSRPC*HCSCGS
Trigger: GCTCCCACAGGAGCAGTGTCAACAAGGACGAGACAG...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGCGACTTGGAGGCTTTaGTCTTCACAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GFGSSGTRTLVQPDYPFIATWRL*SSQSQG
Trigger: GCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGC...GATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp CTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGCCTCTGGCACTGGCTCTaGATAGATGGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSVSGGVGLGLGLCVEGLWHWL*IDGCPP
Trigger: AGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAG...GCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGCCTGGCTCTGCATAGATaGTTGTCCTCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: LSSVSGGVGLGLGLCVEGLALHR*LSSLPL
Trigger: CAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAG...GCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCCTGTCTCCGGTGGTGTaGGCCTTGGGCTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGLSPVV*ALGWVC
Trigger: ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAG...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TAGLSLHRVAASRLLSPAGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCAGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: EFLEPQRLGGFDLHRVRAGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...TGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTAGACCATGGCAGCCCTaGCCCCGGTCAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TAGLSLHRVAASRLLSPARPWQP*PRSVLG
Trigger: GCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCT...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCAAGTCAGACCATGGCAGCCCTaGCCCCGGTCAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FWSHSDLEALIFTESGQVRPWQP*PRSVLG
Trigger: GCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCT...GACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CAA 72 bp CCGAGGCTCAGATTTGAAGTTGGCGGCCTTCAGTCTTaGGTTTCTCTGCGTCGTGGGGCTCTGGAAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRLRFEVGGLQS*VSLRRGALERG
Trigger: GCCCCTTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGCTGGGTTTGTGTGTTaGGGGCATTGTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SFPLSPVVWALGWVCVLRAGFVC*GHCSLA
Trigger: TGCCAGAGAACAATGCCCTCAACACACAAACCCAGC...CCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR TCA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTAGTCCAGGAAGAGAGTaGGGTTGGGCAGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: WLASFPLSPVVWALGWVCSPGRE*GWAERV
Trigger: AACTCTTTCTGCCCAACCTCACTCTCTTCCTGGACT...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR GCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCCCTTGCCCTTGTGGGTaGCTGGGACTTAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGPCPCG*LGLRLC
Trigger: GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGG...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTATGGGGCACCTTGTCCTaGTCCTCCGGCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLWGTLS*SSGGAW
Trigger: CCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCCGCTTTGCCCTGGTaGTTCTCTGACACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GTAGLSLHRVAASRLLSPAALPW*FSDTVL
Trigger: CAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGC...TGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGGGGAGTTGTTCAGGATaGCCCCGTTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: ESLVHGSSVPLELLKGLEGSCSG*PRCPPR
Trigger: CCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCC...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGCTGATTCATAAGCAGTaGTTCCAGCCACTCATAGTC +
Preference number: 4 (lower is better)
Translates to: TMAALAPVSSWLWQFRDQLIHKQ*FQPLIV
Trigger: GACTATGAGTGGCTGGAAGCACTGCTTATGAATCAG...CTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGAGGTACCTGTCCATGTaGAGGGCTTCCCGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SFPLSPVVWALGWVCVLRRYLSM*RASRKA
Trigger: AGCTTTTCGGGAAGCCCTGCACATGGACAGGTACCT...CCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp GGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGCCCTTGTGGGTGCCTaGGACTTAGGCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQRVSRFPLYPVPWSRQGALVGA*DLGFAR
Trigger: CCTGGCAAAGCCTAAGTCCCAGGCACCCACAAGGGC...TCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGATTGTTCTCTGGCACTaGCTCTGCATAGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: TMAALAPVSSWLWQFRDQIVLWH*LCIDGC
Trigger: ACAACCATCTATGCAGAGCCAGTGCCAGAGAACAAT...CTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCTTCCTCTGTCTCCGGTaGTGTGGGCCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HGSSVPLELLKGLELSLSFLCLR*CGPWAG
Trigger: CCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAA...GCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCCCTCTGTGCTGTGTaGGGCACCTTGTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQALCAV*GTLSCS
Trigger: GGAGCAGGACAAGGTGCCCCACACAGCACAGAGGGC...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGGAGGGCCCCAGTGGTaGGGCGGTATATCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQGGPQW*GGISSS
Trigger: ACTGGAGGATATACCGCCCCACCACTGGGGCCCTCC...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCAAGTCGCCCCGGTCAGTTCTTaGCTTTGGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: FWSHSDLEALIFTESGQVAPVSS*LWQFRD
Trigger: GTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGC...GACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATCCACCACGGCACAGGTaGTGCACCGGAGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNPPRHR*CTGGSQ
Trigger: CTGGGAGCCTCCGGTGCATCACCTGTGCCGTGGTGG...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTCCTTGCCCTTGTGGGTaGCTGGGACTTAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TAGLSLHRVAASRLLSPAPCPCG*LGLRLC
Trigger: GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGG...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AATGAGAGCTCCGCTCAATCGGAACACGTAGTCGTGACTGTCTATCTCCTGGCCCCTTGCCCTTGTGGGTaGCTGGGACTTAGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: NESSAQSEHVVVTVYLLAPCPCG*LGLRLC
Trigger: GCAAAGCCTAAGTCCCAGGCACCCACAAGGGCAAGG...GGCCAGGAGATAGACAGTCACGACTACGTGTTCCGATTGAGCGGAGCTCTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR GCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCCTGCTCCTCCGGCGGTaGCTGGTTGGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSLLLRR*LVGLLS
Trigger: GGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAG...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTAGGTACCTGTCCATGTaGAGGGCTTCCCGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTRYLSM*RASRKA
Trigger: AGCTTTTCGGGAAGCCCTGCACATGGACAGGTACCT...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp GGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAACCGCTCAGGTTTCCTaGCCAGGAAGTGCACACCCT +
Preference number: 4 (lower is better)
Translates to: GQRVSRFPLYPVPWSRQGTAQVS*PGSAHP
Trigger: AGGGTGTGCACTTCCTGGCCAGGAAACCTGAGCGGT...TCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCACCGCTCAGGTTTCCTaGCCAGGAAGTGCACACCCT +
Preference number: 4 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSTAQVS*PGSAHP
Trigger: AGGGTGTGCACTTCCTGGCCAGGAAACCTGAGCGGT...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCGACCACTGGACGCCTTaGCTCAGGTGCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: HGSSVPLELLKGLELSLSDHWTP*LRCLHL
Trigger: GAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTC...GCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACGACCACTGGACGCCTTaGCTCAGGTGCCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: QRVSRFPLYPVPWSRQGDDHWTP*LRCLHL
Trigger: GAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTC...GTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GCATCTTGCCCTCTGGGTGACAGTGTGTTCACCATGGTTTTCTCTTTTTCTGGGTCCTCCGGCGGTGCCTaGTTGGCCTCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ASCPLGDSVFTMVFSFSGSSGGA*LASFPL
Trigger: CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGA...CCCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACGCAGGAGGGCCCCAGTaGTGGGGCGGTATATCCTCC +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDAGGPQ*WGGISS
Trigger: GGAGGATATACCGCCCCACCACTGGGGCCCTCCTGC...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGCCGGGACCAGGACGCTaGTACAGCCGGATTATCCCT +
Preference number: 4 (lower is better)
Translates to: MAKESQDSHCILCLGAGKPGPGR*YSRIIP
Trigger: AGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGG...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGGCCCCGGTCAGTTCTTaGCTTTGGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LKGLELSLSHGKWPKSLKAPVSS*LWQFRD
Trigger: GTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGC...CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTCAGGAATTGTGGTATTaGCCACCCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: WLASFPLSPVVWALGWVCQELWY*PPITPF
Trigger: AAATGGGGTGATGGGTGGCCAATACCACAATTCCTG...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGCATGTCCTGGGGCCTTaGTGTAGGCAGCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALHVLGP*CRQLGV
Trigger: GACTCCCAGCTGCCTACATCAAGGCCCCAGGACATG...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR TCA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGCTGTCTCGTCCTTGTTaGCACTGCTCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: MAKESQDSHCILCLGAGKLSRPC*HCSCGS
Trigger: GCTCCCACAGGAGCAGTGTCAACAAGGACGAGACAG...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTTTGACATCACCGTCTaGTTCATAAGCAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: WPPFLCLRWCGPWAGFVCFDITV*FISSAS
Trigger: GGAAGCACTGCTTATGAATCAGACGGTGATGTCAAA...ACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGATGCTAAGCAACTGTTaGAAGAAGGGAGTGGACCTG +
Preference number: 4 (lower is better)
Translates to: SFPLSPVVWALGWVCVLRMLSNC*KKGVDL
Trigger: CAGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCAT...CCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR GCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCGCCGCTTTGCCCTGGTaGTTCTCTGACACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSAALPW*FSDTVL
Trigger: CAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGC...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGCGTCTTGGCTGTGGTTaGCGCTTTGCCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: MAKESQDSHCILCLGAGKRLGCG*RFALVL
Trigger: AAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACG...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGAAGAAGCAAGGACCACTaGACGCCTTGGCTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PKSLKIPTVSCALEQARRRSKDH*TPWLRC
Trigger: GCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCT...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGTTCCTCTGTCTCCGGTaGTGTGGGCCTTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGFLCLR*CGPWAG
Trigger: CCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAA...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TGTTCTCTGTGCGTTGATGCCCTGTGGAATGCTAAGCAACTGTTGAAAGAAGGGCCGGCGGTGCCTGGTTaGCCTCCTTTCCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CSLCVDALWNAKQLLKEGPAVPG*PPFLCL
Trigger: GAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGG...CCCTTCTTTCAACAGTTGCTTAGCATTCCACAGGGCATCAACGCACAGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR CCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACTCCTCCGGCGGTGCCTaGTTGGCCTCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDSSGGA*LASFPL
Trigger: CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGA...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGAGGCCGTCAGCTTCCTaGTCTGGCCCCCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: MAKESQDSHCILCLGAGKRPSAS*SGPHFL
Trigger: AAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCT...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGAGGCCGTCAGCTTCCTaGTCTGGCCCCCATTTCCTT +
