RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ST6GAL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144057

Ensembl transcript IDs: ENST00000361686.8, ENST00000361803.3, ENST00000409087.3, ENST00000409382.7, ENST00000419159.2

Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCCGTCTTCCCCAGCACAGCTGTGCCAATTGTCAAGTGTGTCACTaGCTATGCAAAAGCTGCAGGGTAGATCTGCAGGTGAGGAGGTAC +
Preference number: 1 (lower is better)
Translates to: SRLPQHSCANCQVCH*LCKSCRVDLQVRRY
Trigger: GTACCTCCTCACCTGCAGATCTACCCTGCAGCTTTTGCATAGTCAGTGACACACTTGACAATTGGCACAGCTGTGCTGGGGAAGACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 90 bp AGTTTGGAAGGAGCAAGGTGTCTCCCGTCTTCCCCAGCACAGCTGTaGCAATTGTCAAGTGTGTCACTGACTATGCAAAAGCTGCAGGGT +
Preference number: 1 (lower is better)
Translates to: SLEGARCLPSSPAQL*QLSSVSLTMQKLQG
Trigger: ACCCTGCAGCTTTTGCATAGTCAGTGACACACTTGACAATTGGCACAGCTGTGCTGGGGAAGACGGGAGACACCTTGCTCCTTCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR TCA 90 bp GATGCTATGGCTACAATGACTGAGGACTACTGGAGAGTCCAGGATTaGTTAAGTGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGG +
Preference number: 1 (lower is better)
Translates to: DAMATMTEDYWRVQD*LSVWLRDQEDQTHG
Trigger: CCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACACTTAATCAATCCTGGACTCTCCAGTAGTCCTCAGTCATTGTAGCCATAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 90 bp GACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGCTCTaGCTTCAGGCAGACAAGGAAAGACCTGGTCGTTCAAAGATGTAT +
Preference number: 1 (lower is better)
Translates to: DQEDQTHGKCCFSKL*LQADKERPGRSKMY
Trigger: ATACATCTTTGAACGACCAGGTCTTTCCTTGTCTGCCTGAAGGCAGAGCTTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR TCA 90 bp GCCAGTGATGTGCCTCCTGGTGGATGTGATACTAATGTTCCTGGTTaGAATACTGCAGGGAAACAAAGGGCCTCCTCTGTGGTGCTATAT +
Preference number: 1 (lower is better)
Translates to: ASDVPPGGCDTNVPG*NTAGKQRASSVVLY
Trigger: ATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCAGTATTTCAACCAGGAACATTAGTATCACATCCACCAGGAGGCACATCACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 90 bp AGGGGCACCTGCAGCCCTGTGATTCTATGTTACTTGCCAGTGATGTaGCTCCTGGTGGATGTGATACTAATGTTCCTGGTTGAAATACTG +
Preference number: 1 (lower is better)
Translates to: RGTCSPVILCYLPVM*LLVDVILMFLVEIL
Trigger: CAGTATTTCAACCAGGAACATTAGTATCACATCCACCAGGAGGCACATCACTGGCAAGTAACATAGAATCACAGGGCTGCAGGTGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 90 bp TTCCTGGTTGAAATACTGCAGGGAAACAAAGGGCCTCCTCTGTGGTaGTATATGGAATTTGGCTTTTTCTTGGACCTTTCAAGATGGATG +
Preference number: 1 (lower is better)
Translates to: FLVEILQGNKGPPLW*YMEFGFFLDLSRWM
Trigger: CATCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCAGTATTTCAACCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 90 bp ATGTTCCTGGTTGAAATACTGCAGGGAAACAAAGGGCCTCCTCTGTaGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTCAAGATGG +
Preference number: 1 (lower is better)
Translates to: MFLVEILQGNKGPPL*CYMEFGFFLDLSRW
Trigger: CCATCTTGAAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCAGTATTTCAACCAGGAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 90 bp TCACCAAAACCTGTCATTGAAACCAACCCTGATGAGGGGTACTCATaGCAGAAGAATAAGTTGTTAACATTTCTGGAGGTATCATACCCA +
Preference number: 1 (lower is better)
Translates to: SPKPVIETNPDEGYS*QKNKLLTFLEVSYP
Trigger: TGGGTATGATACCTCCAGAAATGTTAACAACTTATTCTTCTGCCATGAGTACCCCTCATCAGGGTTGGTTTCAATGACAGGTTTTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 90 bp TTGAAATACTGCAGGGAAACAAAGGGCCTCCTCTGTGGTGCTATATaGAATTTGGCTTTTTCTTGGACCTTTCAAGATGGATGTTTTCTG +
Preference number: 1 (lower is better)
Translates to: LKYCRETKGLLCGAI*NLAFSWTFQDGCFL
Trigger: CAGAAAACATCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCAGTATTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 90 bp AAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTaGCTTGATCAGTCATGTAACCACTGGGTAAGAGTTCTAAACTAT +
Preference number: 1 (lower is better)
Translates to: KLRDILPKQLISRWS*LDQSCNHWVRVLNY
Trigger: ATAGTTTAGAACTCTTACCCAGTGGTTACATGACTGATCAAGGCAACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 90 bp CGGGGAGTGTCCAGGGGCACCTGCAGCCCTGTGATTCTATGTTACTaGCCAGTGATGTGCCTCCTGGTGGATGTGATACTAATGTTCCTG +
Preference number: 2 (lower is better)
Translates to: RGVSRGTCSPVILCY*PVMCLLVDVILMFL
Trigger: CAGGAACATTAGTATCACATCCACCAGGAGGCACATCACTGGCAAGTAACATAGAATCACAGGGCTGCAGGTGCCCCTGGACACTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGAAATTAGAAAGGAATaGCCGGGCGCGGTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEEIRKE*PGAVVA
Trigger: AGCCACCACCGCGCCCGGTCATTCCTTTCTAATTTC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGTGTCCAGGGGCACCTaGAGCCCTGTGATTCTATGT +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEVSRGT*SPVILC
Trigger: ACATAGAATCACAGGGCTGCAGGTGCCCCTGGACAC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGCACCTGCAGCCCTGTaGTTCTATGTTACTTGCCAG +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEAPAAL*FYVTCQ
Trigger: CTGGCAAGTAACATAGAATCACAGGGCTGCAGGTGC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAGGCAGAGCTGGCAGTaGACCAAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTRQSWQ*TKIAPL
Trigger: CAGTGGTGCGATCTTGGTTCACTGCCAGCTCTGCCT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGCTGAGGCAGGAGAATaGTGTGAACGTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTAEAGE*CERGRQ
Trigger: CTGCCTCCCACGTTCACACCATTCTCCTGCCTCAGC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGGGCCTCCTCTGTGGTaGTATATGGAATTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEGPPLW*YMEFGF
Trigger: AAAGCCAAATTCCATATAGCACCACAGAGGAGGCCC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAGCTGCCTTTCCCTCTaGAGCATCTACATATTTTCC +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLESCLSL*SIYIFS
Trigger: GGAAAATATGTAGATGCTTCAGAGGGAAAGGCAGCT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACTGTTGAACAGAGCCTaGTTCCCAAGAGTCTTTAAG +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELLNRA*FPRVFK
Trigger: CTTAAAGACTCTTGGGAATCAGGCTCTGTTCAACAG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACAGTGCTCATCACTGTaGAGTTCCCACTGGCTGATA +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTQCSSL*SSHWLI
Trigger: TATCAGCCAGTGGGAACTCCACAGTGATGAGCACTG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAACTAATGTTCCTGGTTaGAATACTGCAGGGAAACAA +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLETNVPG*NTAGKQ
Trigger: TTGTTTCCCTGCAGTATTTCAACCAGGAACATTAGT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGTCAAGTGTGTCACTaGCTATGCAAAAGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTCQVCH*LCKSCR
Trigger: CCTGCAGCTTTTGCATAGTCAGTGACACACTTGACA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAGGCAGAGCTGGCAGTaGACCAAGATCGCACCACTG +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSRQSWQ*TKIAPL
Trigger: CAGTGGTGCGATCTTGGTTCACTGCCAGCTCTGCCT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGTCTGGCAAAATGCTaGCACTTAGGACCCATTTGG +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTCLAKC*HLGPIW
Trigger: CCAAATGGGTCCTAAGTGGCAGCATTTTGCCAGACA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACTGTGGAGTTCCCACTaGCTGATAAAAACCTGCAAG +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTLWSSH*LIKTCK
Trigger: CTTGCAGGTTTTTATCAGCCAGTGGGAACTCCACAG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGCTGAGGCAGGAGAATaGTGTGAACGTGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSAEAGE*CERGRQ
Trigger: CTGCCTCCCACGTTCACACCATTCTCCTGCCTCAGC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGAAAGGTCAGCTCCCTaGGACGAGCATCGGTATTCC +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRERSAP*DEHRYS
Trigger: GGAATACCGATGCTCGTCCCAGGGAGCTGACCTTTC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAGAGAAGGATTATCATaGCCACCACTAAATTACTGT +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEREGLS*PPLNYC
Trigger: ACAGTAATTTAGTGGTGGTCATGATAATCCTTCTCT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAGAAATTCAGTGAGCTaGCACTTACTGTTAACTACT +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLERNSVS*HLLLTT
Trigger: AGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGCACCTGCAGCCCTGTaGTTCTATGTTACTTGCCAG +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSAPAAL*FYVTCQ
Trigger: CTGGCAAGTAACATAGAATCACAGGGCTGCAGGTGC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGCTAACATATTGGGATaGAAATTTCCCTCTAGCTGC +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTANILG*KFPSSC
Trigger: GCAGCTAGAGGGAAATTTTCATCCCAATATGTTAGC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATCCCCAGCACAGCTGTaGCAATTGTCAAGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRSPAQL*QLSSVS
Trigger: TGACACACTTGACAATTGGCACAGCTGTGCTGGGGA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACAGACACATGGGAAGTaGTGTTTCTCGAAGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRQTHGK*CFSKLC
Trigger: GCAGAGCTTCGAGAAACAGCACTTCCCATGTGTCTG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAAATCTTTAAAGTGTTaGGTTCTGAGGCTTTTGAAC +
Preference number: 2 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEKSLKC*VLRLLN
Trigger: GTTCAAAAGCCTCAGAACCCAACACTTTAAAGATTT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCCTAGAAGCACAGGGTaGTGGCTCCAAAATCTTTCC +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSPRSTG*WLQNLS
Trigger: GGAAAGATTTTGGAGCCATCACCCTGTGCTTCTAGG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTCCCCAGCACAGCTGTaGCAATTGTCAAGTGTGTCA +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSSPAQL*QLSSVS
Trigger: TGACACACTTGACAATTGGCACAGCTGTGCTGGGGA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTATAAAAGCCCTCCCTTaGCCATCCAAGCCTGATGCT +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSIKALP*PSKPDA
Trigger: AGCATCAGGCTTGGATGGGCAAGGGAGGGCTTTTAT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACTCTGTGGTGCTATATaGAATTTGGCTTTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTLCGAI*NLAFSW
Trigger: CCAAGAAAAAGCCAAATTCCATATAGCACCACAGAG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACACTTAGGACCCATTTaGCTAATACTAGAAGTAGTC +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTHLGPI*LILEVV
Trigger: GACTACTTCTAGTATTAGCCAAATGGGTCCTAAGTG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAGAGGACCAGACACATaGGAAGTGCTGTTTCTCGAA +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRRGPDT*EVLFLE
Trigger: TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACCTATCCCTTCTCATTaGCTTAATAACAAAACTCTC +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTPIPSH*LNNKTL
Trigger: GAGAGTTTTGTTATTAAGTCAATGAGAAGGGATAGG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATTGCCCATCCAAGCCTaGTGCTTACATGCAACTTTT +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLPIQA*CLHATF
Trigger: AAAAGTTGCATGTAAGCATCAGGCTTGGATGGGCAA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTCCTGGTTGAAATACTaGAGGGAAACAAAGGGCCTC +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSSWLKY*RETKGL
Trigger: GAGGCCCTTTGTTTCCCTGCAGTATTTCAACCAGGA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACAGTGCTCATCACTGTaGAGTTCCCACTGGCTGATA +
Preference number: 2 (lower is better)
Translates to: QESSPENSLEETNPETKKQCSSL*SSHWLI
Trigger: TATCAGCCAGTGGGAACTCCACAGTGATGAGCACTG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 90 bp ATTGAAACCAACCCTGATGAGGGGTACTCATGGCAGAAGAATAAGTaGTTAACATTTCTGGAGGTATCATACCCATGGTCATACATGTGT +
Preference number: 2 (lower is better)
Translates to: IETNPDEGYSWQKNK*LTFLEVSYPWSYMC
Trigger: ACACATGTATGACCATGGGTATGATACCTCCAGAAATGTTAACAACTTATTCTTCTGCCATGAGTACCCCTCATCAGGGTTGGTTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAACAGTAGTACCTTATTaGACATTGATTCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTTVVPY*TLIPKK
Trigger: TTTCTTGGGAATCAATGTGCAATAAGGTACTACTGT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAGCTATCCTTGGTTTTaGATCTTTCTTGAGCCTTAT +
Preference number: 2 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLSYPWF*IFLEPY
Trigger: ATAAGGCTCAAGAAAGATGCAAAACCAAGGATAGCT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAAGCAAAGCATTCAGTaGGCAATGGGAGGCAGAGAT +
Preference number: 2 (lower is better)
Translates to: QESSPENSLEETNPETKKKQSIQ*AMGGRD
Trigger: ATCTCTGCCTCCCATTGCCCACTGAATGCTTTGCTT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACTGTGGAGTTCCCACTaGCTGATAAAAACCTGCAAG +
Preference number: 2 (lower is better)
Translates to: QESSPENSLEETNPETKKLWSSH*LIKTCK
Trigger: CTTGCAGGTTTTTATCAGCCAGTGGGAACTCCACAG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAAATCTTTAAAGTGTTaGGTTCTGAGGCTTTTGAAC +
Preference number: 2 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTKSLKC*VLRLLN
Trigger: GTTCAAAAGCCTCAGAACCCAACACTTTAAAGATTT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGAATGCATGTATAACTaGCACACTCGATGCTGTAAA +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRECMYN*HTRCCK
Trigger: TTTACAGCATCGAGTGTGTCAGTTATACATGCATTC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGCTAACATATTGGGATaGAAATTTCCCTCTAGCTGC +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSANILG*KFPSSC
Trigger: GCAGCTAGAGGGAAATTTTCATCCCAATATGTTAGC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGATGAGGGGTACTCATaGCAGAAGAATAAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRDEGYS*QKNKLL
Trigger: TAACAACTTATTCTTCTGCCATGAGTACCCCTCATC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCAAGGGGGATTATGCTaGATAGTAAGGATGTCTACA +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSQGGLC*IVRMST
Trigger: TGTAGACATCCTTACTATCCAGCATAATCCCCCTTG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTTTAGAACTCTGTCTTaGTGCACAGAAAGCAAAGCA +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSFRTLS*CTESKA
Trigger: TGCTTTGCTTTCTGTGCATCAAGACAGAGTTCTAAA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTACATTTATTGACTGTTaGACAGAGCCTGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSTFIDC*TEPDSQ
Trigger: TTGGGAATCAGGCTCTGTTCAACAGTCAATAAATGT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTATTCAACCAAGTAACTaGCCACATGTACTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSIQPSN*PHVLCV
Trigger: AACACACAGTACATGTGGTCAGTTACTTGGTTGAAT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGAATCTAGATATGGTTaGATTGTCATTGCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSESRYG*IVIAAQ
Trigger: TTGAGCAGCAATGACAATTCAACCATATCTAGATTC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGTGACCCAGCTACTTTaGTTTCCTAATTTTGAAAAC +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSVTQLL*FPNFEN
Trigger: GTTTTCAAAATTAGGAAATCAAAGTAGCTGGGTCAC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAGAAATTCAGTGAGCTaGCACTTACTGTTAACTACT +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSRNSVS*HLLLTT
Trigger: AGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGAGGTATCATACCCATaGTCATACATGTGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSEVSYP*SYMCFL
Trigger: AAGAAAACACATGTATGACCATGGGTATGATACCTC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGATGAGGGGTACTCATaGCAGAAGAATAAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: QESSPENSLEETNPETKKDEGYS*QKNKLL
Trigger: TAACAACTTATTCTTCTGCCATGAGTACCCCTCATC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAATAAACCACTTCATATaGTCAGGAACATCACCAAAA +
Preference number: 2 (lower is better)
Translates to: SVSMICPAELTGSYTCKRINHFI*SGTSPK
Trigger: TTTTGGTGATGTTCCTGACCATATGAAGTGGTTTAT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACTCTGTGGTGCTATATaGAATTTGGCTTTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: QESSPENSLEETNPETKKLCGAI*NLAFSW
Trigger: CCAAGAAAAAGCCAAATTCCATATAGCACCACAGAG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCAGTCATGTAACCACTaGGTAAGAGTTCTAAACTAT +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSQSCNH*VRVLNY
Trigger: ATAGTTTAGAACTCTTACCCAGTGGTTACATGACTG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAATTCAATCACATACTaGCACTCATCTAAGACTGAT +
Preference number: 2 (lower is better)
Translates to: DKLKLRDILPKQLISRWSNSITY*HSSKTD
Trigger: ATCAGTCTTAGATGAGTGCCAGTATGTGATTGAATT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 90 bp CATTCATACATTTTGCAAGGGAGAACGCATTTAATTAAGCTGCTATaGTCATTGCAACAAGTCTTAACTGTACCATGGAGATATGTTTTG +
Preference number: 2 (lower is better)
Translates to: HSYILQGRTHLIKLL*SLQQVLTVPWRYVL
Trigger: CAAAACATATCTCCATGGTACAGTTAAGACTTGTTGCAATGACAATAGCAGCTTAATTAAATGCGTTCTCCCTTGCAAAATGTATGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTAGAGAAGGATTATCATaGCCACCACTAAATTACTGT +
Preference number: 2 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCREGLS*PPLNYC
Trigger: ACAGTAATTTAGTGGTGGTCATGATAATCCTTCTCT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTAGCTATCCTTGGTTTTaGATCTTTCTTGAGCCTTAT +
Preference number: 2 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCSYPWF*IFLEPY
Trigger: ATAAGGCTCAAGAAAGATGCAAAACCAAGGATAGCT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTACAGTAGTACCTTATTaGACATTGATTCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCTVVPY*TLIPKK
Trigger: TTTCTTGGGAATCAATGTGCAATAAGGTACTACTGT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 72 bp TGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTaGTGTTTCTCGAAGCTCTGCCTTCAGGCAGACAAG +
Preference number: 3 (lower is better)
Translates to: WLRDQEDQTHGK*CFSKLCLQADK
Trigger: CTTGTCTGCCTGAAGGCAGAGCTTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR TCA 72 bp CCCCAGCACAGCTGTGCCAATTGTCAAGTGTGTCACTaGCTATGCAAAAGCTGCAGGGTAGATCTGCAGGTG +
Preference number: 3 (lower is better)
Translates to: PQHSCANCQVCH*LCKSCRVDLQV
Trigger: CACCTGCAGATCTACCCTGCAGCTTTTGCATAGTCAGTGACACACTTGACAATTGGCACAGCTGTGCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 72 bp GACCAGACACATGGGAAGTGCTGTTTCTCGAAGCTCTaGCTTCAGGCAGACAAGGAAAGACCTGGTCGTTCA +
Preference number: 3 (lower is better)
Translates to: DQTHGKCCFSKL*LQADKERPGRS
Trigger: TGAACGACCAGGTCTTTCCTTGTCTGCCTGAAGGCAGAGCTTCGAGAAACAGCACTTCCCATGTGTCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 72 bp CACAGGGTGATGGCTCCAAAATCTTTCCTTCTAGTTTaGAAGGAGCAAGGTGTCTCCCGTCTTCCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: HRVMAPKSFLLV*KEQGVSRLPQH
Trigger: GTGCTGGGGAAGACGGGAGACACCTTGCTCCTTCCAAACTAGAAGGAAAGATTTTGGAGCCATCACCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR TCA 72 bp GCTACAATGACTGAGGACTACTGGAGAGTCCAGGATTaGTTAAGTGTCTGGCTGAGAGACCAAGAGGACCAG +
Preference number: 3 (lower is better)
Translates to: ATMTEDYWRVQD*LSVWLRDQEDQ
Trigger: CTGGTCCTCTTGGTCTCTCAGCCAGACACTTAATCAATCCTGGACTCTCCAGTAGTCCTCAGTCATTGTAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACTGAGGCTTTTGAACTaGAATATTTACACTGACCCC +
Preference number: 3 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELRLLN*NIYTDP
Trigger: GGGGTCAGTGTAAATATTCAAGTTCAAAAGCCTCAG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGAATTTGGCTTTTTCTaGGACCTTTCAAGATGGATG +
Preference number: 3 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEEFGFF*DLSRWM
Trigger: CATCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGTGATTCTATGTTACTaGCCAGTGATGTGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTVILCY*PVMCLL
Trigger: CAGGAGGCACATCACTGGCAAGTAACATAGAATCAC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 72 bp TGCAGCCCTGTGATTCTATGTTACTTGCCAGTGATGTaGCTCCTGGTGGATGTGATACTAATGTTCCTGGTT +
Preference number: 3 (lower is better)
Translates to: CSPVILCYLPVM*LLVDVILMFLV
Trigger: AACCAGGAACATTAGTATCACATCCACCAGGAGGCACATCACTGGCAAGTAACATAGAATCACAGGGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAACAGTAGTACCTTATaGCACATTGATTCCCAAGAA +
Preference number: 3 (lower is better)
Translates to: CLAERPRGPDTWEVLFLENSSTL*HIDSQE
Trigger: TTCTTGGGAATCAATGTGCAATAAGGTACTACTGTT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCACCAAAACCTGTCATaGAAACCAACCCTGATGAGG +
Preference number: 3 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLHQNLS*KPTLMR
Trigger: CCTCATCAGGGTTGGTTTCAATGACAGGTTTTGGTG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 72 bp GACCTGGTCGTTCAAAGATGTATAAAAGCCCTCCCTTaGCCATCCAAGCCTGATGCTTACATGCAACTTTTA +
Preference number: 3 (lower is better)
Translates to: DLVVQRCIKALP*PSKPDAYMQLL
Trigger: TAAAAGTTGCATGTAAGCATCAGGCTTGGATGGGCAAGGGAGGGCTTTTATACATCTTTGAACGACCAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 72 bp TGCAGGGAAACAAAGGGCCTCCTCTGTGGTGCTATATaGAATTTGGCTTTTTCTTGGACCTTTCAAGATGGA +
Preference number: 3 (lower is better)
Translates to: CRETKGLLCGAI*NLAFSWTFQDG
Trigger: TCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGCACAGCTGTGCCAATaGTCAAGTGTGTCACTGACT +
Preference number: 3 (lower is better)
Translates to: SVSMICPAELTGSYTCKRAQLCQ*SSVSLT
Trigger: AGTCAGTGACACACTTGACAATTGGCACAGCTGTGC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGCTATAGGAGATGTCTaGTTTTCCAGCTCCATATCT +
Preference number: 3 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTAIGDV*FSSSIS
Trigger: AGATATGGAGCTGGAAAACAAGACATCTCCTATAGC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACTGGAGAGTCCAGGATaGATTAAGTGTCTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLESPG*IKCLAE
Trigger: CTCAGCCAGACACTTAATCAATCCTGGACTCTCCAG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 72 bp GAAATACTGCAGGGAAACAAAGGGCCTCCTCTGTGGTaGTATATGGAATTTGGCTTTTTCTTGGACCTTTCA +
Preference number: 3 (lower is better)
Translates to: EILQGNKGPPLW*YMEFGFFLDLS
Trigger: TGAAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCAGTATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 72 bp GTTGAAATACTGCAGGGAAACAAAGGGCCTCCTCTGTaGTGCTATATGGAATTTGGCTTTTTCTTGGACCTT +
Preference number: 3 (lower is better)
Translates to: VEILQGNKGPPL*CYMEFGFFLDL
Trigger: AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTCCCTGCAGTATTTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGTACCTTATTGCACATaGATTCCCAAGAAACCCTTT +
Preference number: 3 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTVPYCT*IPKKPF
Trigger: AAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTAC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACACCAAAACCTGTCATaGAAACCAACCCTGATGAGG +
Preference number: 3 (lower is better)
Translates to: SVSMICPAELTGSYTCKRHQNLS*KPTLMR
Trigger: CCTCATCAGGGTTGGTTTCAATGACAGGTTTTGGTG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGTGCTGGGAATTTTTaGCTGTTAAACACATCTGAG +
Preference number: 3 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTCAGNF*LLNTSE
Trigger: CTCAGATGTGTTTAACAGCAAAAAATTCCCAGCACA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGTGATTCTATGTTACTaGCCAGTGATGTGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: SVSMICPAELTGSYTCKRVILCY*PVMCLL
Trigger: CAGGAGGCACATCACTGGCAAGTAACATAGAATCAC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CCA 72 bp CCTGTCATTGAAACCAACCCTGATGAGGGGTACTCATaGCAGAAGAATAAGTTGTTAACATTTCTGGAGGTA +
Preference number: 3 (lower is better)
Translates to: PVIETNPDEGYS*QKNKLLTFLEV
Trigger: TACCTCCAGAAATGTTAACAACTTATTCTTCTGCCATGAGTACCCCTCATCAGGGTTGGTTTCAATGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAATCTTTCCTTCTAGTTaGGAAGGAGCAAGGTGTCTC +
Preference number: 3 (lower is better)
Translates to: SVSMICPAELTGSYTCKRIFPSS*EGARCL
Trigger: GAGACACCTTGCTCCTTCCAAACTAGAAGGAAAGAT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAAGCTGCTATTGTCATaGCAACAAGTCTTAACTGTA +
Preference number: 3 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTKLLLS*QQVLTV
Trigger: TACAGTTAAGACTTGTTGCAATGACAATAGCAGCTT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR TCA 72 bp TCAAGATGGATGTTTTCTGGTTTTAGAACTCTGTCTTaGTGCACAGAAAGCAAAGCATTCAGTGGGCAATGG +
Preference number: 3 (lower is better)
Translates to: SRWMFSGFRTLS*CTESKAFSGQW
Trigger: CCATTGCCCACTGAATGCTTTGCTTTCTGTGCATCAAGACAGAGTTCTAAAACCAGAAAACATCCATCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAATCTTTCCTTCTAGTTaGGAAGGAGCAAGGTGTCTC +
Preference number: 3 (lower is better)
Translates to: QESSPENSLEETNPETKKIFPSS*EGARCL
Trigger: GAGACACCTTGCTCCTTCCAAACTAGAAGGAAAGAT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCCACTTAGGACCCATTaGGCTAATACTAGAAGTAGT +
Preference number: 3 (lower is better)
Translates to: DKLKLRDILPKQLISRWSPLRTH*ANTRSS
Trigger: ACTACTTCTAGTATTAGCCAAATGGGTCCTAAGTGG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR TCA 72 bp CTGGAGAGAGAACTTGAATCATGGCATTTGTGCGTATaGAATTCAATCACATACTGGCACTCATCTAAGACT +
Preference number: 3 (lower is better)
Translates to: LERELESWHLCV*NSITYWHSSKT
Trigger: AGTCTTAGATGAGTGCCAGTATGTGATTGAATTTCATACGCACAAATGCCATGATTCAAGTTCTCTCTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR GCA 72 bp GACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTaGCTTGATCAGTCATGTAACCACTGGGTAAGAGTT +
Preference number: 3 (lower is better)
Translates to: DILPKQLISRWS*LDQSCNHWVRV
Trigger: AACTCTTACCCAGTGGTTACATGACTGATCAAGGCAACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGTACCTTATTGCACATaGATTCCCAAGAAACCCTTT +
Preference number: 3 (lower is better)
Translates to: DKLKLRDILPKQLISRWSVPYCT*IPKKPF
Trigger: AAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTAC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATGTGCTGGGAATTTTTaGCTGTTAAACACATCTGAG +
Preference number: 3 (lower is better)
Translates to: QESSPENSLEETNPETKKCAGNF*LLNTSE
Trigger: CTCAGATGTGTTTAACAGCAAAAAATTCCCAGCACA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGAATTTGGCTTTTTCTaGGACCTTTCAAGATGGATG +
Preference number: 3 (lower is better)
Translates to: QESSPENSLEETNPETKKEFGFF*DLSRWM
Trigger: CATCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGGTGCTATATGGAATTaGGCTTTTTCTTGGACCTTT +
Preference number: 3 (lower is better)
Translates to: QESSPENSLEETNPETKKGAIWN*AFSWTF
Trigger: AAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTGGGTTCTGAGGCTTTaGAACTTGAATATTTACACT +
Preference number: 3 (lower is better)
Translates to: DKLKLRDILPKQLISRWSWVLRL*NLNIYT
Trigger: AGTGTAAATATTCAAGTTCAAAAGCCTCAGAACCCA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAAGCTGCTATTGTCATaGCAACAAGTCTTAACTGTA +
Preference number: 3 (lower is better)
Translates to: QESSPENSLEETNPETKKKLLLS*QQVLTV
Trigger: TACAGTTAAGACTTGTTGCAATGACAATAGCAGCTT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTAACAGTAGTACCTTATaGCACATTGATTCCCAAGAA +
Preference number: 3 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCNSSTL*HIDSQE
Trigger: TTCTTGGGAATCAATGTGCAATAAGGTACTACTGTT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTTGGCAGAAGAATAAGTaGTTAACATTTCTGGAGGTA +
Preference number: 3 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCWQKNK*LTFLEV
Trigger: TACCTCCAGAAATGTTAACAACTTATTCTTCTGCCA...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGCCTGGCACCGCGCCTaGACACCTCCGGGGCACTCG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEAWHRA*TPPGHS
Trigger: CGAGTGCCCCGGAGGTGTCCAGGCGCGGTGCCAGGC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361686.8
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACGGGGAGGGCTCATGTaGGGCGCCCATGATGGCCCG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLERGGLM*GAHDGP
Trigger: CGGGCCATCATGGGCGCCGCACATGAGCCCTCCCCG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGCGCGGCTCCGCAGCTaGCACAGCAGCTGTGCCCTG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEARLRS*HSSCAL
Trigger: CAGGGCACAGCTGCTGTGCCAGCTGCGGAGCCGCGC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACCCATGATGGCCCGCTaGTTCCCCTGCACCGGCAGG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEPMMAR*FPCTGR
Trigger: CCTGCCGGTGCAGGGGAAGCAGCGGGCCATCATGGG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAAAAGGGCGCCTCGGTaGCGTCCAGCGTCCGCACGC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEKRAPR*RPASAR
Trigger: GCGTGCGGACGCTGGACGGCACCGAGGCGCCCTTTT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAATGCGCACAGGCTGTaGGCGGCCAGGAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLENAHRL*AARRES
Trigger: GGACTCCCTCCTGGCCGCCCACAGCCTGTGCGCATT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361686.8
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACTCCCACACTCACGCTaGCGCCCGCTAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELPHSR*RPLELG
Trigger: TCCCAGCTCTAGCGGGCGCCAGCGTGAGTGTGGGAG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGCCCGCTGCTTCCCCTaGACCGGCAGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTARCFP*TGRSLL
Trigger: CAGGAGGCTCCTGCCGGTGCAGGGGAAGCAGCGGGC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGACTGGGCCCATTTCTaGAGGTCTCCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEDWAHF*RSPGPA
Trigger: TGCGGGGCCTGGAGACCTGCAGAAATGGGCCCAGTC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACCTCCTCTGGACCTGTaGAGCCGGAAAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEPPLDL*SRKSPL
Trigger: GAGGGGGCTTTTCCGGCTGCACAGGTCCAGAGGAGG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGGTACGCCCCGAGGGTaGAGGCTGCGTCGTAGTACA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEGTPRG*RLRRST
Trigger: TGTACTACGACGCAGCCTGCACCCTCGGGGCGTACC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAAGGAACCGGCTGGGTaGGCGCGGGGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLKEPAG*ARGSAW