Preference number: 4 (lower is better)
Translates to: ESLVHGSSVPLELLKGLERPSAS*SGPHFL
Trigger: AAGGAAATGGGGGCCAGACCAGGAAGCTGACGGCCT...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGATCTCTGACACCGTCCTaGAGGCCGTCAGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGSLTPS*RPSASW
Trigger: CCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCTTGACACTGCTCCTGTaGGAGCCAGCATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGLTLLL*EPAFCA
Trigger: AGCACAGAATGCTGGCTCCCACAGGAGCAGTGTCAA...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGTTTCTCTGCGTCGTaGGGCTCTGGAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQGFSAS*GSGKGQ
Trigger: CTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACC...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGGCGGCCTTCAGTCTTTaGTTTCTCTGCGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: ESLVHGSSVPLELLKGLEAAFSL*FLCVVG
Trigger: CCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGC...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGCCGGGACCAGGACGCTaGTACAGCCGGATTATCCCT +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALPGPGR*YSRIIP
Trigger: AGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGG...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAGCCCCGGTCAGTTCTTaGCTTTGGCAGTTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: KWPKSLKIPTVSCALEQAAPVSS*LWQFRD
Trigger: GTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGC...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCAGACCATGGCAGCCCTaGCCCCGGTCAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSRPWQP*PRSVLG
Trigger: GCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCT...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTCTTACAAGGTCAACCTaGAAGGCTTTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: WLASFPLSPVVWALGWVCLTRST*KALFEA
Trigger: AGCCTCAAACAAAGCCTTCCAGGTTGACCTTGTAAG...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR CCA 90 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGTGCGTTGATGCCCTGTaGAATGCTAAGCAACTGTTG +
Preference number: 4 (lower is better)
Translates to: SFPLSPVVWALGWVCVLRCVDAL*NAKQLL
Trigger: CAACAGTTGCTTAGCATTCCACAGGGCATCAACGCA...CCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR TCA 90 bp GTGGGTGCCTGGGACTTAGGCTTTGCCAGGGACTGTAGAGACCTTTCTTTAATGGCGACTTGGAGGCTTTaGTCTTCACAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: VGAWDLGFARDCRDLSLMATWRL*SSQSQG
Trigger: GCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGC...CATTAAAGAAAGGTCTCTACAGTCCCTGGCAAAGCCTAAGTCCCAGGCACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGAGCCCAATATAAGGAGTaGCTGGGTCAGGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PKSLKIPTVSCALEQARRAQYKE*LGQGEG
Trigger: GCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGC...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCATTCCCTTGGAACTCCTaGAGGGCTTGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: SQDSHCILCLGAGKETMAFPWNS*RAWSLV
Trigger: GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAA...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTCCCTTGGAACTCCTaGAGGGCTTGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSFPWNS*RAWSLV
Trigger: GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAA...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGCGTCTTGGCTGTGGTTaGCGCTTTGCCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALRLGCG*RFALVL
Trigger: AAGCACCAGGGCAAAGCGGCAACCACAGCCAAGACG...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTGGGAGTTGTTCAGGATaGCCCCGTTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: PFAILRESCPWFKCSLGTGSCSG*PRCPPR
Trigger: CCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCC...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTCCTCAATTAGCCATTTaGCATCTTGAGAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: VGLLSSVSGGVGLGLGLCPQLAI*HLERVL
Trigger: CAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGG...ACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp TGTTCTCTGTGCGTTGATGCCCTGTGGAATGCTAAGCAACTGTTGAAAGAAGGGGCCCTTGTGGGTGCCTaGGACTTAGGCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: CSLCVDALWNAKQLLKEGALVGA*DLGFAR
Trigger: CCTGGCAAAGCCTAAGTCCCAGGCACCCACAAGGGC...CCCTTCTTTCAACAGTTGCTTAGCATTCCACAGGGCATCAACGCACAGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR CCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTAGCCCTTGTGGGTGCCTaGGACTTAGGCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLALVGA*DLGFAR
Trigger: CCTGGCAAAGCCTAAGTCCCAGGCACCCACAAGGGC...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCGTGTGGGCCTTGGGCTaGGTTTGTGTGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEPWEMAKESQDSHCILCVWALG*VCVLRA
Trigger: TGCCCTCAACACACAAACCCAGCCCAAGGCCCACAC...GCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATCCGGCGGTGCCTGGTTaGCCTCCTTTCCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNPAVPG*PPFLCL
Trigger: GAGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGG...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCGGTTTCTCTGCGTCGTaGGGCTCTGGAAAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSGFSAS*GSGKGQ
Trigger: CTGCCCCTTTCCAGAGCCCCACGACGCAGAGAAACC...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGAATCTCCTGGCCCATGTaGGAGTTGTTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: PKSLKIPTVSCALEQARRISWPM*ELFRMP
Trigger: GGGCATCCTGAACAACTCCCACATGGGCCAGGAGAT...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCACGGTATATCCTCCAGTaGGCACCATCCAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: EFLEPQRLGGFDLHRVRARYILQ*APSRVL
Trigger: TAAGACCCTGGATGGTGCCCACTGGAGGATATACCG...TGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTGCAGGAGGGCCCCAGTaGTGGGGCGGTATATCCTCC +
Preference number: 4 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPAGGPQ*WGGISS
Trigger: GGAGGATATACCGCCCCACCACTGGGGCCCTCCTGC...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGGCAGGAGGGCCCCAGTaGTGGGGCGGTATATCCTCC +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVAGGPQ*WGGISS
Trigger: GGAGGATATACCGCCCCACCACTGGGGCCCTCCTGC...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCCCGGGACCAGGACGCTaGTACAGCCGGATTATCCCT +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSPGPGR*YSRIIP
Trigger: AGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGG...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CAA 72 bp AGGTTGGGCAGAAAGAGTTTCTGGAGCCACAGCGACTaGGAGGCTTTGATCTTCACAGAGTCAGGGCAAGTC +
Preference number: 4 (lower is better)
Translates to: RLGRKSFWSHSD*EALIFTESGQV
Trigger: GACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CAA 72 bp ACGTCCTTCCCAAGAGGCACGTTCTTGAAACCCCGATaGCCCAATATAAGGAGTGACTGGGTCAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TSFPRGTFLKPR*PNIRSDWVREK
Trigger: CTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGGGAAGGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTCATGTCCTGGGGCCTTaGTGTAGGCAGCTGGGAGTC +
Preference number: 4 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIHVLGP*CRQLGV
Trigger: GACTCCCAGCTGCCTACATCAAGGCCCCAGGACATG...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR TCA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCTGGGTTTGTGTGTTaGGGGCATTGTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQAGFVC*GHCSLA
Trigger: TGCCAGAGAACAATGCCCTCAACACACAAACCCAGC...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGAGCCAGCATTCTGTGCTaGCTTTTGGGAATGAGCGTC +
Preference number: 4 (lower is better)
Translates to: PKSLKIPTVSCALEQARRASILC*LLGMSV
Trigger: GACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGC...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCACCGAGGCTCAGATTTaGAGTTGGCGGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSTEAQI*SWRPSV
Trigger: GACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGGT...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGATCAGGGCAAGTCGTCTaGAGGCCTCCTATTTCGAAG +
Preference number: 4 (lower is better)
Translates to: PKSLKIPTVSCALEQARRSGQVV*RPPISK
Trigger: CTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGA...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGCCCACTCACTCTGGTTaGAGTGTCTGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALPTHSG*SVWSPG
Trigger: TCCTGGACTCCAGACACTTCAACCAGAGTGAGTGGG...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTGAAGTCATGGTTTGCCCAATATAAGGAGTaGCTGGGTCAGGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PSSCSRFQTSLSSLKSWFAQYKE*LGQGEG
Trigger: GCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGC...AAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTDQPLP*CIIVVI
Trigger: GATCACTACTATGATACATCATGGAAGCGGCTGATC...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCATCTAGAGGAAGGTTCTaGATGTCCTGGGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SQDSHCILCLGAGKETMASRGRF*MSWGLD
Trigger: ATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGA...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACGATGGTTGTCCTCCTTaGCCTTGTGGGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDDGCPP*PCGCLG
Trigger: TCCCAGGCACCCACAAGGGCAAGGAGGACAACCATC...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCTGCTCCTCCGGCGGTaGCTGGTTGGCCTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TSEPQLAICHLERVLSMVLLLRR*LVGLLS
Trigger: GGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAG...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCGCCATCCCTGCATCTTaGCCTCTGGGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSAIPAS*PLGDSV
Trigger: CACACTGTCACCCAGAGGGCAAGATGCAGGGATGGC...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GCTAAGCAACTGTTGAAAGAAGGGAGTGGACCTGTATGTCCCGACATGGAAAGAGCCATCCCTGCATCTTaGCCTCTGGGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: AKQLLKEGSGPVCPDMERAIPAS*PLGDSV
Trigger: CACACTGTCACCCAGAGGGCAAGATGCAGGGATGGC...TCTTTCCATGTCGGGACATACAGGTCCACTCCCTTCTTTCAACAGTTGCTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR GCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTGCCGCTTTGCCCTGGTaGTTCTCTGACACCGTCCTG +
Preference number: 4 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIAALPW*FSDTVL
Trigger: CAGGACGGTGTCAGAGAAGCACCAGGGCAAAGCGGC...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AAAGCCGTAGAAGGATGTCCGAGTCCCCACATCCTGTTCGTAGCCTTTAATGAGTCCCACTGTATCCTGTaGCTTGGAGCAGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: KAVEGCPSPHILFVAFNESHCIL*LGAGKE
Trigger: CTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGA...CTCATTAAAGGCTACGAACAGGATGTGGGGACTCGGACATCCTTCTACGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCGCCCTTGTGGGTGCCTaGGACTTAGGCTTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLALVGA*DLGFAR
Trigger: CCTGGCAAAGCCTAAGTCCCAGGCACCCACAAGGGC...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCTGGCCCCCATTTCCTTaGGTCGTCTTTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSWPPFP*VVFVSW
Trigger: CCAGGACACAAAGACGACCCAAGGAAATGGGGGCCA...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCTTTCTTCTCCTTAGGTaGGATGACTGCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGFLLLR*DDCCGH
Trigger: GTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAA...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCGCGGCCTTCAGTCTTTaGTTTCTCTGCGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSAAFSL*FLCVVG
Trigger: CCCCACGACGCAGAGAAACCAAAGACTGAAGGCCGC...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGCGGTATATCCTCCAGTaGGCACCATCCAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LKGLELSLSHGKWPKSLKRYILQ*APSRVL
Trigger: TAAGACCCTGGATGGTGCCCACTGGAGGATATACCG...CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGTCAGTTCTTGGCTTTaGCAGTTCCGGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALVSSWL*QFRDQD