Trigger: CCAGGCGCTGCCCCGCGCCCACCCAGCCGGTTCCTT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACTTCTCTGCCTCCGGTaGCTCTTCTTCACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELLCLR*LFFTRL
Trigger: GAGGCGGGTGAAGAAGAGGCACCGGAGGCAGAGAAG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAACAGCAGCTGTGCCCTaGTCAGCCCGGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTTAAVP*SARPPA
Trigger: AGCGGGAGGCCGGGCTGAGCAGGGCACAGCTGCTGT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAACCTTGCCCTTGCGATaGAAATCCCCCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLETLPLR*KSPCVP
Trigger: GGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCTCCTCCTGCCACCGTaGGGTCTCGGAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLLLLPP*GLGAAP
Trigger: CGGGGCAGCTCCGAGACCCCACGGTGGCAGGAGGAG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCCCATGATGGCCCGCTaGTTCCCCTGCACCGGCAGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLPMMAR*FPCTGR
Trigger: CCTGCCGGTGCAGGGGAAGCAGCGGGCCATCATGGG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTACAGCAGCTGTGCCCTaGTCAGCCCGGCCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLTAAVP*SARPPA
Trigger: AGCGGGAGGCCGGGCTGAGCAGGGCACAGCTGCTGT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACTTGGTGCAGGGCAGTaGACCGCCTGGAAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTLGAGQ*TAWKPG
Trigger: TCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAAG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACACCGTGGTGCTCGGTaGTCCCCCTGGCAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRHRGAR*SPWQRG
Trigger: GCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCGCACGACACCGTGGTaGTCGGTGCTCCCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLRTTPW*SVLPLA
Trigger: TGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGGGCAGTGCACCGCCTaGAAGCCGGGAAGAACCACC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTGQCTA*KPGRTT
Trigger: GGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAAGCGCACGACACCGTaGTGCTCGGTGCTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTKRTTP*CSVLPL
Trigger: CAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTCTCCAGGCCCCGCATaGAAGGAACCGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLSPGPA*KEPAGW
Trigger: CCACCCAGCCGGTTCCTTTCATGCGGGGCCTGGAGA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACGGGGAGGGCTCATGTaGGGCGCCCATGATGGCCCG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRRGGLM*GAHDGP
Trigger: CGGGCCATCATGGGCGCCGCACATGAGCCCTCCCCG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATCCTTCATCGCCTTCTaGAGGCGCGGGTTCAGCATT +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLESFIAF*RRGFSI
Trigger: AATGCTGAACCCGCGCCTGCAGAAGGCGATGAAGGA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCCGTCCCAGGCGGCCTaGGGGATCACCTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSPSQAA*GITSPG
Trigger: CCCCGGAGAGGTGATCCCGCAGGCCGCCTGGGACGG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGTGGGGTCTCGGAGCTaGCCCGCGCTCCCGTCCCAG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSVGSRS*PALPSQ
Trigger: CTGGGACGGGAGCGCGGGGCAGCTCCGAGACCCCAC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCTCGAGTCCTCCTCCTaGCACCGTGGGGTCTCGGAG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLLESSS*HRGVSE
Trigger: CTCCGAGACCCCACGGTGGCAGGAGGAGGACTCGAG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGCACCCCGTGCTTGTTaGCGGTCAGGTAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEAPRAC*RSGNPS
Trigger: TGAAGGATTACCTGACCGCCAACAAGCACGGGGTGC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGCTCGGTGCTCCCCCTaGCAGCGCGGCACTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRARCSP*QRGTGV
Trigger: GACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
3UTR CAA 72 bp TCCAGGGGCACCTGCAGCCCTGTGATTCTATGTTACTaGCCAGTGATGTGCCTCCTGGTGGATGTGATACTA +
Preference number: 4 (lower is better)
Translates to: SRGTCSPVILCY*PVMCLLVDVIL
Trigger: TAGTATCACATCCACCAGGAGGCACATCACTGGCAAGTAACATAGAATCACAGGGCTGCAGGTGCCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 72 bp GCACAGGGTGATGGCTCCAAAATCTTTCCTTCTAGTTaGGAAGGAGCAAGGTGTCTCCCGTCTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AQGDGSKIFPSS*EGARCLPSSPA
Trigger: TGCTGGGGAAGACGGGAGACACCTTGCTCCTTCCAAACTAGAAGGAAAGATTTTGGAGCCATCACCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGCCCGCTGCTTCCCCTaGACCGGCAGGAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSARCFP*TGRSLL
Trigger: CAGGAGGCTCCTGCCGGTGCAGGGGAAGCAGCGGGC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACTGGCACAGCAGCTGTaGCCTGCTCAGCCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLAQQL*PAQPGL
Trigger: GAGGCCGGGCTGAGCAGGGCACAGCTGCTGTGCCAG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGGAAGAGTTGAGGATTaGGCCTGCAGACATGACGAC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEGRVED*ACRHDD
Trigger: GTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGGTACGCCCCGAGGGTaGAGGCTGCGTCGTAGTACA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLGTPRG*RLRRST
Trigger: TGTACTACGACGCAGCCTGCACCCTCGGGGCGTACC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGCTGCAGAAGGCGAGTaGGCGGCGGGAGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRAAEGE*AAGVVL
Trigger: CAGGACGACTCCCGCCGCGCACTCGCCTTCTGCAGC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAAGGAACCGGCTGGGTaGGCGCGGGGCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKKEPAG*ARGSAW
Trigger: CCAGGCGCTGCCCCGCGCCCACCCAGCCGGTTCCTT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGGAAGGCCCTGGACATaGAGGAGTACAGCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTGRPWT*RSTACR
Trigger: GCGACAGGCTGTACTCCTCCATGTCCAGGGCCTTCC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTCACGCCGCGGAACTTaGGGGCTGCAGAAGGCGAGT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLSRRGT*GLQKAS
Trigger: ACTCGCCTTCTGCAGCCCCCAAGTTCCGCGGCGTGA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATCTCCAGGCCCCGCATaGAAGGAACCGGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRSPGPA*KEPAGW
Trigger: CCACCCAGCCGGTTCCTTTCATGCGGGGCCTGGAGA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAATCCCAATGTCCCCTaGGTGTGGCTGTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTNPNVP*VWLCHP
Trigger: AGGGTGGCACAGCCACACTCAGGGGACATTGGGATT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGAACTGTCAATGAAGTaGTGGCTGGGGTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEELSMK*WLGLVR
Trigger: TCTGACCAACCCCAGCCATCACTTCATTGACAGTTC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAAGATGTGCAGAGTATaGGTGTGTGGGAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEKMCRV*VCGKRL
Trigger: CAACCGCTTCCCACACACTCATACTCTGCACATCTT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGAACCACCTTGCCCTTaGGATGCAAATCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTEPPCP*DANPPA
Trigger: CGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACTTGGTGCAGGGCAGTaGACCGCCTGGAAGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLGAGQ*TAWKPG
Trigger: TCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAAG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAATGACTGGACTTGGTaGAGGGCAGTGCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTNDWTW*RAVHRL
Trigger: CAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATCCCCAGCACAGCTGTaGCAATTGTCAAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLESPAQL*QLSSVS
Trigger: TGACACACTTGACAATTGGCACAGCTGTGCTGGGGA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATGTTCAAACCCATCTTaGGACTGGGCCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLECSNPS*DWAHFC
Trigger: GCAGAAATGGGCCCAGTCCCAAGATGGGTTTGAACA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACGTCTGCCGCACGGATaGGATATATTCATACACGTG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLERLPHG*DIFIHV
Trigger: CACGTGTATGAATATATCCCATCCGTGCGGCAGACG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGGAATGACTGGACTTaGTGCAGGGCAGTGCACCGC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTWNDWT*CRAVHR
Trigger: GCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACCTGGTGTGACTGGCTaGAGAAATAAGGTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEPGVTG*RNKVGR
Trigger: TCTCCCTACCTTATTTCTCCAGCCAGTCACACCAGG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGCGGGGCACAGCGGGTaGCTCGGCCTCAAAGCCGGC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCAGHSG*LGLKAG
Trigger: GCCGGCTTTGAGGCCGAGCCACCCGCTGTGCCCCGC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCTAGAGCTGGGACCCTaGCCGGGGTCCCCGACTCAC +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLELGP*PGSPTH
Trigger: GTGAGTCGGGGACCCCGGCCAGGGTCCCAGCTCTAG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACATGTGCGGCGCCCATaGTGGCCCGCTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKHVRRP*WPAASP
Trigger: AGGGGAAGCAGCGGGCCATCATGGGCGCCGCACATG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAATCCCAATGTCCCCTaGGTGTGGCTGTGCCACCCT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLNPNVP*VWLCHP
Trigger: AGGGTGGCACAGCCACACTCAGGGGACATTGGGATT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACTCAAAACCGCATCATaGGAATCTATTTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELKTAS*ESISSP
Trigger: GGGCGAGGAAATAGATTCTCATGATGCGGTTTTGAG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATATGGCTACAATGACTaGGGACTACTGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEYGYND*GLLESP
Trigger: TGGACTCTCCAGTAGTCCTCAGTCATTGTAGCCATA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGGCACAGCTCCGTCTaGCGCACGGATGGGATATAT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTWHSSV*RTDGIY
Trigger: ATATATCCCATCCGTGCGGCAGACGGAGCTGTGCCA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACGGGAAGAACCACCTTaGCCTTGCGATGCAAATCCC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTREEPP*PCDANP
Trigger: GGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAATGACTGGACTTGGTaGAGGGCAGTGCACCGCCTG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLNDWTW*RAVHRL
Trigger: CAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATGTTTCTCGAAGCTCTaGCTTCAGGCAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLECFSKL*LQADKE
Trigger: TTCCTTGTCTGCCTGAAGGCAGAGCTTCGAGAAACA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGCGGAACTTGGGGGCTaGAGAAGGCGAGTGCGCGGC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKAELGG*RRRVRG
Trigger: GCCGCGCACTCGCCTTCTGCAGCCCCCAAGTTCCGC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAATGAAAGGAACCGGCTaGGTGGGCGCGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKMKGTG*VGAGQR
Trigger: GCGCTGCCCCGCGCCCACCCAGCCGGTTCCTTTCAT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTTCACCCGCCTCCTCTaGACCTGTGCAGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLFTRLL*TCAAGK
Trigger: TTTTCCGGCTGCACAGGTCCAGAGGAGGCGGGTGAA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACCCTCCTCCAACACGTaGCTCCTTCTCTGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRPSSNT*LLLCLR
Trigger: CCGGAGGCAGAGAAGGAGCCACGTGTTGGAGGAGGG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAAGATTTGCGGAATATaGGGCAGGGTCCCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTKICGI*GRVPGH
Trigger: GTGGCCTGGGACCCTGCCCCATATTCCGCAAATCTT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGGTTACCCGTCTGCCTaGTGTGACTGGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTGYPSA*CDWLEK
Trigger: TTTCTCCAGCCAGTCACACCAGGCAGACGGGTAACC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACAGAGTATGAGTGTGTaGGAAGCGGTTGGCGGAGGA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTQSMSV*EAVGGG
Trigger: TCCTCCGCCAACCGCTTCCCACACACTCATACTCTG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCTGGCAGCGCGGCACTaGAGTCCAAGGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLAARH*SPRRAC
Trigger: ACACGCACGCCTTGGACTCCAGTGCCGCGCTGCCAG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCATGTGCGGCGCCCATaGTGGCCCGCTGCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCHVRRP*WPAASP
Trigger: AGGGGAAGCAGCGGGCCATCATGGGCGCCGCACATG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTTGCGCCTGCAGACATaGCGACAGCGCAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLRLQT*RQRSCA
Trigger: TGCGCAGCTGCGCTGTCGTCATGTCTGCAGGCGCAA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGAAATTAGAAAGGAATaGCCGGGCGCGGTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLEIRKE*PGAVVA
Trigger: AGCCACCACCGCGCCCGGTCATTCCTTTCTAATTTC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACATGCAACTTTTAATTaGCCATCCCTTGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEHATFN*PSLGPE
Trigger: CTCAGGACCAAGGGATGGTCAATTAAAAGTTGCATG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATTGCCCATCCAAGCCTaGTGCTTACATGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELPIQA*CLHATF
Trigger: AAAAGTTGCATGTAAGCATCAGGCTTGGATGGGCAA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATTCATGGCAGGTCTCTaGGGTCAGCACCTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTFMAGL*GQHLVS
Trigger: AGACACAAGGTGCTGACCGCAGAGACCTGCCATGAA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACTTCTCTGCCTCCGGTaGCTCTTCTTCACCCGCCTC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLLCLR*LFFTRL
Trigger: GAGGCGGGTGAAGAAGAGGCACCGGAGGCAGAGAAG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGTTGAGGATTGCGCCTaGAGACATGACGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLVEDCA*RHDDSA
Trigger: TGCGCTGTCGTCATGTCTGCAGGCGCAATCCTCAAC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCCCGAGGGTGCAGGCTaGGTCGTAGTACAGCTCGTG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSPEGAG*VVVQLV
Trigger: CACGAGCTGTACTACGACGCAGCCTGCACCCTCGGG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGCAAATCCCCCTGCGTaGCCATGTTCAGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRANPPA*PCSGAA
Trigger: TGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCGGGAAGAACCACCTTaGCCTTGCGATGCAAATCCC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLREEPP*PCDANP
Trigger: GGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGTGTCCAGGGGCACCTaGAGCCCTGTGATTCTATGT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLVSRGT*SPVILC
Trigger: ACATAGAATCACAGGGCTGCAGGTGCCCCTGGACAC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACAGGAGATGTGTTACTaGTCAGAAGAGTCAATCAGC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEQEMCY*SEESIS
Trigger: GCTGATTGACTCTTCTGAGCAGTAACACATCTCCTG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATGCACAGTACCCGCCTaGCACCGCGCCTGGACACCT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKCTVPA*HRAWTP
Trigger: AGGTGTCCAGGCGCGGTGCCAGGCGGGTACTGTGCA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361686.8
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTATGAAAGGAACCGGCTaGGTGGGCGCGGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCMKGTG*VGAGQR
Trigger: GCGCTGCCCCGCGCCCACCCAGCCGGTTCCTTTCAT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGGAAGGCCCTGGACATaGAGGAGTACAGCCTGTCGC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRGRPWT*RSTACR
Trigger: GCGACAGGCTGTACTCCTCCATGTCCAGGGCCTTCC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGCGGGTTCAGCATTTTaGAAGAGACGTTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTAGSAF*KRRSPS
Trigger: GGAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGGGCAGTGCACCGCCTaGAAGCCGGGAAGAACCACC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKGQCTA*KPGRTT
Trigger: GGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATACTTGGAAGCTACCTaGCCAATAGGTTCACTCATG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEYLEAT*PIGSLM
Trigger: CATGAGTGAACCTATTGGCCAGGTAGCTTCCAAGTA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACGCCCAAGGAAGAGTTaGGGATTGCGCCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRRPRKS*GLRLQT
Trigger: TGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAGGCAGAGCTGGCAGTaGACCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRRQSWQ*TKIAPL
Trigger: CAGTGGTGCGATCTTGGTTCACTGCCAGCTCTGCCT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGGGCGGCGGCAGGAATaGAGGAATGCGCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCGRRQE*RNAHRL
Trigger: CAGCCTGTGCGCATTCCTGCATTCCTGCCGCCGCCC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361686.8
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGACTGGGCCCATTTCTaGAGGTCTCCAGGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKDWAHF*RSPGPA
Trigger: TGCGGGGCCTGGAGACCTGCAGAAATGGGCCCAGTC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGGAAGAGTTGAGGATTaGGCCTGCAGACATGACGAC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLGRVED*ACRHDD
Trigger: GTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGGGTTGGTCAGAATCTaGGAATTAATGATGCGTATG +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEGLVRI*ELMMRM
Trigger: CATACGCATCATTAATTCGCAGATTCTGACCAACCC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAATATATTCATACACGTaGACCTCTCTGCACATGGAC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEIYSYT*TSLHMD
Trigger: GTCCATGTGCAGAGAGGTGCACGTGTATGAATATAT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATCCCCAGCACAGCTGTaGCAATTGTCAAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTSPAQL*QLSSVS
Trigger: TGACACACTTGACAATTGGCACAGCTGTGCTGGGGA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACAGACACATGGGAAGTaGTGTTTCTCGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTQTHGK*CFSKLC
Trigger: GCAGAGCTTCGAGAAACAGCACTTCCCATGTGTCTG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCGCTCAGCCCCGCGCTaGACGCCTCATTGTTTCGGG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCRSAPR*TPHCFG
Trigger: CCCGAAACAATGAGGCGTGCAGCGCGGGGCTGAGCG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGTTCAAACCCATCTTaGGACTGGGCCCATTTCTGC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTCSNPS*DWAHFC
Trigger: GCAGAAATGGGCCCAGTCCCAAGATGGGTTTGAACA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATTCACCCGCCTCCTCTaGACCTGTGCAGCCGGAAAA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRFTRLL*TCAAGK
Trigger: TTTTCCGGCTGCACAGGTCCAGAGGAGGCGGGTGAA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACCCTCCTCCAACACGTaGCTCCTTCTCTGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKPSSNT*LLLCLR
Trigger: CCGGAGGCAGAGAAGGAGCCACGTGTTGGAGGAGGG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATCTTTAGTGTTCTCCTaGATAATATCCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLESLVFS*IISQSC
Trigger: GCAGCTCTGGGATATTATCCAGGAGAACACTAAAGA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGAACTGTCAATGAAGTaGTGGCTGGGGTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLELSMK*WLGLVR
Trigger: TCTGACCAACCCCAGCCATCACTTCATTGACAGTTC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTACAGTGAACTGTCAATaGAGTGATGGCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLTVNCQ*SDGWGW
Trigger: CCAACCCCAGCCATCACTTCATTGACAGTTCACTGT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCCCGTCTGCCTGGTGTaGCTGGCTGGAGAAATAAGG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSPVCLV*LAGEIR
Trigger: CCTTATTTCTCCAGCCAGTCACACCAGGCAGACGGG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGGAGAGTCCAGGATTaGTTAAGTGTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTWRVQD*LSVWLR
Trigger: TCTCAGCCAGACACTTAATCAATCCTGGACTCTCCA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATATGGCTACAATGACTaGGGACTACTGGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTYGYND*GLLESP
Trigger: TGGACTCTCCAGTAGTCCTCAGTCATTGTAGCCATA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAATTCAACCAAGTAACTaGCCACATGTACTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEIQPSN*PHVLCV
Trigger: AACACACAGTACATGTGGTCAGTTACTTGGTTGAAT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCCTCCTCTGGACCTGTaGAGCCGGAAAAGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCPPLDL*SRKSPL
Trigger: GAGGGGGCTTTTCCGGCTGCACAGGTCCAGAGGAGG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGTTGAGGATTGCGCCTaGAGACATGACGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRVEDCA*RHDDSA
Trigger: TGCGCTGTCGTCATGTCTGCAGGCGCAATCCTCAAC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGGGCCTCCTCTGTGGTaGTATATGGAATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTGPPLW*YMEFGF
Trigger: AAAGCCAAATTCCATATAGCACCACAGAGGAGGCCC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAATTTCCAGATGGAGTTaGCTTGATCAGTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEISRWS*LDQSCN
Trigger: GTTACATGACTGATCAAGGCAACTCCATCTGGAAAT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAGATGGGTGGCAGAATaGACCTGCACAGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKRWVAE*TCTVPA
Trigger: GGCGGGTACTGTGCAGGTTCATTCTGCCACCCATCT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361686.8
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACGCCCAAGGAAGAGTTaGGGATTGCGCCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKRPRKS*GLRLQT
Trigger: TGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCTCAAAACCGCATCATaGGAATCTATTTCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLLKTAS*ESISSP
Trigger: GGGCGAGGAAATAGATTCTCATGATGCGGTTTTGAG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCCCAGGCCACCAAAATaGCGTCTTTATACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLPRPPK*RLYTVN
Trigger: GTTCACTGTATAAAGACGTCATTTTGGTGGCCTGGG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATACCTTATTGCACATTaGTTCCCAAGAAACCCTTTT +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEYLIAH*FPRNPF
Trigger: AAAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGCACCTGCAGCCCTGTaGTTCTATGTTACTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRAPAAL*FYVTCQ
Trigger: CTGGCAAGTAACATAGAATCACAGGGCTGCAGGTGC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTGTCAAGTGTGTCACTaGCTATGCAAAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLCQVCH*LCKSCR
Trigger: CCTGCAGCTTTTGCATAGTCAGTGACACACTTGACA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAGCTGCCTTTCCCTCTaGAGCATCTACATATTTTCC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTSCLSL*SIYIFS
Trigger: GGAAAATATGTAGATGCTTCAGAGGGAAAGGCAGCT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACCTATCCCTTCTCATTaGCTTAATAACAAAACTCTC +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEPIPSH*LNNKTL
Trigger: GAGAGTTTTGTTATTAAGTCAATGAGAAGGGATAGG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAGGCAGAGCTGGCAGTaGACCAAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKRQSWQ*TKIAPL
Trigger: CAGTGGTGCGATCTTGGTTCACTGCCAGCTCTGCCT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGAATCTAGATATGGTTaGATTGTCATTGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEESRYG*IVIAAQ
Trigger: TTGAGCAGCAATGACAATTCAACCATATCTAGATTC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGCAAATCCCCCTGCGTaGCCATGTTCAGGCGCTGCA +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCANPPA*PCSGAA
Trigger: TGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTACCTTGCCCTTGCGATaGAAATCCCCCTGCGTGCCC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCTLPLR*KSPCVP
Trigger: GGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTCCTGGTTGAAATACTaGAGGGAAACAAAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLSWLKY*RETKGL
Trigger: GAGGCCCTTTGTTTCCCTGCAGTATTTCAACCAGGA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTACTTGCCAGTGATGTaGCTCCTGGTGGATGTGATA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLYLPVM*LLVDVI
Trigger: TATCACATCCACCAGGAGGCACATCACTGGCAAGTA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTGTCTGGCAAAATGCTaGCACTTAGGACCCATTTGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLCLAKC*HLGPIW
Trigger: CCAAATGGGTCCTAAGTGGCAGCATTTTGCCAGACA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCCATTGCTTCAAGTGTaGTTTCATGGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLPLLQV*FHGRSL
Trigger: CAGAGACCTGCCATGAAACCACACTTGAAGCAATGG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAACCCATCTTGGGACTaGGCCCATTTCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRNPSWD*AHFCRS
Trigger: AGACCTGCAGAAATGGGCCCAGTCCCAAGATGGGTT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGGTACAGGAAGGCCCTaGACATGGAGGAGTACAGCC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKGTGRP*TWRSTA
Trigger: GGCTGTACTCCTCCATGTCCAGGGCCTTCCTGTACC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGCACCCCGTGCTTGTTaGCGGTCAGGTAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSAPRAC*RSGNPS
Trigger: TGAAGGATTACCTGACCGCCAACAAGCACGGGGTGC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATGGAATGACTGGACTTaGTGCAGGGCAGTGCACCGC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKWNDWT*CRAVHR
Trigger: GCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGGTTACCCGTCTGCCTaGTGTGACTGGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSGYPSA*CDWLEK
Trigger: TTTCTCCAGCCAGTCACACCAGGCAGACGGGTAACC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATACTTGGAAGCTACCTaGCCAATAGGTTCACTCATG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTYLEAT*PIGSLM
Trigger: CATGAGTGAACCTATTGGCCAGGTAGCTTCCAAGTA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 72 bp ACTTCATATGGTCAGGAACATCACCAAAACCTGTCATaGAAACCAACCCTGATGAGGGGTACTCATGGCAGA +
Preference number: 4 (lower is better)
Translates to: TSYGQEHHQNLS*KPTLMRGTHGR
Trigger: TCTGCCATGAGTACCCCTCATCAGGGTTGGTTTCAATGACAGGTTTTGGTGATGTTCCTGACCATATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACCTAGAAGCACAGGGTaGTGGCTCCAAAATCTTTCC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRPRSTG*WLQNLS
Trigger: GGAAAGATTTTGGAGCCATCACCCTGTGCTTCTAGG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAGCTGCCTTTCCCTCTaGAGCATCTACATATTTTCC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLSCLSL*SIYIFS
Trigger: GGAAAATATGTAGATGCTTCAGAGGGAAAGGCAGCT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTACTGGAGAGAGAACTTaGATCATGGCATTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLTGERT*IMAFVR
Trigger: ACGCACAAATGCCATGATTCAAGTTCTCTCTCCAGT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGAACCACCTTGCCCTTaGGATGCAAATCCCCCTGCG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCEPPCP*DANPPA
Trigger: CGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCAATGTCTGGCAAAATaGTGCCACTTAGGACCCATT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLQCLAK*CHLGPI
Trigger: AATGGGTCCTAAGTGGCAGCATTTTGCCAGACATTG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAATAAAAGCCCTCCCTTaGCCATCCAAGCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRIKALP*PSKPDA
Trigger: AGCATCAGGCTTGGATGGGCAAGGGAGGGCTTTTAT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACTGGAGTCCAAGGCGTaGGTGTCACATTTTATTCCC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLESKA*VSHFIP
Trigger: GGGAATAAAATGTGACACGCACGCCTTGGACTCCAG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATCTTTAGTGTTCTCCTaGATAATATCCCAGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTSLVFS*IISQSC
Trigger: GCAGCTCTGGGATATTATCCAGGAGAACACTAAAGA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGCTGAGGCAGGAGAATaGTGTGAACGTGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCAEAGE*CERGRQ
Trigger: CTGCCTCCCACGTTCACACCATTCTCCTGCCTCAGC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACCTGGTGTGACTGGCTaGAGAAATAAGGTAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRPGVTG*RNKVGR
Trigger: TCTCCCTACCTTATTTCTCCAGCCAGTCACACCAGG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 72 bp CCTGATGCTTACATGCAACTTTTAATTGACCATCCCTaGGTCCTGAGCACAAAGTTCTCTGTAAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PDAYMQLLIDHP*VLSTKFSVRAA
Trigger: AGCTGCTCTTACAGAGAACTTTGTGCTCAGGACCAAGGGATGGTCAATTAAAAGTTGCATGTAAGCATCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTACAGTGAACTGTCAATaGAGTGATGGCTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSTVNCQ*SDGWGW
Trigger: CCAACCCCAGCCATCACTTCATTGACAGTTCACTGT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAAGATGTGCAGAGTATaGGTGTGTGGGAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSKMCRV*VCGKRL
Trigger: CAACCGCTTCCCACACACTCATACTCTGCACATCTT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATTCATGGCAGGTCTCTaGGGTCAGCACCTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKFMAGL*GQHLVS
Trigger: AGACACAAGGTGCTGACCGCAGAGACCTGCCATGAA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAATTCGTTGTCTCCATTaGTTCAAGTGTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTIRCLH*FKCGFM
Trigger: CATGAAACCACACTTGAAGCAATGGAGACAACGAAT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGTGTCCAGGGGCACCTaGAGCCCTGTGATTCTATGT +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCVSRGT*SPVILC
Trigger: ACATAGAATCACAGGGCTGCAGGTGCCCCTGGACAC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACCATTGCTTCAAGTGTaGTTTCATGGCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRPLLQV*FHGRSL
Trigger: CAGAGACCTGCCATGAAACCACACTTGAAGCAATGG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAACCCATCTTGGGACTaGGCCCATTTCTGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKNPSWD*AHFCRS
Trigger: AGACCTGCAGAAATGGGCCCAGTCCCAAGATGGGTT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGTAAAATGGCTGATTTaGGTTTCTCTGACGATGCTG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLVKWLI*VSLTML