Trigger: GTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGAC...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAGGCAAGGAGACCATaGCAGCCCTGGCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: TSEPQLAICHLERVLSMVQARRP*QPWPRS
Trigger: TGACCGGGGCCAGGGCTGCCATGGTCTCCTTGCCTG...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCTTTCAGCAGGAATTGTaGTATTGGCCACCCATCACC +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGFQQEL*YWPPIT
Trigger: GGTGATGGGTGGCCAATACCACAATTCCTGCTGAAA...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCCCCTTGATACCATCCTaGAAGGCTTTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGPLIPS*KALFEA
Trigger: AGCCTCAAACAAAGCCTTCCAGGATGGTATCAAGGG...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGTCCCGAAAAGCTTCCTaGGGTCTGTGCCGTCTGATT +
Preference number: 4 (lower is better)
Translates to: MAKESQDSHCILCLGAGKSRKAS*GLCRLI
Trigger: AATCAGACGGCACAGACCCCAGGAAGCTTTTCGGGA...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585633.1
CDS-3UTR TCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCTGGGTTTGTGTGTTaGGGGCATTGTTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGAGFVC*GHCSLA
Trigger: TGCCAGAGAACAATGCCCTCAACACACAAACCCAGC...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTGAAGTCATGGTTTATCTTGCCCTCTGGGTaGCAGTGTGTTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: PSSCSRFQTSLSSLKSWFILPSG*QCVHHG
Trigger: ACCATGGTGAACACACTGTCACCCAGAGGGCAAGAT...AAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAATCTTGCCCTCTGGGTaGCAGTGTGTTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQILPSG*QCVHHG
Trigger: ACCATGGTGAACACACTGTCACCCAGAGGGCAAGAT...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCCTGTCTCGTCCTTGTTaGCACTGCTCCTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLLSRPC*HCSCGS
Trigger: GCTCCCACAGGAGCAGTGTCAACAAGGACGAGACAG...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTAACCGAGGCTCAGATTTaGAGTTGGCGGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ELSLSHGKWPKSLKIPTVTEAQI*SWRPSV
Trigger: GACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGGT...TACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGACCGAGGCTCAGATTTaGAGTTGGCGGCCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGTEAQI*SWRPSV
Trigger: GACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGGT...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGTCAGGGCAAGTCGTCTaGAGGCCTCCTATTTCGAAG +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALSGQVV*RPPISK
Trigger: CTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGA...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTAGCGACTTGGAGGCTTTaGTCTTCACAGAGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLATWRL*SSQSQG
Trigger: GCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGC...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACAGTCCAGGAAGAGAGTaGGGTTGGGCAGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QRVSRFPLYPVPWSRQGDSPGRE*GWAERV
Trigger: AACTCTTTCTGCCCAACCTCACTCTCTTCCTGGACT...GTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: TAGLSLHRVAASRLLSPASHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTCCTACAGCAATGTACTaGAGAACTTCAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTPTAMY*RTSEPQ
Trigger: TTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGG...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTGCCATCCCTGCATCTTaGCCTCTGGGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIAIPAS*PLGDSV
Trigger: CACACTGTCACCCAGAGGGCAAGATGCAGGGATGGC...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTACTGTGGTTGCCGCTTTaGCCTGGTGCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: ELSLSHGKWPKSLKIPTVLWLPL*PGASLT
Trigger: TGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAG...TACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAAGGGAGTTGTTCAGGATaGCCCCGTTGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEEGSCSG*PRCPPR
Trigger: CCGTGGTGGGCAACGGGGGCATCCTGAACAACTCCC...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGACTCATAGTCCCGGGTaGCTTCCAGGAAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALTHSPG*LPGSAS
Trigger: ACTTGCACTTCCTGGAAGGCACCCGGGACTATGAGT...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTAAGGTTCTGCATGTCCTaGGGCCTTGATGTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLRFCMS*GLDVGS
Trigger: GCTGCCTACATCAAGGCCCCAGGACATGCAGAACCT...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCTGTCTCCGGTGGTGTaGGCCTTGGGCTGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPLSPVV*ALGWVC
Trigger: ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAG...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTTCCTCCGGCGGTGCCTaGTTGGCCTCCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TSEPQLAICHLERVLSMVSSGGA*LASFPL
Trigger: CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGA...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGTGGCCCCCATTTCCTTaGGTCGTCTTTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGWPPFP*VVFVSW
Trigger: CCAGGACACAAAGACGACCCAAGGAAATGGGGGCCA...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATCATAGTAGTGATCAGAAAAGCGCTCATGGCCCTCAGTGATGAAGCCATAAGCGTTGCCGCTTTGCCCTaGTGCTTCTCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: IIVVIRKALMALSDEAISVAALP*CFSDTV
Trigger: GACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAAC...GCTTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGATTGACACTGCTCCTGTaGGAGCCAGCATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGLTLLL*EPAFCA
Trigger: AGCACAGAATGCTGGCTCCCACAGGAGCAGTGTCAA...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTTCTTCTCCTTAGGTaGGATGACTGCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSFLLLR*DDCCGH
Trigger: GTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAA...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCCGGTCCCACTCACTCTaGTTGAAGTGTCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSRSHSL*LKCLES
Trigger: GGACTCCAGACACTTCAACCAGAGTGAGTGGGACCG...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGACATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGHEAKG*CKVFQA
Trigger: CGCCTGGAACACTTTGCACCACCCTTTGGCTTCATG...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SEPWEMAKESQDSHCILCHEAKG*CKVFQA
Trigger: CGCCTGGAACACTTTGCACCACCCTTTGGCTTCATG...GCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCAAATATAAGGAGTGACTaGGTCAGGGAGAAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SQDSHCILCLGAGKETMANIRSD*VREKAV
Trigger: TACCGCCTTCTCCCTGACCCAGTCACTCCTTATATT...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGTCAGAAAAGCGCTCATaGCCCTCAGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQSEKRS*PSVMKP
Trigger: TGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGA...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGTCAGAAAAGCGCTCATaGCCCTCAGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LKGLELSLSHGKWPKSLKSEKRS*PSVMKP
Trigger: TGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGA...CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATAGACCATGGCAGCCCTaGCCCCGGTCAGTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: KSVFQQELWYWPPITPFNRPWQP*PRSVLG
Trigger: GCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCT...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGCTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALLYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCCTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSLYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGAAGGGGCAGGAACAATaGCTGTTTCAGCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: MAKESQDSHCILCLGAGKKGQEQ*LFQQLL
Trigger: GAGTAGCTGCTGAAACAGCCATTGTTCCTGCCCCTT...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
3UTR CAA 72 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HGSSVPLELLKG*ELSLSHGKWPK
Trigger: CTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
3UTR CAA 72 bp CTGTGCGTTGATGCCCTGTGGAATGCTAAGCAACTGTaGAAAGAAGGGAGTGGACCTGTATGTCCCGACATG +
Preference number: 4 (lower is better)
Translates to: LCVDALWNAKQL*KEGSGPVCPDM
Trigger: CATGTCGGGACATACAGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCATTCCACAGGGCATCAACGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS-3UTR TCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGACAAGAGGCACGTTCTTaGAACCCCGATTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGQEARS*NPDCPI
Trigger: TATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTG...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCACAAGAGGCACGTTCTTaGAACCCCGATTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: KWPKSLKIPTVSCALEQAQEARS*NPDCPI
Trigger: TATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTG...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTAGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCATCTAGAGGAAGGTTCTaGATGTCCTGGGGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KWPKSLKIPTVSCALEQASRGRF*MSWGLD
Trigger: ATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGA...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTGATGGTTGTCCTCCTTaGCCTTGTGGGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPDGCPP*PCGCLG
Trigger: TCCCAGGCACCCACAAGGGCAAGGAGGACAACCATC...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTTCTGGGCTCTTCCATaGTGCCCTCTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIFWALP*CPLCCV
Trigger: CACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAA...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCTGTGGTTGCCGCTTTaGCCTGGTGCTTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: PFAILRESCPWFKCSLGTLWLPL*PGASLT
Trigger: TGTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAG...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGTCTTTGGTTTCTCTaGGTCGTGGGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: KWPKSLKIPTVSCALEQASLWFL*VVGLWK
Trigger: TTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACT...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGCTTCCTGGGGTCTGTaGCTGAACCAGAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALASWGL*LNQKRF
Trigger: AAACCTTTTCTGGTTCAGGCACAGACCCCAGGAAGC...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR GCA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGAGGTACCTGTCCATGTaGAGGGCTTCCCGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGRYLSM*RASRKA
Trigger: AGCTTTTCGGGAAGCCCTGCACATGGACAGGTACCT...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCAAGTCATTGTTCTCTGGCACTaGCTCTGCATAGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: FWSHSDLEALIFTESGQVIVLWH*LCIDGC
Trigger: ACAACCATCTATGCAGAGCCAGTGCCAGAGAACAAT...GACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CCA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTGTGTGGGCCTTGGGCTaGGTTTGTGTGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPVWALG*VCVLRA
Trigger: TGCCCTCAACACACAAACCCAGCCCAAGGCCCACAC...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTCTCTGACACCGTCCTaGAGGCCGTCAGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KSVFQQELWYWPPITPFNSLTPS*RPSASW
Trigger: CCAGGAAGCTGACGGCCTCCAGGACGGTGTCAGAGA...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGGTTGCCGCTTTGCCCTaGTGCTTCTCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVVAALP*CFSDTV
Trigger: GACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAAC...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTATTGACACTGCTCCTGTaGGAGCCAGCATTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLLTLLL*EPAFCA
Trigger: AGCACAGAATGCTGGCTCCCACAGGAGCAGTGTCAA...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTTCCCGAAAAGCTTCCTaGGGTCTGTGCCTGAACCAG +
Preference number: 4 (lower is better)
Translates to: PFAILRESCPWFKCSLGTSRKAS*GLCLNQ