Trigger: CAGCATCGTCAGAGAAACCCAAATCAGCCATTTTAC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGATGAGGGGTACTCATaGCAGAAGAATAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTDEGYS*QKNKLL
Trigger: TAACAACTTATTCTTCTGCCATGAGTACCCCTCATC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAAGCAAAGCATTCAGTaGGCAATGGGAGGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRKQSIQ*AMGGRD
Trigger: ATCTCTGCCTCCCATTGCCCACTGAATGCTTTGCTT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAAAGGGCCTCCTCTGTaGTGCTATATGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRKGPPL*CYMEFG
Trigger: GCCAAATTCCATATAGCACCACAGAGGAGGCCCTTT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGGAAGAGACAGAACCTaGGAGAAATTCAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRGRDRT*EKFSEL
Trigger: CAGCTCACTGAATTTCTCCCAGGTTCTGTCTCTTCC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGAAAGGTCAGCTCCCTaGGACGAGCATCGGTATTCC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCERSAP*DEHRYS
Trigger: GGAATACCGATGCTCGTCCCAGGGAGCTGACCTTTC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGACGTCTTTATACAGTaGACTGTCAATGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLDVFIQ*TVNEVM
Trigger: CATCACTTCATTGACAGTTCACTGTATAAAGACGTC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAGAGAAGGATTATCATaGCCACCACTAAATTACTGT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTREGLS*PPLNYC
Trigger: ACAGTAATTTAGTGGTGGTCATGATAATCCTTCTCT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTTTAGAACTCTGTCTTaGTGCACAGAAAGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLFRTLS*CTESKA
Trigger: TGCTTTGCTTTCTGTGCATCAAGACAGAGTTCTAAA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACTGTTGAACAGAGCCTaGTTCCCAAGAGTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLLNRA*FPRVFK
Trigger: CTTAAAGACTCTTGGGAATCAGGCTCTGTTCAACAG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGAATCTAGATATGGTTaGATTGTCATTGCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTESRYG*IVIAAQ
Trigger: TTGAGCAGCAATGACAATTCAACCATATCTAGATTC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTGGAGAGTCCAGGATTaGTTAAGTGTCTGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSWRVQD*LSVWLR
Trigger: TCTCAGCCAGACACTTAATCAATCCTGGACTCTCCA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAGTGACCCAGCTACTTTaGTTTCCTAATTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTVTQLL*FPNFEN
Trigger: GTTTTCAAAATTAGGAAATCAAAGTAGCTGGGTCAC...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTGGCATTTGTGCGTATaGAATTCAATCACATACTGG +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLWHLCV*NSITYW
Trigger: CCAGTATGTGATTGAATTTCATACGCACAAATGCCA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAAGCTATCCTTGGTTTTaGATCTTTCTTGAGCCTTAT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTSYPWF*IFLEPY
Trigger: ATAAGGCTCAAGAAAGATGCAAAACCAAGGATAGCT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAACGATGCTGAATATATaGAGTGAACAGGTTGTAATC +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTTMLNI*SEQVVI
Trigger: GATTACAACCTGTTCACTCCATATATTCAGCATCGT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTAGAGTGTGGAATGACTaGACTTGGTGCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCRVWND*TWCRAV
Trigger: CACTGCCCTGCACCAAGTCCAGTCATTCCACACTCT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACCCTTTTTAAGAGTGTaGAATGACTGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRPFLRV*NDWTWC
Trigger: GCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAAAGGGCCTCCTCTGTaGTGCTATATGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSKGPPL*CYMEFG
Trigger: GCCAAATTCCATATAGCACCACAGAGGAGGCCCTTT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAGAGGACCAGACACATaGGAAGTGCTGTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSRGPDT*EVLFLE
Trigger: TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACAGTCATGTAACCACTaGGTAAGAGTTCTAAACTAT +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTQSCNH*VRVLNY
Trigger: ATAGTTTAGAACTCTTACCCAGTGGTTACATGACTG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCTTAATGCAGATGGGTaGCAGAATGAACCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLNADG*QNEPAF
Trigger: GAAGGCTGGTTCATTCTGCCACCCATCTGCATTAAG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
3UTR CAA 72 bp GAAACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTaGGCTTTTTCTTGGACCTTTCAAGATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: ETKGLLCGAIWN*AFSWTFQDGCF
Trigger: AAAACATCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATGTCAAGTGTGTCACTaGCTATGCAAAAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKCQVCH*LCKSCR
Trigger: CCTGCAGCTTTTGCATAGTCAGTGACACACTTGACA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCTGTTGAACAGAGCCTaGTTCCCAAGAGTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLLNRA*FPRVFK
Trigger: CTTAAAGACTCTTGGGAATCAGGCTCTGTTCAACAG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTTGCCCATCCAAGCCTaGTGCTTACATGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLPIQA*CLHATF
Trigger: AAAAGTTGCATGTAAGCATCAGGCTTGGATGGGCAA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAATGCTATGGCTACAATaGCTGAGGACTACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKMLWLQ*LRTTGE
Trigger: CTCTCCAGTAGTCCTCAGTCATTGTAGCCATAGCAT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGTGACCCAGCTACTTTaGTTTCCTAATTTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLVTQLL*FPNFEN
Trigger: GTTTTCAAAATTAGGAAATCAAAGTAGCTGGGTCAC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGGGCCTCCTCTGTGGTaGTATATGGAATTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKGPPLW*YMEFGF
Trigger: AAAGCCAAATTCCATATAGCACCACAGAGGAGGCCC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATGTCTGGCAAAATGCTaGCACTTAGGACCCATTTGG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKCLAKC*HLGPIW
Trigger: CCAAATGGGTCCTAAGTGGCAGCATTTTGCCAGACA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCAATGTCTGGCAAAATaGTGCCACTTAGGACCCATT +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSQCLAK*CHLGPI
Trigger: AATGGGTCCTAAGTGGCAGCATTTTGCCAGACATTG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCAGACACATGGGAAGTaGTGTTTCTCGAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCQTHGK*CFSKLC
Trigger: GCAGAGCTTCGAGAAACAGCACTTCCCATGTGTCTG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAATGAAGAATGTAAAATaGCTGATTTGGGTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTMKNVK*LIWVSL
Trigger: CAGAGAAACCCAAATCAGCCATTTTACATTCTTCAT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCGTCTGCCGCACGGATaGGATATATTCATACACGTG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCRLPHG*DIFIHV
Trigger: CACGTGTATGAATATATCCCATCCGTGCGGCAGACG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAATAAACCACTTCATATaGTCAGGAACATCACCAAAA +
Preference number: 4 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTINHFI*SGTSPK
Trigger: TTTTGGTGATGTTCCTGACCATATGAAGTGGTTTAT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACAAGGGGGATTATGCTaGATAGTAAGGATGTCTACA +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRQGGLC*IVRMST
Trigger: TGTAGACATCCTTACTATCCAGCATAATCCCCCTTG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCAATTAATTTCCAGATaGAGTTGCCTTGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLQLISR*SCLDQS
Trigger: TGACTGATCAAGGCAACTCCATCTGGAAATTAATTG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCCCAGGCCACCAAAATaGCGTCTTTATACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCPRPPK*RLYTVN
Trigger: GTTCACTGTATAAAGACGTCATTTTGGTGGCCTGGG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACATGCAACTTTTAATTaGCCATCCCTTGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKHATFN*PSLGPE
Trigger: CTCAGGACCAAGGGATGGTCAATTAAAAGTTGCATG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTATGCTATGGCTACAATaGCTGAGGACTACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCMLWLQ*LRTTGE
Trigger: CTCTCCAGTAGTCCTCAGTCATTGTAGCCATAGCAT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATGGCATTTGTGCGTATaGAATTCAATCACATACTGG +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRWHLCV*NSITYW
Trigger: CCAGTATGTGATTGAATTTCATACGCACAAATGCCA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAATTCAACCAAGTAACTaGCCACATGTACTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRIQPSN*PHVLCV
Trigger: AACACACAGTACATGTGGTCAGTTACTTGGTTGAAT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTACAGTAGTACCTTATTaGACATTGATTCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLTVVPY*TLIPKK
Trigger: TTTCTTGGGAATCAATGTGCAATAAGGTACTACTGT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTTACTTGCCAGTGATGTaGCTCCTGGTGGATGTGATA +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCYLPVM*LLVDVI
Trigger: TATCACATCCACCAGGAGGCACATCACTGGCAAGTA...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTATAAACCACTTCATATaGTCAGGAACATCACCAAAA +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLINHFI*SGTSPK
Trigger: TTTTGGTGATGTTCCTGACCATATGAAGTGGTTTAT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAAATCTTTAAAGTGTTaGGTTCTGAGGCTTTTGAAC +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLKSLKC*VLRLLN
Trigger: GTTCAAAAGCCTCAGAACCCAACACTTTAAAGATTT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGGAAGAGACAGAACCTaGGAGAAATTCAGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCGRDRT*EKFSEL
Trigger: CAGCTCACTGAATTTCTCCCAGGTTCTGTCTCTTCC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAATTCAATCACATACTaGCACTCATCTAAGACTGAT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLNSITY*HSSKTD
Trigger: ATCAGTCTTAGATGAGTGCCAGTATGTGATTGAATT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTTCACTGGTTTCCACTaGAAGAATTGTCTAAGTATT +
Preference number: 4 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLFTGFH*KNCLSI
Trigger: AATACTTAGACAATTCTTCCAGTGGAAACCAGTGAA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 72 bp TCAATGTCTGGCAAAATGCTGCCACTTAGGACCCATTaGGCTAATACTAGAAGTAGTCATCAAGTTAACTGT +
Preference number: 4 (lower is better)
Translates to: SMSGKMLPLRTH*ANTRSSHQVNC
Trigger: ACAGTTAACTTGATGACTACTTCTAGTATTAGCCAAATGGGTCCTAAGTGGCAGCATTTTGCCAGACATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGATGGTGGGTTTGGTTaGATCTTCTCTTTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKDGGFG*IFSLVF
Trigger: GAACACTAAAGAGAAGATTCAACCAAACCCACCATC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTACTAATGTTCCTGGTTaGAATACTGCAGGGAAACAA +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSTNVPG*NTAGKQ
Trigger: TTGTTTCCCTGCAGTATTTCAACCAGGAACATTAGT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGCTAACATATTGGGATaGAAATTTCCCTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKANILG*KFPSSC
Trigger: GCAGCTAGAGGGAAATTTTCATCCCAATATGTTAGC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAACACATGTAAGAGAGTaGCCCAGCTACTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKTHVRE*PSYFDF
Trigger: GAAATCAAAGTAGCTGGGTCACTCTCTTACATGTGT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTACTGGAGAGAGAACTTaGATCATGGCATTTGTGCGT +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCTGERT*IMAFVR
Trigger: ACGCACAAATGCCATGATTCAAGTTCTCTCTCCAGT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAATATATTCATACACGTaGACCTCTCTGCACATGGAC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKIYSYT*TSLHMD
Trigger: GTCCATGTGCAGAGAGGTGCACGTGTATGAATATAT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAGAAATTCAGTGAGCTaGCACTTACTGTTAACTACT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRRNSVS*HLLLTT
Trigger: AGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAACGATGCTGAATATATaGAGTGAACAGGTTGTAATC +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRTMLNI*SEQVVI
Trigger: GATTACAACCTGTTCACTCCATATATTCAGCATCGT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCCCTTTTTAAGAGTGTaGAATGACTGGACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCPFLRV*NDWTWC
Trigger: GCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGATGGTGGGTTTGGTTaGATCTTCTCTTTAGTGTTC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCDGGFG*IFSLVF
Trigger: GAACACTAAAGAGAAGATTCAACCAAACCCACCATC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGAATGCATGTATAACTaGCACACTCGATGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKECMYN*HTRCCK
Trigger: TTTACAGCATCGAGTGTGTCAGTTATACATGCATTC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGCTAACATATTGGGATaGAAATTTCCCTCTAGCTGC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCANILG*KFPSSC
Trigger: GCAGCTAGAGGGAAATTTTCATCCCAATATGTTAGC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCCTATCCCTTCTCATTaGCTTAATAACAAAACTCTC +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSPIPSH*LNNKTL
Trigger: GAGAGTTTTGTTATTAAGTCAATGAGAAGGGATAGG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTACACATGTAAGAGAGTaGCCCAGCTACTTTGATTTC +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCTHVRE*PSYFDF
Trigger: GAAATCAAAGTAGCTGGGTCACTCTCTTACATGTGT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAATTCGTTGTCTCCATTaGTTCAAGTGTGGTTTCATG +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKIRCLH*FKCGFM
Trigger: CATGAAACCACACTTGAAGCAATGGAGACAACGAAT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGGGTTGGTCAGAATCTaGGAATTAATGATGCGTATG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCGLVRI*ELMMRM
Trigger: CATACGCATCATTAATTCGCAGATTCTGACCAACCC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAATTTCCAGATGGAGTTaGCTTGATCAGTCATGTAAC +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKISRWS*LDQSCN
Trigger: GTTACATGACTGATCAAGGCAACTCCATCTGGAAAT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGTAAAATGGCTGATTTaGGTTTCTCTGACGATGCTG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCVKWLI*VSLTML
Trigger: CAGCATCGTCAGAGAAACCCAAATCAGCCATTTTAC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAGAAGATGGTGGGTTTaGTTGAATCTTCTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSRRWWV*LNLLFS
Trigger: ACTAAAGAGAAGATTCAACCAAACCCACCATCTTCT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAAATTCAATCACATACTaGCACTCATCTAAGACTGAT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRNSITY*HSSKTD
Trigger: ATCAGTCTTAGATGAGTGCCAGTATGTGATTGAATT...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATTCACTGGTTTCCACTaGAAGAATTGTCTAAGTATT +
Preference number: 4 (lower is better)
Translates to: SVSMICPAELTGSYTCKRFTGFH*KNCLSI
Trigger: AATACTTAGACAATTCTTCCAGTGGAAACCAGTGAA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 72 bp ATTTTGCAAGGGAGAACGCATTTAATTAAGCTGCTATaGTCATTGCAACAAGTCTTAACTGTACCATGGAGA +
Preference number: 4 (lower is better)
Translates to: ILQGRTHLIKLL*SLQQVLTVPWR
Trigger: TCTCCATGGTACAGTTAAGACTTGTTGCAATGACAATAGCAGCTTAATTAAATGCGTTCTCCCTTGCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
3UTR CAA 72 bp TATCAGAATCAAAACAGACAATACAATAGAACATACTaGGAAGCTACCTGGCCAATAGGTTCACTCATGTCT +
Preference number: 4 (lower is better)
Translates to: YQNQNRQYNRTY*EATWPIGSLMS
Trigger: AGACATGAGTGAACCTATTGGCCAGGTAGCTTCCAAGTATGTTCTATTGTATTGTCTGTTTTGATTCTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGACGTCTTTATACAGTaGACTGTCAATGAAGTGATG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCDVFIQ*TVNEVM
Trigger: CATCACTTCATTGACAGTTCACTGTATAAAGACGTC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAGAGAAGGATTATCATaGCCACCACTAAATTACTGT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKREGLS*PPLNYC
Trigger: ACAGTAATTTAGTGGTGGTCATGATAATCCTTCTCT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR TCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTACATTTATTGACTGTTaGACAGAGCCTGATTCCCAA +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCTFIDC*TEPDSQ
Trigger: TTGGGAATCAGGCTCTGTTCAACAGTCAATAAATGT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR GCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAGAAATTCAGTGAGCTaGCACTTACTGTTAACTACT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKRNSVS*HLLLTT
Trigger: AGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAGAGGTATCATACCCATaGTCATACATGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QESSPENSLEETNPETKKEVSYP*SYMCFL
Trigger: AAGAAAACACATGTATGACCATGGGTATGATACCTC...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCTCTGTGGTGCTATATaGAATTTGGCTTTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCLCGAI*NLAFSW
Trigger: CCAAGAAAAAGCCAAATTCCATATAGCACCACAGAG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTAAATCTTTAAAGTGTTaGGTTCTGAGGCTTTTGAAC +
Preference number: 4 (lower is better)
Translates to: DKLKLRDILPKQLISRWSKSLKC*VLRLLN
Trigger: GTTCAAAAGCCTCAGAACCCAACACTTTAAAGATTT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTAATGAAACCAGAAGATaGTGGGTTTGGTTGAATCTT +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCNETRR*WVWLNL
Trigger: AAGATTCAACCAAACCCACCATCTTCTGGTTTCATT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGAGGTATCATACCCATaGTCATACATGTGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCEVSYP*SYMCFL
Trigger: AAGAAAACACATGTATGACCATGGGTATGATACCTC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CCA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCAATTAATTTCCAGATaGAGTTGCCTTGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCQLISR*SCLDQS
Trigger: TGACTGATCAAGGCAACTCCATCTGGAAATTAATTG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS GCA 90 bp CGGGCACCAGGCGCCGCCAGCCCAGCGCAGAAAAGGGCGCCTCGGTaGCGTCCAGCGTCCGCACGCGCGCGCGGCTCCGCAGCTGGCACA +
Preference number: 5 (lower is better)
Translates to: RAPGAASPAQKRAPR*RPASARARGSAAGT
Trigger: TGTGCCAGCTGCGGAGCCGCGCGCGCGTGCGGACGCTGGACGGCACCGAGGCGCCCTTTTCTGCGCTGGGCTGGCGGCGCCTGGTGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 90 bp GCGCCTGCAGACATGACGACAGCGCAGCTGCGCAGGCCGCGGGGGTaGAGCTGGCTCAGGGGCACGGCGGGCACCAGGCGCCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: APADMTTAQLRRPRG*SWLRGTAGTRRRQP
Trigger: GGGCTGGCGGCGCCTGGTGCCCGCCGTGCCCCTGAGCCAGCTGCACCCCCGCGGCCTGCGCAGCTGCGCTGTCGTCATGTCTGCAGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 90 bp GCAGACATGACGACAGCGCAGCTGCGCAGGCCGCGGGGGTGCAGCTaGCTCAGGGGCACGGCGGGCACCAGGCGCCGCCAGCCCAGCGCA +
Preference number: 5 (lower is better)
Translates to: ADMTTAQLRRPRGCS*LRGTAGTRRRQPSA
Trigger: TGCGCTGGGCTGGCGGCGCCTGGTGCCCGCCGTGCCCCTGAGCCAGCTGCACCCCCGCGGCCTGCGCAGCTGCGCTGTCGTCATGTCTGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 90 bp CGGCAGCCGCTCGGGTGCGCGCGCTACGCGCTCCCACACTCACGCTaGCGCCCGCTAGAGCTGGGACCCTGGCCGGGGTCCCCGACTCAC +
Preference number: 5 (lower is better)
Translates to: RQPLGCARYALPHSR*RPLELGPWPGSPTH
Trigger: GTGAGTCGGGGACCCCGGCCAGGGTCCCAGCTCTAGCGGGCGCCAGCGTGAGTGTGGGAGCGCGTAGCGCGCGCACCCGAGCGGCTGCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp ACCTCCGGGGCACTCGGGTCCCGGGCGGCGGCAGGAATGCAGGAATaGGCACAGGCTGTGGGCGGCCAGGAGGGAGTCCCGGCGCCTGCC +
Preference number: 5 (lower is better)
Translates to: TSGALGSRAAAGMQE*AQAVGGQEGVPAPA
Trigger: GGCAGGCGCCGGGACTCCCTCCTGGCCGCCCACAGCCTGTGCGCATTCCTGCATTCCTGCCGCCGCCCGGGACCCGAGTGCCCCGGAGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409087.3
CDS GCA 90 bp TGGCTCGGCCTCAAAGCCGGCGGGAGGCTACGCTCAGCCCCGCGCTaGACGCCTCATTGTTTCGGGCAGCGCGGCGGCGGCTCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: WLGLKAGGRLRSAPR*TPHCFGQRGGGSRG
Trigger: GCCGCGGGAGCCGCCGCCGCGCTGCCCGAAACAATGAGGCGTGCAGCGCGGGGCTGAGCGTAGCCTCCCGCCGGCTTTGAGGCCGAGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp GCCGCAGGCTCGAGTCCTCCTCCTGCCACCGTGGGGTCTCGGAGCTaGCCCGCGCTCCCGTCCCAGGCGGCCTGCGGGATCACCTCTCCG +
Preference number: 5 (lower is better)
Translates to: AAGSSPPPATVGSRS*PALPSQAACGITSP
Trigger: CGGAGAGGTGATCCCGCAGGCCGCCTGGGACGGGAGCGCGGGGCAGCTCCGAGACCCCACGGTGGCAGGAGGAGGACTCGAGCCTGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp GCCTGGACACCTCCGGGGCACTCGGGTCCCGGGCGGCGGCAGGAATaGAGGAATGCGCACAGGCTGTGGGCGGCCAGGAGGGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: AWTPPGHSGPGRRQE*RNAHRLWAARRESR
Trigger: CCGGGACTCCCTCCTGGCCGCCCACAGCCTGTGCGCATTCCTGCATTCCTGCCGCCGCCCGGGACCCGAGTGCCCCGGAGGTGTCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409087.3
CDS GCA 90 bp GGAACTTGGGGGCTGCAGAAGGCGAGTGCGCGGCGGGAGTCGTCCTaGCGCAGGCTCGAGTCCTCCTCCTGCCACCGTGGGGTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: GTWGLQKASARRESS*RRLESSSCHRGVSE
Trigger: CTCCGAGACCCCACGGTGGCAGGAGGAGGACTCGAGCCTGCGGCAGGACGACTCCCGCCGCGCACTCGCCTTCTGCAGCCCCCAAGTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp TCTTCCCACGCCGCGCCTCGAAGCGCACGACACCGTGGTGCTCGGTaGTCCCCCTGGCAGCGCGGCACTGGAGTCCAAGGCGTGCGTGTC +
Preference number: 5 (lower is better)
Translates to: SSHAAPRSARHRGAR*SPWQRGTGVQGVRV
Trigger: GACACGCACGCCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGCGTGGGAAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp CCAGCCTTCTTCCCACGCCGCGCCTCGAAGCGCACGACACCGTGGTaGTCGGTGCTCCCCCTGGCAGCGCGGCACTGGAGTCCAAGGCGT +
Preference number: 5 (lower is better)
Translates to: PAFFPRRASKRTTPW*SVLPLAARHWSPRR
Trigger: ACGCCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGCGTGGGAAGAAGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS TCA 90 bp CCATCTTGGGACTGGGCCCATTTCTGCAGGTCTCCAGGCCCCGCATaGAAGGAACCGGCTGGGTGGGCGCGGGGCAGCGCCTGGCGTGCG +
Preference number: 5 (lower is better)
Translates to: PSWDWAHFCRSPGPA*KEPAGWARGSAWRA
Trigger: CGCACGCCAGGCGCTGCCCCGCGCCCACCCAGCCGGTTCCTTTCATGCGGGGCCTGGAGACCTGCAGAAATGGGCCCAGTCCCAAGATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 90 bp GAACCAGCCTTCTTCCCACGCCGCGCCTCGAAGCGCACGACACCGTaGTGCTCGGTGCTCCCCCTGGCAGCGCGGCACTGGAGTCCAAGG +
Preference number: 5 (lower is better)
Translates to: EPAFFPRRASKRTTP*CSVLPLAARHWSPR
Trigger: CCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGCGTGGGAAGAAGGCTGGTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp TCCAAGGCGTGCGTGTCACATTTTATTCCCCGGCAGCCGCTCGGGTaGGCGCGCTACGCGCTCCCACACTCACGCTGGCGCCCGCTAGAG +
Preference number: 5 (lower is better)
Translates to: SKACVSHFIPRQPLG*ARYALPHSRWRPLE
Trigger: CTCTAGCGGGCGCCAGCGTGAGTGTGGGAGCGCGTAGCGCGCGCACCCGAGCGGCTGCCGGGGAATAAAATGTGACACGCACGCCTTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 90 bp GCCGCGCCTCGAAGCGCACGACACCGTGGTGCTCGGTGCTCCCCCTaGCAGCGCGGCACTGGAGTCCAAGGCGTGCGTGTCACATTTTAT +
Preference number: 5 (lower is better)
Translates to: AAPRSARHRGARCSP*QRGTGVQGVRVTFY
Trigger: ATAAAATGTGACACGCACGCCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 90 bp CCGTCGTCGCCCTCCTCCAACACGTGGCTCCTTCTCTGCCTCCGGTaGCTCTTCTTCACCCGCCTCCTCTGGACCTGTGCAGCCGGAAAA +
Preference number: 5 (lower is better)
Translates to: PSSPSSNTWLLLCLR*LFFTRLLWTCAAGK
Trigger: TTTTCCGGCTGCACAGGTCCAGAGGAGGCGGGTGAAGAAGAGGCACCGGAGGCAGAGAAGGAGCCACGTGTTGGAGGAGGGCGACGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 90 bp CAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTTGCCCTTGCGATaGAAATCCCCCTGCGTGCCCATGTTCAGGCGCTGCACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: QCTAWKPGRTTLPLR*KSPCVPMFRRCTRS
Trigger: GCTCCTGGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 90 bp CAGGGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTTGCCCTTaGGATGCAAATCCCCCTGCGTGCCCATGTTCAGGCGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: QGSAPPGSREEPPCP*DANPPACPCSGAAP
Trigger: TGGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 90 bp TTGGTGCAGGGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTTaGCCTTGCGATGCAAATCCCCCTGCGTGCCCATGTTCAGGCGCT +
Preference number: 5 (lower is better)
Translates to: LVQGSAPPGSREEPP*PCDANPPACPCSGA
Trigger: AGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 90 bp AAGAGACGTTCCCCTTCCAGAGCCGGTACAGGAAGGCCCTGGACATaGAGGAGTACAGCCTGTCGCCGTCGTCGCCCTCCTCCAACACGT +
Preference number: 5 (lower is better)
Translates to: KRRSPSRAGTGRPWT*RSTACRRRRPPPTR
Trigger: ACGTGTTGGAGGAGGGCGACGACGGCGACAGGCTGTACTCCTCCATGTCCAGGGCCTTCCTGTACCGGCTCTGGAAGGGGAACGTCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 90 bp ATGAGAATCTATTTCCTCGCCCAAGGAAGAGTTGAGGATTGCGCCTaGAGACATGACGACAGCGCAGCTGCGCAGGCCGCGGGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: MRIYFLAQGRVEDCA*RHDDSAAAQAAGVQ
Trigger: CTGCACCCCCGCGGCCTGCGCAGCTGCGCTGTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGAGGAAATAGATTCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 90 bp CGCATCATGAGAATCTATTTCCTCGCCCAAGGAAGAGTTGAGGATTaGGCCTGCAGACATGACGACAGCGCAGCTGCGCAGGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: RIMRIYFLAQGRVED*ACRHDDSAAAQAAG
Trigger: CCCCGCGGCCTGCGCAGCTGCGCTGTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGAGGAAATAGATTCTCATGATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 90 bp AGCCGGGAAGAACCACCTTGCCCTTGCGATGCAAATCCCCCTGCGTaGCCATGTTCAGGCGCTGCACCAGGAGCTTCTCATAGAGTAGTG +
Preference number: 5 (lower is better)
Translates to: SREEPPCPCDANPPA*PCSGAAPGASHRVV
Trigger: CACTACTCTATGAGAAGCTCCTGGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 90 bp TCAGGTAATCCTTCATCGCCTTCTGCAGGCGCGGGTTCAGCATTTTaGAAGAGACGTTCCCCTTCCAGAGCCGGTACAGGAAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: SGNPSSPSAGAGSAF*KRRSPSRAGTGRPW
Trigger: CCAGGGCCTTCCTGTACCGGCTCTGGAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCGCCTGCAGAAGGCGATGAAGGATTACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAATCGCCCAAGGAAGAGTaGAGGATTGCGCCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLESPKEE*RIAPAD
Trigger: GTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGA...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACCGGGAAGAACCACCTaGCCCTTGCGATGCAAATCC +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEPGRTT*PLRCKS
Trigger: GGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCTCACGCCGCGGAACTaGGGGGCTGCAGAAGGCGAG +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLLTPRN*GAAEGE
Trigger: CTCGCCTTCTGCAGCCCCCAAGTTCCGCGGCGTGAG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 90 bp GTAGTACAGCTCGTGGTAGTGGCACAGCTCCGTCTGCCGCACGGATaGGATATATTCATACACGTGCACCTCTCTGCACATGGACATCAT +
Preference number: 5 (lower is better)
Translates to: VVQLVVVAQLRLPHG*DIFIHVHLSAHGHH
Trigger: ATGATGTCCATGTGCAGAGAGGTGCACGTGTATGAATATATCCCATCCGTGCGGCAGACGGAGCTGTGCCACTACCACGAGCTGTACTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACGCGGGTTCAGCATTTaGGAAGAGACGTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLERGFSI*EETFPF
Trigger: GAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGCGCTGCACGCCTCATaGTTTCGGGCAGCGCGGCGG +
Preference number: 5 (lower is better)
Translates to: SVSMICPAELTGSYTCKRALHAS*FRAARR
Trigger: CCGCCGCGCTGCCCGAAACAATGAGGCGTGCAGCGC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 90 bp TTGATTCCCAAGAAACCCTTTTTAAGAGTGTGGAATGACTGGACTTaGTGCAGGGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTT +
Preference number: 5 (lower is better)
Translates to: LIPKKPFLRVWNDWT*CRAVHRLEAGKNHL
Trigger: AAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGGTTTCTTGGGAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 90 bp AGGAGCCCCCAAGCGAATATTCCGAAAAGCATTCGTTGTCTCCATTaGTTCAAGTGTGGTTTCATGGCAGGTCTCTGCGGTCAGCACCTT +
Preference number: 5 (lower is better)
Translates to: RSPQANIPKSIRCLH*FKCGFMAGLCGQHL
Trigger: AAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGAATATTCGCTTGGGGGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
ENST00000419159.2
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAATGTTCAAACCCATCTaGGGACTGGGCCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEMFKPI*GLGPFL
Trigger: CAGAAATGGGCCCAGTCCCAAGATGGGTTTGAACAT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAACTGGAGAGTCCAGGATaGATTAAGTGTCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLELESPG*IKCLAE
Trigger: CTCAGCCAGACACTTAATCAATCCTGGACTCTCCAG...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CCA 90 bp GTACCTTATTGCACATTGATTCCCAAGAAACCCTTTTTAAGAGTGTaGAATGACTGGACTTGGTGCAGGGCAGTGCACCGCCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: VPYCTLIPKKPFLRV*NDWTWCRAVHRLEA
Trigger: GGCTTCCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS GCA 90 bp TGGCACAGCTCCGTCTGCCGCACGGATGGGATATATTCATACACGTaGACCTCTCTGCACATGGACATCATTATGAGGATTCCAATGAAA +
Preference number: 5 (lower is better)
Translates to: WHSSVCRTDGIYSYT*TSLHMDIIMRIPMK
Trigger: TTTCATTGGAATCCTCATAATGATGTCCATGTGCAGAGAGGTGCACGTGTATGAATATATCCCATCCGTGCGGCAGACGGAGCTGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 90 bp TTCCGAAAAGCATTCGTTGTCTCCATTGCTTCAAGTGTGGTTTCATaGCAGGTCTCTGCGGTCAGCACCTTGTGTCTTAATGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: FRKAFVVSIASSVVS*QVSAVSTLCLNADG
Trigger: CCCATCTGCATTAAGACACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
ENST00000419159.2
CDS CCA 90 bp TCATCTTATTGCACATTGATTCCCAAGAAACCCTTTTTAAGAGTGTaGAATGACTGGACTTGGTGCAGGGCAGTGCACCGCCTGGAAGCC +
Preference number: 5 (lower is better)
Translates to: SSYCTLIPKKPFLRV*NDWTWCRAVHRLEA
Trigger: GGCTTCCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGGTTTCTTGGGAATCAATGTGCAATAAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361803.3
CDS CCA 90 bp AGCGAATATTCCGAAAAGCATTCGTTGTCTCCATTGCTTCAAGTGTaGTTTCATGGCAGGTCTCTGCGGTCAGCACCTTGTGTCTTAATG +