Trigger: CTGGTTCAGGCACAGACCCCAGGAAGCTTTTCGGGA...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCCGGTATATCCTCCAGTaGGCACCATCCAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSRYILQ*APSRVL
Trigger: TAAGACCCTGGATGGTGCCCACTGGAGGATATACCG...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCTCAGAAAAGCGCTCATaGCCCTCAGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSSEKRS*PSVMKP
Trigger: TGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGA...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGTTTCAGCAGGAATTGTaGTATTGGCCACCCATCACC +
Preference number: 4 (lower is better)
Translates to: ESLVHGSSVPLELLKGLEFQQEL*YWPPIT
Trigger: GGTGATGGGTGGCCAATACCACAATTCCTGCTGAAA...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
3UTR CAA 72 bp TTTTCCTCAAAATCCCACCGAGGCTCAGATTTGAAGTaGGCGGCCTTCAGTCTTTGGTTTCTCTGCGTCGTG +
Preference number: 4 (lower is better)
Translates to: FSSKSHRGSDLK*AAFSLWFLCVV
Trigger: CACGACGCAGAGAAACCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCCTCGGTGGGATTTTGAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR TCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCGCCAGCATTCTGTGCTaGCTTTTGGGAATGAGCGTC +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLASILC*LLGMSV
Trigger: GACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGC...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTTGAAGTCATGGTTTAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: PSSCSRFQTSLSSLKSWFSHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...AAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCTTCCTGGCCAGGAAGTaGACACCCTTTGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSFLARK*TPFVLT
Trigger: TGTTAAGACAAAGGGTGTGCACTTCCTGGCCAGGAA...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR GCA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTCTCTGGCACTGGCTCTaGATAGATGGTTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: WKSVFQQELWYWPPITPFLWHWL*IDGCPP
Trigger: AGGAGGACAACCATCTATGCAGAGCCAGTGCCAGAG...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATTGGGGCACCTTGTCCTaGTCCTCCGGCGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYWGTLS*SSGGAW
Trigger: CCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCTGGGCTCTTCCATaGTGCCCTCTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVFWALP*CPLCCV
Trigger: CACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAA...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTTAGGTGGGATGACTaGTGTGGTCACTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDLRWDD*CGHSFL
Trigger: CAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAG...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGAGTCTTTGGTTTCTCTaGGTCGTGGGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGSLWFL*VVGLWK
Trigger: TTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACT...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTAAGTCTTTGGTTTCTCTaGGTCGTGGGGCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLSLWFL*VVGLWK
Trigger: TTTCCAGAGCCCCACGACGCAGAGAAACCAAAGACT...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACGCTTCCTGGGGTCTGTaGCTGAACCAGAAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDASWGL*LNQKRF
Trigger: AAACCTTTTCTGGTTCAGGCACAGACCCCAGGAAGC...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR GCA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTTCCCACTGTATCCTGTaGCTTGGAGCAGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTSHCIL*LGAGKE
Trigger: CTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGA...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTACTGTGCGTTGATGCCTaGAAGGCTTTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ELSLSHGKWPKSLKIPTVLCVDA*KALFEA
Trigger: AGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAG...TACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000359088.9
CDS-3UTR CCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTGTGTGGGCCTTGGGCTaGGTTTGTGTGTTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TSEPQLAICHLERVLSMVVWALG*VCVLRA
Trigger: TGCCCTCAACACACAAACCCAGCCCAAGGCCCACAC...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATGTTGCCGCTTTGCCCTaGTGCTTCTCTGACACCGTC +
Preference number: 4 (lower is better)
Translates to: KSVFQQELWYWPPITPFNVAALP*CFSDTV
Trigger: GACGGTGTCAGAGAAGCACCAGGGCAAAGCGGCAAC...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTATCTCCTGGCCCATGTaGGAGTTGTTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTISWPM*ELFRMP
Trigger: GGGCATCCTGAACAACTCCCACATGGGCCAGGAGAT...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATCTGTATCCTGTGCCTTaGAGCAGGCAAGGAGACCAT +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNLYPVP*SRQGDH
Trigger: ATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAG...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: ESLVHGSSVPLELLKGLELSHGK*PKSLKI
Trigger: AATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAG...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: QRVSRFPLYPVPWSRQGDRESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...GTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGATTTCAGCAGGAATTGTaGTATTGGCCACCCATCACC +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGFQQEL*YWPPIT
Trigger: GGTGATGGGTGGCCAATACCACAATTCCTGCTGAAA...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp GTGGGTGCCTGGGACTTAGGCTTTGCCAGGGACTGTAGAGACCTTTCTTTAATGCTGGAAGGCTTTGTTTaGGGCTCCTTAATAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VGAWDLGFARDCRDLSLMLEGFV*GSLIKE
Trigger: CTCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAG...CATTAAAGAAAGGTCTCTACAGTCCCTGGCAAAGCCTAAGTCCCAGGCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR TCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGGCCAGCATTCTGTGCTaGCTTTTGGGAATGAGCGTC +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVASILC*LLGMSV
Trigger: GACGCTCATTCCCAAAAGTCAGCACAGAATGCTGGC...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACCCACTCACTCTGGTTaGAGTGTCTGGAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEEPTHSG*SVWSPG
Trigger: TCCTGGACTCCAGACACTTCAACCAGAGTGAGTGGG...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTTTCCCTTGGAACTCCTaGAGGGCTTGGAGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTFPWNS*RAWSLV
Trigger: GACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAA...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDSHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACTTCTGGGCTCTTCCATaGTGCCCTCTGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNFWALP*CPLCCV
Trigger: CACACAGCACAGAGGGCAGCATGGAAGAGCCCAGAA...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTGCCATCCCTGCATCTTaGCCTCTGGGTGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSAIPAS*PLGDSV
Trigger: CACACTGTCACCCAGAGGGCAAGATGCAGGGATGGC...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTCTTAGGTGGGATGACTaGTGTGGTCACTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: WKSVFQQELWYWPPITPFLRWDD*CGHSFL
Trigger: CAGAAAGGAGTGACCACAGCAGTCATCCCACCTAAG...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGAGGTACCTGTCCATGTaGAGGGCTTCCCGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVRYLSM*RASRKA
Trigger: AGCTTTTCGGGAAGCCCTGCACATGGACAGGTACCT...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCCTCAATTAGCCATTTaGCATCTTGAGAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ESLVHGSSVPLELLKGLEPQLAI*HLERVL
Trigger: CAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGG...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCCCTCAATTAGCCATTTaGCATCTTGAGAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: HGSSVPLELLKGLELSLSPQLAI*HLERVL
Trigger: CAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGG...GCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTGATGTAGGCAGCTaGGAGTCTCACCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEELDVGS*ESHRSG
Trigger: ACCTGAGCGGTGAGACTCCCAGCTGCCTACATCAAG...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTCTGGCTCTGCATAGATaGTTGTCCTCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTLALHR*LSSLPL
Trigger: CAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAG...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGCTGGCTCTGCATAGATaGTTGTCCTCCTTGCCCTTG +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVLALHR*LSSLPL
Trigger: CAAGGGCAAGGAGGACAACCATCTATGCAGAGCCAG...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp GAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGCGGTATATCCTCCAGTaGGCACCATCCAGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: EPQLAICHLERVLSMVQVRYILQ*APSRVL
Trigger: TAAGACCCTGGATGGTGCCCACTGGAGGATATACCG...CACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAAGTCAGTTCTTGGCTTTaGCAGTTCCGGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEEVSSWL*QFRDQD
Trigger: GTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGAC...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGACTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: PWEMAKESQDSHCILCLGLSHGK*PKSLKI
Trigger: AATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAG...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCCTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSLSHGK*PKSLKI
Trigger: AATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAG...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: KWPKSLKIPTVSCALEQARESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQRESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTATCTTGCCCTCTGGGTaGCAGTGTGTTCACCATGGT +
Preference number: 4 (lower is better)
Translates to: TSEPQLAICHLERVLSMVILPSG*QCVHHG
Trigger: ACCATGGTGAACACACTGTCACCCAGAGGGCAAGAT...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCCTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAA +
Preference number: 4 (lower is better)
Translates to: HGSSVPLELLKGLELSLSLLSPA*SHGLCK
Trigger: TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAG...GCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCACCTACAGCAATGTACTaGAGAACTTCAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: KWPKSLKIPTVSCALEQAPTAMY*RTSEPQ
Trigger: TTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGG...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATACTCATAGTCCCGGGTaGCTTCCAGGAAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: KSVFQQELWYWPPITPFNTHSPG*LPGSAS
Trigger: ACTTGCACTTCCTGGAAGGCACCCGGGACTATGAGT...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTTCTTCTCCTTAGGTaGGATGACTGCTGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNFLLLR*DDCCGH
Trigger: GTGACCACAGCAGTCATCCCACCTAAGGAGAAGAAA...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATATAAGGAGTGACTaGGTCAGGGAGAAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLNIRSD*VREKAV
Trigger: TACCGCCTTCTCCCTGACCCAGTCACTCCTTATATT...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTGTCAGTTCTTGGCTTTaGCAGTTCCGGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSVSSWL*QFRDQD
Trigger: GTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGAC...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCCTGAGCCATGGGAAATaGCCAAAGAGTCTCAAGATT +
Preference number: 4 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSLSHGK*PKSLKI
Trigger: AATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAG...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTCAGGAATTGTGGTATTaGCCACCCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: WKSVFQQELWYWPPITPFQELWY*PPITPF
Trigger: AAATGGGGTGATGGGTGGCCAATACCACAATTCCTG...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTGGAAGGCTTTGTTTaGGGCTCCTTAATAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDLEGFV*GSLIKE
Trigger: CTCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAG...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTTCAGGGCAAGTCGTCTaGAGGCCTCCTATTTCGAAG +
Preference number: 4 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSSGQVV*RPPISK