Preference number: 5 (lower is better)
Translates to: SEYSEKHSLSPLLQV*FHGRSLRSAPCVLM
Trigger: CATTAAGACACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGAATATTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
ENST00000419159.2
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAGGTGCTATATGGAATTaGGCTTTTTCTTGGACCTTT +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEGAIWN*AFSWTF
Trigger: AAAGGTCCAAGAAAAAGCCAAATTCCATATAGCACC...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCGCGGGTTCAGCATTTaGGAAGAGACGTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSRGFSI*EETFPF
Trigger: GAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAAAGAACCACCTTGCCCTaGCGATGCAAATCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: QESSPENSLEETNPETKKRTTLP*RCKSPC
Trigger: GCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCT...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTGTGATTCTATGTTACTaGCCAGTGATGTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLVILCY*PVMCLL
Trigger: CAGGAGGCACATCACTGGCAAGTAACATAGAATCAC...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACAATCTTTCCTTCTAGTTaGGAAGGAGCAAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTIFPSS*EGARCL
Trigger: GAGACACCTTGCTCCTTCCAAACTAGAAGGAAAGAT...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp TGTCTGGCTGAGAGACCAAGAGGACCAGACACATGGGAAGTGCTGTTTCTCGAAAAGCTGCTATTGTCATaGCAACAAGTCTTAACTGTA +
Preference number: 5 (lower is better)
Translates to: CLAERPRGPDTWEVLFLEKLLLS*QQVLTV
Trigger: TACAGTTAAGACTTGTTGCAATGACAATAGCAGCTT...TTCGAGAAACAGCACTTCCCATGTGTCTGGTCCTCTTGGTCTCTCAGCCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCCAGATGGAGTTGCCTaGATCAGTCATGTAACCACT +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLPDGVA*ISHVTT
Trigger: AGTGGTTACATGACTGATCAAGGCAACTCCATCTGG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS TCA 90 bp CAGGCCACCAAAATGACGTCTTTATACAGTGAACTGTCAATGAAGTaGTGGCTGGGGTTGGTCAGAATCTGCGAATTAATGATGCGTATG +
Preference number: 5 (lower is better)
Translates to: QATKMTSLYSELSMK*WLGLVRICELMMRM
Trigger: CATACGCATCATTAATTCGCAGATTCTGACCAACCCCAGCCATCACTTCATTGACAGTTCACTGTATAAAGACGTCATTTTGGTGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTCTGCGGTCAGCACCTaGTGTCTTAATGCAGATGGG +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSSAVST*CLNADG
Trigger: CCCATCTGCATTAAGACACAAGGTGCTGACCGCAGA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTTCGCCCAAGGAAGAGTaGAGGATTGCGCCTGCAGAC +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCSPKEE*RIAPAD
Trigger: GTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGA...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCCGGGAAGAACCACCTaGCCCTTGCGATGCAAATCC +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCPGRTT*PLRCKS
Trigger: GGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCTCTGTAAGCCATTCTaGCTCAAGAAAGTAGTCCTG +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLLCKPF*LKKVVL
Trigger: CAGGACTACTTTCTTGAGCAAGAATGGCTTACAGAG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTCATTCGTTGTCTCCATaGCTTCAAGTGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLHSLSP*LQVWFH
Trigger: ATGAAACCACACTTGAAGCAATGGAGACAACGAATG...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTATGTTCAAACCCATCTaGGGACTGGGCCCATTTCTG +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSMFKPI*GLGPFL
Trigger: CAGAAATGGGCCCAGTCCCAAGATGGGTTTGAACAT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCGGGTAGAAAGCACTTaGAGATTTTCTCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSRVEST*RFSPHL
Trigger: CAGGTGGGGAGAAAATCTCAAAGTGCTTTCTACCCG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCTGGAGAGTCCAGGATaGATTAAGTGTCTGGCTGAG +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLESPG*IKCLAE
Trigger: CTCAGCCAGACACTTAATCAATCCTGGACTCTCCAG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACGGGTAGAAAGCACTTaGAGATTTTCTCCCCACCTG +
Preference number: 5 (lower is better)
Translates to: QESSPENSLEETNPETKKRVEST*RFSPHL
Trigger: CAGGTGGGGAGAAAATCTCAAAGTGCTTTCTACCCG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAGATGGTGGGTTTGGTaGAATCTTCTCTTTAGTGTT +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLRWWVW*NLLFSV
Trigger: AACACTAAAGAGAAGATTCAACCAAACCCACCATCT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACATGGGTTCTGAGGCTTTaGAACTTGAATATTTACACT +
Preference number: 5 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTWVLRL*NLNIYT
Trigger: AGTGTAAATATTCAAGTTCAAAAGCCTCAGAACCCA...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATTAATTGACCATCCCTaGGTCCTGAGCACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: SVSMICPAELTGSYTCKRLIDHP*VLSTKF
Trigger: GAACTTTGTGCTCAGGACCAAGGGATGGTCAATTAA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAGAACCTGGGAGAAATTCAGTGAGCTGCCACTTACTGTTAACTACTCCACACACATGTACTGTGTGTaGATCTATAAGAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: DRTWEKFSELPLTVNYSTHMYCV*IYKKNW
Trigger: CCAGTTTTTCTTATAGATCAACACACAGTACATGTG...TGTGGAGTAGTTAACAGTAAGTGGCAGCTCACTGAATTTCTCCCAGGTTCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS TCA 90 bp ATCATTATGAGGATTCCAATGAAACCAGAAGATGGTGGGTTTGGTTaGATCTTCTCTTTAGTGTTCTCCTGGATAATATCCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: IIMRIPMKPEDGGFG*IFSLVFSWIISQSC
Trigger: GCAGCTCTGGGATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTCATAATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CCA 90 bp GGACATCATTATGAGGATTCCAATGAAACCAGAAGATGGTGGGTTTaGTTGAATCTTCTCTTTAGTGTTCTCCTGGATAATATCCCAGAG +
Preference number: 5 (lower is better)
Translates to: GHHYEDSNETRRWWV*LNLLFSVLLDNIPE
Trigger: CTCTGGGATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTCATAATGATGTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGACATTCGTTGTCTCCATaGCTTCAAGTGTGGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SVSMICPAELTGSYTCKRHSLSP*LQVWFH
Trigger: ATGAAACCACACTTGAAGCAATGGAGACAACGAATG...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTCCGAAAAGCATTCGTaGTCTCCATTGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSSEKHS*SPLLQV
Trigger: CACTTGAAGCAATGGAGACAACGAATGCTTTTCGGA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGATGTAAAATGGCTGATTaGGGTTTCTCTGACGATGCT +
Preference number: 5 (lower is better)
Translates to: SVSMICPAELTGSYTCKRCKMAD*GFSDDA
Trigger: AGCATCGTCAGAGAAACCCAAATCAGCCATTTTACA...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTAACAGTAGTACCTTATaGCACATTGATTCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLNSSTL*HIDSQE
Trigger: TTCTTGGGAATCAATGTGCAATAAGGTACTACTGTT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTTGGCAGAAGAATAAGTaGTTAACATTTCTGGAGGTA +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLWQKNK*LTFLEV
Trigger: TACCTCCAGAAATGTTAACAACTTATTCTTCTGCCA...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACACCAAAACCTGTCATaGAAACCAACCCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: QESSPENSLEETNPETKKHQNLS*KPTLMR
Trigger: CCTCATCAGGGTTGGTTTCAATGACAGGTTTTGGTG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGCACAGCTGTGCCAATaGTCAAGTGTGTCACTGACT +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCAQLCQ*SSVSLT
Trigger: AGTCAGTGACACACTTGACAATTGGCACAGCTGTGC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTATCTTTCCTTCTAGTTaGGAAGGAGCAAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSIFPSS*EGARCL
Trigger: GAGACACCTTGCTCCTTCCAAACTAGAAGGAAAGAT...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTTTAATTGACCATCCCTaGGTCCTGAGCACAAAGTTC +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLIDHP*VLSTKF
Trigger: GAACTTTGTGCTCAGGACCAAGGGATGGTCAATTAA...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AACAAAGGGCCTCCTCTGTGGTGCTATATGGAATTTGGCTTTTTCTTGGACCTTACCAATGCAATTTCTTaGTTTCCAATCTACCTAGCA +
Preference number: 5 (lower is better)
Translates to: NKGPPLWCYMEFGFFLDLTNAIS*FPIYLA
Trigger: TGCTAGGTAGATTGGAAACAAAGAAATTGCATTGGT...AAGGTCCAAGAAAAAGCCAAATTCCATATAGCACCACAGAGGAGGCCCTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS TCA 90 bp ATTTTTACAAATGAGCCAATGAAACCAGAAGATGGTGGGTTTGGTTaGATCTTCTCTTTAGTGTTCTCCTGGATAATATCCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: IFTNEPMKPEDGGFG*IFSLVFSWIISQSC
Trigger: GCAGCTCTGGGATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGCTCATTTGTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409087.3
CDS-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGTACCTTATTGCACATaGATTCCCAAGAAACCCTTT +
Preference number: 5 (lower is better)
Translates to: SVSMICPAELTGSYTCKRVPYCT*IPKKPF
Trigger: AAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTAC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AGCGTAAGTATGATCTGTCCAGCAGAATTAACTGGCTCATACACATGTAAGAGAGAATTTGGCTTTTTCTaGGACCTTTCAAGATGGATG +
Preference number: 5 (lower is better)
Translates to: SVSMICPAELTGSYTCKREFGFF*DLSRWM
Trigger: CATCCATCTTGAAAGGTCCAAGAAAAAGCCAAATTC...TCTCTTACATGTGTATGAGCCAGTTAATTCTGCTGGACAGATCATACTTACGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTGTGATTCTATGTTACTaGCCAGTGATGTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCVILCY*PVMCLL
Trigger: CAGGAGGCACATCACTGGCAAGTAACATAGAATCAC...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTGCTATAGGAGATGTCTaGTTTTCCAGCTCCATATCT +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSAIGDV*FSSSIS
Trigger: AGATATGGAGCTGGAAAACAAGACATCTCCTATAGC...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp GACAAGTTGAAACTCAGGGACATTTTACCCAAGCAATTAATTTCCAGATGGAGTCTGAGGCTTTTGAACTaGAATATTTACACTGACCCC +
Preference number: 5 (lower is better)
Translates to: DKLKLRDILPKQLISRWSLRLLN*NIYTDP
Trigger: GGGGTCAGTGTAAATATTCAAGTTCAAAAGCCTCAG...ACTCCATCTGGAAATTAATTGCTTGGGTAAAATGTCCCTGAGTTTCAACTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCCAGATGGAGTTGCCTaGATCAGTCATGTAACCACT +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCPDGVA*ISHVTT
Trigger: AGTGGTTACATGACTGATCAAGGCAACTCCATCTGG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTTCCGAAAAGCATTCGTaGTCTCCATTGCTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCSEKHS*SPLLQV
Trigger: CACTTGAAGCAATGGAGACAACGAATGCTTTTCGGA...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACCACTTAGGACCCATTaGGCTAATACTAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: QESSPENSLEETNPETKKPLRTH*ANTRSS
Trigger: ACTACTTCTAGTATTAGCCAAATGGGTCCTAAGTGG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTTGTAAAATGGCTGATTaGGGTTTCTCTGACGATGCT +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCCKMAD*GFSDDA
Trigger: AGCATCGTCAGAGAAACCCAAATCAGCCATTTTACA...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTCCACTTAGGACCCATTaGGCTAATACTAGAAGTAGT +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCPLRTH*ANTRSS
Trigger: ACTACTTCTAGTATTAGCCAAATGGGTCCTAAGTGG...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAATACAATAGAACATACTaGGAAGCTACCTGGCCAATA +
Preference number: 5 (lower is better)
Translates to: QESSPENSLEETNPETKKYNRTY*EATWPI
Trigger: TATTGGCCAGGTAGCTTCCAAGTATGTTCTATTGTA...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CCA 90 bp AATATCCCAGAGCTGCCATATAAATTTAGGATGAAGAATGTAAAATaGCTGATTTGGGTTTCTCTGACGATGCTGAATATATGGAGTGAA +
Preference number: 5 (lower is better)
Translates to: NIPELPYKFRMKNVK*LIWVSLTMLNIWSE
Trigger: TTCACTCCATATATTCAGCATCGTCAGAGAAACCCAAATCAGCCATTTTACATTCTTCATCCTAAATTTATATGGCAGCTCTGGGATATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTAGATGGTGGGTTTGGTaGAATCTTCTCTTTAGTGTT +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCRWWVW*NLLFSV
Trigger: AACACTAAAGAGAAGATTCAACCAAACCCACCATCT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp CAAGAAAGTAGTCCTGAGAACAGTCTAGAAGAAACCAATCCTGAAACAAAGAAACACATGTACTGTGTGTaGATCTATAAGAAAAACTGG +
Preference number: 5 (lower is better)
Translates to: QESSPENSLEETNPETKKHMYCV*IYKKNW
Trigger: CCAGTTTTTCTTATAGATCAACACACAGTACATGTG...TTTCTTTGTTTCAGGATTGGTTTCTTCTAGACTGTTCTCAGGACTACTTTCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS GCA 90 bp TTCAAGTATTCTTTTGTGACTTTGAGTACAACAGTAGTACCTTATTaGACATTGATTCCCAAGAAACCCTTTTTAAGAGTGTGGAATGAC +
Preference number: 5 (lower is better)
Translates to: FKYSFVTLSTTVVPY*TLIPKKPFLRVWND
Trigger: GTCATTCCACACTCTTAAAAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTACTACTGTTGTACTCAAAGTCACAAAAGAATACTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTTGGGTTCTGAGGCTTTaGAACTTGAATATTTACACT +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCWVLRL*NLNIYT
Trigger: AGTGTAAATATTCAAGTTCAAAAGCCTCAGAACCCA...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS-3UTR CAA 90 bp AATGTTTCTAAACATAAACCACTTCATATGGTCAGGAACATCACCAAAACCTGTACCAATGCAATTTCTTaGTTTCCAATCTACCTAGCA +
Preference number: 5 (lower is better)
Translates to: NVSKHKPLHMVRNITKTCTNAIS*FPIYLA
Trigger: TGCTAGGTAGATTGGAAACAAAGAAATTGCATTGGT...ACAGGTTTTGGTGATGTTCCTGACCATATGAAGTGGTTTATGTTTAGAAACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CCA 72 bp CGGCAGCTGCAAGCGCGGGCGGCGGGGCACAGCGGGTaGCTCGGCCTCAAAGCCGGCGGGAGGCTACGCTCA +
Preference number: 6 (lower is better)
Translates to: RQLQARAAGHSG*LGLKAGGRLRS
Trigger: TGAGCGTAGCCTCCCGCCGGCTTTGAGGCCGAGCCACCCGCTGTGCCCCGCCGCCCGCGCTTGCAGCTGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 72 bp CTCGGGTGCGCGCGCTACGCGCTCCCACACTCACGCTaGCGCCCGCTAGAGCTGGGACCCTGGCCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: LGCARYALPHSR*RPLELGPWPGS
Trigger: GGACCCCGGCCAGGGTCCCAGCTCTAGCGGGCGCCAGCGTGAGTGTGGGAGCGCGTAGCGCGCGCACCCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CAA 72 bp CGGGAGGCTACGCTCAGCCCCGCGCTGCACGCCTCATaGTTTCGGGCAGCGCGGCGGCGGCTCCCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: REATLSPALHAS*FRAARRRLPRP
Trigger: TGGCCGCGGGAGCCGCCGCCGCGCTGCCCGAAACAATGAGGCGTGCAGCGCGGGGCTGAGCGTAGCCTCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp CCTCCGGGGCACTCGGGTCCCGGGCGGCGGCAGGAATaGAGGAATGCGCACAGGCTGTGGGCGGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PPGHSGPGRRQE*RNAHRLWAARR
Trigger: CCTCCTGGCCGCCCACAGCCTGTGCGCATTCCTGCATTCCTGCCGCCGCCCGGGACCCGAGTGCCCCGGAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409087.3
CDS GCA 72 bp TCGAGTCCTCCTCCTGCCACCGTGGGGTCTCGGAGCTaGCCCGCGCTCCCGTCCCAGGCGGCCTGCGGGATC +
Preference number: 6 (lower is better)
Translates to: SSPPPATVGSRS*PALPSQAACGI
Trigger: GATCCCGCAGGCCGCCTGGGACGGGAGCGCGGGGCAGCTCCGAGACCCCACGGTGGCAGGAGGAGGACTCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp CGGGAGTCGTCCTGCCGCAGGCTCGAGTCCTCCTCCTaGCACCGTGGGGTCTCGGAGCTGCCCCGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: RESSCRRLESSS*HRGVSELPRAP
Trigger: GGGAGCGCGGGGCAGCTCCGAGACCCCACGGTGGCAGGAGGAGGACTCGAGCCTGCGGCAGGACGACTCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 72 bp GTCCTGCCGCAGGCTCGAGTCCTCCTCCTGCCACCGTaGGGTCTCGGAGCTGCCCCGCGCTCCCGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: VLPQARVLLLPP*GLGAAPRSRPR
Trigger: CCTGGGACGGGAGCGCGGGGCAGCTCCGAGACCCCACGGTGGCAGGAGGAGGACTCGAGCCTGCGGCAGGAC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CAA 90 bp CAAAGCCGGCGGGAGGCTACGCTCAGCCCCGCGCTGCACGCCTCATaGTTTCGGGCAGCGCGGCGGCGGCTCCCGCGGCCAGAGGAACCG +
Preference number: 6 (lower is better)
Translates to: QSRREATLSPALHAS*FRAARRRLPRPEEP
Trigger: CGGTTCCTCTGGCCGCGGGAGCCGCCGCCGCGCTGCCCGAAACAATGAGGCGTGCAGCGCGGGGCTGAGCGTAGCCTCCCGCCGGCTTTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp CTCAAAGCCGGCGGGAGGCTACGCTCAGCCCCGCGCTaGACGCCTCATTGTTTCGGGCAGCGCGGCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LKAGGRLRSAPR*TPHCFGQRGGG
Trigger: GCCGCCGCCGCGCTGCCCGAAACAATGAGGCGTGCAGCGCGGGGCTGAGCGTAGCCTCCCGCCGGCTTTGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp GGGCTGCAGAAGGCGAGTGCGCGGCGGGAGTCGTCCTaGCGCAGGCTCGAGTCCTCCTCCTGCCACCGTGGG +
Preference number: 6 (lower is better)
Translates to: GLQKASARRESS*RRLESSSCHRG
Trigger: CCCACGGTGGCAGGAGGAGGACTCGAGCCTGCGGCAGGACGACTCCCGCCGCGCACTCGCCTTCTGCAGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp GCCGCGCCTCGAAGCGCACGACACCGTGGTGCTCGGTaGTCCCCCTGGCAGCGCGGCACTGGAGTCCAAGGC +
Preference number: 6 (lower is better)
Translates to: AAPRSARHRGAR*SPWQRGTGVQG
Trigger: GCCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 72 bp CCACACTCACGCTGGCGCCCGCTAGAGCTGGGACCCTaGCCGGGGTCCCCGACTCACGCCGCGGAACTTGGG +
Preference number: 6 (lower is better)
Translates to: PHSRWRPLELGP*PGSPTHAAELG
Trigger: CCCAAGTTCCGCGGCGTGAGTCGGGGACCCCGGCCAGGGTCCCAGCTCTAGCGGGCGCCAGCGTGAGTGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp GGGGAGGGCTCATGTGCGGCGCCCATGATGGCCCGCTaGTTCCCCTGCACCGGCAGGAGCCTCCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GEGSCAAPMMAR*FPCTGRSLLVS
Trigger: GGAGACCAGGAGGCTCCTGCCGGTGCAGGGGAAGCAGCGGGCCATCATGGGCGCCGCACATGAGCCCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 72 bp TTCCCACGCCGCGCCTCGAAGCGCACGACACCGTGGTaGTCGGTGCTCCCCCTGGCAGCGCGGCACTGGAGT +
Preference number: 6 (lower is better)
Translates to: FPRRASKRTTPW*SVLPLAARHWS
Trigger: ACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGCGTGGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 72 bp TTCTTCCCACGCCGCGCCTCGAAGCGCACGACACCGTaGTGCTCGGTGCTCCCCCTGGCAGCGCGGCACTGG +
Preference number: 6 (lower is better)
Translates to: FFPRRASKRTTP*CSVLPLAARHW
Trigger: CCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCGAGGCGCGGCGTGGGAAGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CCA 72 bp CGAAGCGCACGACACCGTGGTGCTCGGTGCTCCCCCTaGCAGCGCGGCACTGGAGTCCAAGGCGTGCGTGTC +
Preference number: 6 (lower is better)
Translates to: RSARHRGARCSP*QRGTGVQGVRV
Trigger: GACACGCACGCCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGGTGTCGTGCGCTTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS GCA 72 bp TCATGTGCGGCGCCCATGATGGCCCGCTGCTTCCCCTaGACCGGCAGGAGCCTCCTGGTCTCCAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SCAAPMMARCFP*TGRSLLVSRKE
Trigger: CTCCTTCCTGGAGACCAGGAGGCTCCTGCCGGTGCAGGGGAAGCAGCGGGCCATCATGGGCGCCGCACATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 72 bp TGCGTGTCACATTTTATTCCCCGGCAGCCGCTCGGGTaGGCGCGCTACGCGCTCCCACACTCACGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: CVSHFIPRQPLG*ARYALPHSRWR
Trigger: GCGCCAGCGTGAGTGTGGGAGCGCGTAGCGCGCGCACCCGAGCGGCTGCCGGGGAATAAAATGTGACACGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CAA 90 bp GCAGGGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTTGCCCTaGCGATGCAAATCCCCCTGCGTGCCCATGTTCAGGCGCTGCACC +
Preference number: 6 (lower is better)
Translates to: AGQCTAWKPGRTTLP*RCKSPCVPMFRRCT
Trigger: GGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 72 bp TCCCCTTCCAGAGCCGGTACAGGAAGGCCCTGGACATaGAGGAGTACAGCCTGTCGCCGTCGTCGCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SPSRAGTGRPWT*RSTACRRRRPP
Trigger: AGGAGGGCGACGACGGCGACAGGCTGTACTCCTCCATGTCCAGGGCCTTCCTGTACCGGCTCTGGAAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 72 bp CCTCCCGCTTCCCGCGGAAGCGCACCCCGTGCTTGTTaGCGGTCAGGTAATCCTTCATCGCCTTCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: PPASRGSAPRAC*RSGNPSSPSAG
Trigger: GCCTGCAGAAGGCGATGAAGGATTACCTGACCGCCAACAAGCACGGGGTGCGCTTCCGCGGGAAGCGGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 72 bp CCGTGGTGCTCGGTGCTCCCCCTGGCAGCGCGGCACTaGAGTCCAAGGCGTGCGTGTCACATTTTATTCCCC +
Preference number: 6 (lower is better)
Translates to: PWCSVLPLAARH*SPRRACHILFP
Trigger: GGGGAATAAAATGTGACACGCACGCCTTGGACTCCAGTGCCGCGCTGCCAGGGGGAGCACCGAGCACCACGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CAA 72 bp GGGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTaGCCCTTGCGATGCAAATCCCCCTGCGTGCCCATG +
Preference number: 6 (lower is better)
Translates to: GQCTAWKPGRTT*PLRCKSPCVPM
Trigger: CATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CAA 90 bp CTTGGTGCAGGGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTaGCCCTTGCGATGCAAATCCCCCTGCGTGCCCATGTTCAGGCGC +
Preference number: 6 (lower is better)
Translates to: LGAGQCTAWKPGRTT*PLRCKSPCVPMFRR
Trigger: GCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 72 bp GCCTGGAAGCCGGGAAGAACCACCTTGCCCTTGCGATaGAAATCCCCCTGCGTGCCCATGTTCAGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AWKPGRTTLPLR*KSPCVPMFRRC
Trigger: GCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 72 bp GCACCGCCTGGAAGCCGGGAAGAACCACCTTGCCCTTaGGATGCAAATCCCCCTGCGTGCCCATGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: APPGSREEPPCP*DANPPACPCSG
Trigger: GCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 72 bp GGCAGTGCACCGCCTGGAAGCCGGGAAGAACCACCTTaGCCTTGCGATGCAAATCCCCCTGCGTGCCCATGT +
Preference number: 6 (lower is better)
Translates to: GSAPPGSREEPP*PCDANPPACPC
Trigger: ACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 72 bp AGACGTTCCCCTTCCAGAGCCGGTACAGGAAGGCCCTaGACATGGAGGAGTACAGCCTGTCGCCGTCGTCGC +
Preference number: 6 (lower is better)
Translates to: RRSPSRAGTGRP*TWRSTACRRRR
Trigger: GCGACGACGGCGACAGGCTGTACTCCTCCATGTCCAGGGCCTTCCTGTACCGGCTCTGGAAGGGGAACGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 72 bp GGAATGACTGGACTTGGTGCAGGGCAGTGCACCGCCTaGAAGCCGGGAAGAACCACCTTGCCCTTGCGATGC +
Preference number: 6 (lower is better)
Translates to: GMTGLGAGQCTA*KPGRTTLPLRC
Trigger: GCATCGCAAGGGCAAGGTGGTTCTTCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 72 bp TATTTCCTCGCCCAAGGAAGAGTTGAGGATTGCGCCTaGAGACATGACGACAGCGCAGCTGCGCAGGCCGCG +
Preference number: 6 (lower is better)
Translates to: YFLAQGRVEDCA*RHDDSAAAQAA
Trigger: CGCGGCCTGCGCAGCTGCGCTGTCGTCATGTCTGCAGGCGCAATCCTCAACTCTTCCTTGGGCGAGGAAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS GCA 72 bp GGAAGAACCACCTTGCCCTTGCGATGCAAATCCCCCTaGGTGCCCATGTTCAGGCGCTGCACCAGGAGCTTC +
Preference number: 6 (lower is better)
Translates to: GRTTLPLRCKSP*VPMFRRCTRSF
Trigger: GAAGCTCCTGGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS GCA 72 bp GAACCACCTTGCCCTTGCGATGCAAATCCCCCTGCGTaGCCATGTTCAGGCGCTGCACCAGGAGCTTCTCAT +
Preference number: 6 (lower is better)
Translates to: EPPCPCDANPPA*PCSGAAPGASH
Trigger: ATGAGAAGCTCCTGGTGCAGCGCCTGAACATGGGCACGCAGGGGGATTTGCATCGCAAGGGCAAGGTGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 72 bp CCTTCATCGCCTTCTGCAGGCGCGGGTTCAGCATTTTaGAAGAGACGTTCCCCTTCCAGAGCCGGTACAGGA +
Preference number: 6 (lower is better)
Translates to: PSSPSAGAGSAF*KRRSPSRAGTG
Trigger: TCCTGTACCGGCTCTGGAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCGCCTGCAGAAGGCGATGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CAA 72 bp TCCTTCATCGCCTTCTGCAGGCGCGGGTTCAGCATTTaGGAAGAGACGTTCCCCTTCCAGAGCCGGTACAGG +
Preference number: 6 (lower is better)
Translates to: SFIAFCRRGFSI*EETFPFQSRYR
Trigger: CCTGTACCGGCTCTGGAAGGGGAACGTCTCTTCCAAAATGCTGAACCCGCGCCTGCAGAAGGCGATGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 72 bp CTCGTGGTAGTGGCACAGCTCCGTCTGCCGCACGGATaGGATATATTCATACACGTGCACCTCTCTGCACAT +
Preference number: 6 (lower is better)
Translates to: LVVVAQLRLPHG*DIFIHVHLSAH
Trigger: ATGTGCAGAGAGGTGCACGTGTATGAATATATCCCATCCGTGCGGCAGACGGAGCTGTGCCACTACCACGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CCA 72 bp AAGAAACCCTTTTTAAGAGTGTGGAATGACTGGACTTaGTGCAGGGCAGTGCACCGCCTGGAAGCCGGGAAG +
Preference number: 6 (lower is better)
Translates to: KKPFLRVWNDWT*CRAVHRLEAGK
Trigger: CTTCCCGGCTTCCAGGCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CAA 90 bp GAGGAGCCCCCAAGCGAATATTCCGAAAAGCATTCGTTGTCTCCATaGCTTCAAGTGTGGTTTCATGGCAGGTCTCTGCGGTCAGCACCT +
Preference number: 6 (lower is better)
Translates to: EEPPSEYSEKHSLSP*LQVWFHGRSLRSAP
Trigger: AGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGAATATTCGCTTGGGGGCTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
ENST00000419159.2
CDS CAA 72 bp AGTGTGGTTTCATGGCAGGTCTCTGCGGTCAGCACCTaGTGTCTTAATGCAGATGGGTGGCAGAATGAACCT +
Preference number: 6 (lower is better)
Translates to: SVVSWQVSAVST*CLNADGWQNEP
Trigger: AGGTTCATTCTGCCACCCATCTGCATTAAGACACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000419159.2
CDS CAA 72 bp AGTGTGGTTTCATGGCAGGTCTCTGCGGTCAGCACCTaGTGTCTTAATGCAGATGGGTGGCAGAATGAACCA +
Preference number: 6 (lower is better)
Translates to: SVVSWQVSAVST*CLNADGWQNEP
Trigger: TGGTTCATTCTGCCACCCATCTGCATTAAGACACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS CAA 90 bp ATTGCTTCAAGTGTGGTTTCATGGCAGGTCTCTGCGGTCAGCACCTaGTGTCTTAATGCAGATGGGTGGCAGAATGAACCAGCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: IASSVVSWQVSAVST*CLNADGWQNEPAFF
Trigger: GAAGAAGGCTGGTTCATTCTGCCACCCATCTGCATTAAGACACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409382.7
CDS TCA 72 bp AGGGTCCCAGGCCACCAAAATGACGTCTTTATACAGTaGACTGTCAATGAAGTGATGGCTGGGGTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: RVPGHQNDVFIQ*TVNEVMAGVGQ
Trigger: CTGACCAACCCCAGCCATCACTTCATTGACAGTTCACTGTATAAAGACGTCATTTTGGTGGCCTGGGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS CCA 72 bp TCCGAAAAGCATTCGTTGTCTCCATTGCTTCAAGTGTaGTTTCATGGCAGGTCTCTGCGGTCAGCACCTTGT +
Preference number: 6 (lower is better)
Translates to: SEKHSLSPLLQV*FHGRSLRSAPC
Trigger: ACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
ENST00000419159.2
CDS CCA 72 bp TGCACATTGATTCCCAAGAAACCCTTTTTAAGAGTGTaGAATGACTGGACTTGGTGCAGGGCAGTGCACCGC +
Preference number: 6 (lower is better)
Translates to: CTLIPKKPFLRV*NDWTWCRAVHR
Trigger: GCGGTGCACTGCCCTGCACCAAGTCCAGTCATTCCACACTCTTAAAAAGGGTTTCTTGGGAATCAATGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CAA 72 bp GAGGAGCCCCCAAGCGAATATTCCGAAAAGCATTCGTaGTCTCCATTGCTTCAAGTGTGGTTTCATGGCAGG +
Preference number: 6 (lower is better)
Translates to: EEPPSEYSEKHS*SPLLQVWFHGR
Trigger: CCTGCCATGAAACCACACTTGAAGCAATGGAGACAACGAATGCTTTTCGGAATATTCGCTTGGGGGCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
ENST00000419159.2
CDS CAA 90 bp ATTGCTTCAAGTGTGGTTTCATGGCAGGTCTCTGCGGTCAGCACCTaGTGTCTTAATGCAGATGGGTGGCAGAATGAACCTTTACTGAGC +
Preference number: 6 (lower is better)
Translates to: IASSVVSWQVSAVST*CLNADGWQNEPLLS
Trigger: GCTCAGTAAAGGTTCATTCTGCCACCCATCTGCATTAAGACACAAGGTGCTGACCGCAGAGACCTGCCATGAAACCACACTTGAAGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419159.2
CDS GCA 72 bp TCCGTCTGCCGCACGGATGGGATATATTCATACACGTaGACCTCTCTGCACATGGACATCATTATGAGGATT +
Preference number: 6 (lower is better)
Translates to: SVCRTDGIYSYT*TSLHMDIIMRI
Trigger: AATCCTCATAATGATGTCCATGTGCAGAGAGGTGCACGTGTATGAATATATCCCATCCGTGCGGCAGACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000361803.3
ENST00000409382.7
CDS CAA 90 bp CATCATTATGAGGATTCCAATGAAACCAGAAGATGGTGGGTTTGGTaGAATCTTCTCTTTAGTGTTCTCCTGGATAATATCCCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: HHYEDSNETRRWWVW*NLLFSVLLDNIPEL
Trigger: CAGCTCTGGGATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTCATAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS TCA 72 bp AAAATGACGTCTTTATACAGTGAACTGTCAATGAAGTaGTGGCTGGGGTTGGTCAGAATCTGCGAATTAATG +
Preference number: 6 (lower is better)
Translates to: KMTSLYSELSMK*WLGLVRICELM
Trigger: CATTAATTCGCAGATTCTGACCAACCCCAGCCATCACTTCATTGACAGTTCACTGTATAAAGACGTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361686.8
ENST00000409087.3
ENST00000409382.7
CDS TCA 72 bp AGGATTCCAATGAAACCAGAAGATGGTGGGTTTGGTTaGATCTTCTCTTTAGTGTTCTCCTGGATAATATCC +
Preference number: 6 (lower is better)
Translates to: RIPMKPEDGGFG*IFSLVFSWIIS
Trigger: GGATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS TCA 72 bp AATGAGCCAATGAAACCAGAAGATGGTGGGTTTGGTTaGATCTTCTCTTTAGTGTTCTCCTGGATAATATCC +
Preference number: 6 (lower is better)
Translates to: NEPMKPEDGGFG*IFSLVFSWIIS
Trigger: GGATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGCTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409087.3
CDS CCA 72 bp GGACATCATTATGAGGATTCCAATGAAACCAGAAGATaGTGGGTTTGGTTGAATCTTCTCTTTAGTGTTCTC +
Preference number: 6 (lower is better)
Translates to: GHHYEDSNETRR*WVWLNLLFSVL
Trigger: GAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTCATAATGATGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CAA 72 bp GAGGATTCCAATGAAACCAGAAGATGGTGGGTTTGGTaGAATCTTCTCTTTAGTGTTCTCCTGGATAATATC +
Preference number: 6 (lower is better)
Translates to: EDSNETRRWWVW*NLLFSVLLDNI
Trigger: GATATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CCA 72 bp TATGAGGATTCCAATGAAACCAGAAGATGGTGGGTTTaGTTGAATCTTCTCTTTAGTGTTCTCCTGGATAAT +
Preference number: 6 (lower is better)
Translates to: YEDSNETRRWWV*LNLLFSVLLDN
Trigger: ATTATCCAGGAGAACACTAAAGAGAAGATTCAACCAAACCCACCATCTTCTGGTTTCATTGGAATCCTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CAA 90 bp TATTCTTTTGTGACTTTGAGTACAACAGTAGTACCTTATTGCACATaGATTCCCAAGAAACCCTTTTTAAGAGTGTGGAATGACTGGACT +
Preference number: 6 (lower is better)
Translates to: YSFVTLSTTVVPYCT*IPKKPFLRVWNDWT
Trigger: AGTCCAGTCATTCCACACTCTTAAAAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTACTACTGTTGTACTCAAAGTCACAAAAGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7
CDS CAA 72 bp TTCTTTTGTGACTTTGAGTACAACAGTAGTACCTTATaGCACATTGATTCCCAAGAAACCCTTTTTAAGAGT +
Preference number: 6 (lower is better)
Translates to: FFCDFEYNSSTL*HIDSQETLFKS
Trigger: ACTCTTAAAAAGGGTTTCTTGGGAATCAATGTGCAATAAGGTACTACTGTTGTACTCAAAGTCACAAAAGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361686.8
ENST00000409382.7