Trigger: CTTCGAAATAGGAGGCCTTCAGACGACTTGCCCTGA...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTTTGACATCACCGTCTaGTTCATAAGCAGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIFDITV*FISSAS
Trigger: GGAAGCACTGCTTATGAATCAGACGGTGATGTCAAA...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR TCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLDQPLP*CIIVVI
Trigger: GATCACTACTATGATACATCATGGAAGCGGCTGATC...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ATAGTAGTGATCAGAAAAGCGCTCATGGCCCTCAGTGATGAAGCCATAAGCACTGATCAGCCGCTTCCATaGTGTATCATAGTAGTGATC +
Preference number: 4 (lower is better)
Translates to: IVVIRKALMALSDEAISTDQPLP*CIIVVI
Trigger: GATCACTACTATGATACATCATGGAAGCGGCTGATC...AGTGCTTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR GCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATCTGATTCATAAGCAGTaGTTCCAGCCACTCATAGTC +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNLIHKQ*FQPLIV
Trigger: GACTATGAGTGGCTGGAAGCACTGCTTATGAATCAG...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR GCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCCTGATTCATAAGCAGTaGTTCCAGCCACTCATAGTC +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLLIHKQ*FQPLIV
Trigger: GACTATGAGTGGCTGGAAGCACTGCTTATGAATCAG...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTATTGTTCTCTGGCACTaGCTCTGCATAGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: WKSVFQQELWYWPPITPFIVLWH*LCIDGC
Trigger: ACAACCATCTATGCAGAGCCAGTGCCAGAGAACAAT...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTCATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCG +
Preference number: 4 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSHEAKG*CKVFQA
Trigger: CGCCTGGAACACTTTGCACCACCCTTTGGCTTCATG...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACTTCAGAACCTCAATTAGCCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTTCAGAAAAGCGCTCATaGCCCTCAGTGATGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TSEPQLAICHLERVLSMVSEKRS*PSVMKP
Trigger: TGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGA...AACCATGGACAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGGTTCTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CCA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAATTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQLIKNP*PQDLQQ
Trigger: TTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAA...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp CCGCTTCCAGACTTCTCTCTCCAGCTTGAAGTCATGGTTTATGTAAAAGATCAGCAGGAATTGTGGTATTaGCCACCCATCACCCCATTT +
Preference number: 4 (lower is better)
Translates to: PLPDFSLQLEVMVYVKDQQELWY*PPITPF
Trigger: AAATGGGGTGATGGGTGGCCAATACCACAATTCCTG...CTGATCTTTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATCTGGAAGGCTTTGTTTaGGGCTCCTTAATAAAAGAG +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNLEGFV*GSLIKE
Trigger: CTCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAG...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCGCCCAATATAAGGAGTaGCTGGGTCAGGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGAQYKE*LGQGEG
Trigger: GCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGC...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTCAAGAGGCACGTTCTTaGAACCCCGATTGCCCAATA +
Preference number: 4 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSQEARS*NPDCPI
Trigger: TATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTG...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACAGCCATTTGCCATCTTaGGAGAGTCTTGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNSHLPS*ESLVHG
Trigger: ACCATGGACAAGACTCTCTCAAGATGGCAAATGGCT...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCCCTACAGCAATGTACTaGAGAACTTCAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLPTAMY*RTSEPQ
Trigger: TTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGG...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATGATGGTTGTCCTCCTTaGCCTTGTGGGTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYDGCPP*PCGCLG
Trigger: TCCCAGGCACCCACAAGGGCAAGGAGGACAACCATC...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTCTGTGCGTTGATGCCTaGAAGGCTTTGTTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSLCVDA*KALFEA
Trigger: AGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAG...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000359088.9
CDS-3UTR CCA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACAATATAAGGAGTGACTaGGTCAGGGAGAAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNNIRSD*VREKAV
Trigger: TACCGCCTTCTCCCTGACCCAGTCACTCCTTATATT...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAA +
Preference number: 4 (lower is better)
Translates to: PFAILRESCPWFKCSLGTLLSPA*SHGLCK
Trigger: TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAG...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR TCA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCGCTTGGAGCTTAGTCTaGGCCATGGGAAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGAWSLV*AMGNGQ
Trigger: TTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGC...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATTGGCCCCCATTTCCTTaGGTCGTCTTTGTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYWPPFP*VVFVSW
Trigger: CCAGGACACAAAGACGACCCAAGGAAATGGGGGCCA...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATATCTCCTGGCCCATGTaGGAGTTGTTCAGGATGCCC +
Preference number: 4 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYISWPM*ELFRMP
Trigger: GGGCATCCTGAACAACTCCCACATGGGCCAGGAGAT...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACAGAGAGTCTTGTCCATaGTTCAAGTGTTCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNRESCP*FKCSLG
Trigger: TCCAAGGGAACACTTGAACCATGGACAAGACTCTCT...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CCA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNLIKNP*PQDLQQ
Trigger: TTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAA...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAA +
Preference number: 4 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPLLSPA*SHGLCK
Trigger: TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAG...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATACTCATAGTCCCGGGTaGCTTCCAGGAAGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYTHSPG*LPGSAS
Trigger: ACTTGCACTTCCTGGAAGGCACCCGGGACTATGAGT...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR GCA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCCTCAATTAGCCATTTaGCATCTTGAGAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNPQLAI*HLERVL
Trigger: CAAGACTCTCTCAAGATGGCAAATGGCTAATTGAGG...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATAGTCCAGGAAGAGAGTaGGGTTGGGCAGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYSPGRE*GWAERV
Trigger: AACTCTTTCTGCCCAACCTCACTCTCTTCCTGGACT...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR GCA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCTTCCTGGCCAGGAAGTaGACACCCTTTGTCTTAACA +
Preference number: 4 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGFLARK*TPFVLT
Trigger: TGTTAAGACAAAGGGTGTGCACTTCCTGGCCAGGAA...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CCA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTTAATTAAAAATCCCTaGCCTCAGGACCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: KSVFQQELWYWPPITPFNLIKNP*PQDLQQ
Trigger: TTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAA...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR TCA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCCTTCTCTCTCCAGCTTaGAGTCATGGTTTATGTAAA +
Preference number: 4 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGLLSPA*SHGLCK
Trigger: TTTACATAAACCATGACTTCAAGCTGGAGAGAGAAG...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCGGACCACTGGACGCCTaGGCTCAGGTGCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLGPLDA*AQVPAS
Trigger: AGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCC...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCAGATGGTTGTCCTCCTaGCCCTTGTGGGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLRWLSS*PLWVPG
Trigger: CCCAGGCACCCACAAGGGCAAGGAGGACAACCATCT...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTTCCGGCGGTGCCTGGTaGGCCTCCTTTCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPSGGAW*ASFPLS
Trigger: AGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGA...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp TGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTGCTGTGTGGGGCACCTaGTCCTGCTCCTCCGGCGGT +
Preference number: 5 (lower is better)
Translates to: WPPFLCLRWCGPWAGFVCAVWGT*SCSSGG
Trigger: ACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGC...ACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp AGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGGCTGTGGTTGCCGCTTaGCCCTGGTGCTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SPGPGQFLALAVPGPGRWAVVAA*PWCFSD
Trigger: GTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGC...CCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGGGCGGCCTTCAGTCTTaGGTTTCTCTGCGTCGTGGG +
Preference number: 5 (lower is better)
Translates to: SPGPGQFLALAVPGPGRWGGLQS*VSLRRG
Trigger: CCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCC...CCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CTGTGCTGTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCGGCCTTGGGCTGGGTTaGTGTGTTGAGGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: LCCVGHLVLLLRRCLVGLGLGLG*CVEGIV
Trigger: AACAATGCCCTCAACACACAAACCCAGCCCAAGGCC...GAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS GCA 90 bp ACCAGGACAGCCAGAAGCAAGGACCACTGGACGCCTTGGCTCAGGTaGCTGCATCTCCACAGGCAGGACCTCATGGTGGTGGGTCGGGTT +
Preference number: 5 (lower is better)
Translates to: TRTARSKDHWTPWLR*LHLHRQDLMVVGRV
Trigger: AACCCGACCCACCACCATGAGGTCCTGCCTGTGGAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000589813.5
ENST00000589992.1
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCGGCCTTGGGCTGGGTTaGTGTGTTGAGGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: CGAPCPAPPAVPGWPPFLGLGLG*CVEGIV
Trigger: AACAATGCCCTCAACACACAAACCCAGCCCAAGGCC...GAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp TGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTCTGTCCCACTCACTCTGGTaGAAGTGTCTGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: WGTLSCSSGGAWLASFPLSHSLW*KCLESR
Trigger: CCTGGACTCCAGACACTTCAACCAGAGTGAGTGGGA...CAGAGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS GCA 90 bp CAGGCAGGACCTCATGGTGGTGGGTCGGGTTCTAGAGGAAGGTTCTaGATGTCCTGGGGCCTTGATGTAGGCAGCTGGGAGTCTCACCGC +
Preference number: 5 (lower is better)
Translates to: QAGPHGGGSGSRGRF*MSWGLDVGSWESHR
Trigger: GCGGTGAGACTCCCAGCTGCCTACATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACCACCATGAGGTCCTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS GCA 90 bp AGCAGCTGCTGCTGGGGCACTGGAGGGAAGCGTGTCACGACCTTCTaGACCACTGGAACAAGAGTGGGGGTGCTCCATTCAGAGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SSCCWGTGGKRVTTF*TTGTRVGVLHSEPG
Trigger: TCCTGGCTCTGAATGGAGCACCCCCACTCTTGTTCCAGTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCAGCAGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590878.1
CDS-3UTR CAA 90 bp CCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTATCTGTCTCGTCCTTGTaGACACTGCTCCTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: PWPRSVLGFGSSGTRTLVSVSSL*TLLLWE
Trigger: CTCCCACAGGAGCAGTGTCAACAAGGACGAGACAGA...TACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: GFGSSGTRTLVQPDYPFIGPGQF*ALAVPG
Trigger: TCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCC...GATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTGCAGGAATTGTGGTATaGGCCACCCATCACCCCATT +
Preference number: 5 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPAGIVV*ATHHPI
Trigger: AATGGGGTGATGGGTGGCCAATACCACAATTCCTGC...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS GCA 90 bp GCAGGTCCCTGGATACGCACGCATAACTGCATGCACCCATACTCATaGCCACCCTCTTTCCCAGCAGATGTGGGCACCCAGCCCATGCAC +
Preference number: 5 (lower is better)
Translates to: AGPWIRTHNCMHPYS*PPSFPADVGTQPMH
Trigger: GTGCATGGGCTGGGTGCCCACATCTGCTGGGAAAGAGGGTGGGCATGAGTATGGGTGCATGCAGTTATGCGTGCGTATCCAGGGACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588375.1
CDS-3UTR CAA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCAGCTGTGTGGGGCACCTaGTCCTGCTCCTCCGGCGGT +
Preference number: 5 (lower is better)
Translates to: SQDSHCILCLGAGKETMAAVWGT*SCSSGG
Trigger: ACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGC...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTGGGAATGAGCGTCTaGGCTGTGGTTGCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: PVSSWLWQFRDQDAGTAGLGMSV*AVVAAL
Trigger: CAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAA...TCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGGCGGCCTTCAGTCTTaGGTTTCTCTGCGTCGTGGG +
Preference number: 5 (lower is better)
Translates to: GFGSSGTRTLVQPDYPFIGGLQS*VSLRRG
Trigger: CCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCC...GATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GCAAGGAGACCATGGCAGCCCTGGCCCCGGTCAGTTCTTGGCTTTGGCAGTTCCACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: ARRPWQPWPRSVLGFGSSTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...GGAACTGCCAAAGCCAAGAACTGACCGGGGCCAGGGCTGCCATGGTCTCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS CCA 90 bp CCTCATGGTGGTGGGTCGGGTTCTAGAGGAAGGTTCTGCATGTCCTaGGGCCTTGATGTAGGCAGCTGGGAGTCTCACCGCTCAGGTTTC +
Preference number: 5 (lower is better)
Translates to: PHGGGSGSRGRFCMS*GLDVGSWESHRSGF
Trigger: GAAACCTGAGCGGTGAGACTCCCAGCTGCCTACATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACCACCATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS CCA 90 bp AGAAAGAAGACCAGGACAGCCAGAAGCAAGGACCACTGGACGCCTTaGCTCAGGTGCCTGCATCTCCACAGGCAGGACCTCATGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RKKTRTARSKDHWTP*LRCLHLHRQDLMVV
Trigger: CACCACCATGAGGTCCTGCCTGTGGAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000589813.5
ENST00000589992.1
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS-3UTR CAA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTAGATGGTTGTCCTCCTaGCCCTTGTGGGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTRWLSS*PLWVPG
Trigger: CCCAGGCACCCACAAGGGCAAGGAGGACAACCATCT...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGCGCTCTGCATAGATGGTaGTCCTCCTTGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: LSSVSGGVGLGLGLCVEGALHRW*SSLPLW
Trigger: CCACAAGGGCAAGGAGGACAACCATCTATGCAGAGC...GCCCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp GTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGGCTGGGTTTGTGTGTaGAGGGCATTGTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: VGLLSSVSGGVGLGLGLCGWVCV*RALFSG
Trigger: GCCAGAGAACAATGCCCTCAACACACAAACCCAGCC...ACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp TTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGGCTGTGGTTGCCGCTTaGCCCTGGTGCTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: FGSSGTRTLVQPDYPFIVAVVAA*PWCFSD
Trigger: GTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGC...CACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTGGCCCATGTGGGAGTaGTTCAGGATGCCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTWPMWE*FRMPPL
Trigger: CAACGGGGGCATCCTGAACAACTCCCACATGGGCCA...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGGACCACTGGACGCCTaGGCTCAGGTGCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GQRVSRFPLYPVPWSRQGGPLDA*AQVPAS
Trigger: AGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCC...TCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GTGTGGGGCACCTTGTCCTGCTCCTCCGGCGGTGCCTGGTTGGCCTCCTTTCCTTTCTTGAAACCCCGATaGCCCAATATAAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: VWGTLSCSSGGAWLASFPFLKPR*PNIRSD
Trigger: GTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAA...AGGAAAGGAGGCCAACCAGGCACCGCCGGAGGAGCAGGACAAGGTGCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp CCCCGGTCAGTTCTTGGCTTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGTTTTTCAGCAGGAATaGTGGTATTGGCCACCCATC +
Preference number: 5 (lower is better)
Translates to: PRSVLGFGSSGTRTLVQPVFQQE*WYWPPI
Trigger: GATGGGTGGCCAATACCACAATTCCTGCTGAAAAAC...CGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGGACCACTGGACGCCTaGGCTCAGGTGCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQGPLDA*AQVPAS
Trigger: AGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCC...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGGGCTGGGTTTGTGTGTaGAGGGCATTGTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: FGSSGTRTLVQPDYPFIVGWVCV*RALFSG
Trigger: GCCAGAGAACAATGCCCTCAACACACAAACCCAGCC...CACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCGCGTCTTGGCTGTGGTaGCCGCTTTGCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: HGSSVPLELLKGLELSLSASWLW*PLCPGA
Trigger: AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGC...GCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS CCA 90 bp GCACATAAGCCAGGTGGACCTGAAAGAGCCAAGGGGCAGGAACAATaGCTGTTTCAGCAGCTACTCAATAGCGAAGGGTCAGCGTCCCAC +
Preference number: 5 (lower is better)
Translates to: AHKPGGPERAKGQEQ*LFQQLLNSEGSASH
Trigger: GTGGGACGCTGACCCTTCGCTATTGAGTAGCTGCTGAAACAGCCATTGTTCCTGCCCCTTGGCTCTTTCAGGTCCACCTGGCTTATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGGACCACTGGACGCCTaGGCTCAGGTGCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: PWEMAKESQDSHCILCLGGPLDA*AQVPAS
Trigger: AGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCC...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCTCCGGCGGTGCCTGGTaGGCCTCCTTTCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSSGGAW*ASFPLS
Trigger: AGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGA...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCTCCGGCGGTGCCTGGTaGGCCTCCTTTCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: SEPWEMAKESQDSHCILCSGGAW*ASFPLS
Trigger: AGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGA...GCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCCTGGCCCCCATTTCCTaGGGTCGTCTTTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSLAPIS*GRLCVL
Trigger: CAGGACACAAAGACGACCCAAGGAAATGGGGGCCAG...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGCTTAGTCTGAGCGCTGTGGTTGCCGCTTaGCCCTGGTGCTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: HGSSVPLELLKGLELSLSAVVAA*PWCFSD
Trigger: GTCAGAGAAGCACCAGGGCAAAGCGGCAACCACAGC...GCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGCGTCTTGGCTGTGGTaGCCGCTTTGCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALASWLW*PLCPGA
Trigger: AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGC...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CTGAAGGGCTTGGAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGGGCGGCCTTCAGTCTTaGGTTTCTCTGCGTCGTGGG +
Preference number: 5 (lower is better)
Translates to: LKGLELSLSHGKWPKSLKGGLQS*VSLRRG
Trigger: CCCACGACGCAGAGAAACCAAAGACTGAAGGCCGCC...CTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTCCAAGCCCTTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTGGCTCAGATTTGAAGTaGGCGGCCTTCAGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: PGRWYSRIIPSSCSRFQTGSDLK*AAFSLW
Trigger: CCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCC...AGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQGPGQF*ALAVPG
Trigger: TCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCC...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: KWPKSLKIPTVSCALEQAGPGQF*ALAVPG
Trigger: TCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCC...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: FGSSGTRTLVQPDYPFIVELLKG*ELSLSH
Trigger: ATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTC...CACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TTTGGCAGTTCCGGGACCAGGACGCTGGTACAGCCGGATTATCCCTTCATCGTGGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: FGSSGTRTLVQPDYPFIVGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...CACGATGAAGGGATAATCCGGCTGTACCAGCGTCCTGGTCCCGGAACTGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTAATGTTCTCTGTGCGTaGATGCCCTGTGGAATGCTA +
Preference number: 5 (lower is better)
Translates to: WPPFLCLRWCGPWAGFVCNVLCA*MPCGML
Trigger: TAGCATTCCACAGGGCATCAACGCACAGAGAACATT...ACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS CCA 90 bp CTCCATTCAGAGCCAGGAGTAGTTGAGCTCCATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCGGTCCCACTCACTCTGGTTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LHSEPGVVELHEAKG*CKVFQAVPLTLVEV
Trigger: CACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCAACTACTCCTGGCTCTGAATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590878.1
CDS CCA 90 bp ACACATAAGCCAGGTGGACCTGAAAGAGCCAAGGGGCAGGAACAATaGCTGTTTCAGCAGCTACTCAATAGCGAAGGGTCAGCGTCCCAC +
Preference number: 5 (lower is better)
Translates to: THKPGGPERAKGQEQ*LFQQLLNSEGSASH
Trigger: GTGGGACGCTGACCCTTCGCTATTGAGTAGCTGCTGAAACAGCCATTGTTCCTGCCCCTTGGCTCTTTCAGGTCCACCTGGCTTATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589992.1
CDS-3UTR CAA 90 bp TCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCAGATGGTTGTCCTCCTaGCCCTTGTGGGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SEPWEMAKESQDSHCILCRWLSS*PLWVPG
Trigger: CCCAGGCACCCACAAGGGCAAGGAGGACAACCATCT...GCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCGCTCTGCATAGATGGTaGTCCTCCTTGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: YSRIIPSSCSRFQTSLSSALHRW*SSLPLW
Trigger: CCACAAGGGCAAGGAGGACAACCATCTATGCAGAGC...GCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGGCCTTGGGCTGGGTTaGTGTGTTGAGGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: GTAGLSLHRVAASRLLSPGLGLG*CVEGIV
Trigger: AACAATGCCCTCAACACACAAACCCAGCCCAAGGCC...TGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTGTGTTGAGGGTTTTTCAGCAGGAATaGTGGTATTGGCCACCCATC +
Preference number: 5 (lower is better)
Translates to: SFPLSPVVWALGWVCVLRVFQQE*WYWPPI
Trigger: GATGGGTGGCCAATACCACAATTCCTGCTGAAAAAC...CCTCAACACACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp TGGTTGGCCTCCTTTCCTCTGTCTCCGGTGGTGTGGGCCTTGGGCTGGGTTTGTAATGCTAAGCAACTGTaGAAAGAAGGGAGTGGACCT +
Preference number: 5 (lower is better)
Translates to: WLASFPLSPVVWALGWVCNAKQL*KEGSGP
Trigger: AGGTCCACTCCCTTCTTTCAACAGTTGCTTAGCATT...ACAAACCCAGCCCAAGGCCCACACCACCGGAGACAGAGGAAAGGAGGCCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589813.5
CDS GCA 90 bp CATTCAGAGCCAGGAGTAGTTGAGCTCCATGAAGCCAAAGGGTGGTaGAAAGTGTTCCAGGCGGTCCCACTCACTCTGGTTGAAGTGTCT +
Preference number: 5 (lower is better)
Translates to: HSEPGVVELHEAKGW*KVFQAVPLTLVEVS
Trigger: AGACACTTCAACCAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCAACTACTCCTGGCTCTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590878.1
CDS-3UTR CAA 90 bp GGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCTCTGCATAGATGGTaGTCCTCCTTGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: GKWPKSLKIPTVSCALEQALHRW*SSLPLW
Trigger: CCACAAGGGCAAGGAGGACAACCATCTATGCAGAGC...CTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTCCGGCGGTGCCTGGTaGGCCTCCTTTCCTCTGTCT +
Preference number: 5 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSISGGAW*ASFPLS
Trigger: AGACAGAGGAAAGGAGGCCAACCAGGCACCGCCGGA...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTGCGTCTTGGCTGTGGTaGCCGCTTTGCCCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIASWLW*PLCPGA
Trigger: AGCACCAGGGCAAAGCGGCAACCACAGCCAAGACGC...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGATTGGGAATGAGCGTCTaGGCTGTGGTTGCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: PKSLKIPTVSCALEQARRLGMSV*AVVAAL
Trigger: CAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAA...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAAGCGACTTGGAGGCTTaGATCTTCACAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: GQRVSRFPLYPVPWSRQGSDLEA*IFTESG
Trigger: CCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCT...TCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCAAGTCTGGAGCCACAGCGACTaGGAGGCTTTGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: FWSHSDLEALIFTESGQVWSHSD*EALIFT
Trigger: TGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCA...GACTTGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp GAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCTTGGAGTCCCACTCACTCTGGTaGAAGTGTCTGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: ESLVHGSSVPLELLKGLESHSLW*KCLESR
Trigger: CCTGGACTCCAGACACTTCAACCAGAGTGAGTGGGA...CTCCAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCACCAAGAGGCACGTTCTaGAAACCCCGATTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: SQDSHCILCLGAGKETMAPRGTF*KPRLPN
Trigger: ATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGG...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGAGTCAGGGCACCAAGAGGCACGTTCTaGAAACCCCGATTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: EFLEPQRLGGFDLHRVRAPRGTF*KPRLPN
Trigger: ATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGG...TGCCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: MAKESQDSHCILCLGAGKTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCAGCAGGAATTGTGGTATaGGCCACCCATCACCCCATT +
Preference number: 5 (lower is better)
Translates to: SQDSHCILCLGAGKETMAAGIVV*ATHHPI
Trigger: AATGGGGTGATGGGTGGCCAATACCACAATTCCTGC...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATAGTAGTGATCAGAAAAGCGCTCATGGCCCTCAGTGATGAAGCCATAAGCACTAGATGGTTGTCCTCCTaGCCCTTGTGGGTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: IVVIRKALMALSDEAISTRWLSS*PLWVPG
Trigger: CCCAGGCACCCACAAGGGCAAGGAGGACAACCATCT...AGTGCTTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCGCTCTGCATAGATGGTaGTCCTCCTTGCCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSALHRW*SSLPLW
Trigger: CCACAAGGGCAAGGAGGACAACCATCTATGCAGAGC...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGATGTGTGTTGAGGGCATaGTTCTCTGGCACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: PKSLKIPTVSCALEQARRCVLRA*FSGTGS
Trigger: AGAGCCAGTGCCAGAGAACAATGCCCTCAACACACA...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCTCTGTCTCGTCCTTGTaGACACTGCTCCTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: MGNGQRVSRFPLYPVPWSSVSSL*TLLLWE
Trigger: CTCCCACAGGAGCAGTGTCAACAAGGACGAGACAGA...GCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GTTGGGCAGAAAGAGTTTCTGGAGCCACAGCGACTTGGAGGCTTTGATCTTCACAGCGACTTGGAGGCTTaGATCTTCACAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: VGQKEFLEPQRLGGFDLHSDLEA*IFTESG
Trigger: CCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCT...GTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCAGAAACTCTTTCTGCCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTGGCCCATGTGGGAGTaGTTCAGGATGCCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNWPMWE*FRMPPL
Trigger: CAACGGGGGCATCCTGAACAACTCCCACATGGGCCA...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGGCCCCGGTCAGTTCTaGGCTTTGGCAGTTCCGGGA +
Preference number: 5 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTGPGQF*ALAVPG
Trigger: TCCCGGAACTGCCAAAGCCAAGAACTGACCGGGGCC...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCACTGTATCCTGTGCCTaGGAGCAGGCAAGGAGACCA +
Preference number: 5 (lower is better)
Translates to: SEPWEMAKESQDSHCILCTVSCA*EQARRP
Trigger: TGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGT...GCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp CCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGAGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: PKSLKIPTVSCALEQARRELLKG*ELSLSH
Trigger: ATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTC...TCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp AAAGCCGTAGAAGGATGTCCGAGTCCCCACATCCTGTTCGTAGCCTTTAATGAGGATGTCCTGGAGCCCTaGATACCATCCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: KAVEGCPSPHILFVAFNEDVLEP*IPSWKA
Trigger: AGCCTTCCAGGATGGTATCAAGGGCTCCAGGACATC...CTCATTAAAGGCTACGAACAGGATGTGGGGACTCGGACATCCTTCTACGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS TCA 90 bp TCCCACTCCCATGCCTTGGCACCGCATCAGATGTCCTGGAGCCCTTaGTACCATCCTGGAAGGCTTTGTTTGAGGCTCCTTAATAAAAGA +
Preference number: 5 (lower is better)
Translates to: SHSHALAPHQMSWSP*YHPGRLCLRLLNKR
Trigger: TCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAGGATGGTATCAAGGGCTCCAGGACATCTGATGCGGTGCCAAGGCATGGGAGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589992.1
ENST00000592042.5
CDS-3UTR CAA 90 bp TCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCAAATGTTCTCTGTGCGTaGATGCCTGGAAGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: SQDSHCILCLGAGKETMANVLCA*MPGRLC
Trigger: ACAAAGCCTTCCAGGCATCAACGCACAGAGAACATT...TGCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000359088.9
CDS-3UTR CAA 90 bp GCATCTTGCCCTCTGGGTGACAGTGTGTTCACCATGGTTTTCTCTTTTTCTGGGTGTGTGTTGAGGGCATaGTTCTCTGGCACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: ASCPLGDSVFTMVFSFSGCVLRA*FSGTGS
Trigger: AGAGCCAGTGCCAGAGAACAATGCCCTCAACACACA...CCCAGAAAAAGAGAAAACCATGGTGAACACACTGTCACCCAGAGGGCAAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589813.5
ENST00000592042.5
CDS-3UTR CAA 90 bp CCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGATTCCTTGGGTCGTCTTaGTGTCCTGGCTCTTCCATG +
Preference number: 5 (lower is better)
Translates to: PWEMAKESQDSHCILCLGFLGSS*CPGSSM
Trigger: CATGGAAGAGCCAGGACACAAAGACGACCCAAGGAA...TCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTCTGGCCCCCATTTCCTaGGGTCGTCTTTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSILAPIS*GRLCVL
Trigger: CAGGACACAAAGACGACCCAAGGAAATGGGGGCCAG...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTCTGTCTCGTCCTTGTaGACACTGCTCCTGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LSLSHGKWPKSLKIPTVSSVSSL*TLLLWE
Trigger: CTCCCACAGGAGCAGTGTCAACAAGGACGAGACAGA...GGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGCTCAGATTTGAAGTaGGCGGCCTTCAGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: NGQRVSRFPLYPVPWSRQGSDLK*AAFSLW
Trigger: CCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCC...TTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAGGCTCAGATTTGAAGTaGGCGGCCTTCAGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: KWPKSLKIPTVSCALEQAGSDLK*AAFSLW
Trigger: CCAAAGACTGAAGGCCGCCAACTTCAAATCTGAGCC...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GACTTCTCTCTCCAGCTTGAAGTCATGGTTTATGTAAAAGATCAGCCGCTTCCATGGCCCATGTGGGAGTaGTTCAGGATGCCCCCGTTG +
Preference number: 5 (lower is better)
Translates to: DFSLQLEVMVYVKDQPLPWPMWE*FRMPPL
Trigger: CAACGGGGGCATCCTGAACAACTCCCACATGGGCCA...TGGAAGCGGCTGATCTTTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: WKSVFQQELWYWPPITPFGQFLA*AVPGPG
Trigger: TCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACC...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp ACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCAGCTAATGTTCTCTGTGCGTaGATGCACATAAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: TAGLSLHRVAASRLLSPANVLCA*MHISQV
Trigger: CACCTGGCTTATGTGCATCAACGCACAGAGAACATT...AGCTGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592042.5
CDS-3UTR CAA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTATGTGTGTTGAGGGCATaGTTCTCTGGCACTGGCTCT +
Preference number: 5 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLCVLRA*FSGTGS
Trigger: AGAGCCAGTGCCAGAGAACAATGCCCTCAACACACA...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCGGCCTTGGGCTGGGTTaGTGTGTTGAGGGCATTGTT +
Preference number: 5 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLGLGLG*CVEGIV
Trigger: AACAATGCCCTCAACACACAAACCCAGCCCAAGGCC...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCGCTGTGTGGGGCACCTaGTCCTGCTCCTCCGGCGGT +
Preference number: 5 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGAVWGT*SCSSGG
Trigger: ACCGCCGGAGGAGCAGGACAAGGTGCCCCACACAGC...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GAGCTTAGTCTGAGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATTCCTTGGGTCGTCTTaGTGTCCTGGCTCTTCCATG +
Preference number: 5 (lower is better)
Translates to: ELSLSHGKWPKSLKIPTVFLGSS*CPGSSM
Trigger: CATGGAAGAGCCAGGACACAAAGACGACCCAAGGAA...TACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCTCAGACTAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTTGGGAATGAGCGTCTaGGCTGTGGTTGCCGCTTTG +
Preference number: 5 (lower is better)
Translates to: NPWPQDLQQCTEELQNLNLGMSV*AVVAAL
Trigger: CAAAGCGGCAACCACAGCCAAGACGCTCATTCCCAA...ATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCGCTTCCAGACTTCTCTCTCCAGCTTGAAGTCATGGTTTATGTAAAAGATCAGGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: PLPDFSLQLEVMVYVKDQGQFLA*AVPGPG
Trigger: TCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACC...CTGATCTTTTACATAAACCATGACTTCAAGCTGGAGAGAGAAGTCTGGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp GGTACAGCCGGATTATCCCTTCATCGTGTAGCCGCTTCCAGACTTCTCTCTCCACATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: GTAGLSLHRVAASRLLSPHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...TGGAGAGAGAAGTCTGGAAGCGGCTACACGATGAAGGGATAATCCGGCTGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGGCTGGGTTTGTGTGTaGAGGGCATTGTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTGWVCV*RALFSG
Trigger: GCCAGAGAACAATGCCCTCAACACACAAACCCAGCC...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATAGTAGTGATCAGAAAAGCGCTCATGGCCCTCAGTGATGAAGCCATAAGCACTTTCCTTGGGTCGTCTTaGTGTCCTGGCTCTTCCATG +
Preference number: 5 (lower is better)
Translates to: IVVIRKALMALSDEAISTFLGSS*CPGSSM
Trigger: CATGGAAGAGCCAGGACACAAAGACGACCCAAGGAA...AGTGCTTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAGCGACTTGGAGGCTTaGATCTTCACAGAGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KNPWPQDLQQCTEELQNLSDLEA*IFTESG
Trigger: CCCTGACTCTGTGAAGATCAAAGCCTCCAAGTCGCT...GAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATAGTAGTGATCAGAAAAGCGCTCATGGCCCTCAGTGATGAAGCCATAAGCACTTGGAGCCACAGCGACTaGGAGGCTTTGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: IVVIRKALMALSDEAISTWSHSD*EALIFT
Trigger: TGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCA...AGTGCTTATGGCTTCATCACTGAGGGCCATGAGCGCTTTTCTGATCACTACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACAGGAAGAGAGTGAGGTaGGGCAGAAAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDRKRVR*GRKSFW
Trigger: CCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCT...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTCCAAGAGGCACGTTCTaGAAACCCCGATTGCCCAAT +
Preference number: 5 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIPRGTF*KPRLPN
Trigger: ATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGG...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATGGCACCAGAAAAGGTTTTTaGACATCACCGTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: VSRFPLYPVPWSRQGDHGTRKGF*TSPSDS
Trigger: TGAATCAGACGGTGATGTCAAAAAACCTTTTCTGGT...GCCATGGTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CAA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNGQFLA*AVPGPG
Trigger: TCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACC...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: IPGLRTYSNVLKNFRTSIELLKG*ELSLSH
Trigger: ATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTC...AATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGGAGACCATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: QRVSRFPLYPVPWSRQGDHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...GTCTCCTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS TCA 90 bp ATCAGATGTCCTGGAGCCCTTGATACCATCCTGGAAGGCTTTGTTTaGGGCTCCTTAATAAAAGAGGGCAAGGCGAAGAGAAAGAAGACC +
Preference number: 5 (lower is better)
Translates to: IRCPGALDTILEGFV*GSLIKEGKAKRKKT
Trigger: GGTCTTCTTTCTCTTCGCCTTGCCCTCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAGGATGGTATCAAGGGCTCCAGGACATCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589992.1
ENST00000592042.5
CDS-3UTR CAA 90 bp ATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCAAGCCTGGAAGGCTTTGTTaGAGGCTCCTTAATAAAAGA +
Preference number: 5 (lower is better)
Translates to: MAKESQDSHCILCLGAGKPGRLC*RLLNKR
Trigger: TCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAGG...CTTGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACAATGTTCTCTGTGCGTaGATGCCTGGAAGGCTTTGT +
Preference number: 5 (lower is better)
Translates to: CGIGHPSPHLIKNPWPQDNVLCA*MPGRLC
Trigger: ACAAAGCCTTCCAGGCATCAACGCACAGAGAACATT...GTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000359088.9
CDS-3UTR CAA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTCTGGCCCCCATTTCCTaGGGTCGTCTTTGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSLAPIS*GRLCVL
Trigger: CAGGACACAAAGACGACCCAAGGAAATGGGGGCCAG...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAACTTCAGAACTCCCACTCACTCTGGTaGAAGTGTCTGGAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: IKNPWPQDLQQCTEELQNSHSLW*KCLESR
Trigger: CCTGGACTCCAGACACTTCAACCAGAGTGAGTGGGA...GTTCTGAAGTTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGGAGCAGGCATTCTTGAAACCCCGATaGCCCAATATAAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: KWPKSLKIPTVSCALEQAFLKPR*PNIRSD
Trigger: GTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAA...TGCCTGCTCCAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTGCAGGAATTGTGGTATaGGCCACCCATCACCCCATT +
Preference number: 5 (lower is better)
Translates to: RNCGIGHPSPHLIKNPWPAGIVV*ATHHPI
Trigger: AATGGGGTGATGGGTGGCCAATACCACAATTCCTGC...AGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp GGTATTGGCCACCCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTAGTTTTTCAGCAGGAATaGTGGTATTGGCCACCCATC +
Preference number: 5 (lower is better)
Translates to: GIGHPSPHLIKNPWPQDLVFQQE*WYWPPI
Trigger: GATGGGTGGCCAATACCACAATTCCTGCTGAAAAAC...TAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGGGTGGCCAATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTGGCTGGGTTTGTGTGTaGAGGGCATTGTTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSGWVCV*RALFSG
Trigger: GCCAGAGAACAATGCCCTCAACACACAAACCCAGCC...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAATGGAGCCACAGCGACTaGGAGGCTTTGATCTTCACA +
Preference number: 5 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEEWSHSD*EALIFT
Trigger: TGTGAAGATCAAAGCCTCCAAGTCGCTGTGGCTCCA...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCATCACCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTAGGAAGAGAGTGAGGTaGGGCAGAAAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PSPHLIKNPWPQDLQQCTRKRVR*GRKSFW
Trigger: CCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCT...AGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGGTGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAAGAACTCCTGAAGGGCTaGGAGCTTAGTCTGAGCCAT +
Preference number: 5 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEEELLKG*ELSLSH
Trigger: ATGGCTCAGACTAAGCTCCAAGCCCTTCAGGAGTTC...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTAATGGTTCAAGTGTTCCCTaGGAACTCCTGAAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KSVFQQELWYWPPITPFNGSSVP*ELLKGL
Trigger: CAAGCCCTTCAGGAGTTCCAAGGGAACACTTGAACC...ATTAAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp ATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCCTGAAGGGCATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: ILRESCPWFKCSLGTPEGHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...CCCTTCAGGAGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp CCATTTGCCATCTTGAGAGAGTCTTGTCCATGGTTCAAGTGTTCCCTTGGAACTCATCTTGAGAGAGTCTaGTCCATGGTTCAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: PFAILRESCPWFKCSLGTHLERV*SMVQVF
Trigger: GAACACTTGAACCATGGACAAGACTCTCTCAAGATG...AGTTCCAAGGGAACACTTGAACCATGGACAAGACTCTCTCAAGATGGCAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000585633.1
ENST00000592042.5
CDS-3UTR CAA 90 bp ACCTACAGCAATGTACTGAAGAACTTCAGAACCTCAATTAGCCATTTGCCATCTAGGAAGAGAGTGAGGTaGGGCAGAAAGAGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: TYSNVLKNFRTSISHLPSRKRVR*GRKSFW
Trigger: CCAGAAACTCTTTCTGCCCAACCTCACTCTCTTCCT...AGATGGCAAATGGCTAATTGAGGTTCTGAAGTTCTTCAGTACATTGCTGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TACCTTCAAGATTTCACAACTGTAAACTCGATCTGGAATTCAAACCAGATCTATGGTCAGTTCTTGGCTTaGGCAGTTCCGGGACCAGGA +
Preference number: 5 (lower is better)
Translates to: YLQDFTTVNSIWNSNQIYGQFLA*AVPGPG
Trigger: TCCTGGTCCCGGAACTGCCAAAGCCAAGAACTGACC...ATAGATCTGGTTTGAATTCCAGATCGAGTTTACAGTTGTGAAATCTTGAAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp AGCCATGGGAAATGGCCAAAGAGTCTCAAGATTCCCACTGTATCCTGTGCCTTGTGTATCAAGAAGCTTTaGGACTGGAAGAGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: SHGKWPKSLKIPTVSCALCIKKL*DWKSVF
Trigger: AAAAACACTCTTCCAGTCCAAAAGCTTCTTGATACA...CAAGGCACAGGATACAGTGGGAATCTTGAGACTCTTTGGCCATTTCCCATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp TGGAAGAGTGTTTTTCAGCAGGAATTGTGGTATTGGCCACCCATCACCCCATTTTGTATCAAGAAGCTTTaGGACTGGAAGAGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: WKSVFQQELWYWPPITPFCIKKL*DWKSVF
Trigger: AAAAACACTCTTCCAGTCCAAAAGCTTCTTGATACA...AAATGGGGTGATGGGTGGCCAATACCACAATTCCTGCTGAAAAACACTCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS-3UTR CAA 90 bp CCCCATTTAATTAAAAATCCCTGGCCTCAGGACCTACAGCAATGTACTGAAGAAACCAGAAAAGGTTTTTaGACATCACCGTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: PHLIKNPWPQDLQQCTEETRKGF*TSPSDS
Trigger: TGAATCAGACGGTGATGTCAAAAAACCTTTTCTGGT...TTCTTCAGTACATTGCTGTAGGTCCTGAGGCCAGGGATTTTTAATTAAATGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000156626.12
ENST00000592042.5
CDS-3UTR CAA 90 bp TGTAAACTCGATCTGGAATTCAAACCAGATCTATATGTTTCTGTAAATCCAGGCTTCTTGAAACCCCGATaGCCCAATATAAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: CKLDLEFKPDLYVSVNPGFLKPR*PNIRSD
Trigger: GTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAA...GCCTGGATTTACAGAAACATATAGATCTGGTTTGAATTCCAGATCGAGTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000592042.5
CDS GCA 72 bp GCCAGAAGCAAGGACCACTGGACGCCTTGGCTCAGGTaGCTGCATCTCCACAGGCAGGACCTCATGGTGGTG +
Preference number: 6 (lower is better)
Translates to: ARSKDHWTPWLR*LHLHRQDLMVV
Trigger: CACCACCATGAGGTCCTGCCTGTGGAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000589813.5
ENST00000589992.1
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS CCA 72 bp GGTGGGTCGGGTTCTAGAGGAAGGTTCTGCATGTCCTaGGGCCTTGATGTAGGCAGCTGGGAGTCTCACCGC +
Preference number: 6 (lower is better)
Translates to: GGSGSRGRFCMS*GLDVGSWESHR
Trigger: GCGGTGAGACTCCCAGCTGCCTACATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS GCA 72 bp CCTCATGGTGGTGGGTCGGGTTCTAGAGGAAGGTTCTaGATGTCCTGGGGCCTTGATGTAGGCAGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: PHGGGSGSRGRF*MSWGLDVGSWE
Trigger: CTCCCAGCTGCCTACATCAAGGCCCCAGGACATGCAGAACCTTCCTCTAGAACCCGACCCACCACCATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000156626.12
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS GCA 72 bp TGCTGGGGCACTGGAGGGAAGCGTGTCACGACCTTCTaGACCACTGGAACAAGAGTGGGGGTGCTCCATTCA +
Preference number: 6 (lower is better)
Translates to: CWGTGGKRVTTF*TTGTRVGVLHS
Trigger: TGAATGGAGCACCCCCACTCTTGTTCCAGTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTGCCCCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590878.1
CDS CCA 72 bp CACTGGAGGGAAGCGTGTCACGACCTTCTGCACCACTaGAACAAGAGTGGGGGTGCTCCATTCAGAGCCAGG +
Preference number: 6 (lower is better)
Translates to: HWREACHDLLHH*NKSGGAPFRAR
Trigger: CCTGGCTCTGAATGGAGCACCCCCACTCTTGTTCCAGTGGTGCAGAAGGTCGTGACACGCTTCCCTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590878.1
CDS CAA 72 bp CTCTGTTGTCTAGGCTGGTGGCACGTTCACAGCTCATaGCAGCCTCGACCTCCCGGGCTCAAACGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LCCLGWWHVHSS*QPRPPGLKRVS
Trigger: GGAGACTCGTTTGAGCCCGGGAGGTCGAGGCTGCAATGAGCTGTGAACGTGCCACCAGCCTAGACAACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590915.1
CDS CAA 90 bp GAGAAAGAAGACCAGGACAGCCAGAAGCAAGGACCACTGGACGCCTaGGCTCAGGTGCCTGCATCTCCACAGGCAGGACCTCATGGTGGT +
Preference number: 6 (lower is better)
Translates to: EKEDQDSQKQGPLDA*AQVPASPQAGPHGG
Trigger: ACCACCATGAGGTCCTGCCTGTGGAGATGCAGGCACCTGAGCCAAGGCGTCCAGTGGTCCTTGCTTCTGGCTGTCCTGGTCTTCTTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000589813.5
ENST00000589992.1
ENST00000590878.1
ENST00000590915.1
ENST00000592042.5
CDS CAA 90 bp AGACTGAGTCTCTGTTGTCTAGGCTGGTGGCACGTTCACAGCTCATaGCAGCCTCGACCTCCCGGGCTCAAACGAGTCTCCTGCCTTGGC +
Preference number: 6 (lower is better)
Translates to: RLSLCCLGWWHVHSS*QPRPPGLKRVSCLG
Trigger: GCCAAGGCAGGAGACTCGTTTGAGCCCGGGAGGTCGAGGCTGCAATGAGCTGTGAACGTGCCACCAGCCTAGACAACAGAGACTCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590915.1
CDS CCA 72 bp GAGCCAGGAGTAGTTGAGCTCCATGAAGCCAAAGGGTaGTGCAAAGTGTTCCAGGCGGTCCCACTCACTCTG +
Preference number: 6 (lower is better)
Translates to: EPGVVELHEAKG*CKVFQAVPLTL
Trigger: CAGAGTGAGTGGGACCGCCTGGAACACTTTGCACCACCCTTTGGCTTCATGGAGCTCAACTACTCCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590878.1
CDS CAA 90 bp CCTGGGGTCTGTGCCTTCCCAAGAGGCACGTTCTTGAAACCCCGATaGCCCAATATAAGGAGTGACTGGGTCAGGGAGAAGGCGGTAAAG +
Preference number: 6 (lower is better)
Translates to: PGVCAFPRGTFLKPR*PNIRSDWVREKAVK
Trigger: CTTTACCGCCTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000588375.1
CDS TCA 72 bp CATGCCTTGGCACCGCATCAGATGTCCTGGAGCCCTTaGTACCATCCTGGAAGGCTTTGTTTGAGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: HALAPHQMSWSP*YHPGRLCLRLL
Trigger: AAGGAGCCTCAAACAAAGCCTTCCAGGATGGTATCAAGGGCTCCAGGACATCTGATGCGGTGCCAAGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589992.1
ENST00000592042.5
CDS CCA 72 bp CCAGGTGGACCTGAAAGAGCCAAGGGGCAGGAACAATaGCTGTTTCAGCAGCTACTCAATAGCGAAGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGGPERAKGQEQ*LFQQLLNSEGS
Trigger: TGACCCTTCGCTATTGAGTAGCTGCTGAAACAGCCATTGTTCCTGCCCCTTGGCTCTTTCAGGTCCACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589992.1
ENST00000592042.5
CDS CAA 72 bp CTTCCTGGGGTCTGTGCCTTCCCAAGAGGCACGTTCTaGAAACCCCGATTGCCCAATATAAGGAGTGACTGG +
Preference number: 6 (lower is better)
Translates to: LPGVCAFPRGTF*KPRLPNIRSDW
Trigger: CCAGTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGGGAAGGCACAGACCCCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000588375.1
CDS CAA 72 bp TGTGCCTTCCCAAGAGGCACGTTCTTGAAACCCCGATaGCCCAATATAAGGAGTGACTGGGTCAGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: CAFPRGTFLKPR*PNIRSDWVREK
Trigger: CTTCTCCCTGACCCAGTCACTCCTTATATTGGGCAATCGGGGTTTCAAGAACGTGCCTCTTGGGAAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359088.9
ENST00000588375.1
CDS CAA 72 bp AATGTTCTCTGTGCGTTGATGCCTGGAAGGCTTTGTTaGAGGCTCCTTAATAAAAGAGGGCAAGGCGAAGAG +
Preference number: 6 (lower is better)
Translates to: NVLCALMPGRLC*RLLNKRGQGEE
Trigger: CTCTTCGCCTTGCCCTCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAGGCATCAACGCACAGAGAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000156626.12
ENST00000359088.9
ENST00000590878.1
CDS TCA 72 bp AGTGTGACTTACAAGGTCAACCTGGAAGGCTTTGTTTaGGGCTCCTTAATAAAAGAGGGCAAGGCGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SVTYKVNLEGFV*GSLIKEGKAKR
Trigger: TCTCTTCGCCTTGCCCTCTTTTATTAAGGAGCCTCAAACAAAGCCTTCCAGGTTGACCTTGTAAGTCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589813.5